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Concise Results
Standard Results
Full Results
putative transporter YjeM [Escherichia coli str. K-12 substr. MG1655]
Protein Classification
glutamate/gamma-aminobutyrate family transporter YjeM ( domain architecture ID 11487707 )
glutamate/gamma-aminobutyrate family transporter similar to Escherichia coli YjeM
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15238
PRK15238 inner membrane transporter YjeM; Provisional
1-493
0e+00
inner membrane transporter YjeM; Provisional
Pssm-ID: 237929 [Multi-domain]
Cd Length: 496
Bit Score: 804.93
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 1 M PH T I KK M SLIGLILMIFTSVFGFANSP S A Y YLMGYSAIP F YI F SA L LFFIPFALMMAE M G A A YRK E E GGIYSWMN N SVG 80
Cdd:PRK15238 2 M SN T K KK L SLIGLILMIFTSVFGFANSP R A F YLMGYSAIP W YI L SA I LFFIPFALMMAE Y G S A FKD E K GGIYSWMN K SVG 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 81 P R FAFIGTFMWF S SYIIWMVST SA K V W V PFSTF LY G S D M TQ H W RIA GL EP TQVVG L LAV A WMILVT V VASKGINKIA RI T 160
Cdd:PRK15238 82 P K FAFIGTFMWF A SYIIWMVST AS K I W I PFSTF IF G K D T TQ T W HFL GL NS TQVVG I LAV I WMILVT F VASKGINKIA KV T 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 161 AV GGIAVM C LN L VLLLVSI T IL L LNGGHFAQ D I --- N F LA SPNP G YQS GL A M LSFVVFAIFAYGGIEAVGGLVDKTENPE 237
Cdd:PRK15238 162 SI GGIAVM L LN I VLLLVSI I IL I LNGGHFAQ P I gvs S F VT SPNP A YQS PI A V LSFVVFAIFAYGGIEAVGGLVDKTENPE 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 238 KNF A KGI VF AAIVISIGYSLAIFLWGVSTNWQQVLSN G SVNLGNITYVLM KS LG M TLG N AL H LSP E ASL S LGVWFARITG 317
Cdd:PRK15238 242 KNF P KGI II AAIVISIGYSLAIFLWGVSTNWQQVLSN K SVNLGNITYVLM NN LG Y TLG H AL G LSP A ASL T LGVWFARITG 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 318 LSMFLAYTGAFFTL C YSPLK AI I Q GTPKALWP EP MT R LN AM GMP SI AMW M QC GL V T VFILLVSFGG GT ASAFFN K LTLMA 397
Cdd:PRK15238 322 LSMFLAYTGAFFTL S YSPLK QL I E GTPKALWP KK MT K LN KN GMP AN AMW L QC II V S VFILLVSFGG DA ASAFFN I LTLMA 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 398 NVSMTLPYLFLA L AFPFFK ARQ D L DRPFV I FKT HL S AM IAT V VVVLVV T FANVFTIIQPV V E a GD WD ST L WMIGGPVFFS 477
Cdd:PRK15238 402 NVSMTLPYLFLA G AFPFFK KKK D I DRPFV V FKT KK S TL IAT I VVVLVV G FANVFTIIQPV I E - GD YQ ST F WMIGGPVFFS 480
490
....*....|....*.
gi 90111695 478 L LA MA IYQNY CSRV A K 493
Cdd:PRK15238 481 I LA WI IYQNY EKKM A N 496
Name
Accession
Description
Interval
E-value
PRK15238
PRK15238 inner membrane transporter YjeM; Provisional
1-493
0e+00
inner membrane transporter YjeM; Provisional
Pssm-ID: 237929 [Multi-domain]
Cd Length: 496
Bit Score: 804.93
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 1 M PH T I KK M SLIGLILMIFTSVFGFANSP S A Y YLMGYSAIP F YI F SA L LFFIPFALMMAE M G A A YRK E E GGIYSWMN N SVG 80
Cdd:PRK15238 2 M SN T K KK L SLIGLILMIFTSVFGFANSP R A F YLMGYSAIP W YI L SA I LFFIPFALMMAE Y G S A FKD E K GGIYSWMN K SVG 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 81 P R FAFIGTFMWF S SYIIWMVST SA K V W V PFSTF LY G S D M TQ H W RIA GL EP TQVVG L LAV A WMILVT V VASKGINKIA RI T 160
Cdd:PRK15238 82 P K FAFIGTFMWF A SYIIWMVST AS K I W I PFSTF IF G K D T TQ T W HFL GL NS TQVVG I LAV I WMILVT F VASKGINKIA KV T 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 161 AV GGIAVM C LN L VLLLVSI T IL L LNGGHFAQ D I --- N F LA SPNP G YQS GL A M LSFVVFAIFAYGGIEAVGGLVDKTENPE 237
Cdd:PRK15238 162 SI GGIAVM L LN I VLLLVSI I IL I LNGGHFAQ P I gvs S F VT SPNP A YQS PI A V LSFVVFAIFAYGGIEAVGGLVDKTENPE 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 238 KNF A KGI VF AAIVISIGYSLAIFLWGVSTNWQQVLSN G SVNLGNITYVLM KS LG M TLG N AL H LSP E ASL S LGVWFARITG 317
Cdd:PRK15238 242 KNF P KGI II AAIVISIGYSLAIFLWGVSTNWQQVLSN K SVNLGNITYVLM NN LG Y TLG H AL G LSP A ASL T LGVWFARITG 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 318 LSMFLAYTGAFFTL C YSPLK AI I Q GTPKALWP EP MT R LN AM GMP SI AMW M QC GL V T VFILLVSFGG GT ASAFFN K LTLMA 397
Cdd:PRK15238 322 LSMFLAYTGAFFTL S YSPLK QL I E GTPKALWP KK MT K LN KN GMP AN AMW L QC II V S VFILLVSFGG DA ASAFFN I LTLMA 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 398 NVSMTLPYLFLA L AFPFFK ARQ D L DRPFV I FKT HL S AM IAT V VVVLVV T FANVFTIIQPV V E a GD WD ST L WMIGGPVFFS 477
Cdd:PRK15238 402 NVSMTLPYLFLA G AFPFFK KKK D I DRPFV V FKT KK S TL IAT I VVVLVV G FANVFTIIQPV I E - GD YQ ST F WMIGGPVFFS 480
490
....*....|....*.
gi 90111695 478 L LA MA IYQNY CSRV A K 493
Cdd:PRK15238 481 I LA WI IYQNY EKKM A N 496
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
6-427
1.80e-31
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 125.78
E-value: 1.80e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 6 K K MS L IG L ILMIFTSVF G --- F ANSPS A YY L M G YS AI PFYIF s A L L FFIPF AL MM AE MGA A Y r KEE GG I Y SWMNNSV GP R 82
Cdd:COG0531 11 R K LG L FD L VALGVGAII G agi F VLPGL A AG L A G PA AI LAWLI - A G L LALLV AL SY AE LAS A F - PRA GG A Y TYARRAL GP L 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 83 FA F IGTFMWFS SY IIWMVSTSAKVWVPF S TFL ygsdmtqhwriagle P TQVVG L L A VAWMI L V T VVASK G INKI A RITAV 162
Cdd:COG0531 89 LG F LAGWALLL SY VLAVAAVAVAFGGYL S SLF --------------- P AGGSV L I A LVLIL L L T LLNLR G VKES A KVNNI 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 163 GGIAVMCLN L VLLL V SI tilllnggh FA Q D INFLASPN P GYQSGLAM L SFVVF A I FA YG G I EA VGG L VDKTE NP EK N FAK 242
Cdd:COG0531 154 LTVLKLLVL L LFIV V GL --------- FA F D PANFTPFL P AGGGLSGV L AALAL A F FA FT G F EA IAN L AEEAK NP KR N IPR 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 243 G I VFAAIVISIG Y S L AIFLWGVSTNWQQV lsngs VNL G NITYVLMKSL gmtlgnalhlspeasls L G V W F A RITG L SMF L 322
Cdd:COG0531 225 A I ILSLLIVGVL Y I L VSLALTGVVPYDEL ----- AAS G APLADAAEAV ----------------- F G P W G A ILIA L GAL L 282
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 323 AYT GA FFTLCYSPLKAIIQGTPKA L W P EPMTRLNA - M G M P SI A MWMQCGLVTVFI LL V sfgggta S A F F NK L TLM A N V SM 401
Cdd:COG0531 283 SLL GA LNASILGASRLLYAMARDG L L P KVFAKVHP r F G T P VN A ILLTGVIALLLL LL G ------- A A S F TA L ASL A S V GV 355
410 420
....*....|....*....|....*..
gi 90111695 402 T L P YL FL ALA FP - FFKA R Q DL D RPF VI 427
Cdd:COG0531 356 L L A YL LV ALA VI v LRRR R P DL P RPF RV 382
AA_permease_2
pfam13520 Amino acid permease;
9-475
5.79e-14
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 73.88
E-value: 5.79e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 9 S L IGLILMIFT SV F G FANSPSA - YYLM G YSA I PFYIFS A LL F FIPFA L MM AE MGA A YRKE e GGIY SWMN N SV G PRF AF IG 87
Cdd:pfam13520 2 G L LSAFALVIG SV I G SGIFVAP l VASG G PAL I VWGWIA A II F SLAVG L VY AE LSS A LPRS - GGIY VYLE N AF G KFV AF LA 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 88 TFMWFSS Y IIWMV S TSA kvw V PF S TF L YG sdmtqh WRIAGLEP T QVVGLL A V A WM I LVTVVASK G INKI A R I TAVG GI AV 167
Cdd:pfam13520 81 GWSNWFA Y VLGLA S SAS --- V AA S YL L SA ------ LGPDLVPT T WLTYGI A I A IL I IFAIINIR G VRES A K I QNIL GI LK 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 168 MC L N L V L LLV s ITILLLN GG H F AQDINFLASPN P GYQS G la MLSFVVFAIFAYG G I E AVGGLVD kt E NPEK N FA K G I VFA 247
Cdd:pfam13520 152 LL L P L I L III - LGLVTAD GG G F NLLSGEWHTFF P DGWP G -- VFAGFLGVLWSFT G F E SAANVSE -- E VKKR N VP K A I FIG 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 248 A I VISIG Y S L AIFLWGVSTNW qqvls NGSVNLGNITY V LMKSLGMTL G NALH lspeaslslg VWFARITG LS MFL A YTG A 327
Cdd:pfam13520 227 V I IVGVL Y I L VNIAFFGVVPD ----- DEIALSSGLGQ V AALLFQAVG G KWGA ---------- IIVVILLA LS LLG A VNT A 291
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 328 FFTLCYSPLKAIIQ G T pk ALWPEPMTRL N AM G M P SI A MWMQCG L VTVFI LL VSFGGGTAS A FFN kltl MANVSMT L P YL F 407
Cdd:pfam13520 292 IVGASRLLYALARD G V -- LPFSRFFAKV N KF G S P IR A IILTAI L SLILL LL FLLSPAAYN A LLS ---- LSAYGYL L S YL L 365
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 90111695 408 LALAFPFFKARQD ldrpfv IFKTHLSAMIATVVVV L VVT F AN V FTIIQ PV VE A GDWDSTLWM I GGPV F 475
Cdd:pfam13520 366 PIIGLLILRKKRP ------ DLGRIPGRWPVAIFGI L FSL F LI V ALFFP PV GP A TGSSLNYAI I LIVA F 427
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
6-258
8.02e-04
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 42.04
E-value: 8.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 6 K KMS L IGLILM I FTSVF G --- F ANSPSAYYLM G YSAIPFYIFSAL - L F F I PF AL MM AE M G AAYR K E e GG I Y SWMNNSV GP 81
Cdd:TIGR00911 42 K EIT L LSGVGI I VGTII G sgi F VSPKGVLKNA G SVGLALIMWAVC g I F S I VG AL VY AE L G TTIP K S - GG E Y NYILEVF GP 120
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 82 RF AF IG tf M W FSSYI I WMV S T s A KVWVP F STFLY gsdmt QHWRIAGLE P TQVVG L L AV AWMI L V T V V ASKGINKIA R ITA 161
Cdd:TIGR00911 121 LL AF LR -- L W IELLV I RPG S Q - A VNALN F AIYIL ----- TPVFPDCEV P EWAIR L V AV LCVL L L T L V NCLSVKWAT R VQD 192
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 162 VGGIAVM cln L V LLL VS IT -- IL L LN GG -- HFAQDIN F LASPNPGYQSG LA ML S fvvf A I F AYGG IEAVGGLVDKTE NP E 237
Cdd:TIGR00911 193 IFTACKL --- L A LLL II IT gw VQ L GK GG ve SLNPKNA F EGTETSAGGIV LA FY S ---- G I W AYGG WNYLNFVTEEVK NP Y 265
250 260
....*....|....*....|.
gi 90111695 238 KNFAKG I VFAAIVISIG Y S L A 258
Cdd:TIGR00911 266 RTLPIA I IISMPIVTFI Y V L T 286
Name
Accession
Description
Interval
E-value
PRK15238
PRK15238 inner membrane transporter YjeM; Provisional
1-493
0e+00
inner membrane transporter YjeM; Provisional
Pssm-ID: 237929 [Multi-domain]
Cd Length: 496
Bit Score: 804.93
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 1 M PH T I KK M SLIGLILMIFTSVFGFANSP S A Y YLMGYSAIP F YI F SA L LFFIPFALMMAE M G A A YRK E E GGIYSWMN N SVG 80
Cdd:PRK15238 2 M SN T K KK L SLIGLILMIFTSVFGFANSP R A F YLMGYSAIP W YI L SA I LFFIPFALMMAE Y G S A FKD E K GGIYSWMN K SVG 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 81 P R FAFIGTFMWF S SYIIWMVST SA K V W V PFSTF LY G S D M TQ H W RIA GL EP TQVVG L LAV A WMILVT V VASKGINKIA RI T 160
Cdd:PRK15238 82 P K FAFIGTFMWF A SYIIWMVST AS K I W I PFSTF IF G K D T TQ T W HFL GL NS TQVVG I LAV I WMILVT F VASKGINKIA KV T 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 161 AV GGIAVM C LN L VLLLVSI T IL L LNGGHFAQ D I --- N F LA SPNP G YQS GL A M LSFVVFAIFAYGGIEAVGGLVDKTENPE 237
Cdd:PRK15238 162 SI GGIAVM L LN I VLLLVSI I IL I LNGGHFAQ P I gvs S F VT SPNP A YQS PI A V LSFVVFAIFAYGGIEAVGGLVDKTENPE 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 238 KNF A KGI VF AAIVISIGYSLAIFLWGVSTNWQQVLSN G SVNLGNITYVLM KS LG M TLG N AL H LSP E ASL S LGVWFARITG 317
Cdd:PRK15238 242 KNF P KGI II AAIVISIGYSLAIFLWGVSTNWQQVLSN K SVNLGNITYVLM NN LG Y TLG H AL G LSP A ASL T LGVWFARITG 321
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 318 LSMFLAYTGAFFTL C YSPLK AI I Q GTPKALWP EP MT R LN AM GMP SI AMW M QC GL V T VFILLVSFGG GT ASAFFN K LTLMA 397
Cdd:PRK15238 322 LSMFLAYTGAFFTL S YSPLK QL I E GTPKALWP KK MT K LN KN GMP AN AMW L QC II V S VFILLVSFGG DA ASAFFN I LTLMA 401
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 398 NVSMTLPYLFLA L AFPFFK ARQ D L DRPFV I FKT HL S AM IAT V VVVLVV T FANVFTIIQPV V E a GD WD ST L WMIGGPVFFS 477
Cdd:PRK15238 402 NVSMTLPYLFLA G AFPFFK KKK D I DRPFV V FKT KK S TL IAT I VVVLVV G FANVFTIIQPV I E - GD YQ ST F WMIGGPVFFS 480
490
....*....|....*.
gi 90111695 478 L LA MA IYQNY CSRV A K 493
Cdd:PRK15238 481 I LA WI IYQNY EKKM A N 496
PotE
COG0531 Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
6-427
1.80e-31
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
Pssm-ID: 440297 [Multi-domain]
Cd Length: 438
Bit Score: 125.78
E-value: 1.80e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 6 K K MS L IG L ILMIFTSVF G --- F ANSPS A YY L M G YS AI PFYIF s A L L FFIPF AL MM AE MGA A Y r KEE GG I Y SWMNNSV GP R 82
Cdd:COG0531 11 R K LG L FD L VALGVGAII G agi F VLPGL A AG L A G PA AI LAWLI - A G L LALLV AL SY AE LAS A F - PRA GG A Y TYARRAL GP L 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 83 FA F IGTFMWFS SY IIWMVSTSAKVWVPF S TFL ygsdmtqhwriagle P TQVVG L L A VAWMI L V T VVASK G INKI A RITAV 162
Cdd:COG0531 89 LG F LAGWALLL SY VLAVAAVAVAFGGYL S SLF --------------- P AGGSV L I A LVLIL L L T LLNLR G VKES A KVNNI 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 163 GGIAVMCLN L VLLL V SI tilllnggh FA Q D INFLASPN P GYQSGLAM L SFVVF A I FA YG G I EA VGG L VDKTE NP EK N FAK 242
Cdd:COG0531 154 LTVLKLLVL L LFIV V GL --------- FA F D PANFTPFL P AGGGLSGV L AALAL A F FA FT G F EA IAN L AEEAK NP KR N IPR 224
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 243 G I VFAAIVISIG Y S L AIFLWGVSTNWQQV lsngs VNL G NITYVLMKSL gmtlgnalhlspeasls L G V W F A RITG L SMF L 322
Cdd:COG0531 225 A I ILSLLIVGVL Y I L VSLALTGVVPYDEL ----- AAS G APLADAAEAV ----------------- F G P W G A ILIA L GAL L 282
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 323 AYT GA FFTLCYSPLKAIIQGTPKA L W P EPMTRLNA - M G M P SI A MWMQCGLVTVFI LL V sfgggta S A F F NK L TLM A N V SM 401
Cdd:COG0531 283 SLL GA LNASILGASRLLYAMARDG L L P KVFAKVHP r F G T P VN A ILLTGVIALLLL LL G ------- A A S F TA L ASL A S V GV 355
410 420
....*....|....*....|....*..
gi 90111695 402 T L P YL FL ALA FP - FFKA R Q DL D RPF VI 427
Cdd:COG0531 356 L L A YL LV ALA VI v LRRR R P DL P RPF RV 382
AA_permease_2
pfam13520 Amino acid permease;
9-475
5.79e-14
Amino acid permease;
Pssm-ID: 404414 [Multi-domain]
Cd Length: 427
Bit Score: 73.88
E-value: 5.79e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 9 S L IGLILMIFT SV F G FANSPSA - YYLM G YSA I PFYIFS A LL F FIPFA L MM AE MGA A YRKE e GGIY SWMN N SV G PRF AF IG 87
Cdd:pfam13520 2 G L LSAFALVIG SV I G SGIFVAP l VASG G PAL I VWGWIA A II F SLAVG L VY AE LSS A LPRS - GGIY VYLE N AF G KFV AF LA 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 88 TFMWFSS Y IIWMV S TSA kvw V PF S TF L YG sdmtqh WRIAGLEP T QVVGLL A V A WM I LVTVVASK G INKI A R I TAVG GI AV 167
Cdd:pfam13520 81 GWSNWFA Y VLGLA S SAS --- V AA S YL L SA ------ LGPDLVPT T WLTYGI A I A IL I IFAIINIR G VRES A K I QNIL GI LK 151
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 168 MC L N L V L LLV s ITILLLN GG H F AQDINFLASPN P GYQS G la MLSFVVFAIFAYG G I E AVGGLVD kt E NPEK N FA K G I VFA 247
Cdd:pfam13520 152 LL L P L I L III - LGLVTAD GG G F NLLSGEWHTFF P DGWP G -- VFAGFLGVLWSFT G F E SAANVSE -- E VKKR N VP K A I FIG 226
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 248 A I VISIG Y S L AIFLWGVSTNW qqvls NGSVNLGNITY V LMKSLGMTL G NALH lspeaslslg VWFARITG LS MFL A YTG A 327
Cdd:pfam13520 227 V I IVGVL Y I L VNIAFFGVVPD ----- DEIALSSGLGQ V AALLFQAVG G KWGA ---------- IIVVILLA LS LLG A VNT A 291
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 328 FFTLCYSPLKAIIQ G T pk ALWPEPMTRL N AM G M P SI A MWMQCG L VTVFI LL VSFGGGTAS A FFN kltl MANVSMT L P YL F 407
Cdd:pfam13520 292 IVGASRLLYALARD G V -- LPFSRFFAKV N KF G S P IR A IILTAI L SLILL LL FLLSPAAYN A LLS ---- LSAYGYL L S YL L 365
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 90111695 408 LALAFPFFKARQD ldrpfv IFKTHLSAMIATVVVV L VVT F AN V FTIIQ PV VE A GDWDSTLWM I GGPV F 475
Cdd:pfam13520 366 PIIGLLILRKKRP ------ DLGRIPGRWPVAIFGI L FSL F LI V ALFFP PV GP A TGSSLNYAI I LIVA F 427
AA_permease
pfam00324 Amino acid permease;
10-416
2.36e-07
Amino acid permease;
Pssm-ID: 366028 [Multi-domain]
Cd Length: 467
Bit Score: 53.09
E-value: 2.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 10 L I G L ILM I F T SV F g FANSPSAYYLMGYS A IPF Y IF S ALLF F I p FA L MMA E M g AAYRKEE GG I Y SWMNNSV GP RFA F IGTF 89
Cdd:pfam00324 4 M I A L GGV I G T GL F - VGSGSVLGQAGPAG A LLG Y LI S GVVI F L - VM L SLG E I - STNGPVS GG F Y TYASRFL GP SLG F ATGW 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 90 MWFS S Y I iwmvstsak VWVPFSTFLYGSDMTQHWRIAGLEPTQ V V G LLAVAWMILVTV V AS K GINKIARIT A V gg I AVMC 169
Cdd:pfam00324 81 NYWL S W I --------- TVLALELTAASILIQFWELVPDIPYLW V W G AVFLVLLTIINL V GV K WYGEAEFWF A L -- I KIIA 149
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 170 LNLVLLLVS I TILLL N GGHF A QDINF --- LASP N PGYQS G LAML S FV V F A I FA YG GIE A VG GLVDKTE NPEK NFA K G I VF 246
Cdd:pfam00324 150 IIGFIIVGI I LLSGG N PNDG A IFRYL gdn GGKN N FPPGF G KGFI S VF V I A F FA FT GIE L VG IAAGEVK NPEK SIP K A I LQ 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 247 AAIV I S I G Y S L AIFLW G VSTN W QQV lsn G SV N LGNITYVLMKSLGMT LG nalhlspeaslslgvwfar I T GL SMFL ay TG 326
Cdd:pfam00324 230 VIWR I T I F Y I L SLLAI G LLVP W NDP --- G LL N DSASAASPFVIFFKF LG ------------------- I S GL APLI -- NA 285
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 327 AFF T LCY S PLKAIIQGTPKA L W -------- P EPMTRLNAM G M P SI A MWMQCGLVTVFI LL V S FGGGTASA F FNKLTLMAN 398
Cdd:pfam00324 286 VIL T AAL S AANSSLYSGSRM L Y slardgla P KFLKKVDKR G V P LR A ILVSMVISLLAL LL A S LNPAIVFN F LLAISGLSG 365
410
....*....|....*...
gi 90111695 399 VSM tlp YLFLA L AFPF F K 416
Cdd:pfam00324 366 LIV --- WGLIS L SHLR F R 380
2A0308
TIGR00911 L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
6-258
8.02e-04
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 273332 [Multi-domain]
Cd Length: 501
Bit Score: 42.04
E-value: 8.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 6 K KMS L IGLILM I FTSVF G --- F ANSPSAYYLM G YSAIPFYIFSAL - L F F I PF AL MM AE M G AAYR K E e GG I Y SWMNNSV GP 81
Cdd:TIGR00911 42 K EIT L LSGVGI I VGTII G sgi F VSPKGVLKNA G SVGLALIMWAVC g I F S I VG AL VY AE L G TTIP K S - GG E Y NYILEVF GP 120
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 82 RF AF IG tf M W FSSYI I WMV S T s A KVWVP F STFLY gsdmt QHWRIAGLE P TQVVG L L AV AWMI L V T V V ASKGINKIA R ITA 161
Cdd:TIGR00911 121 LL AF LR -- L W IELLV I RPG S Q - A VNALN F AIYIL ----- TPVFPDCEV P EWAIR L V AV LCVL L L T L V NCLSVKWAT R VQD 192
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 90111695 162 VGGIAVM cln L V LLL VS IT -- IL L LN GG -- HFAQDIN F LASPNPGYQSG LA ML S fvvf A I F AYGG IEAVGGLVDKTE NP E 237
Cdd:TIGR00911 193 IFTACKL --- L A LLL II IT gw VQ L GK GG ve SLNPKNA F EGTETSAGGIV LA FY S ---- G I W AYGG WNYLNFVTEEVK NP Y 265
250 260
....*....|....*....|.
gi 90111695 238 KNFAKG I VFAAIVISIG Y S L A 258
Cdd:TIGR00911 266 RTLPIA I IISMPIVTFI Y V L T 286
PRK11049
PRK11049 D-alanine/D-serine/glycine permease; Provisional
216-276
9.66e-03
D-alanine/D-serine/glycine permease; Provisional
Pssm-ID: 236830
Cd Length: 469
Bit Score: 38.56
E-value: 9.66e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 90111695 216 A I FA YG GIE A VG GLVDK T EN PEK NFAKG I VFAA I V I SIG Y SL A IFLWGVS T N W QQ V LSNG S 276
Cdd:PRK11049 220 A V FA FV GIE L VG TTAAE T KD PEK SLPRA I NSIP I R I IMF Y VF A LIVIMSV T P W SS V VPDK S 280
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
