|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
1-1037 |
0e+00 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 2235.45 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 1 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
Cdd:PRK10555 1 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 81 QSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS 160
Cdd:PRK10555 81 QSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 161 NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL 240
Cdd:PRK10555 161 NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 241 QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHG 320
Cdd:PRK10555 241 QTPEQFRDITLRVNQDGSEVTLGDVATVELGAEKYDYLSRFNGKPASGLGVKLASGANEMATAKLVLNRLDELAQYFPHG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 321 LEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVL 400
Cdd:PRK10555 321 LEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSINTLTMFAMVL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 401 AIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL 480
Cdd:PRK10555 401 AIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVSAMVL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 481 SVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPT 560
Cdd:PRK10555 481 SVLVAMILTPALCATLLKPLKKGEHHGQKGFFGWFNRMFNRNAERYEKGVAKILHRSLRWILIYVLLLGGMVFLFLRLPT 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 561 SFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSKT 640
Cdd:PRK10555 561 SFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFTHEKDNVMSVFATVGSGPGGNGQNVARMFIRLKDWDERDSKT 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 641 GTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLD 720
Cdd:PRK10555 641 GTSFAIIERATKAFNKIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAKNPELTRVRHNGLD 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 721 DSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPFS 800
Cdd:PRK10555 721 DSPQLQIDIDQRKAQALGVSIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPFS 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 801 AFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLL 880
Cdd:PRK10555 801 AFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLL 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 881 VVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEA 960
Cdd:PRK10555 881 VVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEA 960
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16130395 961 TLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFPLKPRPE 1037
Cdd:PRK10555 961 TLHASRQRLRPILMTSLAFIFGVLPMATSTGAGSGSQHAVGTGVMGGMISATILAIFFVPLFFVLVRRRFPLKPRPE 1037
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
1-1037 |
0e+00 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 1878.66 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 1 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
Cdd:TIGR00915 1 MAKFFIDRPIFAWVIAIIIMLAGTLSILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 81 QSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS 160
Cdd:TIGR00915 81 SSDSDGSMTITLTFEQGTDPDIAQVQVQNKLQLATPLLPQEVQRQGVRVEKASSNFLMVIGLVSDDGSMTKEDLSDYAAS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 161 NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL 240
Cdd:TIGR00915 161 NMVDPLSRLEGVGDVQLFGSQYAMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGQLGGLPAVPGQQLNATIIAQTRL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 241 QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHG 320
Cdd:TIGR00915 241 QTPEQFENILLKVNTDGSQVRLKDVARVELGGENYSISARFNGKPASGLAIKLATGANALDTAKAVKAELAVLEPFFPQG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 321 LEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVL 400
Cdd:TIGR00915 321 MKYVYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFAMVL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 401 AIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL 480
Cdd:TIGR00915 401 AIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 481 SVLVAMILTPALCATLLKPLKKGEHHGQK-GFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLP 559
Cdd:TIGR00915 481 SVLVALILTPALCATMLKPIEKGEHHEKKgGFFGWFNRMFDSSTHGYENGVGKILRRRGRYLLVYVLLVGGMVFLFVRLP 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 560 TSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSK 639
Cdd:TIGR00915 561 TSFLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLAKEKANVESVFTVNGFSFAGRGQNMGMAFIRLKDWEERTGK 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 640 TGTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGL 719
Cdd:TIGR00915 641 ENSVFAIAGRATGHFMQIKDAMVIAFVPPAILELGNATGFDFFLQDRAGLGHEALLQARNQLLGLAAQNPALTRVRPNGL 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 720 DDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPF 799
Cdd:TIGR00915 721 EDEPQLKIDIDREKAQALGVSIADINTTLSTAWGSSYVNDFIDRGRVKRVYVQAEEDARMSPEDINKWYVRNASGEMVPF 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 800 SAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISL 879
Cdd:TIGR00915 801 SAFATVRWEYGSPQLERYNGLPSMEILGSAAPGVSTGQAMAAMEAIAQKLPPGFGFSWTGMSYEERLSGSQAPALYALSL 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 880 LVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFE 959
Cdd:TIGR00915 881 LVVFLCLAALYESWSIPVSVMLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAKELMAQGKSIVE 960
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16130395 960 ATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFPLKPRPE 1037
Cdd:TIGR00915 961 AALEAARLRLRPILMTSLAFILGVVPLAISTGAGSGSQHAIGTGVFGGMVTATVLAIFFVPLFYVVVRRLFKRKAHEK 1038
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
1-1033 |
0e+00 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 1554.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 1 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
Cdd:PRK15127 1 MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 81 QSSGTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS 160
Cdd:PRK15127 81 NSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 161 NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL 240
Cdd:PRK15127 161 NMKDPISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVINAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 241 QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHG 320
Cdd:PRK15127 241 TSTEEFGKILLKVNQDGSRVRLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 321 LEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVL 400
Cdd:PRK15127 321 LKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 401 AIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL 480
Cdd:PRK15127 401 AIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 481 SVLVAMILTPALCATLLKPLKKGEH-HGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLP 559
Cdd:PRK15127 481 SVLVALILTPALCATMLKPIAKGDHgEGKKGFFGWFNRMFEKSTHHYTDSVGNILRSTGRYLVLYLIIVVGMAYLFVRLP 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 560 TSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSK 639
Cdd:PRK15127 561 SSFLPDEDQGVFLTMVQLPAGATQERTQKVLNEVTDYYLTKEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGE 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 640 TGTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPE-LTRVRHNG 718
Cdd:PRK15127 641 ENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLGEAAKHPDmLVGVRPNG 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 719 LDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVP 798
Cdd:PRK15127 721 LEDTPQFKIDIDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVP 800
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 799 FSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAIS 878
Cdd:PRK15127 801 FSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEELASKLPTGVGYDWTGMSYQERLSGNQAPALYAIS 880
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 879 LLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANE-MNQKGHDL 957
Cdd:PRK15127 881 LIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDlMDKEGKGL 960
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16130395 958 FEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFPLK 1033
Cdd:PRK15127 961 IEATLEAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVRRRFSRK 1036
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
1-1027 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 1477.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 1 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 81 QSSgTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS 160
Cdd:pfam00873 81 QSS-YGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGVQRPGISVIKTSLGPIMVLAVTSPDGSYTQTDLRDYADT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 161 NIQDPLSRVNGVGDIDAYG-SQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLggtpsvDKQALNATINAQSL 239
Cdd:pfam00873 160 NIKPQLSRVPGVGDVQLFGgSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQL------EGQGLQALIRAQGQ 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 240 LQTPEQFRDITLRvNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPH 319
Cdd:pfam00873 234 LQSAEDFEKIIVK-NQDGSPVRLRDVATVELGSELYRGFATFNGKPAVGLGVQKLPGANAIETADAVRAKLAELKPTFPQ 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 320 GLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMV 399
Cdd:pfam00873 313 GVEIVVVYDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIPAIAIPLSLLGTFAVMKAFGFSINTLTLGGLV 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 400 LAIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMV 479
Cdd:pfam00873 393 LAIGLVVDDAIVVVENIERVLEENGLKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGRIFRQFAITIVLAIL 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 480 LSVLVAMILTPALCATLLKPLKKGEHHgqkGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLP 559
Cdd:pfam00873 473 LSVLVALTLTPALCATLLKPRREPKHG---GFFRWFNRMFDRLTRGYAKLLAKVLRHTAVVLLVALLLVVGSVWLFVRIP 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 560 TSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYftHEKDNIMSVFATVGSGPGG--NGQNVARMFIRLKDWSERD 637
Cdd:pfam00873 550 TEFLPEEDEGVFVTSAQLPPGVSLDQTQRVMKQVEKIL--KEKPEVESVFAVTGFAFSGdnNGPNSGDAFISLKPWKERP 627
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 638 SKTGTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDMELQD-HAGAGHDALMAARNQLLALAAENPELTRVRH 716
Cdd:pfam00873 628 GPEKSVQALIERLRKALKQIPGANVFLFQPIQLRGLGTISGFRSDLQVkIFGDDLDALDEARNQILAALAQLPGLSDVRS 707
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 717 NGLDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGM 796
Cdd:pfam00873 708 DGQEDQPQLQVNIDREKAARLGVSIQDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYVRNPYGKM 787
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 797 VPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQ--LPNGFGLEWTAMSYQERLSGAQAPAL 874
Cdd:pfam00873 788 IPLSAFAKIEWGYGPPSINRYNGFRSIVISGNVAAGDSLGDAMEAMAQIAKQvkLPPGYGYTWTGQFEQEQLAGNSLPIL 867
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 875 YAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMN-QK 953
Cdd:pfam00873 868 IALALLVVFLVLAALYESWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELReQE 947
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 16130395 954 GHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVR 1027
Cdd:pfam00873 948 GKSLEEAILEACRLRLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVFYVLFH 1021
|
|
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
1-1030 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 1280.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 1 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
Cdd:COG0841 3 LSRFFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYITS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 81 QSSgTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDgsMDKQDIADYVAS 160
Cdd:COG0841 83 TSS-EGSSSITVEFELGTDIDEALVDVQNAVDRARSDLPEDVEPPGVTKVNPSDFPVMVLALSSDD--LDELELSDYAER 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 161 NIQDPLSRVNGVGDIDAYGS-QYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGtpsvdkQALNATINAQSL 239
Cdd:COG0841 160 NIKDRLERVPGVGQVQIFGGrEREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGG------GDREYTVRTNGR 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 240 LQTPEQFRDITLRVNqDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPH 319
Cdd:COG0841 234 LKTPEEFENIVIRTN-DGSVVRLGDVARVEDGAEDYRSIARLNGKPAVGLAIQKQPGANALEVADAVRAKLEELQASLPE 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 320 GLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMV 399
Cdd:COG0841 313 GVELTIVYDQSEFIRASIEEVVKTLLEAILLVVLVVFLFLRSWRATLIPAVAIPVSLIGTFAVMYLLGFSLNILTLFALV 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 400 LAIGLLVDDAIVVVENVERIMsEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMV 479
Cdd:COG0841 393 LAIGIVVDDAIVVVENIERHM-EEGLSPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQLFRQFALTVAIALL 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 480 LSVLVAMILTPALCATLLKPlkkGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLP 559
Cdd:COG0841 472 ISLFVALTLTPALCARLLKP---HPKGKKGRFFRAFNRGFDRLTRGYGRLLRWALRHRKLTLLVALALLALSVLLFGRLP 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 560 TSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYftHEKDNIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSk 639
Cdd:COG0841 549 TEFFPEEDQGQIIVSVQLPPGTSLERTEAVVRQVEEIL--LEVPEVESVFSVVGFSGGGSGSNSGTIFVTLKPWDERDR- 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 640 tgTSFAIIERATKAFNQIKEARVIASSPPAiSGLGSSAGFDMELQdhaGAGHDALMAARNQLLALAAENPELTRVRHNGL 719
Cdd:COG0841 626 --SADEIIARLREKLAKIPGARVFVFQPPA-GGLGSGAPIEVQLQ---GDDLEELAAAAEKLLAALRQIPGLVDVRSDLQ 699
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 720 DDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPF 799
Cdd:COG0841 700 LGKPELQLDIDREKAAALGVTVADVASTLRAALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENLYVRTPDGEMVPL 779
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 800 SAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQ--LPNGFGLEWTAMSYQERLSGAQAPALYAI 877
Cdd:COG0841 780 SSVATIEEGTGPSSINRYNGQRSVTVSANLAPGVSLGEALAAIEELAAElkLPPGVSIEFTGQAEEEQESFSSLGLAFLL 859
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 878 SLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDL 957
Cdd:COG0841 860 ALLLVYLVLAAQFESFIQPLIILLTVPLALIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFANQLREEGMSL 939
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 16130395 958 FEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRF 1030
Cdd:COG0841 940 REAILEAARLRLRPILMTSLATILGLLPLALGTGAGAEFRQPLGIAVIGGLLFSTLLTLFVVPVLYVLLDRLR 1012
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
1-1036 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 1222.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 1 MANFFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSS 80
Cdd:PRK09577 1 MARFFIDRPVFAWVISLFIMLGGIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 81 QSSgTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVAS 160
Cdd:PRK09577 81 TSS-AGQASLSLTFKQGVNADLAAVEVQNRLKTVEARLPEPVRRDGIQVEKAADNIQLIVSLTSDDGRLTGVELGEYASA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 161 NIQDPLSRVNGVGDIDAYGSQYSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGTPSVDKQALNATINAQSLL 240
Cdd:PRK09577 160 NVLQALRRVEGVGKVQFWGAEYAMRIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIGRSAVPDSAPIAATVFADAPL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 241 QTPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHG 320
Cdd:PRK09577 240 KTPEDFGAIALRARADGSALYLRDVARIEFGGNDYNYPSYVNGKTATGMGIKLAPGSNAVATEKRVRATMDELSRYFPPG 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 321 LEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVL 400
Cdd:PRK09577 320 VKYQIPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIPTLVVPVALLGTFGVMLAAGFSINVLTMFGMVL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 401 AIGLLVDDAIVVVENVERIMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVL 480
Cdd:PRK09577 400 AIGILVDDAIVVVENVERLMVEEGLSPYDATVKAMKQISGAIVGITVVLTSVFVPMAFFGGAVGNIYRQFALSLAVSIGF 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 481 SVLVAMILTPALCATLLKPLkKGEHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPT 560
Cdd:PRK09577 480 SAFLALSLTPALCATLLKPV-DGDHHEKRGFFGWFNRFVARSTQRYATRVGAILKRPLRWLVVYGALTAAAALLFTRLPT 558
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 561 SFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYYFTHEKdnIMSVFATVGSGPGGNGQNVARMFIRLKDWSERDSKT 640
Cdd:PRK09577 559 AFLPDEDQGNFMVMVIRPQGTPLAETMQSVREVESYLRRHEP--VAYTFALGGFNLYGEGPNGGMIFVTLKDWKERKAAR 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 641 GTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDMELQDHAGAGHDALMAARNQLLALAAENPELTRVRHNGLD 720
Cdd:PRK09577 637 DHVQAIVARINERFAGTPNTTVFAMNSPALPDLGSTSGFDFRLQDRGGLGYAAFVAAREQLLAEGAKDPALTDLMFAGTQ 716
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 721 DSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPFS 800
Cdd:PRK09577 717 DAPQLKLDIDRAKASALGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDPDDVKKLRVRNAQGEMVPLA 796
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 801 AFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLL 880
Cdd:PRK09577 797 AFATLHWTLGPPQLTRYNGYPSFTINGSAAPGHSSGEAMAAIERIAATLPAGIGYAWSGQSFEERLSGAQAPMLFALSVL 876
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 881 VVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEA 960
Cdd:PRK09577 877 VVFLALAALYESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLSAKNAILIVEVAKDLVAQRMSLADA 956
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 16130395 961 TLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFPLKPRP 1036
Cdd:PRK09577 957 ALEAARLRLRPIVMTSLAFGVGVLPLAFASGAASGAQIAIGTGVLGGVITATVLAVFLVPLFFVVVGRLFDVGPRR 1032
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
5-1028 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 759.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 5 FIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSG 84
Cdd:NF033617 4 FIKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQSSL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 85 tGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTvRKTG--DTNILTIAFVSTdgSMDKQDIADYVASNI 162
Cdd:NF033617 84 -GYSTITLQFRLGTDLDVALSEVQAAINAAQSLLPSEAPDPPVY-RKANsaDTPIMYIGLTSE--EMPRGQLTDYAERVL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 163 QDPLSRVNGVGDIDAYGSQY-SMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQlggtpsVDKQALNATINAQSLLQ 241
Cdd:NF033617 160 APKLSQINGVGSVDVSGGQRpAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGA------VRGDSVVSTVRANDQLK 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 242 TPEQFRDITLRVNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGL 321
Cdd:NF033617 234 TAEDYEDLVIKYADNGAPVRLGDVATVELGAENVRNRAWANGVPAVVLGINRQPGANPIEVADEIRALLPELQETLPKNI 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 322 EYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLA 401
Cdd:NF033617 314 KVNVLYDRTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIPAVTVPLSLIGTFAVMYLFGFSINLLTLMALVLA 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 402 IGLLVDDAIVVVENVERIMsEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVLS 481
Cdd:NF033617 394 IGLVVDDAIVVVENIHRHI-EEGESPLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFREFAVTLAGAVIIS 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 482 VLVAMILTPALCATLLKPLKKGEHhgqkgffawFNQMFNRNAERYEKGVAKILHRSL--RWIVIYVLL--LGGMVFLFLR 557
Cdd:NF033617 473 GIVALTLTPMMCSRLLKANEKPGR---------FARAVDRFFDGLTARYGRGLKWVLkhRPLTLVVALatLALLPLLYVF 543
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 558 LPTSFLPLEDRGMFTTSVQLPSGS-------TQQQTLKVVEQIEKYYFThekdnimSVFATVGsgpGGNGQNVARMFIRL 630
Cdd:NF033617 544 IPKELAPSEDRGVIFGMIQAPQSIsldymsaKMRDVEKILSSDPEVQSL-------TSFNGVG---GNPGDNTGFGIINL 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 631 KDWSERDSktgTSFAIIERATKAFNQIKEARVIASSPPAISGlgsSAGFDMELQDHA--GAGHDALMAARNQLLALAAEN 708
Cdd:NF033617 614 KPWDERDV---SAQEIIDRLRPKLAKVPGMDLFLFPLQDLPG---GAGSSLPQYQVTltPSDYDSLFTWAEKLKEKLRKS 687
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 709 PELTRVRHNGLDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWY 788
Cdd:NF033617 688 PQFADVDSDLQDKGPELNVDIDRDKAARLGISMQDIGSTLEVAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIY 767
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 789 VRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMD-IMESLVKQLPNGFGLEWTAMSYQERLS 867
Cdd:NF033617 768 VRSNDGKLVPLSTLAKIEERAAPLSLNHFNQFNSATLSFNLAPGVSLGEAIEaLDQAAKELLPSGISGSFQGAARAFQEE 847
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 868 GAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFA 947
Cdd:NF033617 848 GSSLLFLFLLALAAIYLVLAIQYESFVDPLTILSTVPLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFA 927
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 948 NEMN-QKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLV 1026
Cdd:NF033617 928 NELQrHQGLSRREAIYQAAALRLRPILMTTLAMLLGAIPLMLSTGAGAESRFPLGIVIVGGLGVGTLFTLFVLPVVYLLL 1007
|
..
gi 16130395 1027 RR 1028
Cdd:NF033617 1008 AR 1009
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
5-1031 |
0e+00 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 554.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 5 FIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSqSSG 84
Cdd:PRK09579 7 FIRRPVLASVVSLLIVLLGFQAWSKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYMTS-VSR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 85 TGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVStdGSMDKQDIADYVASNIQD 164
Cdd:PRK09579 86 QNFSIISIYARIGADSDRLFTELLAKANEVKNQLPQDAEDPVLSKEAADASALMYISFYS--EEMSNPQITDYLSRVIQP 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 165 PLSRVNGVGDIDAYGSQ-YSMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGGtpsvdkQALNATINAQSLLQTP 243
Cdd:PRK09579 164 KLATLPGMAEAEILGNQvFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKG------EYVVTSINASTELKSA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 244 EQFRDITLRVNQDgSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGLEY 323
Cdd:PRK09579 238 EAFAAIPVKTSGD-SRVLLGDVARVEMGAENYDSISSFDGIPSVYIGIKATPSANPLDVIKEVRAIMPELESQLPPNLKV 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 324 KVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIG 403
Cdd:PRK09579 317 SIAYDATLFIQASIDEVVKTLGEAVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSINLLTLLAMVLAIG 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 404 LLVDDAIVVVENVERIMsEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVLSVL 483
Cdd:PRK09579 397 LVVDDAIVVVENIHRHI-EEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVIISGI 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 484 VAMILTPALCATLLKPlkkgeHHGQKGFFAWFNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLGGMVFLFLRLPTSFL 563
Cdd:PRK09579 476 VALTLSPMMCALLLRH-----EENPSGLAHRLDRLFERLKQRYQRALHGTLNTRPVVLVFAVIVLALIPVLLKFTQSELA 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 564 PLEDRG---MFTTSVQLPS----GSTQQQTLKVVEQIEKYYFTHEkdniMSVFATVGSGPGGngqnvarmfIRLKDWSER 636
Cdd:PRK09579 551 PEEDQGiifMMSSSPQPANldylNAYTDEFTPIFKSFPEYYSSFQ----INGFNGVQSGIGG---------FLLKPWNER 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 637 DSktgTSFAIIERATKAFNQIKEARVIASSPPAISGLGSSAGFDMELqdHAGAGHDALMAARNQLLALAAENPELTRVRH 716
Cdd:PRK09579 618 ER---TQMELLPLVQAKLEEIPGLQIFGFNLPSLPGTGEGLPFQFVI--NTANDYESLLQVAQRVKQRAQESGKFAFLDI 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 717 NGLDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGM 796
Cdd:PRK09579 693 DLAFDKPEVVVDIDRAKAAQMGVSMQDLGGTLATLLGEGEINRFTIDGRSYKVIAQVERPYRDNPGWLNNYYVKNEQGQL 772
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 797 VPFSAFATSRWETGSPRLERYNGYSAVEIVGeaAPGVSTGTAMDIMESLVK-QLPNGFGLEWTAMSYQERLSGAQAPALY 875
Cdd:PRK09579 773 LPLSTLITLSDRARPRQLNQFQQLNSAIISG--FPIVSMGEAIETVQQIAReEAPEGFAFDYAGASRQYVQEGSALWVTF 850
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 876 AISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEM-NQKG 954
Cdd:PRK09579 851 GLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLrHEQG 930
|
970 980 990 1000 1010 1020 1030
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16130395 955 HDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFP 1031
Cdd:PRK09579 931 LSRREAIEEAAAIRLRPVLMTTAAMVFGMVPLILATGAGAVSRFDIGLVIATGMSIGTLFTLFVLPCIYTLLAKPDA 1007
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
4-1036 |
1.21e-153 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 482.61 E-value: 1.21e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 4 FFIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSqSS 83
Cdd:COG3696 8 FSLRNRLLVLLLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVKEVRS-IS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 84 GTGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQavqnqGVTVRKTGDTN----ILTIAFVSTDGS---MDKQDIAD 156
Cdd:COG3696 87 RFGLSVVTVIFEDGTDIYWARQLVLERLQQVREQLPA-----GVTPELGPISTglgeIYQYTLESDPGKyslMELRTLQD 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 157 YVasnIQDPLSRVNGVGDIDAYG---SQYsmRIWLDPAKLNSFQMTAKDVTDAIESQNAQiaVGqlGGTPSVDKQALnaT 233
Cdd:COG3696 162 WV---IRPQLRSVPGVAEVNSFGgfvKQY--QVLVDPAKLRAYGLTLDDVIEALERNNAN--VG--GGYIERGGQEY--L 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 234 INAQSLLQTPEQFRDITLRvNQDGSEVRLGDVATVEMGAE-KYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDE 312
Cdd:COG3696 231 VRGIGLIRSLEDIENIVVK-TRNGTPVLLRDVAEVRIGPApRRGAATLNGEGEVVGGIVLMLKGENALEVIEAVKAKLAE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 313 LAQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNT 392
Cdd:COG3696 310 LKPSLPEGVKIVPFYDRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGNLRAALIVALAIPLSLLFAFIVMRLFGISANL 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 393 LTMFAMVLAIGLLVDDAIVVVENVERIMSEEGLTPREATR-----KSMGQIQGALV-GIAMVLsAVFVPMAFFGGTTGAI 466
Cdd:COG3696 390 MSLGGLAIDFGIIVDGAVVMVENILRRLEENRAAGTPRERlevvlEAAREVRRPIFfATLIII-LVFLPIFTLEGVEGKL 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 467 YRQFSITIVAAMVLSVLVAMILTPALCATLLKPlKKGEHHGqkgffaWFNQMFNRnaeRYEKGVAKILHRSLRWIVIYVL 546
Cdd:COG3696 469 FRPMALTVIFALLGALLLSLTLVPVLASLLLRG-KVPEKEN------PLVRWLKR---LYRPLLRWALRHPKLVLAVALV 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 547 LLGGMVFLFLRLPTSFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKYyfTHEKDNIMSVFATVGSGPGGN---GQNV 623
Cdd:COG3696 539 LLVLALALFPRLGSEFLPELDEGDLLVMATLPPGISLEESVELGQQVERI--LKSFPEVESVVSRTGRAEDATdpmGVNM 616
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 624 ARMFIRLK---DWSERDSKTgtsfAIIERATKAFNQIKEARVIASSP------PAISGLGSS-----AGFDM-ELQDHAg 688
Cdd:COG3696 617 SETFVILKprsEWRSGRTKE----ELIAEMREALEQIPGVNFNFSQPiqmrvdELLSGVRADvavkiFGDDLdVLRRLA- 691
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 689 aghdalmaarNQLLALAAENPELTRV---RHNGLddsPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGR 765
Cdd:COG3696 692 ----------EQIEAVLKTVPGAADVqveRVTGL---PQLDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQVYEGER 758
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 766 VKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNG--YSAVEI----------VGEaapgv 833
Cdd:COG3696 759 RFDIVVRLPEELRDDPEAIRNLPIPTPSGAQVPLSQVADIEVVEGPNQISRENGrrRIVVQAnvrgrdlgsfVAE----- 833
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 834 stgtAMDIMESLVKqLPNGFGLEWTAMS-YQERlsgAQAPALYA--ISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGA 910
Cdd:COG3696 834 ----AQAKVAEQVK-LPPGYYIEWGGQFeNLQR---ATARLAIVvpLALLLIFLLLYLAFGSVRDALLILLNVPFALIGG 905
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 911 LLATWMRGLendvYFQ----VGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPM 986
Cdd:COG3696 906 VLALWLRGM----PLSvsagVGFIALFGVAVLNGVVLVSYINQLRAEGLDLREAIIEGALERLRPVLMTALVAALGLLPM 981
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|
gi 16130395 987 ATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFPLKPRP 1036
Cdd:COG3696 982 ALSTGPGSEVQRPLATVVIGGLITSTLLTLLVLPALYLLFGRRRLRRAAA 1031
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
5-1031 |
2.04e-136 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 437.24 E-value: 2.04e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 5 FIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSG 84
Cdd:PRK10503 16 FILRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSG 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 85 tGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVR-KTGDTNILTIAFVSTdgSMDKQDIADYVASNIQ 163
Cdd:PRK10503 96 -GASVITLQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKvNPADPPIMTLAVTST--AMPMTQVEDMVETRVA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 164 DPLSRVNGVGDIDAYGSQY-SMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQLGG-TPSVdkqalnaTINAQSLLQ 241
Cdd:PRK10503 173 QKISQVSGVGLVTLSGGQRpAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGpTRAV-------TLSANDQMQ 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 242 TPEQFRDITLRVnQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGL 321
Cdd:PRK10503 246 SAEEYRQLIIAY-QNGAPIRLGDVATVEQGAENSWLGAWANKQQAIVMNVQRQPGANIIATADSIRQMLPQLTESLPKSV 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 322 EYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLA 401
Cdd:PRK10503 325 KVTVLSDRTTNIRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIA 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 402 IGLLVDDAIVVVENVERIMsEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVLS 481
Cdd:PRK10503 405 TGFVVDDAIVVIENISRYI-EKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAILIS 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 482 VLVAMILTPALCATLLKP--LKKgehhgQKGFFAWFNQMFNRNAERYEKGVAKILHRSlrWIVIYVLL--LGGMVFLFLR 557
Cdd:PRK10503 484 AVVSLTLTPMMCARMLSQesLRK-----QNRFSRASERMFDRVIAAYGRGLAKVLNHP--WLTLSVALstLLLTVLLWIF 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 558 LPTSFLPLEDRGMFTTSVQLPS----GSTQQQTLKVVEQIEKyyftheKDNIMSVFATVGSGPGGNGQNVARMFIRLKDW 633
Cdd:PRK10503 557 IPKGFFPVQDNGIIQGTLQAPQsssfANMAQRQRQVADVILQ------DPAVQSLTSFVGVDGTNPSLNSARLQINLKPL 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 634 SERDSKTGTsfaIIERATKAFNQIKEARVI--ASSPPAISGLGSSAGFDMELQdhaGAGHDALMAARNQLLALAAENPEL 711
Cdd:PRK10503 631 DERDDRVQK---VIARLQTAVAKVPGVDLYlqPTQDLTIDTQVSRTQYQFTLQ---ATSLDALSTWVPKLMEKLQQLPQL 704
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 712 TRVRHNGLDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQ---AAAPYRMLPDDINLwy 788
Cdd:PRK10503 705 SDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEhntENTPGLAALDTIRL-- 782
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 789 vRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQL--PNGFGLEW--TAMSYQE 864
Cdd:PRK10503 783 -TSSDGGVVPLSSIATIEQRFGPLSINHLDQFPSTTISFNVPDGYSLGDAVQAIMDTEKTLnlPADITTQFqgSTLAFQS 861
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 865 RLSGAQAPALYAIslLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIV 944
Cdd:PRK10503 862 ALGSTVWLIVAAV--VAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMI 939
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 945 EF--ANEMNQkGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVPLF 1022
Cdd:PRK10503 940 DFalAAEREQ-GMSPRDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGICMVGGLIVSQVLTLFTTPVI 1018
|
1050
....*....|....*.
gi 16130395 1023 FVL-------VRRRFP 1031
Cdd:PRK10503 1019 YLLfdrlalyTKSRFP 1034
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
5-1037 |
3.74e-127 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 412.20 E-value: 3.74e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 5 FIDRPIFAWVLAILLCLTGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSg 84
Cdd:PRK10614 7 FIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSS- 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 85 TGQASVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGvTVRKT--GDTNILTIAFVSTDGSmdKQDIADYVASNI 162
Cdd:PRK10614 86 LGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPSGMPSRP-TYRKAnpSDAPIMILTLTSDTYS--QGQLYDFASTQL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 163 QDPLSRVNGVGDIDAYGSQY-SMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGqlggtpSVDKQALNATINAQSLLQ 241
Cdd:PRK10614 163 AQTISQIDGVGDVDVGGSSLpAVRVGLNPQALFNQGVSLDDVRQAISNANVRRPQG------AVEDGTHRWQIQTNDELK 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 242 TPEQFRDITLRVNQdGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPHGL 321
Cdd:PRK10614 237 TAAEYQPLIIHYNN-GAAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDRIRAKLPELRETIPAAI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 322 EYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLA 401
Cdd:PRK10614 316 DLQIAQDRSPTIRASLEEVEQTLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIA 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 402 IGLLVDDAIVVVENVERIMsEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVLS 481
Cdd:PRK10614 396 TGFVVDDAIVVLENISRHL-EAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLFREFAVTLSVAIGIS 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 482 VLVAMILTPALCATLLKPLKKGEHHGQKGffawFNQMFNRNAERYEKGVAKILHRSlRWI-VIYVLLLGGMVFLFLRLPT 560
Cdd:PRK10614 475 LLVSLTLTPMMCAWLLKSSKPREQKRLRG----FGRMLVALQQGYGRSLKWVLNHT-RWVgVVLLGTIALNVWLYISIPK 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 561 SFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEQIEKyyFTHEKDNIMSVFATVgsgpGGNGQNVARMFIRLKDWSERDSkt 640
Cdd:PRK10614 550 TFFPEQDTGRLMGFIQADQSISFQAMRGKLQDFMK--IIRDDPAVDNVTGFT----GGSRVNSGMMFITLKPLSERSE-- 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 641 gTSFAIIERATKAFNQIKEAR--VIASSPPAISGLGSSAGFDMELQDhagaghDALMAARN---QLLALAAENPELTRVR 715
Cdd:PRK10614 622 -TAQQVIDRLRVKLAKEPGANlfLMAVQDIRVGGRQSNASYQYTLLS------DDLAALREwepKIRKALAALPELADVN 694
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 716 HNGLDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGG 795
Cdd:PRK10614 695 SDQQDKGAEMALTYDRDTMARLGIDVQAANSLLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALEKMFVINNEGK 774
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 796 MVPFSAFAtsRWE-TGSPRLERYNGYSAVE-IVGEAAPGVSTGTAMDIMESLVKQL--PNGF--GLEWTAMSYQERLSGA 869
Cdd:PRK10614 775 AIPLSYFA--KWQpANAPLSVNHQGLSAAStISFNLPTGKSLSDASAAIERAMTQLgvPSTVrgSFAGTAQVFQETMNSQ 852
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 870 QAPALYAISllVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANE 949
Cdd:PRK10614 853 LILILAAIA--TVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALE 930
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 950 MNQKGH-DLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVMGGMISATILAIYFVP---LFFVL 1025
Cdd:PRK10614 931 AQRNGNlTAQEAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGAELRQPLGITIVGGLVMSQLLTLYTTPvvyLFFDR 1010
|
1050
....*....|..
gi 16130395 1026 VRRRFPLKPRPE 1037
Cdd:PRK10614 1011 LRLRFSRKPKQT 1022
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
10-1029 |
6.97e-91 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 313.62 E-value: 6.97e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 10 IFAWVLAILlcltGTLAIFSLPVEQYPDLAPPNVRVTANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSgTGQAS 89
Cdd:TIGR00914 18 LATLVMAIL----GIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLETTRSLSR-YGLSQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 90 VTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVrKTGDTNILTIAFVSTDGSMDKQDIADYVAS--NIQD--- 164
Cdd:TIGR00914 93 VTVIFKDGTDLYFARQLVNERLQQARDNLPEGVSPEMGPI-STGLGEIFLYTVEAEEGARKKDGGAYTLTDlrTIQDwii 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 165 --PLSRVNGVGDIDAYG---SQYSMRIwlDPAKLNSFQMTAKDVTDAIESQNAQIavgqlgGTPSVDKQALNATINAQSL 239
Cdd:TIGR00914 172 rpQLRTVPGVAEVNSIGgyvKQFLVAP--DPEKLAAYGLSLADVVNALERNNQNV------GAGYIERRGEQYLVRAPGQ 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 240 LQTPEQFRDITLRvNQDGSEVRLGDVATVEMGAEKYDYLSRFNGKPASGLGVKLASGANEMATAELVLNRLDELAQYFPH 319
Cdd:TIGR00914 244 VQSMDDIRNIVIA-TGEGVPIRIRDVARVQIGKELRTGAATENGKEVVLGTVFMLIGENSRTVAQAVGDKLETINKTLPE 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 320 GLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAmv 399
Cdd:TIGR00914 323 GVEIVTTYDRSQLVDAAIATVKKNLLEGALLVIVILFLFLGNIRAALIAATVIPLSLLITFIGMVFQGISANLMSLGA-- 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 400 LAIGLLVDDAIVVVENVERIMSE----EGLTPREATR-----KSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQF 470
Cdd:TIGR00914 401 LDFGLIVDGAVVIVENAHRRLAEaqhhHGRQLTLKERlhevfAASREVRRPLIFGQLIITLVFLPIFTLTGVEGKMFHPM 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 471 SITIVAAMVLSVLVAMILTPALCATLL-KPLKKGEhhgqkgffawfNQMFNRNAERYEKGVAKILHRSLRWIVIYVLLLG 549
Cdd:TIGR00914 481 AFTVVLALAGAMILSLTFVPAAVALFIrGKVAEKE-----------NRLMRVLKRRYEPLLERVLAWPAVVLGAAAVSIV 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 550 GMVFLFLRLPTSFLPLEDRGMFT-TSVQLPsGSTQQQTLKVVEQIEKYYFTHEKdnIMSVFATVGSGPGGNGQ---NVAR 625
Cdd:TIGR00914 550 LVVWIASRVGGEFIPSLNEGDLAyQALRIP-GTSLAQSVAMQQTLEKLIKSFPE--VARVFAKTGTAEIATDPmppNASD 626
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 626 MFIRLKDWSE-RDSKTGTSFAIIERATKAfnqikeARVIAS----SPPA-------ISGLGSSAGFDMelqdhAGAGHDA 693
Cdd:TIGR00914 627 TYIILKPESQwPEGKKTKEDLIEEIQEAT------VRIPGNnyefTQPIqmrfnelISGVRSDVAVKV-----FGDDLDD 695
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 694 LMAARNQLLALAAENPELTRVRHNGLDDSPQLQIDIDQRKAQALGVAIDDINDTLQTAWGSSYVNDFMDRGRVKKVYVQA 773
Cdd:TIGR00914 696 LDATAEKISAVLKGVPGAADVKVEQTTGLPYLTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRL 775
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 774 AAPYRMLPD-----DINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYSAVEIVGEAApGVSTGTAMDIMESLVK- 847
Cdd:TIGR00914 776 PESLRESPQalrqlPIPLPLSEDARKQFIPLSDVADLRVSPGPNQISRENGKRRVVVSANVR-GRDLGSFVDDAKKAIAe 854
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 848 --QLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYF 925
Cdd:TIGR00914 855 qvKLPPGYWITWGGQFEQLQSATKRLQIVVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISA 934
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 926 QVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGAGSGGQHAVGTGVM 1005
Cdd:TIGR00914 935 AVGFIALSGVAVLNGLVMISFIRKLLEEGPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIATGTGAEVQRPLATVVI 1014
|
1050 1060
....*....|....*....|....
gi 16130395 1006 GGMISATILAIYFVPLFFVLVRRR 1029
Cdd:TIGR00914 1015 GGIITATLLTLFVLPALYRLVHRR 1038
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
311-1031 |
1.43e-25 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 113.80 E-value: 1.43e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 311 DELAQYFPHGLEYKV---AYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFG 387
Cdd:COG1033 188 AIIAKYEDPGVEVYLtgfPVLRGDIAEAIQSDLAIFFPLALLLILLLLFLFFRSLRGVLLPLLVVLLAVIWTLGLMGLLG 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 388 YSVNTLTMFAMVLAIGLLVDDAIVVvenVERIMSE--EGLTPREATRKSMGQiqgalVGIAMVLSAV-----FVPMAFfg 460
Cdd:COG1033 268 IPLSPLTILVPPLLLAIGIDYGIHL---LNRYREErrKGLDKREALREALRK-----LGPPVLLTSLttaigFLSLLF-- 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 461 gTTGAIYRQFSITIVAAMVLSVLVAMILTPALCATLLKPLKKGEHHGQKGFFAWFNQMFNRNAERYEKGVakilhrslrw 540
Cdd:COG1033 338 -SDIPPIRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPKPKTRRLKKPPELGRLLAKLARFVLRRPKVI---------- 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 541 IVIYVLLLGGMVFLFLRLPTSFLPLEDrgmfttsvqLPSGSTQQQTLKVVEqiEKYyfthekDNIMSVFATVGSGPGG-- 618
Cdd:COG1033 407 LVVALVLAVVSLYGISRLKVEYDFEDY---------LPEDSPIRQDLDFIE--ENF------GGSDPLEVVVDTGEPDgl 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 619 -NGQNVARMfIRLKDWSERDSKTGTSFAI---IERATKAFNQIKEA-RVIASSPPAISglgssagfdmelqdhagaghda 693
Cdd:COG1033 470 kDPEVLKEI-DRLQDYLESLPEVGKVLSLadlVKELNQALNEGDPKyYALPESRELLA---------------------- 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 694 lmaarnQLLALAAENPELTRVRhnglddspqlQIDIDQRKAQALgVAIDDIndtlqtawGSSYVNDFMDRgrvkkvyVQA 773
Cdd:COG1033 527 ------QLLLLLSSPPGDDLSR----------FVDEDYSAARVT-VRLKDL--------DSEEIKALVEE-------VRA 574
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 774 AAPYRMLPDDINlwyvrnkdggmvpfsafatsrwetgsprleryngysaVEIVGEAapgvstGTAMDIMESLVKQLPNGF 853
Cdd:COG1033 575 FLAENFPPDGVE-------------------------------------VTLTGSA------VLFAAINESVIESQIRSL 611
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 854 GLewtamsyqerlsgaqapalyaiSLLVVFLCLAALYESWSVPFSVML--VVPLGVIGALLAtWMrglenDVYFQVGLLT 931
Cdd:COG1033 612 LL----------------------ALLLIFLLLLLAFRSLRLGLISLIpnLLPILLTFGLMG-LL-----GIPLNIATAV 663
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 932 V----IGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTGagsGGQHAVGTGVMGG 1007
Cdd:COG1033 664 VasiaLGIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGKAILFTSLTLAAGFGVLLFSSF---PPLADFGLLLALG 740
|
730 740
....*....|....*....|....
gi 16130395 1008 MISATILAIYFVPLFFVLVRRRFP 1031
Cdd:COG1033 741 LLVALLAALLLLPALLLLLDPRIA 764
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
295-592 |
3.15e-13 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 74.03 E-value: 3.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 295 SGANEMATAELVLNRLDELAQYFPHGLEYKV---AYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIA 371
Cdd:COG2409 123 DGDAGDEAAEAVDALRDAVAAAPAPGLTVYVtgpAALAADLNEAFEEDLGRAELITLPVALVVLLLVFRSLVAALLPLLT 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 372 VPVVLMGTFSVLYAFGYSV---NTLTMFAMVLAIGLLVDDAIVVV----ENVERimseeGLTPREATRKSMGQIQ----- 439
Cdd:COG2409 203 AGLAVGVALGLLALLAAFTdvsSFAPNLLTMLGLGVGIDYALFLVsryrEELRA-----GEDREEAVARAVATAGravlf 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 440 -GALVGIAMvLSAVFVPMAFFggttgaiyRQFSITIVAAMVLSVLVAMILTPALCATL-------LKPLKKGEHHGQKGF 511
Cdd:COG2409 278 sGLTVAIAL-LGLLLAGLPFL--------RSMGPAAAIGVAVAVLAALTLLPALLALLgrrvfwpRRPRRRRAAAPESGF 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 512 FAWFnqmfnrnaeryekgVAKILHRSLRWIVIYVLLLGGMVFLFLRLPTSFlPLEDrgmfttsvQLPSGSTQQQTLKVVE 591
Cdd:COG2409 349 WRRL--------------ARAVVRRPVPVLVAAVAVLLALALPALGLRLGL-PDAD--------SLPADSPSRQGYDALA 405
|
.
gi 16130395 592 Q 592
Cdd:COG2409 406 E 406
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
332-496 |
4.03e-09 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 59.61 E-value: 4.03e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 332 FVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGY----SVNTLT-MFAMVLAIGLLV 406
Cdd:pfam03176 136 LRDAGDRDLGLIEAVTLVVIFIILLIVYRSVVAALLPLLTVGLSLGAAQGLVAILAHilgiGLSTFAlNLLVVLLIAVGT 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 407 DDAIVVvenVERIMSE--EGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFfggTTGAIYRQFSITIVAAMVLSVLV 484
Cdd:pfam03176 216 DYALFL---VSRYREElrAGEDREEAVIRAVRGTGKVVTAAGLTVAIAMLALSF---ARLPVFAQVGPTIAIGVLVDVLA 289
|
170
....*....|..
gi 16130395 485 AMILTPALCATL 496
Cdd:pfam03176 290 ALTLLPALLALL 301
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
150-508 |
2.01e-08 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 58.62 E-value: 2.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 150 DKQDIADyVASNIQDPLSRVNGVGDIDA---YGSQYsMRIWLDPAKLNSFQMTAKDVTDAIESQNAQIAVGQL-GGTPSV 225
Cdd:TIGR00914 692 DLDDLDA-TAEKISAVLKGVPGAADVKVeqtTGLPY-LTVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETfEGDRRF 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 226 DkqalnatINaqslLQTPEQFRD---------ITLRVNQDG--SEVRLGDVATVEMgAEKYDYLSRFNGKPASGL----- 289
Cdd:TIGR00914 770 D-------IV----IRLPESLREspqalrqlpIPLPLSEDArkQFIPLSDVADLRV-SPGPNQISRENGKRRVVVsanvr 837
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 290 GVKLASGANEMATaelvlnRLDELAQyFPHG--LEYKVAYETTSFVKASIEDVVKTlleAIALVFLVMYLFLQNFRATLI 367
Cdd:TIGR00914 838 GRDLGSFVDDAKK------AIAEQVK-LPPGywITWGGQFEQLQSATKRLQIVVPV---TLLLIFVLLYAAFGNVKDALL 907
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 368 PTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENVeRIMSEEGLTPREATrksmgqIQGALVGI-- 445
Cdd:TIGR00914 908 VFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFI-RKLLEEGPSLDEAV------YEGALTRVrp 980
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16130395 446 ----AMVLSAVFVPMAFFGGTTGAIYRQFSITIVAAMVLSVLVAMILTPALCATLLKPLKKGEHHGQ 508
Cdd:TIGR00914 981 vlmtALVASLGFVPMAIATGTGAEVQRPLATVVIGGIITATLLTLFVLPALYRLVHRRRHKGRKEHE 1047
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
876-1037 |
1.68e-07 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 55.25 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 876 AISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGAL-LATWMrGLENDVYFQV--GLLTVIGLSakNAI-LIVEFANEMn 951
Cdd:COG1033 225 PLALLLILLLLFLFFRSLRGVLLPLLVVLLAVIWTLgLMGLL-GIPLSPLTILvpPLLLAIGID--YGIhLLNRYREER- 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 952 QKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATStgaGSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRFP 1031
Cdd:COG1033 301 RKGLDKREALREALRKLGPPVLLTSLTTAIGFLSLLFS---DIPPIRDFGIVAAIGVLLAFLTSLTLLPALLSLLPRPKP 377
|
....*.
gi 16130395 1032 LKPRPE 1037
Cdd:COG1033 378 KTRRLK 383
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
317-492 |
3.72e-07 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 54.46 E-value: 3.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 317 FPHGLEYKVAYE---TTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIPtiaVPVVLMG---TFSVLYAFGYSV 390
Cdd:TIGR00921 169 PPSGKFLDVTGSpaiNYDIEREFGKDMGTTMAISGILVVLVLLLDFKRWWRPLLP---LVIILFGvawVLGIMGWLGIPL 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 391 NTLTMFAMVLAIGLLVDDAIVVVENVERiMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAiyrQF 470
Cdd:TIGR00921 246 YATTLLAVPMLIGVGIDYGIQTLNRYEE-ERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAGFAALALSEFPMVS---EF 321
|
170 180
....*....|....*....|..
gi 16130395 471 SITIVAAMVLSVLVAMILTPAL 492
Cdd:TIGR00921 322 GLGLVAGLITAYLLTLLVLPAL 343
|
|
| SecD |
COG0342 |
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular ... |
336-502 |
2.09e-06 |
|
Preprotein translocase subunit SecD [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440111 [Multi-domain] Cd Length: 434 Bit Score: 51.27 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 336 SIEDVVKTLLEAIALVFLVMYLFLQNFRatLIPTIAVPVVLMGTFSVLYAFGYsvnTLTM---FAMVLAIGLLVDDaivv 412
Cdd:COG0342 269 SIEKGLIAGLIGLLLVALFMLLYYRLPG--LVANIALALNVVLLLGVLSLLGA---TLTLpgiAGIILTIGMAVDA---- 339
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 413 veNV---ERIMSE--EGLTPREAT----RKSMGQIQGALV--GIAMvlsavfVPMAFFGgtTGAIyRQFSITIVAAMVLS 481
Cdd:COG0342 340 --NVlifERIREElrAGRSLRAAIeagfKRAFSTILDANVttLIAA------VVLFVLG--TGPV-KGFAVTLILGILIS 408
|
170 180
....*....|....*....|...
gi 16130395 482 VLVAMILTPALCATLL--KPLKK 502
Cdd:COG0342 409 MFTAVPVTRPLLNLLLgrRRLKK 431
|
|
| Patched |
pfam02460 |
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic ... |
339-492 |
1.65e-05 |
|
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic Hedgehog. This protein associates with the smoothened protein to transduce hedgehog signals.
Pssm-ID: 308203 [Multi-domain] Cd Length: 793 Bit Score: 48.89 E-value: 1.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 339 DVVKTLLEAIALVFLVMYLFLQNFRATLIPTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAIVVVENver 418
Cdd:pfam02460 640 STIQNIVITLICMFIVCFLFIPNPPCVFVITLAIASIDIGVFGFLSLWGVDLDPISMITIIMSIGFSVDFSAHIAYH--- 716
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16130395 419 IMSEEGLTPREATRKSMGQI-----QGALVGIAMVLSAVFVPmaffggtTGAIyRQFSITIVAAMVLSVLVAMILTPAL 492
Cdd:pfam02460 717 FVRSRGDTPAERVVDALEALgwpvfQGGLSTILGVLVLLFVP-------SYMV-VVFFKTVFLVVAIGLLHGLFILPII 787
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
324-492 |
3.42e-05 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 47.28 E-value: 3.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 324 KVAYETT---SFVKASIEDVVKTLLEAIALVFLVMYLFLQNFraTLIPTIAVPVVLMGTFSVLYAFGYsvnTLTM---FA 397
Cdd:TIGR01129 231 QILEERTigpSLGADSIEAGIKAGLIGLVLVLVFMILYYRLF--GLIAAIALVINIVLILAILSAFGA---TLTLpgiAG 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 398 MVLAIGLLVDDAIVVvenVERIMSE--EGLTPREAT----RKSMGQIQGAlvGIAMVLSAVFvpMAFFGgtTGAIyRQFS 471
Cdd:TIGR01129 306 LILTIGMAVDANVLI---YERIKEElrLGKSVRQAIeagfERAFSTIFDA--NITTLIAALI--LYVFG--TGPV-KGFA 375
|
170 180
....*....|....*....|.
gi 16130395 472 ITIVAAMVLSVLVAMILTPAL 492
Cdd:TIGR01129 376 VTLAIGIIASLFTALVFTRLL 396
|
|
| 2A0604s01 |
TIGR00916 |
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY ... |
331-485 |
4.84e-05 |
|
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY proteins form the protein translocation appartus in prokaryotes. This family is specific for the SecD and SecF proteins. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273336 [Multi-domain] Cd Length: 192 Bit Score: 45.33 E-value: 4.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 331 SFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRA-TLIPTIAVPVVLmgTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDA 409
Cdd:TIGR00916 40 TLGGELIKAGIIALLIGLVLVLLYMLLRYEWRGAiAAIAALVHDVIL--ILGVLSLFGATLTLPGIAGLLTIIGYSVDDT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 410 IVVVENV-ERIMSEEGLTPREATRKSmgqIQGALVGIAMVLSAVFVPMA---FFGGttGAIyRQFSITIVAAMVLSVLVA 485
Cdd:TIGR00916 118 VVIFDRIrEELRKYKGRTFREAINLG---INQTLSRIIDTNVTTLLAVLalyVFGG--GAI-KGFALTLGIGVIAGTYSS 191
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
334-565 |
5.04e-05 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 47.30 E-value: 5.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 334 KASIEDVVKTLLEAIALVFLVMYLFLQNFR---ATLIPTIAVPVVLMGtFSVLyAFGySVNTLTMFAMVLAIGLLVDDAI 410
Cdd:TIGR03480 265 ATVSEGATVAGLLSFVLVLVLLWLALRSPRlvfAVLVTLIVGLILTAA-FATL-AVG-HLNLISVAFAVLFIGLGVDFAI 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 411 VVV----ENVERimseeGLTPREATRKSMGQIQGALVgIAMVLSAV----FVPMAFFGgttgaiYRQFSITIVAAMVLSV 482
Cdd:TIGR03480 342 QFSlryrEERFR-----GGNHREALSVAARRMGAALL-LAALATAAgffaFLPTDYKG------VSELGIIAGTGMFIAL 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 483 LVAMILTPALCaTLLKPLKKGEHHGqkgfFAWFnqmfnrnaeryeKGVAKILHRSLRWIVIYVLLLG-GMVFLFLRLPTS 561
Cdd:TIGR03480 410 FVTLTVLPALL-RLLRPPRRRKPPG----YATL------------APLDAFLRRHRRPVLGVTLILGiAALALLPQLRFD 472
|
....
gi 16130395 562 FLPL 565
Cdd:TIGR03480 473 FNPL 476
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
324-556 |
7.76e-05 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 46.76 E-value: 7.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 324 KVAYETT---SFVKASIEDVVKTLLEAIALVFLVMYLFLQnfRATLIPTIAVPVVLMGTFSVLYAFGysvNTLTM---FA 397
Cdd:PRK13024 249 KIIESRSvgpTLGQDAIDAGIIAGIIGFALIFLFMLVYYG--LPGLIANIALLLYIFLTLGALSSLG---AVLTLpgiAG 323
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 398 MVLAIGLLVDDAIVVvenVERIMSE--EGLTPREATRKSMgqiQGALVGIA-----MVLSAV--FvpmaFFGgtTGAIyR 468
Cdd:PRK13024 324 LVLGIGMAVDANVLI---FERIKEElrKGKSLKKAFKKGF---KNAFSTILdsnitTLIAAAilF----FFG--TGPV-K 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 469 QFSITIVAAMVLSVLVAMILTPALCATLLKPLKKgehhgqKGFFAWFNQMFNRNAERYEKGVAKI--LHRSLRWIVIYVL 546
Cdd:PRK13024 391 GFATTLIIGILASLFTAVFLTRLLLELLVKRGDK------KPFLFGVKKKKIHNINEGVTIFDRIdfVKKRKWFLIFSIV 464
|
250
....*....|
gi 16130395 547 LLGGMVFLFL 556
Cdd:PRK13024 465 LVIAGIIIFF 474
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
876-1037 |
2.98e-04 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 44.20 E-value: 2.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 876 AISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGA--LLATWMRGLENDVY-FQVGLLTVIGLSAKN--AILIVEFANEM 950
Cdd:pfam03176 149 AVTLVVIFIILLIVYRSVVAALLPLLTVGLSLGAAqgLVAILAHILGIGLStFALNLLVVLLIAVGTdyALFLVSRYREE 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 951 NQKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATSTgagSGGQHAVGTGVMGGMISATILAIYFVPLFFVLVRRRF 1030
Cdd:pfam03176 229 LRAGEDREEAVIRAVRGTGKVVTAAGLTVAIAMLALSFAR---LPVFAQVGPTIAIGVLVDVLAALTLLPALLALLGRWG 305
|
....*..
gi 16130395 1031 PLKPRPE 1037
Cdd:pfam03176 306 LWPPKRD 312
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
289-497 |
2.00e-03 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 42.06 E-value: 2.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 289 LGVKLASGANEMATAELVlNRLDELAQYFPHGLEYKVAYETTSFV---KASIEDVVKTLLEAIALVFLVMYLFlqnFRAt 365
Cdd:COG2409 466 LQVVPDGDPDSPEAIDLV-DRLRDAAAPALEGAEVLVGGTTAVNIdisDALADDLPLVIPVVLGLIFLLLLLL---FRS- 540
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 366 liptIAVPVVLMGTF--SVLYAFGYSV------------------NTLTMFAMVLAIGLLVDDAIVVVEnveRIM--SEE 423
Cdd:COG2409 541 ----VVAPLKAVLTNllSLGAALGVLVlvfqhgwlllgftpgpldSFVPLLLFVILFGLGMDYEVFLVS---RIReeYDR 613
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16130395 424 GLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTgaiYRQFSITIVAAMVL-SVLVAMILTPALcATLL 497
Cdd:COG2409 614 GGGTREAVIRGLARTGRVITSAALIMAAVFAAFATSPLVF---LKQIGFGLAVGVLLdAFVVRMLLVPAL-MALL 684
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
850-1020 |
5.19e-03 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 40.98 E-value: 5.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 850 PNGFGLEWT---AMSYQ-ERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYF 925
Cdd:TIGR00921 170 PSGKFLDVTgspAINYDiEREFGKDMGTTMAISGILVVLVLLLDFKRWWRPLLPLVIILFGVAWVLGIMGWLGIPLYATT 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 926 QVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHACRQRLRPILMTSLAFIFGVLPMATStgaGSGGQHAVGTGVM 1005
Cdd:TIGR00921 250 LLAVPMLIGVGIDYGIQTLNRYEEERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAGFAALALS---EFPMVSEFGLGLV 326
|
170
....*....|....*
gi 16130395 1006 GGMISATILAIYFVP 1020
Cdd:TIGR00921 327 AGLITAYLLTLLVLP 341
|
|
| MelB |
COG2211 |
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism]; |
368-490 |
5.77e-03 |
|
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
Pssm-ID: 441813 [Multi-domain] Cd Length: 447 Bit Score: 40.27 E-value: 5.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16130395 368 PTIAVPVVLMGTFSVLYAFGYSVNTLTMFAMVLAIGLLVDDAI-VVVENVERIMSEegLTPREATRKSMGQIQGALVGIA 446
Cdd:COG2211 82 PWILIGAIPLALSFVLLFTAPDLSPTGKLIYALVTYLLLGLAYtLVNIPYSALGAE--LTPDYEERTRLSSWRFAFAGLG 159
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 16130395 447 MVLSAVFVP--MAFFGGTTGAIYRQFSITIVAAMVLSVLVAMILTP 490
Cdd:COG2211 160 GLLASVLPPplVAAFGGDAALGYRLTALIFAVLGLLAFLLTFFGTK 205
|
|
| |
