|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11146 |
PRK11146 |
lipoprotein-releasing ABC transporter permease subunit LolE; |
3-414 |
0e+00 |
|
lipoprotein-releasing ABC transporter permease subunit LolE;
Pssm-ID: 236860 [Multi-domain] Cd Length: 412 Bit Score: 802.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 3 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEAL 82
Cdd:PRK11146 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVNQPFTNWQEAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 83 DHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQ 162
Cdd:PRK11146 81 ARVQKVPGIAAAAPYVNFTGLVENGAKLKAVQVKGVDPQQEQRVSALPSFVQNDAWQNFKAGEQQIILGKGVADALKVKQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 163 GDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG 242
Cdd:PRK11146 161 GDWVTLMIPNSNPDHKLLQPKRVRLQVAGILQLSGQLDHSLALIPLADAQQYLDMGDSVTGIALKVTDVFNANKLVRDAG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 243 EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWY 322
Cdd:PRK11146 241 EVTNSYVYIKSWIGTYGYMYRDIQMIRTIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAILRTLGAKDGLIRAIFVWY 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 323 GLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRA 402
Cdd:PRK11146 321 GLLAGLKGSLIGVVIGVVVSLNLTPIIKGIEKLIGHQFLSGDIYFIDFLPSELHWLDVFYVLVTALVLSLLASWYPARRA 400
|
410
....*....|..
gi 16129081 403 SNIDPARVLSGQ 414
Cdd:PRK11146 401 SKLDPARVLSGQ 412
|
|
| lolE_release |
TIGR02213 |
lipoprotein releasing system, transmembrane protein LolE; This protein is part of an unusual ... |
4-414 |
0e+00 |
|
lipoprotein releasing system, transmembrane protein LolE; This protein is part of an unusual ABC transporter complex that releases lipoproteins from the periplasmic side of the bacterial inner membrane, rather than transport any substrate across the inner membrane. In some species, the permease-like transmembrane protein is represented by two paralogs, LolC and LolE, both in the LolCDE complex. This family consists of LolE, as found in E. coli and related species. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131268 [Multi-domain] Cd Length: 411 Bit Score: 700.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 4 PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALD 83
Cdd:TIGR02213 1 NLPLLIGWRFSRGKQRNPMVSLISKFSTIGIALGVAVLIVGLSAMNGFERELNQRILAVVPHAEIESVPPPIHNWQNLEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 84 HVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQG 163
Cdd:TIGR02213 81 RLQQNPQIKAAAPYVSFTGLVENGSKLKAVQVKGVEPQAEQKVSSIGNFVQEQAWNKFEKGEGQLILGSGVAKELDVKVG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 164 DWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE 243
Cdd:TIGR02213 161 DWVTLLIPQQNGDEKFAQPKRVRVQVTGILRLDGQLDHSYALLPLADAQQYLTYGDQVTGIALKLDDVFNARNLVRSMGN 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 244 VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYG 323
Cdd:TIGR02213 241 DYPQYVYMQSWISKFGYMYRDIQLIRTIMYLAMVLVIGVACFNIVSTLIMAVKDKQGDIAILRTLGANDGLIKRIFVWYG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 324 LLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRAS 403
Cdd:TIGR02213 321 LQAGMKGSLIGIVLGVIVALNLTTFIQGIEWVIGHQFLSGDIYFVDFLPSELHWLDVLMVLVTALALSLMASWYPASRAA 400
|
410
....*....|.
gi 16129081 404 NIDPARVLSGQ 414
Cdd:TIGR02213 401 KLQPAQVLSSH 411
|
|
| LolE |
COG4591 |
ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall ... |
143-413 |
4.08e-55 |
|
ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443648 [Multi-domain] Cd Length: 283 Bit Score: 183.58 E-value: 4.08e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 143 AGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPehklmqpKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSV 221
Cdd:COG4591 31 KASDEVVLGEGLAKKLGLKVGDTITLISPDGSP-------KTRRFTVVGIFESGGyELDGSLVYVPLETAQELLGLGDQV 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 222 SGIALKMTDVFNANKLVRDAGEVTNSYvYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
Cdd:COG4591 104 SGILVKLKDGADAEAVAAALEAALPGL-EVKTWRELNAALFSALKTEKLILLLILLLILLVAAFNIVNTLLMSVLERTRE 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIeklighqflssdIYFIDFLPSELHWLDVF 381
Cdd:COG4591 183 IGILKALGASRRQIRRIFLLEGLLLGLIGGLLGLLLGLLLALLLNALLGIL------------LPFIFALPVSLSPSDVL 250
|
250 260 270
....*....|....*....|....*....|..
gi 16129081 382 YVLVTALLLSLLASWYPARRASNIDPARVLSG 413
Cdd:COG4591 251 LALLLALLISLLASLYPARRAARLDPVEALRG 282
|
|
| MacB_PCD |
pfam12704 |
MacB-like periplasmic core domain; This family represents the periplasmic core domain found in ... |
27-244 |
1.77e-08 |
|
MacB-like periplasmic core domain; This family represents the periplasmic core domain found in a variety of ABC transporters. The structure of this family has been solved for the MacB protein. Some structural similarity was found to the periplasmic domain of the AcrB multidrug efflux transporter.
Pssm-ID: 463676 [Multi-domain] Cd Length: 211 Bit Score: 54.46 E-value: 1.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 27 SVISTIGIALGVAVLIVGLSAMNGFER------ELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPgIAAAAPYINF 100
Cdd:pfam12704 1 TALTVLGIAIGVAAVIAILSLGDGLLSavpeqiSDSDNLVVVQPGAAGGGGTRPPLSDPDAEALRRAVP-VEAVAPVVST 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 101 TGLVESGANlRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQ---GDWVSImipnsnpeh 177
Cdd:pfam12704 80 VRYGNSTTE-RLVTVVGVDPDFFKVFGLPLAEGRFFTEADVLGGPNVVVLGESLAEKLFGGDdpvGKTIRL--------- 149
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16129081 178 klmqpKRVRLHVAGILQ--LSGQLDHSFAMIPLADAQQylDMGSSVSGIALKMTDVFNANKLVRDAGEV 244
Cdd:pfam12704 150 -----NGQPFTVVGVLPdfPGSDGGGDLVYVPLTTLQR--RLGDSVSTILVRLKDGADLAAAAAELRAL 211
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK11146 |
PRK11146 |
lipoprotein-releasing ABC transporter permease subunit LolE; |
3-414 |
0e+00 |
|
lipoprotein-releasing ABC transporter permease subunit LolE;
Pssm-ID: 236860 [Multi-domain] Cd Length: 412 Bit Score: 802.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 3 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEAL 82
Cdd:PRK11146 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVNQPFTNWQEAL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 83 DHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQ 162
Cdd:PRK11146 81 ARVQKVPGIAAAAPYVNFTGLVENGAKLKAVQVKGVDPQQEQRVSALPSFVQNDAWQNFKAGEQQIILGKGVADALKVKQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 163 GDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAG 242
Cdd:PRK11146 161 GDWVTLMIPNSNPDHKLLQPKRVRLQVAGILQLSGQLDHSLALIPLADAQQYLDMGDSVTGIALKVTDVFNANKLVRDAG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 243 EVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWY 322
Cdd:PRK11146 241 EVTNSYVYIKSWIGTYGYMYRDIQMIRTIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAILRTLGAKDGLIRAIFVWY 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 323 GLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRA 402
Cdd:PRK11146 321 GLLAGLKGSLIGVVIGVVVSLNLTPIIKGIEKLIGHQFLSGDIYFIDFLPSELHWLDVFYVLVTALVLSLLASWYPARRA 400
|
410
....*....|..
gi 16129081 403 SNIDPARVLSGQ 414
Cdd:PRK11146 401 SKLDPARVLSGQ 412
|
|
| lolE_release |
TIGR02213 |
lipoprotein releasing system, transmembrane protein LolE; This protein is part of an unusual ... |
4-414 |
0e+00 |
|
lipoprotein releasing system, transmembrane protein LolE; This protein is part of an unusual ABC transporter complex that releases lipoproteins from the periplasmic side of the bacterial inner membrane, rather than transport any substrate across the inner membrane. In some species, the permease-like transmembrane protein is represented by two paralogs, LolC and LolE, both in the LolCDE complex. This family consists of LolE, as found in E. coli and related species. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131268 [Multi-domain] Cd Length: 411 Bit Score: 700.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 4 PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALD 83
Cdd:TIGR02213 1 NLPLLIGWRFSRGKQRNPMVSLISKFSTIGIALGVAVLIVGLSAMNGFERELNQRILAVVPHAEIESVPPPIHNWQNLEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 84 HVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQG 163
Cdd:TIGR02213 81 RLQQNPQIKAAAPYVSFTGLVENGSKLKAVQVKGVEPQAEQKVSSIGNFVQEQAWNKFEKGEGQLILGSGVAKELDVKVG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 164 DWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE 243
Cdd:TIGR02213 161 DWVTLLIPQQNGDEKFAQPKRVRVQVTGILRLDGQLDHSYALLPLADAQQYLTYGDQVTGIALKLDDVFNARNLVRSMGN 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 244 VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYG 323
Cdd:TIGR02213 241 DYPQYVYMQSWISKFGYMYRDIQLIRTIMYLAMVLVIGVACFNIVSTLIMAVKDKQGDIAILRTLGANDGLIKRIFVWYG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 324 LLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRAS 403
Cdd:TIGR02213 321 LQAGMKGSLIGIVLGVIVALNLTTFIQGIEWVIGHQFLSGDIYFVDFLPSELHWLDVLMVLVTALALSLMASWYPASRAA 400
|
410
....*....|.
gi 16129081 404 NIDPARVLSGQ 414
Cdd:TIGR02213 401 KLQPAQVLSSH 411
|
|
| lolCE |
TIGR02212 |
lipoprotein releasing system, transmembrane protein, LolC/E family; This model describes the ... |
4-414 |
0e+00 |
|
lipoprotein releasing system, transmembrane protein, LolC/E family; This model describes the LolC protein, and its paralog LolE found in some species. These proteins are homologous to permease proteins of ABC transporters. In some species, two paralogs occur, designated LolC and LolE. In others, a single form is found and tends to be designated LolC. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 274034 [Multi-domain] Cd Length: 411 Bit Score: 549.19 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 4 PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEALD 83
Cdd:TIGR02212 1 PLSLFIALRYLRAKRRNRFVSFISLFSIIGIALGVAALIVVLSVMNGFERELLQRILGVIPHAIIESKQNPIIDWQELLE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 84 HVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQG 163
Cdd:TIGR02212 81 RILKNPGVKAAAPIVSGQALVQSAGKVSGVQVRGVDPSDEDKLSAISNNVKQGALKGFKPGEYNIIIGEQLAEKLGVSVG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 164 DWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGE 243
Cdd:TIGR02212 161 DKITLISPESNVTPFGEIPRQKRFTVIGIFSTGGEVDGYLALMPLEDAQRFLRYGDQVTGLRLKLDDPFQADALAQQVEP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 244 VTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYG 323
Cdd:TIGR02212 241 ELGPELYVRDWTDQNGELFSAIQMEKNMMFLILSLIIAVAAFNIVSTLVMAVKDKQGDIAILRTLGATPGQIMRIFIVQG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 324 LLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRAS 403
Cdd:TIGR02212 321 LLIGVIGTLLGVILGVLLALNLTTIINFIEWLIGVKFFNADIYFLDFLPSKLDPLDVLLIIVTALLLSLLATLYPAWRAA 400
|
410
....*....|.
gi 16129081 404 NIDPARVLSGQ 414
Cdd:TIGR02212 401 KLQPAEALRYE 411
|
|
| LolE |
COG4591 |
ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall ... |
143-413 |
4.08e-55 |
|
ABC-type transport system involved in lipoprotein release, permease component LolC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443648 [Multi-domain] Cd Length: 283 Bit Score: 183.58 E-value: 4.08e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 143 AGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPehklmqpKRVRLHVAGILQLSG-QLDHSFAMIPLADAQQYLDMGSSV 221
Cdd:COG4591 31 KASDEVVLGEGLAKKLGLKVGDTITLISPDGSP-------KTRRFTVVGIFESGGyELDGSLVYVPLETAQELLGLGDQV 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 222 SGIALKMTDVFNANKLVRDAGEVTNSYvYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGD 301
Cdd:COG4591 104 SGILVKLKDGADAEAVAAALEAALPGL-EVKTWRELNAALFSALKTEKLILLLILLLILLVAAFNIVNTLLMSVLERTRE 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 302 IAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIeklighqflssdIYFIDFLPSELHWLDVF 381
Cdd:COG4591 183 IGILKALGASRRQIRRIFLLEGLLLGLIGGLLGLLLGLLLALLLNALLGIL------------LPFIFALPVSLSPSDVL 250
|
250 260 270
....*....|....*....|....*....|..
gi 16129081 382 YVLVTALLLSLLASWYPARRASNIDPARVLSG 413
Cdd:COG4591 251 LALLLALLISLLASLYPARRAARLDPVEALRG 282
|
|
| PRK10814 |
PRK10814 |
lipoprotein-releasing ABC transporter permease subunit LolC; |
1-411 |
8.23e-44 |
|
lipoprotein-releasing ABC transporter permease subunit LolC;
Pssm-ID: 182753 [Multi-domain] Cd Length: 399 Bit Score: 157.18 E-value: 8.23e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAvDQPWTNWQE 80
Cdd:PRK10814 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAIITS-EHGSLNPQQ 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 81 ALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSalPSFVQGDAwRNFKAGEQQIIIGKGVADALKV 160
Cdd:PRK10814 80 LPASALKLDGVNRIAPLTTGDVVLQSARSVAVGVMLGIDPAQKDPLT--PYLVNVKQ-TDLQPGKYNVILGEQLAGQLGV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 161 KQGDWVSIMIPNSN---PEHKLmqPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYL--DMGsSVSGIALKMTDVFNAN 235
Cdd:PRK10814 157 KRGDQIRLMVPSASqftPMGRI--PSQRLFTVIGTFAANSEVDGYQMLVNQQDASRLMryPAG-NITGWRLWLDEPLKVD 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 236 KLVRDAgeVTNSYVYiKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLI 315
Cdd:PRK10814 234 SLSQQK--LPEGTVW-KDWRERKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLLVMEKQGEVAILQTQGLTRRQI 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 316 RAIFVWYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLI-GHQflssdiyfidfLPSELHWLDVFYVLVTALLLSLLA 394
Cdd:PRK10814 311 MMVFMVQGASAGIIGALLGALLGALLASQLNNLMPIIGVLLdGAA-----------LPVAIEPLQVIVIALVAMAIALLS 379
|
410
....*....|....*..
gi 16129081 395 SWYPARRASNIDPARVL 411
Cdd:PRK10814 380 TLYPSWRAAATQPAEAL 396
|
|
| SalY |
COG0577 |
ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]; |
27-414 |
4.77e-18 |
|
ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms];
Pssm-ID: 440342 [Multi-domain] Cd Length: 339 Bit Score: 84.56 E-value: 4.77e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 27 SVISTIGIALGVAVLIVGLSAMNGFERELNNRI------LAVVPHGEIEAVDQpwTNWQEALDHVQKVPGIAAAAPYINF 100
Cdd:COG0577 17 SLLTVLGIAIGIALVIAILALGRGLRRSLLRDLdslgfdLLTVSRTPGGSRAT--LSYEDLREALRALPGVESVAPSSSG 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 101 TGLVESGANL-RAIQVKGVNPQQEQRLSAlpSFVQGDAWRN--FKAGEQQIIIGKGVADALKvkqgdwvsimiPNSNPEH 177
Cdd:COG0577 95 SATVRYGGGEpPSVRVLGVDPDYFRVLGI--PLLAGRFFTAadDLGAPPVVVIGEALARRLF-----------GGEDPVG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 178 KLMQPKRVRLHVAGILQlsgqldhsfamiplADAQQYLDmgssvsgiALKMTDVFNanklVRDAGEVTNSYvyikswigt 257
Cdd:COG0577 162 KTIRLNGRPFTVVGVVE--------------AELRALLR--------RRDPGDDFE----VQTLDEILAAL--------- 206
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 258 ygymYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVII 337
Cdd:COG0577 207 ----YGVLRTLTLLLGAIAGLALLVACIGIMNLMLASVTERTREIGIRKALGASRRDILRQFLTEALLLALLGGLLGLLL 282
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16129081 338 GVVVSLqltpiieWIEKLIGhqflssdiyfidfLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVLSGQ 414
Cdd:COG0577 283 ALLLLR-------LLAALLG-------------LPVSLDPWVLLLALALSLLVGLLAGLYPARRAARLDPVEALRSE 339
|
|
| YbbP |
COG3127 |
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease ... |
133-411 |
5.75e-11 |
|
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442361 [Multi-domain] Cd Length: 830 Bit Score: 64.44 E-value: 5.75e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 133 VQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIpnsnpehklmQPKRVRLHVAGILQLS-GQLDHSFAMI----P 207
Cdd:COG3127 582 VAGEWWPALDAGEPLVSVEEGLAERLGLKLGDTLTFNV----------AGREVTATVTSLRKVDwDSMRPNFFVVfspgA 651
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 208 LADAQQyldmgSSVSGIALKMTDVFNA-NKLVRDAGEVTNsyVYIKSWIGTYgymyRDI--QMIRAIMYLA-MVLVIGVA 283
Cdd:COG3127 652 LEGAPA-----TYITSFYLPPAAEAALlRALVRAFPNVTV--IDVDAILDQV----RDIldQVSLAVEFLAgFALLAGLL 720
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 284 CfnIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAI----FVWYGLLAGLFGSLCGVIIGVVVSLQLtpiiewieklighq 359
Cdd:COG3127 721 V--LAAALAASRDERTREAALLRTLGASRRQLRRAlaleFALLGLLAGLLAALLAELAGWALARFV-------------- 784
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 16129081 360 flssdiyfidF-LPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
Cdd:COG3127 785 ----------FdLPFSPPWWLWLAGLLGGALLVLLAGLLGARRVLRQPPLEVL 827
|
|
| MacB_PCD |
pfam12704 |
MacB-like periplasmic core domain; This family represents the periplasmic core domain found in ... |
27-244 |
1.77e-08 |
|
MacB-like periplasmic core domain; This family represents the periplasmic core domain found in a variety of ABC transporters. The structure of this family has been solved for the MacB protein. Some structural similarity was found to the periplasmic domain of the AcrB multidrug efflux transporter.
Pssm-ID: 463676 [Multi-domain] Cd Length: 211 Bit Score: 54.46 E-value: 1.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 27 SVISTIGIALGVAVLIVGLSAMNGFER------ELNNRILAVVPHGEIEAVDQPWTNWQEALDHVQKVPgIAAAAPYINF 100
Cdd:pfam12704 1 TALTVLGIAIGVAAVIAILSLGDGLLSavpeqiSDSDNLVVVQPGAAGGGGTRPPLSDPDAEALRRAVP-VEAVAPVVST 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 101 TGLVESGANlRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQ---GDWVSImipnsnpeh 177
Cdd:pfam12704 80 VRYGNSTTE-RLVTVVGVDPDFFKVFGLPLAEGRFFTEADVLGGPNVVVLGESLAEKLFGGDdpvGKTIRL--------- 149
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16129081 178 klmqpKRVRLHVAGILQ--LSGQLDHSFAMIPLADAQQylDMGSSVSGIALKMTDVFNANKLVRDAGEV 244
Cdd:pfam12704 150 -----NGQPFTVVGVLPdfPGSDGGGDLVYVPLTTLQR--RLGDSVSTILVRLKDGADLAAAAAELRAL 211
|
|
| YbbP |
COG3127 |
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease ... |
269-411 |
8.72e-07 |
|
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442361 [Multi-domain] Cd Length: 830 Bit Score: 51.34 E-value: 8.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 269 RAIMYLAMVLVIG--VACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQLT 346
Cdd:COG3127 251 RAEQFLLLVALLAllLAGVAVANAARRYVARRLDTIALLRCLGASRRQIFRIYLLQLLLLGLLGSLLGLLLGALLQALLA 330
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16129081 347 PIIEwieklighqflssdiyfiDFLPSEL----HWLDVFYVLVTALLLSLLASWYPARRASNIDPARVL 411
Cdd:COG3127 331 ALLA------------------DLLPVPLepalSPLPLLLGLLVGLLVLLLFALPPLLRLRRVPPLRVL 381
|
|
| FtsX |
pfam02687 |
FtsX-like permease family; This is a family of predicted permeases and hypothetical ... |
273-407 |
1.09e-06 |
|
FtsX-like permease family; This is a family of predicted permeases and hypothetical transmembrane proteins. Swiss:P57382 has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both Swiss:P57382 and Swiss:O54500 have been shown to require ATP. This region contains three transmembrane helices.
Pssm-ID: 460652 [Multi-domain] Cd Length: 120 Bit Score: 47.25 E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 273 YLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVvvslqltpiiewi 352
Cdd:pfam02687 1 ILFSLLILLLAVLIILLLLSISISERRREIGILRALGASRKQIFKLLLLEALLIGLIGLVIGLLLGL------------- 67
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 16129081 353 ekLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPARRASNIDP 407
Cdd:pfam02687 68 --LLAKLIAILLYSSGISLPILVPPLSILIALLLALLIALLASLLPALRIRKINP 120
|
|
| FtsX |
COG2177 |
Cell division protein FtsX [Cell cycle control, cell division, chromosome partitioning]; |
265-350 |
2.40e-06 |
|
Cell division protein FtsX [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 441780 [Multi-domain] Cd Length: 292 Bit Score: 48.67 E-value: 2.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16129081 265 IQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCGVIIGVVVSLQ 344
Cdd:COG2177 163 LNLLRLVGLVLAALLLLAAVLLIGNTIRLAIYSRREEIEIMKLVGATDGFIRRPFLLEGALLGLLGGLLALLLLALLYLL 242
|
....*.
gi 16129081 345 LTPIIE 350
Cdd:COG2177 243 LVSALA 248
|
|
| |
