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Conserved domains on  [gi|16129021|ref|NP_415576|]
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DUF2770 domain-containing protein YceO [Escherichia coli str. K-12 substr. MG1655]

Protein Classification

YceO family protein( domain architecture ID 10567058)

YceO family protein similar to Escherichia coli protein YceO which contains a DUF2770 domain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2770 pfam10968
Protein of unknown function (DUF2770); Members in this family of proteins are annotated as ...
 10-45 2.55e-07

Protein of unknown function (DUF2770); Members in this family of proteins are annotated as yceO however currently no function is known.


:

Pssm-ID: 431565  Cd Length: 36  Bit Score: 41.23  E-value: 2.55e-07
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 16129021   10 MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFY 45
Cdd:pfam10968  1 MRRLFHYLINNIREHFMLYLILWSLLAIMDLVYLWF 36
 
Name Accession Description Interval E-value
DUF2770 pfam10968
Protein of unknown function (DUF2770); Members in this family of proteins are annotated as ...
 10-45 2.55e-07

Protein of unknown function (DUF2770); Members in this family of proteins are annotated as yceO however currently no function is known.


Pssm-ID: 431565  Cd Length: 36  Bit Score: 41.23  E-value: 2.55e-07
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 16129021   10 MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFY 45
Cdd:pfam10968  1 MRRLFHYLINNIREHFMLYLILWSLLAIMDLVYLWF 36
 
Name Accession Description Interval E-value
DUF2770 pfam10968
Protein of unknown function (DUF2770); Members in this family of proteins are annotated as ...
 10-45 2.55e-07

Protein of unknown function (DUF2770); Members in this family of proteins are annotated as yceO however currently no function is known.


Pssm-ID: 431565  Cd Length: 36  Bit Score: 41.23  E-value: 2.55e-07
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 16129021   10 MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFY 45
Cdd:pfam10968  1 MRRLFHYLINNIREHFMLYLILWSLLAIMDLVYLWF 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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