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Conserved domains on  [gi|16764703|ref|NP_460318|]
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flavoprotein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

Protein Classification

FAD-dependent oxidoreductase( domain architecture ID 11484555)

FAD-dependent oxidoreductase similar to Escherichia coli probable electron transfer flavoprotein-quinone oxidoreductase YdiS that may accept electrons from YdiQ/YdiR and reduce a quinone

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PRK10015 PRK10015
oxidoreductase; Provisional
 1-428 0e+00

oxidoreductase; Provisional


:

Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 831.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGFATSAPIERVVTREKISFL 80
Cdd:PRK10015   1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPVERKVTREKISFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   81 TEESAVTLDFHRAPP-TPPLTSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILAD 159
Cdd:PRK10015  81 TEESAVTLDFHREQPdVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  160 GVNSMLGRSLDMVPVSSAHHYAVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCG 239
Cdd:PRK10015 161 GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  240 LGDIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVGDAAGLCLNLGYTVRGMDLA 319
Cdd:PRK10015 241 LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLA 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  320 IASAQAAAQTAIDAKARQDFSAASLAGYKRALEKNGVLRDMRHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVP 399
Cdd:PRK10015 321 IASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQ 400

                        410       420
                 ....*....|....*....|....*....
gi 16764703  400 PLRKTILSHAKKIGLVNLLKDGIKGATAL 428
Cdd:PRK10015 401 PVRKMIMGHAKKIGLINLLKDGIKGATAL 429
 
Name Accession Description Interval E-value
PRK10015 PRK10015
oxidoreductase; Provisional
 1-428 0e+00

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 831.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGFATSAPIERVVTREKISFL 80
Cdd:PRK10015   1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPVERKVTREKISFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   81 TEESAVTLDFHRAPP-TPPLTSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILAD 159
Cdd:PRK10015  81 TEESAVTLDFHREQPdVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  160 GVNSMLGRSLDMVPVSSAHHYAVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCG 239
Cdd:PRK10015 161 GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  240 LGDIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVGDAAGLCLNLGYTVRGMDLA 319
Cdd:PRK10015 241 LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLA 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  320 IASAQAAAQTAIDAKARQDFSAASLAGYKRALEKNGVLRDMRHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVP 399
Cdd:PRK10015 321 IASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQ 400

                        410       420
                 ....*....|....*....|....*....
gi 16764703  400 PLRKTILSHAKKIGLVNLLKDGIKGATAL 428
Cdd:PRK10015 401 PVRKMIMGHAKKIGLINLLKDGIKGATAL 429
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
13-353 8.77e-46

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 159.75  E-value: 8.77e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  13 AGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLyAHSIESIMPgFATSAPIERVVTREKISFLTEESAVTldfhr 92
Cdd:COG0644   1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEP-LGLDEPLERPVRGARFYSPGGKSVEL----- 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  93 apPTPPLTSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTgVQAGDDI-LDANIVILADGVNSMLGRSLDM 171
Cdd:COG0644  74 --PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVV-VRTGDGEeIRADYVVDADGARSLLARKLGL 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703 172 VPVSSA-HHYAVGVKELIGLSPALIEErfnlashEGAAWLFAGAPSNGlmGGGFLYT-NRDSVSLGlvcglgdiahatks 249
Cdd:COG0644 151 KRRSDEpQDYALAIKEHWELPPLEGVD-------PGAVEFFFGEGAPG--GYGWVFPlGDGRVSVG-------------- 207

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703 250 vpqmledfkqhpairpliqggtlleysahmVPEGGIAmmPELANDGVMIVGDAAGLClnLGYTVRGMDLAIASAQAAAQT 329
Cdd:COG0644 208 ------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFV--DPLTGEGIHLAMKSGRLAAEA 253

                       330       340
                ....*....|....*....|....
gi 16764703 330 AIDAKARQDFSAASLAGYKRALEK 353
Cdd:COG0644 254 IAEALEGGDFSAEALAEYERRLRE 277
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 6-305 7.60e-20

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 89.30  E-value: 7.60e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     6 FDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGfatSAPIERVVTREKISFlteesa 85
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPG---ELIVNLVRGARFFSP------ 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    86 vTLDFHRAPPTPPLtSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDI-LDANIVILADGVNSM 164
Cdd:TIGR02032  72 -NGDSVEIPIETEL-AYVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGSEGtVTAKIVIGADGSRSI 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   165 LGRSLDMVPvsSAHHYAVGVKELIGLSPALIEERFNL------ASHEGAAWLFAGApsnglmgggflytnRDSVSLGLVc 238
Cdd:TIGR02032 150 VAKKLGLKK--EPREYGVAARAEVEMPDEEVDEDFVEvyidrgIVPGGYGWVFPKG--------------DGTANVGVG- 212

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16764703   239 glGDIAHATKSVPQMLEDFKQHpaiRPLIQGGTLLEYSAHMVPEGGIAMmpELANDGVMIVGDAAGL 305
Cdd:TIGR02032 213 --SRSAEEGEDPKKYLKDFLAR---RPELKDAETVEVCGALIPIGRPDE--KLVRGNVLLVGDAAGH 272
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 7-145 8.92e-09

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 56.91  E-value: 8.92e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIE-----RGNSA---------GSKNMTGGRLYAHSIESIMPGFATSAPIERVV 72
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEkgqpfGGATAwssggidalGNPPQGGIDSPELHPTDTLKGLDELADHPYVE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    73 T-----REKISFLTEESavtLDFHRAPPTP------------PLTSYTVLRNKLDPW--------LMAQAEQAGAQFIPG 127
Cdd:pfam00890  81 AfveaaPEAVDWLEALG---VPFSRTEDGHldlrplgglsatWRTPHDAADRRRGLGtghallarLLEGLRKAGVDFQPR 157

                         170
                  ....*....|....*...
gi 16764703   128 VRVDALVREGNRVTGVQA 145
Cdd:pfam00890 158 TAADDLIVEDGRVTGAVV 175
 
Name Accession Description Interval E-value
PRK10015 PRK10015
oxidoreductase; Provisional
 1-428 0e+00

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 831.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGFATSAPIERVVTREKISFL 80
Cdd:PRK10015   1 MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAASAPVERKVTREKISFL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   81 TEESAVTLDFHRAPP-TPPLTSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILAD 159
Cdd:PRK10015  81 TEESAVTLDFHREQPdVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  160 GVNSMLGRSLDMVPVSSAHHYAVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCG 239
Cdd:PRK10015 161 GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMGGGFLYTNKDSISLGLVCG 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  240 LGDIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVGDAAGLCLNLGYTVRGMDLA 319
Cdd:PRK10015 241 LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNDGVMIVGDAAGFCLNLGFTVRGMDLA 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  320 IASAQAAAQTAIDAKARQDFSAASLAGYKRALEKNGVLRDMRHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVP 399
Cdd:PRK10015 321 IASAQAAATTVIAAKERADFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNDMFTIDGKPNQ 400

                        410       420
                 ....*....|....*....|....*....
gi 16764703  400 PLRKTILSHAKKIGLVNLLKDGIKGATAL 428
Cdd:PRK10015 401 PVRKMIMGHAKKIGLINLLKDGIKGATAL 429
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 1-428 0e+00

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 548.74  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGFATSAPIERVVTREKISFL 80
Cdd:PRK10157   1 MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFM 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   81 TEESAVTLDFHRAPPTPPL-TSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILAD 159
Cdd:PRK10157  81 TEKSAMTMDYCNGDETSPSqRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILAD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  160 GVNSMLGRSLDMVPVSSAHHYAVGVKELIGLSPALIEERFNLASHEGAAWLFAGAPSNGLMGGGFLYTNRDSVSLGLVCG 239
Cdd:PRK10157 161 GVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCG 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  240 LGDIAHATKSVPQMLEDFKQHPAIRPLIQGGTLLEYSAHMVPEGGIAMMPELANDGVMIVGDAAGLCLNLGYTVRGMDLA 319
Cdd:PRK10157 241 LHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLA 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  320 IASAQAAAQTAIDAKARQDFSAASLAGYKRALEkNGVLRDMRHFRKLPGLMENPRLFTEYPRMAANIVGDLFTVDGGPVP 399
Cdd:PRK10157 321 IAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLE-SGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPE 399

                        410       420
                 ....*....|....*....|....*....
gi 16764703  400 PLRKTILSHAKKIGLVNLLKDGIKGATAL 428
Cdd:PRK10157 400 LMRKKILRHGKKVGFINLIKDGMKGVTVL 428
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
13-353 8.77e-46

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 159.75  E-value: 8.77e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  13 AGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLyAHSIESIMPgFATSAPIERVVTREKISFLTEESAVTldfhr 92
Cdd:COG0644   1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLL-PRALEELEP-LGLDEPLERPVRGARFYSPGGKSVEL----- 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  93 apPTPPLTSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTgVQAGDDI-LDANIVILADGVNSMLGRSLDM 171
Cdd:COG0644  74 --PPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRDDGRVV-VRTGDGEeIRADYVVDADGARSLLARKLGL 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703 172 VPVSSA-HHYAVGVKELIGLSPALIEErfnlashEGAAWLFAGAPSNGlmGGGFLYT-NRDSVSLGlvcglgdiahatks 249
Cdd:COG0644 151 KRRSDEpQDYALAIKEHWELPPLEGVD-------PGAVEFFFGEGAPG--GYGWVFPlGDGRVSVG-------------- 207

                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703 250 vpqmledfkqhpairpliqggtlleysahmVPEGGIAmmPELANDGVMIVGDAAGLClnLGYTVRGMDLAIASAQAAAQT 329
Cdd:COG0644 208 ------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFV--DPLTGEGIHLAMKSGRLAAEA 253

                       330       340
                ....*....|....*....|....
gi 16764703 330 AIDAKARQDFSAASLAGYKRALEK 353
Cdd:COG0644 254 IAEALEGGDFSAEALAEYERRLRE 277
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 6-305 7.60e-20

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 89.30  E-value: 7.60e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     6 FDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNMTGGRLYAHSIESIMPGfatSAPIERVVTREKISFlteesa 85
Cdd:TIGR02032   1 YDVVVVGAGPAGASAAYRLADKGLRVLLLEKKSFPRYKPCGGALSPRALEELDLPG---ELIVNLVRGARFFSP------ 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    86 vTLDFHRAPPTPPLtSYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDI-LDANIVILADGVNSM 164
Cdd:TIGR02032  72 -NGDSVEIPIETEL-AYVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRGSEGtVTAKIVIGADGSRSI 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   165 LGRSLDMVPvsSAHHYAVGVKELIGLSPALIEERFNL------ASHEGAAWLFAGApsnglmgggflytnRDSVSLGLVc 238
Cdd:TIGR02032 150 VAKKLGLKK--EPREYGVAARAEVEMPDEEVDEDFVEvyidrgIVPGGYGWVFPKG--------------DGTANVGVG- 212

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16764703   239 glGDIAHATKSVPQMLEDFKQHpaiRPLIQGGTLLEYSAHMVPEGGIAMmpELANDGVMIVGDAAGL 305
Cdd:TIGR02032 213 --SRSAEEGEDPKKYLKDFLAR---RPELKDAETVEVCGALIPIGRPDE--KLVRGNVLLVGDAAGH 272
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-197 2.53e-15

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 76.52  E-value: 2.53e-15
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   5 KFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGsknmTGGRLYAHSIES--------IMPGF-ATSAPIERVVTRE 75
Cdd:COG0654   3 RTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPR----PDGRGIALSPRSlellrrlgLWDRLlARGAPIRGIRVRD 78

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  76 KisfLTEESAVTLDFHRAPPTPPltsYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIV 155
Cdd:COG0654  79 G---SDGRVLARFDAAETGLPAG---LVVPRADLERALLEAARALGVELRFGTEVTGLEQDADGVTVTLADGRTLRADLV 152

                       170       180       190       200
                ....*....|....*....|....*....|....*....|..
gi 16764703 156 ILADGVNSMLGRSLDMVPVSSAHHYAVGVkelIGLSPALIEE 197
Cdd:COG0654 153 VGADGARSAVRRLLGIGFTGRDYPQRALW---AGVRTELRAR 191
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
5-213 2.96e-14

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 73.79  E-value: 2.96e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   5 KFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER--------GNSAG-----SKNMTGGRLYAHSIESI--MPGFATSAPIE 69
Cdd:COG0665   2 TADVVVIGGGIAGLSTAYHLARRGLDVTVLERgrpgsgasGRNAGqlrpgLAALADRALVRLAREALdlWRELAAELGID 81

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  70 ---------RVVTREK------------------ISFLTEESAVtldfHRAPP--TPPLTSYTVLRN--KLDPWLMAQ-- 116
Cdd:COG0665  82 cdfrrtgvlYLARTEAelaalraeaealralglpVELLDAAELR----EREPGlgSPDYAGGLYDPDdgHVDPAKLVRal 157

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703 117 ---AEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILA-----DGVNSMLGRSLDMVPVSSaHHYAVGVKELI 188
Cdd:COG0665 158 araARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAagawsARLLPMLGLRLPLRPVRG-YVLVTEPLPDL 236

                       250       260
                ....*....|....*....|....*
gi 16764703 189 GLSPALIEERFNLASHEGAAWLFAG 213
Cdd:COG0665 237 PLRPVLDDTGVYLRPTADGRLLVGG 261
PLN00093 PLN00093
geranylgeranyl diphosphate reductase; Provisional
 2-304 6.60e-11

geranylgeranyl diphosphate reductase; Provisional


Pssm-ID: 177713 [Multi-domain]  Cd Length: 450  Bit Score: 64.00  E-value: 6.60e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    2 SDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERgNSAGSKNMTGgrlyahSIESIMPG-FatSAP---IERVVTREKI 77
Cdd:PLN00093  36 SGRKLRVAVIGGGPAGACAAETLAKGGIETFLIER-KLDNAKPCGG------AIPLCMVGeF--DLPldiIDRKVTKMKM 106

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   78 sflTEESAVTLDFHRappTPPLTSY--TVLRNKLDPWLMAQAEQAGAQFIPGV--RVDA--------LVREGNRVTGVQA 145
Cdd:PLN00093 107 ---ISPSNVAVDIGK---TLKPHEYigMVRREVLDSFLRERAQSNGATLINGLftRIDVpkdpngpyVIHYTSYDSGSGA 180

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  146 GD-DILDANIVILADGVNSMLGRSLDmvpvSSAHHYAVGVKELIGLSPALIEERFNLA--------SHEGAAWLFAGAps 216
Cdd:PLN00093 181 GTpKTLEVDAVIGADGANSRVAKDID----AGDYDYAIAFQERIKIPDDKMEYYEDLAemyvgddvSPDFYGWVFPKC-- 254

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  217 nglmgggflytnrDSVSLglvcGLGDIAHATksvpqmleDFKQHP-AIR----PLIQGGTLLEYSAHMVPEggiAMMPEL 291
Cdd:PLN00093 255 -------------DHVAV----GTGTVVNKP--------AIKKYQrATRnrakDKIAGGKIIRVEAHPIPE---HPRPRR 306

                        330
                 ....*....|...
gi 16764703  292 ANDGVMIVGDAAG 304
Cdd:PLN00093 307 VRGRVALVGDAAG 319
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 3-161 7.66e-11

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 63.70  E-value: 7.66e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIE-----RGNSAgsknMTGGRLYAH-----------SIESIM------- 59
Cdd:COG1053   1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEkvpprGGHTA----AAQGGINAAgtnvqkaagedSPEEHFydtvkgg 76

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  60 PGFATSAPIERVVTR--EKISFLtEESAVTLDFHRAPPTPPLTSYTVLR---------NKLDPWLMAQAEQAGAQFIPGV 128
Cdd:COG1053  77 DGLADQDLVEALAEEapEAIDWL-EAQGVPFSRTPDGRLPQFGGHSVGRtcyagdgtgHALLATLYQAALRLGVEIFTET 155

                       170       180       190
                ....*....|....*....|....*....|...
gi 16764703 129 RVDALVREGNRVTGVQAgDDILDANIVILADGV 161
Cdd:COG1053 156 EVLDLIVDDGRVVGVVA-RDRTGEIVRIRAKAV 187
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 7-145 8.92e-09

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 56.91  E-value: 8.92e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIE-----RGNSA---------GSKNMTGGRLYAHSIESIMPGFATSAPIERVV 72
Cdd:pfam00890   1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEkgqpfGGATAwssggidalGNPPQGGIDSPELHPTDTLKGLDELADHPYVE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    73 T-----REKISFLTEESavtLDFHRAPPTP------------PLTSYTVLRNKLDPW--------LMAQAEQAGAQFIPG 127
Cdd:pfam00890  81 AfveaaPEAVDWLEALG---VPFSRTEDGHldlrplgglsatWRTPHDAADRRRGLGtghallarLLEGLRKAGVDFQPR 157

                         170
                  ....*....|....*...
gi 16764703   128 VRVDALVREGNRVTGVQA 145
Cdd:pfam00890 158 TAADDLIVEDGRVTGAVV 175
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 7-156 2.15e-08

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 55.69  E-value: 2.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSkNMTGGRLYAhsiesIMPGFATSAPIERVVTREkisFLTEesav 86
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGAKVLLVERRGFLGG-MLTSGLVGP-----DMGFYLNKEQVVGGIARE---FRQR---- 67

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    87 tLDFHRAPPTPPLTSYT-------VLRNKLDPWLmaqaEQAGAQFIPGVRVDALVREGNRVTGVQ----AGDDILDANIV 155
Cdd:pfam12831  68 -LRARGGLPGPYGLRGGwvpfdpeVAKAVLDEML----AEAGVTVLLHTRVVGVVKEGGRITGVTvetkGGRITIRAKVF 142


                  .
gi 16764703   156 I 156
Cdd:pfam12831 143 I 143
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 4-62 4.16e-08

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 55.24  E-value: 4.16e-08
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 16764703   4 DKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAgsknmtGGRlyAHSIEsiMPGF 62
Cdd:COG1233   2 MMYDVVVIGAGIGGLAAAALLARAGYRVTVLEKNDTP------GGR--ARTFE--RPGF 50
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
1-37 1.14e-07

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 53.58  E-value: 1.14e-07
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 16764703   1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERG 37
Cdd:COG2509  26 IPSLKYDVVIVGAGPAGLFAALELAEAGLKPLVLERG 62
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 7-182 1.38e-07

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 53.17  E-value: 1.38e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAG---SKNMTG--------------GRLYAHSIESI----------- 58
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGsgaSGRNAGlihpglrylepselARLALEALDLWeeleeelgidc 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    59 ---MPG---FATSAPIERVVTREKISFLTEESAVTLDFHRAPPTPPLTSYTV--LRNK----LDP-----WLMAQAEQAG 121
Cdd:pfam01266  81 gfrRCGvlvLARDEEEEALEKLLAALRRLGVPAELLDAEELRELEPLLPGLRggLFYPdgghVDParllrALARAAEALG 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16764703   122 AQFIPGVRVDALVREGNRVTGVQAGddilDANIVILADGVNSMLGRSLDM-VPVSSAHHYAV 182
Cdd:pfam01266 161 VRIIEGTEVTGIEEEGGVWGVVTTG----EADAVVNAAGAWADLLALPGLrLPVRPVRGQVL 218
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 7-169 1.75e-07

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 52.71  E-value: 1.75e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAgSKNMTGGRLYAHSIESI-MPGFATSApIERVVTREKISFLTE--E 83
Cdd:pfam01494   3 DVLIVGGGPAGLMLALLLARAGVRVVLVERHATT-SVLPRAHGLNQRTMELLrQAGLEDRI-LAEGVPHEGMGLAFYntR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    84 SAVTLDFHRAPPTPpltsYTVLRNKLDPWLMAQAEQAGAQFIPGVRVDALVREGNRVTGV---QAGDDI--LDANIVILA 158
Cdd:pfam01494  81 RRADLDFLTSPPRV----TVYPQTELEPILVEHAEARGAQVRFGTEVLSLEQDGDGVTAVvrdRRDGEEytVRAKYLVGC 156

                         170
                  ....*....|.
gi 16764703   159 DGVNSMLGRSL 169
Cdd:pfam01494 157 DGGRSPVRKTL 167
PRK00711 PRK00711
D-amino acid dehydrogenase;
113-163 2.87e-07

D-amino acid dehydrogenase;


Pssm-ID: 234819 [Multi-domain]  Cd Length: 416  Bit Score: 52.49  E-value: 2.87e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 16764703  113 LMAQAEQAGAQFIPGVRVDALVREGNRVTGVQAGDDILDANIVILADGVNS 163
Cdd:PRK00711 207 LAAMAEQLGVKFRFNTPVDGLLVEGGRITGVQTGGGVITADAYVVALGSYS 257
PRK07121 PRK07121
FAD-binding protein;
3-52 6.81e-07

FAD-binding protein;


Pssm-ID: 180854 [Multi-domain]  Cd Length: 492  Bit Score: 51.43  E-value: 6.81e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 16764703    3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSA-GSKNMTGGRLYA 52
Cdd:PRK07121  18 DDEADVVVVGFGAAGACAAIEAAAAGARVLVLERAAGAgGATALSGGVIYL 68
PRK06185 PRK06185
FAD-dependent oxidoreductase;
10-175 9.00e-07

FAD-dependent oxidoreductase;


Pssm-ID: 235729 [Multi-domain]  Cd Length: 407  Bit Score: 50.63  E-value: 9.00e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   10 VVGAGVAGTVAAYVMAKAGLDVLVIE---------RGNSagsknmtggrLYAHSIE-----SIMPGFATsAPIERVvtrE 75
Cdd:PRK06185  11 IVGGGPAGMMLGLLLARAGVDVTVLEkhadflrdfRGDT----------VHPSTLElmdelGLLERFLE-LPHQKV---R 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   76 KISFLTEESAVTL-DFHRAPptppltsytvLRNKLdPWLMAQ-------AEQAGA----QFIPGVRVDALVREGNRVTGV 143
Cdd:PRK06185  77 TLRFEIGGRTVTLaDFSRLP----------TPYPY-IAMMPQwdfldflAEEASAypnfTLRMGAEVTGLIEEGGRVTGV 145

                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 16764703  144 QA----GDDILDANIVILADGVNSMLGRSLDMVPVS 175
Cdd:PRK06185 146 RArtpdGPGEIRADLVVGADGRHSRVRALAGLEVRE 181
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
10-41 1.35e-06

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 45.60  E-value: 1.35e-06
                          10        20        30
                  ....*....|....*....|....*....|..
gi 16764703    10 VVGAGVAGTVAAYVMAKAGLDVLVIERGNSAG 41
Cdd:pfam13450   1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLG 32
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
7-51 1.73e-06

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 49.92  E-value: 1.73e-06
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*
gi 16764703   7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIErgnsagSKNMTGGRLY 51
Cdd:COG1231   9 DVVIVGAGLAGLAAARELRKAGLDVTVLE------ARDRVGGRVW 47
COG3573 COG3573
Predicted oxidoreductase [General function prediction only];
1-40 4.49e-06

Predicted oxidoreductase [General function prediction only];


Pssm-ID: 442794 [Multi-domain]  Cd Length: 551  Bit Score: 48.64  E-value: 4.49e-06
                        10        20        30        40
                ....*....|....*....|....*....|....*....|
gi 16764703   1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSA 40
Cdd:COG3573   1 MAAMDADVIVVGAGLAGLVAAAELADAGRRVLLLDQEPEA 40
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 1-41 5.84e-06

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 48.32  E-value: 5.84e-06
                        10        20        30        40
                ....*....|....*....|....*....|....*....|.
gi 16764703   1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAG 41
Cdd:COG2072   2 AATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVG 42
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 3-38 7.10e-06

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 48.16  E-value: 7.10e-06
                        10        20        30
                ....*....|....*....|....*....|....*.
gi 16764703   3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGN 38
Cdd:COG1249   1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALVEKGR 36
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 7-143 1.74e-05

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 45.93  E-value: 1.74e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     7 DAIVVGAGVAGTVAAYVMAKA-GLDVLVIERGNSAGSKNMTGGRLYAhsiesimpgfatsapieRVVTREKISFLTEESA 85
Cdd:pfam01946  19 DVVIVGAGSSGLTAAYYLAKNrGLKVAIIERSVSPGGGAWLGGQLFS-----------------AMVVRKPAHLFLDEFG 81

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 16764703    86 VTLDFHRapptpplTSYTVLRNKLDP-WLMAQAEQ-AGAQFIPGVRV-DALVREGNRVTGV 143
Cdd:pfam01946  82 IPYEDEG-------DYVVVKHAALFTsTLMSKALQlPNVKLFNATSVeDLIVRPGVGVAGV 135
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 2-37 2.07e-05

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 46.74  E-value: 2.07e-05
                        10        20        30
                ....*....|....*....|....*....|....*..
gi 16764703   2 SDDKFDAIVVGAGVAGTVAAYVMAK-AGLDVLVIERG 37
Cdd:COG2303   1 MLEEYDYVIVGAGSAGCVLANRLSEdAGLRVLLLEAG 37
PRK06370 PRK06370
FAD-containing oxidoreductase;
1-37 2.12e-05

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 46.73  E-value: 2.12e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERG 37
Cdd:PRK06370   1 TPAQRYDAIVIGAGQAGPPLAARAAGLGMKVALIERG 37
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
1-41 2.32e-05

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 46.30  E-value: 2.32e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAG 41
Cdd:PRK05249   1 MHMYDYDLVVIGSGPAGEGAAMQAAKLGKRVAVIERYRNVG 41
PRK12834 PRK12834
putative FAD-binding dehydrogenase; Reviewed
 7-40 2.63e-05

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 183782 [Multi-domain]  Cd Length: 549  Bit Score: 46.43  E-value: 2.63e-05
                         10        20        30
                 ....*....|....*....|....*....|....
gi 16764703    7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSA 40
Cdd:PRK12834   6 DVIVVGAGLAGLVAAAELADAGKRVLLLDQENEA 39
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 7-41 3.58e-05

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 45.98  E-value: 3.58e-05
                        10        20        30
                ....*....|....*....|....*....|....*
gi 16764703   7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAG 41
Cdd:COG1232   3 RVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVG 37
PTZ00367 PTZ00367
squalene epoxidase; Provisional
 6-36 4.27e-05

squalene epoxidase; Provisional


Pssm-ID: 240384 [Multi-domain]  Cd Length: 567  Bit Score: 45.61  E-value: 4.27e-05
                         10        20        30
                 ....*....|....*....|....*....|.
gi 16764703    6 FDAIVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PTZ00367  34 YDVIIVGGSIAGPVLAKALSKQGRKVLMLER 64
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 4-38 4.45e-05

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 45.55  E-value: 4.45e-05
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 16764703    4 DKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGN 38
Cdd:PRK06292   2 EKYDVIVIGAGPAGYVAARRAAKLGKKVALIEKGP 36
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
2-175 4.73e-05

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 45.52  E-value: 4.73e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   2 SDDKFDAIVVGAGVAGTVAAYVMAKA-GLDVLVIERG----------NSA----------GS----KNMTGGRLY----- 51
Cdd:COG0579   1 MMEMYDVVIIGAGIVGLALARELSRYeDLKVLVLEKEddvaqessgnNSGvihaglyytpGSlkarLCVEGNELFyelcr 80

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  52 AHSIESIMPG---FATSA----------------PIE--RVVTREKIsfLTEESAVTLDFHRA---PptpplTSYTVlrn 107
Cdd:COG0579  81 ELGIPFKRCGklvVATGEeevafleklyergkanGVPglEILDREEL--RELEPLLSDEGVAAlysP-----STGIV--- 150

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703 108 klDPW-----LMAQAEQAGAQFIPGVRVDALVREGNRVTgVQAGDDILDANIVILADGVNS-----MLGRSLDM--VPVS 175
Cdd:COG0579 151 --DPGaltraLAENAEANGVELLLNTEVTGIEREGDGWE-VTTNGGTIRARFVINAAGLYAdrlaqMAGIGKDFgiFPVK 227
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 6-90 5.23e-05

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 45.00  E-value: 5.23e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703     6 FDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNsagskNMTGGRL--------YAHSIESIMPGFATSAPIERVVTR--E 75
Cdd:pfam07992   1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIEDEG-----TCPYGGCvlskallgAAEAPEIASLWADLYKRKEEVVKKlnN 75

                          90
                  ....*....|....*
gi 16764703    76 KISFLTEESAVTLDF 90
Cdd:pfam07992  76 GIEVLLGTEVVSIDP 90
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
1-48 6.49e-05

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 45.03  E-value: 6.49e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER-GNSAGSKNMTGG 48
Cdd:PRK07843   3 MTVQEYDVVVVGSGAAGMVAALTAAHRGLSTVVVEKaPHYGGSTARSGG 51
soxA_mon TIGR01377
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ...
 6-41 1.21e-04

sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]


Pssm-ID: 130444 [Multi-domain]  Cd Length: 380  Bit Score: 44.05  E-value: 1.21e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 16764703     6 FDAIVVGAGVAGTVAAYVMAKAGLDVLVIE-------RGNSAG 41
Cdd:TIGR01377   1 FDVIVVGAGIMGCFAAYHLAKHGKKTLLLEqfdlphsRGSSHG 43
PRK08274 PRK08274
FAD-dependent tricarballylate dehydrogenase TcuA;
2-160 1.44e-04

FAD-dependent tricarballylate dehydrogenase TcuA;


Pssm-ID: 236214 [Multi-domain]  Cd Length: 466  Bit Score: 44.10  E-value: 1.44e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    2 SDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER-------GNSAGSKNMtggRLYAHSIESIMPGFATS----APIER 70
Cdd:PRK08274   1 MASMVDVLVIGGGNAALCAALAAREAGASVLLLEAaprewrgGNSRHTRNL---RCMHDAPQDVLVGAYPEeefwQDLLR 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   71 V---VTREKIS-FLTEESAVTLDFHRAPP---TPPLTSYTVL-RNKLDPW---------LMAQAEQAGAQFIPGVRVDAL 133
Cdd:PRK08274  78 VtggRTDEALArLLIRESSDCRDWMRKHGvrfQPPLSGALHVaRTNAFFWgggkalvnaLYRSAERLGVEIRYDAPVTAL 157

                        170       180       190
                 ....*....|....*....|....*....|..
gi 16764703  134 VREGNRVTGVQAGDD-----ILDANIVILADG 160
Cdd:PRK08274 158 ELDDGRFVGARAGSAaggaeRIRAKAVVLAAG 189
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
7-81 2.28e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 43.31  E-value: 2.28e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16764703   7 DAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSagsknmTGGRL--YAHSIESIMPGFATSAP-IERVVTREKISFLT 81
Cdd:COG1148 142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPE------LGGRAaqLHKTFPGLDCPQCILEPlIAEVEANPNITVYT 213
PRK12843 PRK12843
FAD-dependent oxidoreductase;
3-36 2.35e-04

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 43.57  E-value: 2.35e-04
                         10        20        30
                 ....*....|....*....|....*....|....
gi 16764703    3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PRK12843  14 DAEFDVIVIGAGAAGMSAALFAAIAGLKVLLVER 47
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
6-161 2.45e-04

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 42.80  E-value: 2.45e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   6 FDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGnsagsknMTGGRLY-AHSIESImPGFatsapiervvtREKISfltees 84
Cdd:COG0492   1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEGG-------EPGGQLAtTKEIENY-PGF-----------PEGIS------ 55

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703  85 avtldfhrapptppltsytvlrnklDPWLM----AQAEQAGAQFIPGvRVDALVREGN--RVTGvqAGDDILDANIVILA 158
Cdd:COG0492  56 -------------------------GPELAerlrEQAERFGAEILLE-EVTSVDKDDGpfRVTT--DDGTEYEAKAVIIA 107


                ...
gi 16764703 159 DGV 161
Cdd:COG0492 108 TGA 110
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 3-51 3.82e-04

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 42.82  E-value: 3.82e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|
gi 16764703    3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNS-AGSKNMTGGRLY 51
Cdd:PRK12844   4 DETYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQDKvGGSTAMSGGVLW 53
solA PRK11259
N-methyl-L-tryptophan oxidase;
5-36 4.33e-04

N-methyl-L-tryptophan oxidase;


Pssm-ID: 236887 [Multi-domain]  Cd Length: 376  Bit Score: 42.13  E-value: 4.33e-04
                         10        20        30
                 ....*....|....*....|....*....|..
gi 16764703    5 KFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PRK11259   3 RYDVIVIGLGSMGSAAGYYLARRGLRVLGLDR 34
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 1-36 5.37e-04

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 42.37  E-value: 5.37e-04
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PRK12842   5 TNELTCDVLVIGSGAGGLSAAITARKLGLDVVVLEK 40
PLN02985 PLN02985
squalene monooxygenase
 2-170 5.59e-04

squalene monooxygenase


Pssm-ID: 178566 [Multi-domain]  Cd Length: 514  Bit Score: 42.20  E-value: 5.59e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703    2 SDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSAGSKNM-----TGGRLYAHS------IESIMPGFATSAPIER 70
Cdd:PLN02985  40 KDGATDVIIVGAGVGGSALAYALAKDGRRVHVIERDLREPERMMgefmqPGGRFMLSKlgledcLEGIDAQKATGMAVYK 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   71 VVTREKISFlteesavTLDFHRAPPTPPLTSYTVLRnkldpwlMAQAEQAGAQFIPGVR-----VDALVREGNRVTGV-- 143
Cdd:PLN02985 120 DGKEAVAPF-------PVDNNNFPYEPSARSFHNGR-------FVQRLRQKASSLPNVRleegtVKSLIEEKGVIKGVty 185

                        170       180       190
                 ....*....|....*....|....*....|
gi 16764703  144 --QAGDDILD-ANIVILADGVNSMLGRSLD 170
Cdd:PLN02985 186 knSAGEETTAlAPLTVVCDGCYSNLRRSLN 215
PLN02576 PLN02576
protoporphyrinogen oxidase
 7-43 5.74e-04

protoporphyrinogen oxidase


Pssm-ID: 215314 [Multi-domain]  Cd Length: 496  Bit Score: 41.92  E-value: 5.74e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 16764703    7 DAIVVGAGVAGTVAAY-VMAKAGLDVLVIERGNSAGSK 43
Cdd:PLN02576  14 DVAVVGAGVSGLAAAYaLASKHGVNVLVTEARDRVGGN 51
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
5-40 6.48e-04

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 41.76  E-value: 6.48e-04
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 16764703    5 KFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNSA 40
Cdd:PRK05329   2 KFDVLVIGGGLAGLTAALAAAEAGKRVALVAKGQGA 37
PRK07233 PRK07233
hypothetical protein; Provisional
 10-41 6.88e-04

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 41.80  E-value: 6.88e-04
                         10        20        30
                 ....*....|....*....|....*....|..
gi 16764703   10 VVGAGVAGTVAAYVMAKAGLDVLVIERGNSAG 41
Cdd:PRK07233   4 IVGGGIAGLAAAYRLAKRGHEVTVFEADDQLG 35
GIDA pfam01134
Glucose inhibited division protein A;
7-34 1.47e-03

Glucose inhibited division protein A;


Pssm-ID: 250388 [Multi-domain]  Cd Length: 391  Bit Score: 40.61  E-value: 1.47e-03
                          10        20
                  ....*....|....*....|....*...
gi 16764703     7 DAIVVGAGVAGTVAAYVMAKAGLDVLVI 34
Cdd:pfam01134   1 DVIVIGGGHAGCEAALAAARMGAKVLLI 28
PRK00711 PRK00711
D-amino acid dehydrogenase;
9-36 1.67e-03

D-amino acid dehydrogenase;


Pssm-ID: 234819 [Multi-domain]  Cd Length: 416  Bit Score: 40.55  E-value: 1.67e-03
                         10        20
                 ....*....|....*....|....*...
gi 16764703    9 IVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PRK00711   4 VVLGSGVIGVTSAWYLAQAGHEVTVIDR 31
MnmG COG0445
tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal ...
 3-34 2.22e-03

tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA [Translation, ribosomal structure and biogenesis]; tRNA U34 5-carboxymethylaminomethyl modifying enzyme MnmG/GidA is part of the Pathway/BioSystem: tRNA modification


Pssm-ID: 440214 [Multi-domain]  Cd Length: 626  Bit Score: 40.37  E-value: 2.22e-03
                        10        20        30
                ....*....|....*....|....*....|..
gi 16764703   3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVI 34
Cdd:COG0445   4 PKEYDVIVVGGGHAGCEAALAAARMGAKTLLL 35
PRK07208 PRK07208
hypothetical protein; Provisional
 1-36 2.30e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 40.26  E-value: 2.30e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 16764703    1 MSDDKfDAIVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PRK07208   1 MTNKK-SVVIIGAGPAGLTAAYELLKRGYPVTVLEA 35
NirB COG1251
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
8-161 3.06e-03

NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];


Pssm-ID: 440863 [Multi-domain]  Cd Length: 402  Bit Score: 39.74  E-value: 3.06e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16764703   8 AIVVGAGVAGTVAAYVMAKAGLDVLVIERGnsagsknmtggrlyahsiESIMPgfatsapieRVvtrekisfLTEESAvt 87
Cdd:COG1251 145 VVVIGGGLIGLEAAAALRKRGLEVTVVERA------------------PRLLP---------RQ--------LDEEAG-- 187

                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 16764703  88 ldfhrapptppltsyTVLRNKLdpwlmaqaEQAGAQFIPGVRVDALVREGnRVTGVQ-AGDDILDANIVILADGV 161
Cdd:COG1251 188 ---------------ALLQRLL--------EALGVEVRLGTGVTEIEGDD-RVTGVRlADGEELPADLVVVAIGV 238
PRK12835 PRK12835
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 3-70 3.52e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 237221 [Multi-domain]  Cd Length: 584  Bit Score: 39.79  E-value: 3.52e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16764703    3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGNS-AGSKNMTGGRLYahsiesiMPGfatsAPIER 70
Cdd:PRK12835   9 DREVDVLVVGSGGGGMTAALTAAARGLDTLVVEKSAHfGGSTALSGGGIW-------VPG----APAQR 66
ubiF PRK08020
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
 1-36 4.07e-03

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed


Pssm-ID: 181199 [Multi-domain]  Cd Length: 391  Bit Score: 39.20  E-value: 4.07e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PRK08020   1 MTNQPTDIAIVGGGMVGAALALGLAQHGFSVAVLEH 36
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 2-38 5.61e-03

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 38.97  E-value: 5.61e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 16764703    2 SDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIERGN 38
Cdd:PRK06416   1 FAFEYDVIVIGAGPGGYVAAIRAAQLGLKVAIVEKEK 37
PRK09126 PRK09126
FAD-dependent hydroxylase;
3-36 6.91e-03

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 38.38  E-value: 6.91e-03
                         10        20        30
                 ....*....|....*....|....*....|....
gi 16764703    3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PRK09126   1 MMHSDIVVVGAGPAGLSFARSLAGSGLKVTLIER 34
sdhA PRK06452
succinate dehydrogenase flavoprotein subunit; Reviewed
 1-36 7.91e-03

succinate dehydrogenase flavoprotein subunit; Reviewed


Pssm-ID: 180567 [Multi-domain]  Cd Length: 566  Bit Score: 38.33  E-value: 7.91e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 16764703    1 MSDDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVIER 36
Cdd:PRK06452   1 MEKIEYDAVVIGGGLAGLMSAHEIASAGFKVAVISK 36
PTZ00139 PTZ00139
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
 3-34 8.16e-03

Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional


Pssm-ID: 240286 [Multi-domain]  Cd Length: 617  Bit Score: 38.57  E-value: 8.16e-03
                         10        20        30
                 ....*....|....*....|....*....|..
gi 16764703    3 DDKFDAIVVGAGVAGTVAAYVMAKAGLDVLVI 34
Cdd:PTZ00139  27 DHTYDAVVVGAGGAGLRAALGLVELGYKTACI 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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