|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15255 |
PRK15255 |
fimbrial outer membrane usher protein StdB; Provisional |
1-829 |
0e+00 |
|
fimbrial outer membrane usher protein StdB; Provisional
Pssm-ID: 185167 [Multi-domain] Cd Length: 829 Bit Score: 1654.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 1 MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGLDA 80
Cdd:PRK15255 1 MKITRLAILITLTFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGRDA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 81 AVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVT 160
Cdd:PRK15255 81 AVICVTTDMVAMLGLKDKIIHGLKPVTGIPDGQCLELRSADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 161 AGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG 240
Cdd:PRK15255 161 AGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPALRSKLTLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 241 QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLD 320
Cdd:PRK15255 241 QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLD 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 321 VSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQ 400
Cdd:PRK15255 321 VSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGAFNNTSLYGGLIASTGDYQ 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 401 SAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRTTDGG 480
Cdd:PRK15255 401 SAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRATDGG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 481 DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSLNKVFSLGDLQGLSASVSFARNQYTGGGSQNQVYA 560
Cdd:PRK15255 481 DAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSFNKVFSLGDLQGLSASVSFARNQYTGGGSQNQVYA 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 561 TISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQ 640
Cdd:PRK15255 561 TISIPWGDSRQVSYSVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSVQSRLPWGQAAADATLQPGQ 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 641 YRSLGLSWYGSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED 720
Cdd:PRK15255 641 YRSLGLSWYGSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPED 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 721 VDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSWKTGRTAGMVGDGGLAYLTGLSGEDRRTLN 800
Cdd:PRK15255 721 VDVSSSVISQVLTEGAVGYRKIDASQGEQVLGHIRLADGASPPFGALVVSGKTGRTAGMVGDDGLAYLTGLSGEDRRTLN 800
|
810 820
....*....|....*....|....*....
gi 16766330 801 VSWDGRVQCRLTLPETVTLSRGPLLLPCR 829
Cdd:PRK15255 801 VSWDGRVQCRLTLPETVTLSRGPLLLPCR 829
|
|
| FimD |
COG3188 |
Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]; |
2-829 |
0e+00 |
|
Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures];
Pssm-ID: 442421 [Multi-domain] Cd Length: 817 Bit Score: 779.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 2 KITRLAILITLTFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVrEQYPVRVVPVAGLDAA 81
Cdd:COG3188 6 RLALLLLLLLALAAAAAAAAVEFNPAFLDGDDAAAIDLSRFSRGNYVPPGTYYLDVYVNGQPL-GRGDITFVADRDDGRL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 82 VICVTTDMVAMLGLKDKIIHGLKPvtgiPDGQCLELRS-ADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVT 160
Cdd:COG3188 85 QPCLTPELLEQLGLKLDALPALLA----ADGQCVDLSAiPGASVRFDFATQRLDLSVPQAALPYQARGYVPPSLWDDGIP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 161 AGLLDYSLMVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDfylpQTYLFRALPALRSKLTLG 240
Cdd:COG3188 161 ALLLNYDLNASRSRGRSGSASESRYLGLNSGLNLGAWRLRNNSSYSYSSGGGSGWQRL----DTYLQRDIPALRSQLTLG 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 241 QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDL-SQNISGNL 319
Cdd:COG3188 237 DSYTSSDWFDSVRFRGVQLASDFRMLPDSLRGYAPVVRGIAASNATVTVRQNGYVIYQTTVPPGPFEINDLpPTGGAGDL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 320 DVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNstvSPDFLLGEATWGAFNNTSLYGGLIAStGDY 399
Cdd:COG3188 317 DVTVTEADGREQTFTVPFASVPQLLRPGLSRYSLAAGRYRRNGSFDY---GPPFAQGTLRYGLSNGLTLYGGAEAA-EDY 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 400 QSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRTTDG 479
Cdd:COG3188 393 QAGGLGAGFNLGALGALSADVTQSRARLPDDDTGSGQSYRLGYSKSFDETGTNFSLAGYRYSTRGYRDLSDALDARDSGG 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 480 G-DAWHEKQSYTVTYSQSVPvLNMSAALSVSRLNYWN-AQSNNNYMLSLNKVFslgdlQGLSASVSFARNQYTGGGSQNQ 557
Cdd:COG3188 473 DnSSYRPRSRFQATLSQSLG-DGGSLYLSYSQQDYWDgSGRTRSYSLGYSNSL-----RNISYSLSASRSRNGGGRRDRS 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 558 VYATISIPWGDSRQVSYSVQKDNRGGLQQTVNYSD--FHNPDTTWNISAGHNRydTGSNSSFSGSVQSRLPWGQAAADAT 635
Cdd:COG3188 547 VSLSLSIPLGNRSSASYSLSRDNGGGTSQQVGLSGsaPEDGGLGYSLSAGYGS--GGDGNSGSANLSYRGSYGTLSAGYS 624
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 636 lQPGQYRSLGLSWYGSVTATAHGAAFSQSMagNEPRMMIDTGDVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVDV 714
Cdd:COG3188 625 -YSRGYRQVSAGASGGLVAHAGGVTLSRRL--GDTFALVDAPGAAGVPVNNERGGrTDRRGYALVPYLTPYRRNRVSIDP 701
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 715 AALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSwKTGRTAGMVGDGGLAYLTGLSGE 794
Cdd:COG3188 702 LDLPDDVELDNTEQRVVPTRGAGVLVRFPTRRGRRALLTLRDADGKPLPFGAEVTD-EGGQEVGIVGQDGQVYLSGLPPQ 780
|
810 820 830
....*....|....*....|....*....|....*....
gi 16766330 795 DRrtLNVSW-DGRVQCR--LTLPETVTLSRGP-LLLPCR 829
Cdd:COG3188 781 GT--LTVKWgDGAQQCRasYTLPASADGQGIPrLPLTCR 817
|
|
| PRK15284 |
PRK15284 |
putative fimbrial outer membrane usher protein StfC; Provisional |
14-829 |
0e+00 |
|
putative fimbrial outer membrane usher protein StfC; Provisional
Pssm-ID: 185184 [Multi-domain] Cd Length: 881 Bit Score: 627.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 14 FSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVR-VVPVAGLDAAVICVTTDMVAM 92
Cdd:PRK15284 25 VNAWAEDDIQFDSRFLELKGDTKIDLKRFSSKGYVEPGKYNLQVQLNKQPLAEEYDIYwYASENDPSKTYACLTPELVAQ 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 93 LGLKDKIIHGLKpvtGIPDGQCLELRSADS-QVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVTAGLLDYSLMVN 171
Cdd:PRK15284 105 LGLKEDIAKNLQ---WIHDGKCLKPGQLEGmEIKADLSQSALVISLPQAYLEYTDPDWDPPSRWDDGIPGLIADYSINAQ 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 172 -RYMPQQGETSTSYSLYGTAGFNLGAWRLR----SDYQYSRF-----DSGQGASQSDFYLPQTYLFRALPALRSKLTLGQ 241
Cdd:PRK15284 182 tRHEENGGDDSNDISGNGTVGVNLGAWRLRadwqTNYQHTRSnddddEFSGSSTQKNWDWSRYYAWRALPSLKAKLALGE 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 242 TYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLDV 321
Cdd:PRK15284 262 DYLNSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDIGDSVSGTLHV 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 322 SVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVspdFLLGEATWGAFNNTSLYGGLIASTgDYQS 401
Cdd:PRK15284 342 RIEEQNGQVQEYDVSTASMPFLTRPGQVRYKLMMGRPQDWGHHVEGGF---FSGAEASWGIANGWSLYGGALGDE-NYQS 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 402 AALGIGQNMGLLGALSADVTRSDARLPHGQ-----KQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRT 476
Cdd:PRK15284 418 AALGVGRDLALFGAVAFDVTHSHTKLDKDSaygkgSLDGNSFRVSYAKDFDELNSRVTFAGYRFSEENFMTMSEYLDASD 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 477 TDGGDAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSLNKVFSLGDLQGLSASVSFARNQYTGGGSQN 556
Cdd:PRK15284 498 SDMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTHHTYWDRPEQTNYNLMLSHYFNMGSIRNMSISVTGYRYEYDNQADKG 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 557 qVYATISIPWGDSRQVSYSvqkDNRGGLQQTVNYSDFHNPD--TTWNISAGhnryDTGSNSSFSGSVQSRLPWGQAAADA 634
Cdd:PRK15284 578 -VYISLSIPWGDNSTVSYN---GNYGSGSDSSQVGYFSRVDdaTHYQLNVG----TSDNHTSVDGYYSHDGSLAQVDLSA 649
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 635 TLQPGQYRSLGLSWYGSVTATAHGAAF--SQSMAGNepRMMIDTGDVAGVPVNGNSGV--TNRFGVGVVSAGSSYRRSDI 710
Cdd:PRK15284 650 NYHEGQYTSAGLSLQGGATLTAHGGALhrTQNMGGT--RLLIDADGVANVPVEGNGAAvyTNMFGKAVVADVNNYYRNQA 727
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 711 SVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSwKTGRTAGMVGDGGLAYLTG 790
Cdd:PRK15284 728 YIDLNNLPEDAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLRDGSHPPFGAEVKN-DNQQQVGLVDDDGNVYLAG 806
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 16766330 791 LSGEDRrtLNVSWDGRVQCRLTLPETV--TLSRGpLLLPCR 829
Cdd:PRK15284 807 VKPGEH--MQVFWEGVAHCEINLPDPLpaDLFNG-LLLPCQ 844
|
|
| PRK15273 |
PRK15273 |
fimbrial biogenesis outer membrane usher protein; |
23-829 |
0e+00 |
|
fimbrial biogenesis outer membrane usher protein;
Pssm-ID: 185176 [Multi-domain] Cd Length: 881 Bit Score: 581.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 23 EFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQYPVR-VVPVAGLDAAVICVTTDMVAMLGLKDKIIH 101
Cdd:PRK15273 16 EFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNwVIPEHDPQGSEVCAEPELVTQLGIKPELAE 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 102 GLKPVTGiPDGQCL---ELRSADSQVRYSaeNQRLTFIIPQAWMRYQDPDWVPPSRWSDGVTAGLLDYSLMVN-RYMPQQ 177
Cdd:PRK15273 96 KLVWITH-GERQCLapdSLKGMDFQADLG--HSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQlRHDQES 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 178 GETSTSYSLYGTAGFNLGAWRLRSDYQYS---RFDSGQGASQSDFYLPQTYLFRALPALRSKLTLGQTYLSSAIFDSFRF 254
Cdd:PRK15273 173 GSEEQSISGNGTLGANLGAWRLRADWQASydhRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNY 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 255 AGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLDVSVRESDGSVRTWQ 334
Cdd:PRK15273 253 IGASVVSDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFD 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 335 VNTASVPFMARQGQVRYKVAAGRPLYGGTHnnsTVSPDFLLGEATWGAFNNTSLYGGLIASTgDYQSAALGIGQNMGLLG 414
Cdd:PRK15273 333 VNTASVPFLTRPGMVRYKMALGRPQDWDHH---PITGTFASAEASWGVTNGWSLYGGAIGES-NYQAVALGSGKDLGVVG 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 415 ALSADVTRSDARLPH-----GQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRTTDGGDAWHEKQSY 489
Cdd:PRK15273 409 AVAVDITHSIAHMPQddgfdGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERY 488
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 490 TVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNYMLSLNKVFSLGDLQGLSASVSFARNQYTgGGSQNQVYATISIPWGDS 569
Cdd:PRK15273 489 TVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYN-GDKDDGVYISLSVPWGND 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 570 rQVSYSvQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNryDTGSNSSFSGSVQSRLPWGQAAADatLQPGQYRSLGLSWY 649
Cdd:PRK15273 568 -SISYN-GTFNGSQHRNQLGYSGHSQNGDNWQLHVGQD--EQGAQADGYYSHQGALTDIDLSAD--YEEGSYRSLGMSLR 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 650 GSVTATAHGAAFSQSMAGNEPRMMIDTGDVAGVPVNGNSG--VTNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSV 727
Cdd:PRK15273 642 GGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSptSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSV 721
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 728 ISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSWKTgRTAGMVGDGGLAYLTGL-SGEdrrTLNVSWDGR 806
Cdd:PRK15273 722 VQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQ-QQLGLVADDGNAWLAGVkAGE---TLKVFWDGA 797
|
810 820
....*....|....*....|....*
gi 16766330 807 VQCRLTLPETVT--LSRGPLLLPCR 829
Cdd:PRK15273 798 AQCEASLPPTFTpeLLANALLLPCK 822
|
|
| Usher |
pfam00577 |
Outer membrane usher protein; In Gram-negative bacteria the biogenesis of fimbriae (or pili) ... |
185-741 |
3.61e-172 |
|
Outer membrane usher protein; In Gram-negative bacteria the biogenesis of fimbriae (or pili) requires a two- component assembly and transport system which is composed of a periplasmic chaperone and an outer membrane protein which has been termed a molecular 'usher'. The usher protein is rather large (from 86 to 100 Kd) and seems to be mainly composed of membrane-spanning beta-sheets, a structure reminiscent of porins. Although the degree of sequence similarity of these proteins is not very high they share a number of characteriztics. One of these is the presence of two pairs of cysteines, the first one located in the N-terminal part and the second at the C-terminal extremity that are probably involved in disulphide bonds. The best conserved region is located in the central part of these proteins.
Pssm-ID: 425762 [Multi-domain] Cd Length: 549 Bit Score: 508.38 E-value: 3.61e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 185 SLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSdfylPQTYLFRALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDER 264
Cdd:pfam00577 1 YLNLQSGLNLGAWRLRNDSNWTQSRGNTGKWQN----SRTYLQRAIPQLKSRLTLGESYTSSDIFDSFSFRGVQLASDDN 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 265 MLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQ-NISGNLDVSVRESDGSVRTWQVNTASVPFM 343
Cdd:pfam00577 77 MLPDSLRGYAPVIRGIARTNARVTIRQNGYVIYQTLVPPGPFEITDLYPtGSSGDLDVTVEEADGSVQTFTVPYSSVPLL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 344 ARQGQVRYKVAAGRPLYGgthNNSTVSPDFLLGEATWGAFNNTSLYGGLIAStGDYQSAALGIGQNMGLLGALSADVTRS 423
Cdd:pfam00577 157 LRPGQVRYSLAAGRYRSG---NSDQESPFFFQATASWGLPNGLTLYGGLQGA-DDYQAAALGLGRNLGDLGALSVDVTQS 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 424 DARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRTTDGGD---AWHEKQSYTVTYSQSVPvL 500
Cdd:pfam00577 233 RSQLDNQSSEQGQSYRFLYNKSLNETGTNFQLAGYRYSTRGFYTLADALDARMDGFDYynlTYNKKNSYQLNVSQSLG-G 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 501 NMSAALSVSRLNYWN-AQSNNNYMLSLNkvFSLGDLqGLSASVSFARNQYTgGGSQNQVYATISIPWGD-----SRQVSY 574
Cdd:pfam00577 312 WGSLYLSGSRQTYWGtSGTSYNLQLGYN--TNIGRV-SVSLSWSYSRNEYE-NGEDDLLYLNLSIPFGRglsraNSSYSM 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 575 SVQKDNRGGLQQTVNYSDFHNpDTTWNISAGhnrYDTGSNSSFSGSVQSRLPWGQAAADATLQPGqYRSLGLSWYGSVTA 654
Cdd:pfam00577 388 TRNNSGRTTSNTGVYGTLLDD-NLSYSVNAG---RASDGRHTGSGNLSYQGSYGTVSGSYSYGRD-YRQLNYSVSGGIVA 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 655 TAHGAAFSQSMagNEPRMMIDTGDVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLT 733
Cdd:pfam00577 463 HAHGVTLSQYL--GDTRALIDAPGAAGVRVNNQTGVkTDWRGYAVVPYLTPYRENRVELDTNDLPDDVDLENTVVQVVPT 540
|
....*...
gi 16766330 734 EGAVGYRK 741
Cdd:pfam00577 541 EGAVVYAR 548
|
|
| PRK09828 |
PRK09828 |
putative fimbrial outer membrane usher protein; Provisional |
2-816 |
3.75e-118 |
|
putative fimbrial outer membrane usher protein; Provisional
Pssm-ID: 182098 [Multi-domain] Cd Length: 865 Bit Score: 378.32 E-value: 3.75e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 2 KITRLAILITLTFSV--LKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQ-YPVRVVpvaGL 78
Cdd:PRK09828 12 HLTRLATFCALLYSNsaACAELVEYDHTFLMGQGASNIDLSRYSEGNPTLPGTYDVSVYVNDQPISSQsIPFIDI---GK 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 79 DAAVICVTTDMVAMLGLKDKIIHGLKPVTGIPD---GQCLELRSA--DSQVRYSAENQRLTFIIPQAWM--RYQDpdWVP 151
Cdd:PRK09828 89 KNAQACITLKNLLQFHIKSPDINNEKAILLARDdelGDCLNLTKIipQASVRYDVSDQRLDIDVPQAWVmkNYQG--YVD 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 152 PSRWSDGVTAGLLDYSLmvNRYMpQQGETSTSYSLYGT--AGFNLGAWRLRSDYQYS-RFDSGqgasqSDFYLPQTYLFR 228
Cdd:PRK09828 167 PSLWENGINAAMLSYNL--NGYH-SESPGRTNDSIYAAfnGGINLGAWRLRARGNYNwMTDSG-----SDYDFQNRYLQR 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 229 ALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFEL 308
Cdd:PRK09828 239 DIAALRSQLIIGESYTTGETFDSVSIRGIRLYSDSRMLPPGLASYAPIIRGVANSNAKVTITQSGYKIYETTVPPGAFVI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 309 PDLSQNISGN-LDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNstvsPDflLGEATW-GAFNNT 386
Cdd:PRK09828 319 DDLSPSGYGSdLIVTIEEADGSKRTFSQPFSSVVQMLRPGVGRWDISAGQVLDDSLQDE----PN--LGQASYyYGLNNY 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 387 -SLYGGLIASTGDYQSAALGIGQNMGlLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHF 465
Cdd:PRK09828 393 lTGYTGIQYTDNNYTAGLLGLGMNTS-VGAFAFDVTHSNAEIPDDKTYQGQSYRLTWNKLFEATSTSFNVAAYRYSTQDY 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 466 LSMPEYLQrrTTDG---GDAWHEKQSYT--------VTYSQSVPvLNM------SAALSVSRLNYWN-AQSNNNYMLSLN 527
Cdd:PRK09828 472 LGLNDALT--LIDEvkhPEQDLEPKSMRnysrmknqVTVSINQP-LKFekkdygSFYLSGSWSDYWAsGQSRSNYSVGYS 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 528 KVFSLGdlqglSASVSFARNQYTGGGSQNQVYATISIP----WGDSRQ------VSYSVQKDNRGGLQQTVNYSDF-HNP 596
Cdd:PRK09828 549 NSASWG-----SYSVSLQRSWNEDGEKDDSVYLSFSIPienlLGTERRssgfqsIDTQLNSDFKGNNQLNVSSSGNsEDN 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 597 DTTWNISAGHNRYDTGSN-SSFSGSVQSRLPWGQAAADATLQPGQYRSLGLSWYGSVTATAHGAAFSQ-SMAGNEPRMMI 674
Cdd:PRK09828 624 RISYSVNTGYSMNKNSKDlSYVGGYASYESPWGTLSGSASASSDNSRQYSLSTDGGFVLHSGGLTFSNdSFSDSDTLALV 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 675 DTGDVAGVPVNGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHI 754
Cdd:PRK09828 704 KAPGAKGARINYGNSTIDRWGYGVTSALSPYRENRVALDINTLENDVELKSTSAVAVPRQGAVVLADFETDQGRSAIMNI 783
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16766330 755 RLADGASPPFGALVVSwKTGRTAGMVGDGGLAYLTGLsgEDRRTLNVSWDGR---VQCRLT--LPET 816
Cdd:PRK09828 784 TRSDGKNIPFAADVYD-EQGNVIGNVGQGGQAFVRGI--EDQGELRIRWLEEgkpVSCLAHyqQPAT 847
|
|
| PRK15193 |
PRK15193 |
outer membrane usher protein; Provisional |
3-803 |
7.21e-113 |
|
outer membrane usher protein; Provisional
Pssm-ID: 237919 [Multi-domain] Cd Length: 876 Bit Score: 364.61 E-value: 7.21e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 3 ITRLAILITLTFSVLKSQATE-FNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLND----------QPVREQYPVR 71
Cdd:PRK15193 17 VPSLALGIVVFVSAGNAQAETyFNPAFLSDDPSMVADLSRFEKGAKIAAGVYRVDIVLNNtfvatrdvnfVEIKTTGKSA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 72 VVPVAGLDAaviCVTTDMVAMLGLKDKIIHGLKPVTGipdGQCLELRSA--DSQVRYSAENQRLTFIIPQAWMRYQDPDW 149
Cdd:PRK15193 97 PTDDKGLAA---CLTTESLDAMGVNTDAFPAFKQLAK---GACPPLASIipDASVTFDFNKQRLDISVPQIAIKSSARGY 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 150 VPPSRWSDGVTAGLLDYSL--MVNRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRfDSGQGASQSDFYLPQTYLF 227
Cdd:PRK15193 171 IPPERWDEGINALLLNYSFsgANSIHSSADSDSGDSYFLGLNSGVNLGPWRLRNYSTWNR-SSGQTAEDSDWQHISSYLE 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 228 RALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFE 307
Cdd:PRK15193 250 RAVIPLKGELTAGDSYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPTVRGIAKSNAQVTIKQNGYTIYQTYVSPGAFE 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 308 LPDL-SQNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLyggTHNNSTVSPDFLLGEATWGAFNNT 386
Cdd:PRK15193 330 ISDLyPTSSSGDLLVEVKEADGSINSYSVPYSAVPLLQREGRIKYAVTLAKYR---TNSNEQQEVKFAQATLQWGLPHGF 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 387 SLYGGLIASTgDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFL 466
Cdd:PRK15193 407 TWYGGTQLSE-YYHALAFGLGFNLGDWGAISFDATQAKSTLADQSEHKGQSYRFLYAKSLNQLGTNFQLMGYRYSTSGFY 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 467 SMPEYLQRRtTDGGDAWHEKQS----------YTVTYSQSVPV-LNMSAAL--------SVSRLNYWNAQSNNnymlSLN 527
Cdd:PRK15193 486 TLSDTMYKH-MDGYEFDDGDDEdkstpmwsdyYNLFYTKRGKLqVNISQQLgeygsfylSGSQQTYWHTDQKD----RLL 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 528 KVFSLGDLQGLSASVSFARNQYTGGGSQNQVYA-TISIP---W----GDSRQ-----VSYSVQKDNRGGLQQTVNYSD-- 592
Cdd:PRK15193 561 QFGYNTQIKDISLGVSYNYSKSRGQPDADQVFAlNFSLPlnlWlprsNDTRKkhnayATSSTSIDNEGHVTQNAGLTGtl 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 593 FHNPDTTWNISAGHNRYDTGSNSSfsgsvqSRLPWGQAAADATL-----QPGQYRSLGLSWYGSVTATAHGAAFSQSMAg 667
Cdd:PRK15193 641 LDDNNLSYSVQQGYNNEGKGASGS------ASLDYKGAFGDANVgynysDNGSQQQLNYGLSGGLVAHSQGITLSQPLG- 713
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 668 nEPRMMIDTGDVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQ 746
Cdd:PRK15193 714 -ETNVLIAAPGAENVRVANSTGLkTDWRGYAVVPYATSYRENRIALDAASLKDNVDLENAVVNVVPTKGALVLAEFNAHV 792
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 16766330 747 GEQVLghIRLADGASP-PFGAlVVSWKTGRTAGMVGDGGLAYLTGLSGEDrrTLNVSW 803
Cdd:PRK15193 793 GARAL--MTLSHQGIPlPFGA-TVTLDDQHNSGIVDDDGSVYLSGLPAQG--VLHVRW 845
|
|
| PRK15223 |
PRK15223 |
fimbrial biogenesis outer membrane usher protein; |
6-810 |
3.78e-96 |
|
fimbrial biogenesis outer membrane usher protein;
Pssm-ID: 185145 [Multi-domain] Cd Length: 836 Bit Score: 318.88 E-value: 3.78e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 6 LAILITLTFSVLKSQATEFNASLLDSGnLSNVDLTAFSReGYVAPGNYILDIWLNDQPVREQYPVRVVPVAGLDAAVI-- 83
Cdd:PRK15223 8 LLLFIAGVVHCANAHTYTFDASMLGDA-AKGVDMSLFNQ-GVQQPGTYRVDVMVNGKRVDTRDVVFKLEKDGQGTPFLap 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 84 CVTTDMVAMLGLKDKIIHGLKPVTGIPDgQCLELRS-ADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVTAG 162
Cdd:PRK15223 86 CLTVSQLSRYGVKTEDYPQLWKAAKTPD-ECADLTAiPQAKAVLDINNQQLQLSIPQLALRPEFKGIAPEDLWDDGIPAF 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 163 LLDYSLMVNR--YMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFylpqTYLFRALPALRSKLTLG 240
Cdd:PRK15223 165 LMNYSARTTQtdYKMDMERRDNSSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAY----TYAERGLYSLKSRLTLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 241 QTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLS-QNISGNL 319
Cdd:PRK15223 241 QKTSQGEIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPFALRDLSvTDSSGDL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 320 DVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRplyggTHNNSTVSPDFLLGEAT--WGAFNNTSLYGGLIASTg 397
Cdd:PRK15223 321 HVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGR-----YRSSDSATDKAQIAQATlmYGLPWNLTAYGGIQSAT- 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 398 DYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRTT 477
Cdd:PRK15223 395 HYQAASLGLGGSLGRWGSLSVDGSDTHSQRQGEAVQQGASWRLRYSNQLTATGTNFFLTRWQYASQGYNTLSDVLDSYRH 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 478 DGG--DAWHE----KQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNN-YMLSLNKvfslgDLQGLSASVSFARNQ-- 548
Cdd:PRK15223 475 DGNrlWSWREnlqpSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDsYGLSWGT-----SIGGGSLSLNWNQNRtl 549
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 549 -YTGGGSQNQVYAT-ISIP----WGDSRQVSYSVQKDNRGGLQQT--VNYSDFHNpDTTWNIsagHNRYDTGSNSSFSGS 620
Cdd:PRK15223 550 wRNGAHRKENITSLwFSMPlsrwTGNNVSASWQMTSPSHGGQTQQvgVNGEAFSQ-QLDWEV---RQSYRADAPPGGGNN 625
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 621 VQSRLPW----GQAAADATLQPGQyRSLGLSWYGSVTATAHGAAFSQSMAGNEPrmMIDTGDVAGVPVNGNSGV-TNRFG 695
Cdd:PRK15223 626 SALHLAWngayGLLGGDYSYSRAM-RQMGVNIAGGIVIHHHGVTLGQPLQGSVA--LVEAPGASGVPVGGWPGVkTDFRG 702
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 696 VGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSWKTGR 775
Cdd:PRK15223 703 DTTVGNLNVYQENTVSLDPSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQDG 782
|
810 820 830
....*....|....*....|....*....|....*
gi 16766330 776 TAGMVGDGGLAYLTGLSgeDRRTLNVSWdGRVQCR 810
Cdd:PRK15223 783 SAALVDTDSQVYLTGLA--DKGELTVKW-GAQQCR 814
|
|
| PRK15198 |
PRK15198 |
outer membrane usher protein FimD; |
6-815 |
1.16e-93 |
|
outer membrane usher protein FimD;
Pssm-ID: 185120 [Multi-domain] Cd Length: 860 Bit Score: 313.00 E-value: 1.16e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 6 LAILITLtFSVLKSQATEFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLND-----QPVR-EQYPVRVVPVAGld 79
Cdd:PRK15198 13 LSSLAIL-PPFLSYAESYFNPAFLSEDTASVADLSRFERGNHQPPGVYRVDIWRNDefigtQDIRfESTTVNTGDKSG-- 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 80 AAVICVTTDMVAMLGLKdkiIHGLKPVTGIPDGQCLELRSA--DSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSD 157
Cdd:PRK15198 90 GLMPCFTQELLERLGVN---SSAFPELAQQQDNKCINLLKAipGAEIAFDFASMRLNISLPQIALLNSARGYIPPEEWDE 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 158 GVTAGLLDYSLMVNRympqqGETSTSYSLYGTAGFNLGAWRLRSDYQYsRFDSGQGASQSDFYLPQTYLFRALPALRSKL 237
Cdd:PRK15198 167 GIPAALLNYSFTGNR-----GNDNDSYFLSLLSGLNYGPWRLRNNGAW-NYFRGNGYHSEQWNNIGTWVQRAIIPLKSEL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 238 TLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLS-QNIS 316
Cdd:PRK15198 241 VMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFAITDLNpTSSS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 317 GNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGgthNNSTVSPDFLLGEATWGAFNNTSLYGGLIAST 396
Cdd:PRK15198 321 GDLDVTVDEKDGNQQRYTVPYSTVPLLQREGRVKYDLVAGDFRSG---NSQQSSPFFFQGTAIGGLPQGFTAYGGTQLAA 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 397 gDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFL--------SM 468
Cdd:PRK15198 398 -RYTAVLLGAGRNLGDWGAVSVDVTHARSQLADDSRHEGQSLRFLYAKSLNTFGTNFQLLGYRYSTQGFYtlddvayrSM 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 469 PEYLQRRTTDGGDA------------WHEKQSYTVTYSQSVPVLNmSAALSVSRLNYWN-AQSNNNYMLSLNkvfslGDL 535
Cdd:PRK15198 477 EGYEYDYDSDGEHRdvpiiqsyhnlrFSKKGRFQLNISQSLGDYG-SLYISGSHQKYWNtSDSNTWYQLGYA-----SGW 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 536 QGLSASVSFARNQYTG-GGSQNQVYATISIPWG-------------DSRQVSYSVQKDNRG--GLQQTVNYSDFHNPDTT 599
Cdd:PRK15198 551 QGISYSLSWSWNESVGiPGNDRIVGFNVSVPFSvltkrrytrdnalDRAYATFNANRNSNGdnSWQTGVGGTLLEGRNLS 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 600 WNISAGHNrydtgSNSSFSGSVQSRlpWgqAAADATLQPGQYRSL---GLSWY--GSVTATAHGAAFSQSMAgnEPRMMI 674
Cdd:PRK15198 631 YSVTQGDT-----SNNGYSGSASAN--W--QATYGTLGVGYNYDRdqhDVNWQlsGGVVGHEDGITFSQPLG--DTNVLI 699
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 675 DTGDVAGVPVNGNSGV-TNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLgh 753
Cdd:PRK15198 700 KAPGAGGVRIENQTGVkTDWRGYAVMPYATVYRYNRVALDTNTMGNSTDVENNVSSVVPTQGALVRANFDTRIGVRAL-- 777
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 16766330 754 IRLADGASP-PFGALVVSWKTGRTAgMVGDGGLAYLTG--LSGEdrrtLNVSW-DG-RVQCR--LTLPE 815
Cdd:PRK15198 778 ITVTQGGKPvPFGALVRETSSGITS-MVGDDGQIYLSGlpLSGE----LLIQWgDGaNSRCIahYVLPE 841
|
|
| PRK15248 |
PRK15248 |
fimbrial outer membrane usher protein; |
6-811 |
5.33e-88 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185160 [Multi-domain] Cd Length: 853 Bit Score: 297.52 E-value: 5.33e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 6 LAILITLTFSvlkSQATE----FNASLLdSGNLSNVDLTAFSREGYVApGNYILDIWLNDQPVREQYPVRVVPVAGLDAA 81
Cdd:PRK15248 12 LALLIAIVCS---GSAQGeeyyFDPALL-QGATYGQNIARFNEQQTPS-GDYLADVYVNGTLVTSSTNIRFNAVKEGQQT 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 82 VICVTTDMVAMLGLKDkiihglkPVTGIPDGQCLELR--SADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGV 159
Cdd:PRK15248 87 EPCLPLSVMKAAQIKS-------LPATDAATECRPLRewVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGA 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 160 TAGLLDYSlmVNRYmpqQGETSTSYSLYG------TAGFNLGAWRLRSDYQYSRFDSGQGASQSDFYLPQTYLFRALPAL 233
Cdd:PRK15248 160 LALFLRHN--TNWT---HTENTDSHYRYQylwsglNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASI 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 234 RSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDL-S 312
Cdd:PRK15248 235 NSILSLGDSYTDSSLFGSLSFNGIKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLyN 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 313 QNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRplyggTHNNSTVSPDFLLGEATWGAFNN-TSLYGG 391
Cdd:PRK15248 315 TRYQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGR-----VRQYYDIENRFFEGTFQHGVNNTiTLNLGS 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 392 LIAStgDYQSAALGiGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDkTGSTLAFVGYRFSDRHFLSMPEY 471
Cdd:PRK15248 390 RIAQ--RYQAWLAG-GVWATGMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFT-TGTNLVLAAYRYSTNGFRDLQDV 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 472 LQ-RRTTDGG-----DAWHEKQSYTVTYSQSVPVLNMsAALSVSRLNYWNAQS--------------NNNYMLSLNKVFS 531
Cdd:PRK15248 466 LGvRREAKTGidyysDTLHQRNRLSATVSQPLGRLGT-LNLSASTADYYNNQSritqlqmgysnqwrNISYGVNIARQRT 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 532 LGDLQGLSASVSF-----ARNQYTgggsQNQVYATISIP--WGDSR-QVSYSVQK--DNRGGlQQTVNYSDFHNPDTTWN 601
Cdd:PRK15248 545 TWDYDRFYHGVNEpldvsSRQKYT----ETTMSFNVSIPldWGENRtSVAMNYNQssQSRSS-TVSMTGSSGENSDLSWS 619
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 602 ISAGHNRY-----DTGSNSSFSGSVQSRLPWGQAAADATlQPGQYRSLGLSWYGSVTATAHGAAF----SQSMAgneprm 672
Cdd:PRK15248 620 VYGGYERYrnsnsDSSAPTTFGGNLQQNTRFGALRANYD-QGDNYRQEGLGASGTLVLHPGGLTAgpytSDTFA------ 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 673 MIDTGDVAGVPV-NGNSGVTNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVL 751
Cdd:PRK15248 693 LIHADGAQGAIVqNGQGAVVDRFGYAILPSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVL 772
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16766330 752 GHIRLADGASPPFGALVVSWKtGRTAGMVGDGGLAYltGLSGEDRRTLNVSW--DGRVQCRL 811
Cdd:PRK15248 773 ISVKMPDGGIPPMGADVFNGE-GTNIGMVGQSGQIY--ARIAHPSGSLLVRWgtGANQRCRV 831
|
|
| PRK15207 |
PRK15207 |
outer membrane usher protein LpfC; |
3-815 |
1.03e-87 |
|
outer membrane usher protein LpfC;
Pssm-ID: 185129 [Multi-domain] Cd Length: 842 Bit Score: 296.44 E-value: 1.03e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 3 ITRLAILITLTFSvlkSQATEFNASLLD--SGNLSNVDLTAF-SREGYVAPGNYILDIWLNDQPVREQY-----PVRVVP 74
Cdd:PRK15207 17 FSLLALTIASTLP---AYAGKFNPKFLEdvQGIDQHVDLSMYeSPVGQQLPGKYRVSVFVNEEKMESRTlefkaATEAQR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 75 VAGLDAAVICVTTDMVAMLGLKDKIIHGLKPvtgIPDGQCLELRSADSQV--RYSAENQRLTFIIPQAWMRYQDPDWVPP 152
Cdd:PRK15207 94 KAMGESLVPCLSRVQLEEMGVRVDSFPALKM---APPEACVAFDEIIPQAtsHFDFNTQTLHLSFPQAAMMQTARGTVPE 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 153 SRWSDGVTAGLLDYSLMVN--RYMPQQGE---TSTSYSLYGTAGFNLGAWRLRSdyqYSRFDSGQGASQSDFYlpQTYLF 227
Cdd:PRK15207 171 SRWDEGIPALLLDYSFSGSngSYDGTGSSssyTSDSYYLNLRSGLNLGAWRLRN---YSTWNRTDGKNQWDNI--GTSLS 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 228 RALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFE 307
Cdd:PRK15207 246 RAIIPLKSQLTLGDTATAGDIFDSVQMRGALLASDEEMLPDSQRGFAPVVRGIAKSNAEVSIEQNGYVIYRTFVQPGAFE 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 308 LPDL-SQNISGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGgthNNSTVSPDFLLGEATWGAFNNT 386
Cdd:PRK15207 326 INDLyPTSNSGDLTVIIKEADGSEQRFIQPFSSVAIFQREGHLKYSLAAGEYRAG---NYDSAKPKFGQLDAMYGLPWGM 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 387 SLYGGLIASTgDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDkTGSTLAFVGYRFSDRHFL 466
Cdd:PRK15207 403 TAYGGALLSA-DYNALALGLGKNFGYIGAISIDVTQAKSQLRNNEKSEGQSYRFLYSKSFE-SGTDFRLLGYKYSTSGYY 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 467 SMPEYLQRRTTDGGD--AWHEKQSYTVTYSQSVPVLNmSAALSVSRLNYWNAQSNNNymlSLNKVFSlGDLQGLSASVSF 544
Cdd:PRK15207 481 TFQEATDVRSDADSDyrRYHKRSQIQGNITQQLGAYG-SVYFNMTQQDYWNDDGKQN---SLSAGYN-GRIGRVNYSVAY 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 545 ARNQYTGGGSQNQVYA-TISIPWGDSRQvSYSVQKDNRGGLQQTVNYSD--FHNPDTTWNISAGHNRYDTGSnssfSGSV 621
Cdd:PRK15207 556 TWTKSPEWDESDRLWSfSMSIPLGRAWS-NYRMTTDQNGRTNQQLGVSGtlLEDRNLSYSVQEGYTSNGVGN----SGSV 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 622 QSRLPWGQAAADATLQPGQ-YRSLGLSWYGSVTATAHGAAFSQSMAgnEPRMMIDTGDVAGVPVNGNSGV-TNRFGVGVV 699
Cdd:PRK15207 631 NLGYQGGSGNISVGYNYSKdNQQVNYGVRGGVIVHSEGITLSQPLG--ESMAIISAPGARGAHVVNNGGVeVDWMGNAVV 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 700 SAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSW-KTGRTAG 778
Cdd:PRK15207 709 PYLTPYRETEVSLRSDSLGQNVDLQEAFQKVVPTRGAIVRARFDTRVGYRVLMSLKQANGNAVPFGATATLIdTTKEASS 788
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 16766330 779 MVGDGGLAYLTGLSGEDRrtLNVSW--DGRVQCRL--TLPE 815
Cdd:PRK15207 789 IVGEEGQLYISGMPEEGE--LQVSWgnDQAQQCRVpfRLPE 827
|
|
| PRK15298 |
PRK15298 |
fimbrial outer membrane usher protein; |
3-810 |
6.33e-86 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185198 [Multi-domain] Cd Length: 848 Bit Score: 291.66 E-value: 6.33e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 3 ITRLAILITL--TFSVLKSQATEFNASLLDS---GNLSNVDLTAFSREGYVAPGNYILDIWLNDQPV-REQYPVRVVPVA 76
Cdd:PRK15298 11 LSRCAVCIALgsTFAHVAWARDYFNPAFIENhgqANRTSVDLSTFDNDKSQLPGTYYVTININKTEIgARNVDFQLATLS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 77 -GLDAAVICVTTDMVAMLGLKDKIIHGLKPVTGIPDgqcLELRSADSQvRYSAENQRLTFIIPQAWMRYQDPDWVPPSRW 155
Cdd:PRK15298 91 dGQQALQGCLRLQELKDNGVKTDLFPTLESEKGCVD---LSVIPGASQ-RFDFQQQALSVSIPQLYIANNARGYVPPEKW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 156 SDGVTAGLLDYSLMVNRYMPQQGETSTSYSLYGT--AGFNLGAWRLRSDYQYSRfDSGQGASQSDFYlpqTYLFRALPAL 233
Cdd:PRK15298 167 QEGITALMLNYSFSGYKEYGSSEDSDDAESKYLAlqPGFNLGPWRFRNYSNWSS-NNGESGSWNSVY---NYLQRDIIAL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 234 RSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQ 313
Cdd:PRK15298 243 KSQFTAGDSNTPSDVFDSVPFRGLQLTSDDQMQPNSQRGYAPTIRGIARSNAQVIVRQNGYIAYQTAVSPGEFEINDMFP 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 314 NIS-GNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSPDFLLGEATWGafnnTSLYGGL 392
Cdd:PRK15298 323 TGSnGDYDVTVKEADGSEQHFIVPYSSLPILQRTGRAKYSVTVGKYRDYNNHTLDDFGQATLLYGLPWG----ITLYGGS 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 393 IASTGDYQSAALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYL 472
Cdd:PRK15298 399 QIAGDKYQSVAFGVGQNMQMLGAISLDGIWSHAKFDDGRKEIGQSWRVRYSKGVVSTGTTFSLAGYRYASENYNSLSEVI 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 473 QRRTTDGGDAWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYW-NAQSNNNYMLSLNKvfSLGDLQgLSASVSFARNQYTG 551
Cdd:PRK15298 479 NPDDDFYDNYGKRHNRFEASVNQQISNTLGSLTLSWVKEDYWhSAQQMESLSASYNN--SWGPVS-YTLSYSYNKNTYQY 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 552 GG------------SQNQVYATIS--IPWG--DSR-QVSY--SVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRYD-- 610
Cdd:PRK15298 556 RSdnddddndddryNQNDRLFTLSlhVPFTvfDSRlYASYmlNTRKHDATVNSTTLSGTALRDRNLNWSLQQSHSTQDgd 635
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 611 -TGSNSSFSGSVQSRLPWGQAAADAtlqpgQYRSLGLSwyGSVTATAHGAAFSQSMAGnePRMMIDTGDVAGVPVNGNSG 689
Cdd:PRK15298 636 sGGVNASYKGTYANLNAGYNQSPDS-----QQVSYGIS--GGILAHENGITLSQPITG--AAILIKAPGASGVSVENQTG 706
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 690 VTNRF-GVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALV 768
Cdd:PRK15298 707 VATDFrGYTVIPNVTPYYRYDISLDSSTFADNVDIPLNNQTVYPTRNAVVRAAYDTHKGYRVLLTLTRSNGEPVPFGATA 786
|
810 820 830 840
....*....|....*....|....*....|....*....|...
gi 16766330 769 -VSWKTGRTAGMVGDGGLAYLTGLSGEDrrTLNVSWdGRVQCR 810
Cdd:PRK15298 787 sVDGQDANLASIVGDKGQVFLSGLPEEG--LLLVNW-GSASCR 826
|
|
| PRK15213 |
PRK15213 |
outer membrane usher protein PefC; |
6-811 |
3.20e-84 |
|
outer membrane usher protein PefC;
Pssm-ID: 237926 [Multi-domain] Cd Length: 797 Bit Score: 285.87 E-value: 3.20e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 6 LAILITLtFSVLKSQATEFNASLLDSGnlSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQypvrVVPVAGLDAAVICV 85
Cdd:PRK15213 15 LAIFTHL-GFASAVAGEELNMSFIQGG--GGIPPEVLASNGDYPPGRYLVDVIFNGKKIGKA----ILSITPQEAEALCL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 86 TTDMVAMLGL---KDKIIHGLKPvtgipDGQCLEL-RSADSQVRYSAENQRLTFIIPQAWMRyqdpDWVPPSRWSDGVTA 161
Cdd:PRK15213 88 SPEWLKKAGIpvsLEYYRSGYDA-----ARQCYVLsKAPSVQVDFDYSTQSLTLSIPQAGLV----KKPEPVEWDYGVPA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 162 GLLDYSLMVNRYMPQQGETSTSYSLYgtagFNLGAWRLRSDYQYSRFDSGQGASQSDFYLpqtyLFRALPALRSKLTLGQ 241
Cdd:PRK15213 159 FRLNYSANASKTSRQNTSAYGNADLK----ANLGRWVLSSRASASRGAGGSNEFTTNDFT----LTTAIKSLQGDLLVGK 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 242 TYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQNISGNLDV 321
Cdd:PRK15213 231 TQTGNSLLGSFGFYGASLRSNNDMLPWENRGYAPVISGIANGPSRVTISQNGYTLYSEVVPAGPFQLDDVPLVGSGDLTV 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 322 SVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNSTVSpDFLLGEATWGaFNNTSLYGGLIAStGDYQS 401
Cdd:PRK15213 311 TVEEEDGHKTTQVFPVAVLPGLLRPGEHEYNVAAGLKDDNYDLKKPENG-LFFAGSYGYG-FDGLTLNAAGILN-QNYQG 387
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 402 AALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTgSTLAFVGYRFSDRHFLSMPEYlqrrttDGGD 481
Cdd:PRK15213 388 GGVGVVQGLGYFGAVSASGNLSQAKYQNGDNKSGNSVSLKYAKSLSDT-NNLQLLSYRYQSEGYVDFADF------YPTD 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 482 AWHE---KQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNN-NYMLSLNKVFslgDLQGLSASVSFARNQYTGGGSQNq 557
Cdd:PRK15213 461 LYTRsntKRRYEDIFSQGLSQSLFFLSLSGWQEDYWPSSGKEtGATVSLSTTI---KGVSVNLNGSYSKRNSLGENDYS- 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 558 VYATISIPW--GDSRQVSY-SVQKDNRGGLQQTVNYSDFHNPDTTWNISAGHNRyDTGSNSSFSGSVQsrLPWGQAAADA 634
Cdd:PRK15213 537 ASLSISIPFtlFDKRHYSStSVSYSRSGGTGFNSGVSGSLNDRLSYGLNTNRDR-DGGRSSSLNASYG--FDRAQTNGML 613
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 635 TLQPGQYRSLGLSWYGSVTAT-AHGAAFSQSMagNEPRMMIDTGDVAGVPVNGnSGVTNRFGVGVVSAgSSYRRSDISVD 713
Cdd:PRK15213 614 SHQGGGNTSGSVSVSGSVLGTpDAGILFTRVT--GDTVAVVNVKDVPGVKFNG-SGPTDSKGNTVVPL-SSYDLNTVTVN 689
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 714 VAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSwKTGRTAGMVGDGGLAYLTGLSG 793
Cdd:PRK15213 690 AENLPLNTELTTTSQNVVPTDKAVVYREFKALKVLRYILRVKQKDGRFVPGGSWARN-EQGTPLGFVANNGVLLMNLLDA 768
|
810
....*....|....*...
gi 16766330 794 EDRRTLNvswdgrvQCRL 811
Cdd:PRK15213 769 PGDISVG-------QCRF 779
|
|
| PRK15294 |
PRK15294 |
fimbrial outer membrane usher protein; |
30-803 |
8.52e-84 |
|
fimbrial outer membrane usher protein;
Pssm-ID: 185194 [Multi-domain] Cd Length: 845 Bit Score: 285.87 E-value: 8.52e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 30 DSGNLSNVDLTAFSREGYvAPGNYILDIWLNDQPVrEQYPVRVVPVAGLDAAVI---CVTTDMVAMLGLKDKIIHGLKpv 106
Cdd:PRK15294 40 DEPGVENVDLSVFEKGGQ-AEGTYNVDIYINNTSV-ETKNIAFKNKKSADNKLSlqpCLSVEQLKQWGVKTENFPELK-- 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 107 tGIPDGqCLELRS-ADSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVTAGLLDYSLMVNR-YMPQQGETSTSY 184
Cdd:PRK15294 116 -NDPNG-CTDLSLlAGAVAKFNVIGNRLDLAIPQIALIADPREFVPTSEWDEGINAFLLNYSFTGSQdHDIDENRTENSE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 185 SLYGTAGFNLGAWRLRSDYQYSRFDSGQGASQSDFylpqTYLFRALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDER 264
Cdd:PRK15294 194 YANLRPGINIGAWRFRNYSTWNHDSDGQNSWDSAY----TYVSRDIEFLKGQLIAGENNTPADVFDSISFKGVQISSDDD 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 265 MLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDL-SQNISGNLDVSVRESDGSVRTWQVNTASVPFM 343
Cdd:PRK15294 270 MLPDSMKGFAPVIRGVAKSSAQVTVEQNGYTIYKTNVPAGPFAINDLyPTGGSGDLYVTIKESDGSEQHFIVPYASVPVL 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 344 ARQGQVRYKVAAGRPLYGGTHnnsTVSPDFLLGEATWGAFNNTSLYGGLIASTGD--YQSAALGIGQNMGLLGALSADVT 421
Cdd:PRK15294 350 QREGHLKYDLTVGRTRSSDTH---SAQQNFAELTALYGLAGGITAYGGIESTLSNdvYHAALIGTGLNLGDLGALSLDVT 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 422 RSDARLPHGQKQS----GYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQrRTTDGGDAWHEKQSYTVTYSQSv 497
Cdd:PRK15294 427 NSWSKIKAGDVVSdtltGQSWRIRYSKDIQSTGTNFTVAGYRYSTKDYYALEDVLD-TYSDNSHYDHVRNRTDLSLSQD- 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 498 pVLNMSAALSVSRLNYWNAQSNNNYMLSLNKV-----FSLGDLQGLSASVSFARNQYTGGGSQNQVYATISIP---WGDS 569
Cdd:PRK15294 505 -IIYGSISLTLYNEDYWNDTHTTSLGIGYNNTwhnvsYGINYSYTLNADNSQDEDDDTEDSNDQQISINISIPldaFMPS 583
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 570 RQVSYSVQKDNRGGLQQTV--NYSDFHNPDTTWNISAGHNRYDTGSNSSFSGSvqsrlpWGQAAADATlqpGQY------ 641
Cdd:PRK15294 584 TYATYNMNSAKDGDTTHTVglNGTALAQKNLSWSVQEGYSSQEKATSGNVSAT------YNGTYADIN---GGYsydnhm 654
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 642 RSLGLSWYGSVTATAHGAAFSQSMagNEPRMMIDTGDVAGVPVNGNSGVTNRF-GVGVVSAGSSYRRSDISVDVAALPED 720
Cdd:PRK15294 655 RRLNYGVQGGVLLHRNGLTLSQPM--DDTIILVKAPGAAGVPVNNETGVDTDFrGYAVVPYASPYHRNEVSLDTTGIRKN 732
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 721 VDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSW-KTGRTAGMVGDGGLAYLTGLSGEDRrtL 799
Cdd:PRK15294 733 IELIDTSKTLVPTRGAVVRAEYKTNIGYKALMVLTRINNLPVPFGATVSSLtKPDNHSSFVGDAGQAWLTGLEKQGR--L 810
|
....
gi 16766330 800 NVSW 803
Cdd:PRK15294 811 LVKW 814
|
|
| PRK15217 |
PRK15217 |
fimbrial outer membrane usher protein; Provisional |
1-788 |
6.61e-83 |
|
fimbrial outer membrane usher protein; Provisional
Pssm-ID: 185139 [Multi-domain] Cd Length: 826 Bit Score: 282.83 E-value: 6.61e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 1 MKITRLAILITLTFSVLKSQATE--FNASLLdSGNLSNVDLTAFSREGYVA-PGNYILDIWLNDQpVREQYPVRVVPvag 77
Cdd:PRK15217 2 LRMTPLASAIVALLLGIEAYAAEetFDTHFM-IGGMKGQKVSNYRLDDNQPlPGQYEIDIYVNKQ-WRGKYEIIVKD--- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 78 lDAAVICVTTDMVAMLGLKdkiIHGLKPVTgipdgQCLELRSA--DSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRW 155
Cdd:PRK15217 77 -NPQETCLSRELIKRLGIK---SDNFATEK-----QCITLKQLvqGGSYTWDIGVFRLDLSVPQAYVEELEAGYVPPENW 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 156 SDGVTAGLLDYSLMVNR-YMPQQGETSTSYSLYgTAGFNLGAWRLRSDYQYSRFDSGQGASQSDfylpQTYLFRALPALR 234
Cdd:PRK15217 148 DRGINAFYTSYYASQYYsDYKASGNSKSTYVRF-NSGLNLLGWQLHSDASFSKTDNNPGEWKSN----TLYLERGFAQLL 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 235 SKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTVSQNGRILYQTRVSPGPFELPDLSQN 314
Cdd:PRK15217 223 GTLRVGDMYTSSDIFDSVRFSGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVTIEQNGFVVYQKEVPPGPFAIADLQLA 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 315 ISG-NLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRPLYGGTHNNStvspDFLLGEATWGAFNNTSLYGGLI 393
Cdd:PRK15217 303 GGGaDLDVSVKEADGSVTTYLVPYASVPNMLQPGVSKYDFAAGRSHIEGASKQS----DFVQAGYQYGFNNLLTLYGGTM 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 394 ASTgDYQSAALGIGQNMgLLGALSADVTRSDARLPHGQKQSGYSYRINYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYL- 472
Cdd:PRK15217 379 LAN-NYYAFTLGTGWNT-RIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKYLSQTSTRFGLAAWRYSSRDYRTFNDHVw 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 473 -------QRRTTDGGD-------AWHEKQSYTVTYSQSVPVLNMSAALSVSRLNYWNAQSNNNymlslnkvfslgDLQgL 538
Cdd:PRK15217 457 annkdnyRRDENDVYDiadyyqnDFGRKNSFSANISQSLPEGWGSVSLSALWRDYWGRSGSSK------------DYQ-L 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 539 SASVSFARNQYTGGGSQN-----------QVYATISIPWGDS-----RQ--VSYSVQKDNRG------GLQQTVNYSDFH 594
Cdd:PRK15217 524 SYSNNWQRISYTLSASQTydenhheekrfNIFISIPFDWGDDvttprRQiyLSNSTTFDDQGfasnntGLSGTAGSRDQF 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 595 NpdttWNISAGHNRydTGSNSSFSGSVQSRLPWGQAAADATlQPGQYRSLGLSWYGSVTATAHGAAFSQSMagNEPRMMI 674
Cdd:PRK15217 604 N----YGVNLSHQR--QGNETTAGANLTWNAPVATVNGSYS-QSSNYRQAGGSISGGLVAWSGGVNLANRL--SDTFAIM 674
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 675 DTGDVAGVPVNGNS-GVTNRFGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGH 753
Cdd:PRK15217 675 NAPGLEGAYVNGQKyRTTNRKGVVVYDGLTPYRENHLMLDVSQSDSETELRGNRKIAAPYRGAVVLVNFDTDQRKPWFIK 754
|
810 820 830
....*....|....*....|....*....|....*
gi 16766330 754 IRLADGASPPFGALVVSwKTGRTAGMVGDGGLAYL 788
Cdd:PRK15217 755 ALRADGQPLTFGYEVND-IHGHNIGVVGQGSQLFI 788
|
|
| PRK15235 |
PRK15235 |
outer membrane fimbrial usher protein SefC; Provisional |
50-806 |
2.57e-65 |
|
outer membrane fimbrial usher protein SefC; Provisional
Pssm-ID: 185150 [Multi-domain] Cd Length: 814 Bit Score: 233.85 E-value: 2.57e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 50 PGNYILDIWLNDQpVREQYPVRVVPVAglDAAVICVTTDMVAMLGLKDKIIHGLKpvtgIPDGQCLELRSADSQVRYSAE 129
Cdd:PRK15235 49 PGNYVVDVYLNNQ-LKETTELYFKSMT--QTLEPCLTKEKLIKYGIAIQELHGLQ----FDNEQCVLLEHSPLKYTYNAA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 130 NQRLTFIIPQAWMRYQDPDWVPPSRWSDGVTAGLLDYSLmvnRYMPQQGETSTSYSLYGTAGFNLGAWRLRSDYQYSRFd 209
Cdd:PRK15235 122 NQSLLLNAPSKILSPIDSEIADENIWDDGINAFLLNYRA---NYLHSKVGGEDSYFGQIQPGFNFGPWRLRNLSSWQNL- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 210 sgqgASQSDFYLPQTYLFRALPALRSKLTLGQTYLSSAIFDSFRFAGLTLASDERMLPPSLQGYAPKISGIANSNAQVTV 289
Cdd:PRK15235 198 ----SSEKKFESAYIYAERGLKKIKSKLTVGDKYTSADLFDSVPFRGFSLNKDESMIPFSQRTYYPTIRGIAKTNATVEV 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 290 SQNGRILYQTRVSPGPFE-----LPDLSQNIsGNLDVSVRESDGSVRTWQVNTASVPFMARQGQVRYKVAAGRplYGGTh 364
Cdd:PRK15235 274 RQNGYLIYSTSVPPGQFEigreqIADLGVGV-GVLDVSIYEKNGQVQNYTVPYSTPVLSLPDGYSKYSVTIGR--YREV- 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 365 NNSTVSPDFLLGEATWGAFNNTSLYGGlIASTGDYQSAALGIGQNMGLLGALSAD----VTRSDArlphgQKQSGYSYRI 440
Cdd:PRK15235 350 NNDYIDPVFFEGTYIYGLPYGFTLFGG-VQWANIYNSYAIGASKDIGEYGALSFDwktsVSKTDT-----SNENGHAYGI 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 441 NYAKTFDKTGSTLAFVGYRFSDRHFLSMPEYLQRRTTDGGDAWHEKQSYTVTYSQSVPVLNmSAALSVSRLNYWNAQSNN 520
Cdd:PRK15235 424 RYNKNIAQTNTEVSLASHYYYSKNYRTFSEAIHSSEHDEFYDKNKKSTTSMLLSQALGSLG-SVNLSYNYDKYWKHEGKK 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 521 NYMLSLNKvfslgDLQGLSASVSFARNQYTGGGSQNQVYA-TISIPWGDSRQVSYSVQKDNRGGLQQTVNYS-----DFH 594
Cdd:PRK15235 503 SIIASYGK-----NLNGVSLSLSYTKSTSKISEENEDLFSfLLSVPLQKLTNHEMYATYQNSSSSKHDMNHDlgitgVAF 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 595 NPDTTWNISA-----GHNRYDTGSNSSFSGSvqsrlpWGQAAADATLQPGQyRSLGLSWYGSVTATAHGAAFSQSMAgnE 669
Cdd:PRK15235 578 DSQLTWQARGqiedkSKNQKATFLNASWRGT------YGEIGANYSHNEIN-RDIGMNVSGGVIAHSSGITFGQSIS--D 648
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 670 PRMMIDTGDVAGVPVNGNSGVTNRF-GVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGE 748
Cdd:PRK15235 649 TAALVEAKGVSGAKVLGLPGVRTDFrGYTISSYLTPYMNNFISIDPTTLPINTDIRQTDIQVVPTEGAIVKAVYKTSVGT 728
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 16766330 749 QVLGHIRLADGaSPPFGALVVSWKTG----RTAGMVGDGGLAYLTGLSGEDRrtLNVSWDGR 806
Cdd:PRK15235 729 NALIRITRTNG-KPLALGTVLSLKNNdgviQSTSIVGEDGQAYVSGLSGVQK--LIASWGNK 787
|
|
| PapC_N |
pfam13954 |
PapC N-terminal domain; The PapC N-terminal domain is a structural domain found at the ... |
23-168 |
9.72e-44 |
|
PapC N-terminal domain; The PapC N-terminal domain is a structural domain found at the N-terminus of the E. coli PapC protein. Pili are assembled using the chaperone usher system. In E.coli this is composed of the chaperone PapD and the usher PapC. This domain represents the N-terminal domain from PapC and its homologs. This domain is involved in substrate binding.
Pssm-ID: 433603 [Multi-domain] Cd Length: 146 Bit Score: 154.70 E-value: 9.72e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 23 EFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPVREQyPVRVVPVAGLDAAVICVTTDMVAMLGLKdkiIHG 102
Cdd:pfam13954 1 EFNPDFLDGSGAAGVDLSRFSRGNYVLPGTYRVDVYVNGRWIGRQ-DVRFVADPGDGGLEPCLTPELLEQLGVK---TDK 76
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 16766330 103 LKPVTGIPDGQCLELRSA--DSQVRYSAENQRLTFIIPQAWMRYQDPDWVPPSRWSDGVTAGLLDYSL 168
Cdd:pfam13954 77 LPALADAQLGACVDLAALipGASARFDFAQQRLDLSIPQAYLRRSARGYVPPSLWDDGIPAALLNYNA 144
|
|
| PRK15304 |
PRK15304 |
putative fimbrial outer membrane usher protein; Provisional |
9-816 |
5.46e-43 |
|
putative fimbrial outer membrane usher protein; Provisional
Pssm-ID: 237937 [Multi-domain] Cd Length: 801 Bit Score: 168.01 E-value: 5.46e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 9 LITLTFSVLKSQATeFNASLLDSGNLSNVDLTAFSREGYVAPGNYILDIWLNDQPvREQYPVRVVpvaglDAAVICVTTD 88
Cdd:PRK15304 19 LPTTTFTALAAEVT-FDTDILKSRGLDPNIAHYFSRAPRFLPGSHSVMVKINGKK-RGSLAARFD-----EEGQLCVDDD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 89 MVAMLGLKdkiihglkPVTGIPDGQCLELRSADSQ--VRYSAENQRLTFIIPQAWMryqDPDWVPPSRWSDGVTAGLLDY 166
Cdd:PRK15304 92 FLQAAGLV--------PLPISAKETCHDLQEDYPSatITPLPNQESLELVVPPEAL---DNDLLRLNNVIHGGTAALLNY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 167 SLMVNRYmpqqgETSTSYSLYGTA----GFNLGAWRLRSDYQYSRfDSGQGASQSDFylpqTYLFRALPALRSKLTLGQT 242
Cdd:PRK15304 161 SLFSSRY-----EYSGGDSDYSQAsleaGFNFADWTLRSRQFLTD-TDGEFSTDSLY----TYAQHTFTDQKTLMQVGQI 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 243 YLSSAIFDSFRFAGLTLASDERMLPPSlQGYapKISGIANSN-AQVTVSQNGRILYQTRVSPGPFELPDLsQNISGN--L 319
Cdd:PRK15304 231 NVNNSLFSGASIYGVQLMPENALQQDG-SGV--TVTGIARTSqARVEIRQSGQLIYSTLVPAGAFTLDDV-PVINGNtdL 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 320 DVSVRESDGSVRTWQVNTASVpfmaRQGQVR----YKVAAGRplyggTHNNSTVSPDFLLGEAT--WGAFNNTSLYGGLI 393
Cdd:PRK15304 307 NVTVVETDGSTSHFTVPASSF----NLNELSrpqgLTMAIGR-----VRDTDSDYSQPWVYNASdgWRLTPWMNLLAGGV 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 394 ASTgDYQsaALGIGQNMGLLGALSADVTRSDARLPHGQKQSGYSYRIN--YAKTFdktGSTLAFVGYRFSDrHFLSMPEY 471
Cdd:PRK15304 378 LAE-NYQ--AAGARLDWVPLPKWTVSASMLGSQDSFGDSLQGHKTELDagYSLPG---SLGLSVSTARYSD-GYRELTEA 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 472 LQRrttdggDAWHEKQSYTVTYSQSVPVLNmSAALSVSRLNYWNAQSNNNY-MLSLNKVFSLgdlqglsASVSFARNQYT 550
Cdd:PRK15304 451 LDD------DYYSYKSSYSANVNWSHSLLG-TFSLGYYYNQATDGDNDSRYiNASWGKTFKY-------ASVSVNWQHAV 516
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 551 GGGSQNQ-----VYATISIPWGDSRQV-SYSVQKDNRG--GLQQTVNYSDfhnpDTTWNISAghNRYDTGSNSSFSGSVQ 622
Cdd:PRK15304 517 SQDDENSndddmFYVNISIPLGRSRSInAYMRNQGDKTsyGLRNMGSLSD----NTSYYVSA--DRDHDESENSFNGSLN 590
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 623 SRLPWGQAAADATLQPGQYRSLGLSWYGSVTATAHGAAFSqsmagnePRMMIDT-------GDVAGVPVNGNSGV--TNR 693
Cdd:PRK15304 591 SNLHYTQLSVGAGTDGDDNRNYNATLSGGIAAHDQGVTFS-------PYTIKDTfaiarldEPVAGVEIATPQGPvwTDF 663
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 16766330 694 FGVGVVSAGSSYRRSDISVDVAALPEDVDVSSSVISQVLTEGAVGYRKIDANQGEQVLGHIRLADGASPPFGALVVSWKt 773
Cdd:PRK15304 664 WGQAVIPGLTEWRKSRVEVNTNTLPKNMDLANGTKMIKAAHGAVSKVDFSVLNQRRVMLNVKRADGSPLPKGVSIVDEK- 742
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 16766330 774 GRTAGMVGDGGLAYLTGLSgEDRRTLNVSWDGRVQCRL--TLPET 816
Cdd:PRK15304 743 GNYLTSAVDDGRVFLNDID-DIPALYAKDDDMNRLCRIhyTLPED 786
|
|
| PapC_C |
pfam13953 |
PapC C-terminal domain; The PapC C-terminal domain is a structural domain found at the ... |
753-815 |
1.45e-10 |
|
PapC C-terminal domain; The PapC C-terminal domain is a structural domain found at the C-terminus of the E. coli PapC protein. Pili are assembled using the chaperone usher system. In E.coli this is composed of the chaperone PapD and the usher PapC. This domain represents the C-terminal domain from PapC and its homologs. This domain has a beta-sandwich structure similar to the plug domain of PapC.
Pssm-ID: 464055 [Multi-domain] Cd Length: 66 Bit Score: 57.61 E-value: 1.45e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 16766330 753 HIRLADGASPPFGALVVSWKTGRTaGMVGDGGLAYLTGLsgEDRRTLNVSWDGR--VQCRL--TLPE 815
Cdd:pfam13953 3 TLTDADGKPLPFGATVTDEGGGQS-GIVGQDGQVYLRGL--PDQGRLRVKWGDGagQQCRAsyTLPE 66
|
|
| |
