NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|17511165|ref|NP_492929|]
View 

Glycosyltransferase family 92 protein [Caenorhabditis elegans]

Protein Classification

glycosyltransferase family 92 protein( domain architecture ID 10483974)

glycosyltransferase family 92 protein catalyzes the transfer of saccharide moieties from a donor to an acceptor to form glycosidic bonds

CAZY:  GT92
EC:  2.4.-.-
Gene Ontology:  GO:0016757
SCOP:  3000077

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Glyco_transf_92 pfam01697
Glycosyltransferase family 92; Members of this family act as galactosyltransferases, belonging ...
156-400 4.04e-50

Glycosyltransferase family 92; Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily.


:

Pssm-ID: 426386  Cd Length: 250  Bit Score: 171.00  E-value: 4.04e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   156 RGLTVCLQIVYY-YSQWQNVILYIEAWRAQGATRFIVFYHSSTEDTKKVLDYYEKLGLIELRPWPNIGELSSNISpmypk 234
Cdd:pfam01697   1 KDLVVCVAPLYFnYEQWQNLLEWIEYYKLQGATHFYIYLHSITEYDFKVLKEYEKTGYVELVPWPDIKFQPVAEP----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   235 vDESVFIIATHMALQICSLEIK--TSLGIVADFDEVMVPDK-GTVLDHAMKEMTGKDIGALLFENTHVALTPNIYTNNYS 311
Cdd:pfam01697  76 -NKRVELRNQAAAQNDCLLRYKeaAKWIAFVDLDERLVPTKsPTTLEEFLREFADEPVISLQFRNRWVLKYNSIPAKYFS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   312 G---VRSLTFTDIFAPPKYIFNTSLIDICETHSPGKFLHKSTYTKM--ANGTVLHFRFNVKQIraKIVRKSYRFFPNDTA 386
Cdd:pfam01697 155 LkqlIGNMIFLKYRETGKCIVRPEKVNSTWIHFPRKFYPGYKLRKVdiSEGVIRHYRNPVWKD--DVFKKPFSKFPESET 232
                         250
                  ....*....|....*...
gi 17511165   387 G----HIRNMHDTMNKIF 400
Cdd:pfam01697 233 VigdfTITPIPEDLRRML 250
 
Name Accession Description Interval E-value
Glyco_transf_92 pfam01697
Glycosyltransferase family 92; Members of this family act as galactosyltransferases, belonging ...
156-400 4.04e-50

Glycosyltransferase family 92; Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily.


Pssm-ID: 426386  Cd Length: 250  Bit Score: 171.00  E-value: 4.04e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   156 RGLTVCLQIVYY-YSQWQNVILYIEAWRAQGATRFIVFYHSSTEDTKKVLDYYEKLGLIELRPWPNIGELSSNISpmypk 234
Cdd:pfam01697   1 KDLVVCVAPLYFnYEQWQNLLEWIEYYKLQGATHFYIYLHSITEYDFKVLKEYEKTGYVELVPWPDIKFQPVAEP----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   235 vDESVFIIATHMALQICSLEIK--TSLGIVADFDEVMVPDK-GTVLDHAMKEMTGKDIGALLFENTHVALTPNIYTNNYS 311
Cdd:pfam01697  76 -NKRVELRNQAAAQNDCLLRYKeaAKWIAFVDLDERLVPTKsPTTLEEFLREFADEPVISLQFRNRWVLKYNSIPAKYFS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   312 G---VRSLTFTDIFAPPKYIFNTSLIDICETHSPGKFLHKSTYTKM--ANGTVLHFRFNVKQIraKIVRKSYRFFPNDTA 386
Cdd:pfam01697 155 LkqlIGNMIFLKYRETGKCIVRPEKVNSTWIHFPRKFYPGYKLRKVdiSEGVIRHYRNPVWKD--DVFKKPFSKFPESET 232
                         250
                  ....*....|....*...
gi 17511165   387 G----HIRNMHDTMNKIF 400
Cdd:pfam01697 233 VigdfTITPIPEDLRRML 250
 
Name Accession Description Interval E-value
Glyco_transf_92 pfam01697
Glycosyltransferase family 92; Members of this family act as galactosyltransferases, belonging ...
156-400 4.04e-50

Glycosyltransferase family 92; Members of this family act as galactosyltransferases, belonging to glycosyltransferase family 92. The aligned region contains several conserved cysteine residues and several charged residues that may be catalytic residues. This is supported by the inclusion of this family in the GT-A glycosyl transferase superfamily.


Pssm-ID: 426386  Cd Length: 250  Bit Score: 171.00  E-value: 4.04e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   156 RGLTVCLQIVYY-YSQWQNVILYIEAWRAQGATRFIVFYHSSTEDTKKVLDYYEKLGLIELRPWPNIGELSSNISpmypk 234
Cdd:pfam01697   1 KDLVVCVAPLYFnYEQWQNLLEWIEYYKLQGATHFYIYLHSITEYDFKVLKEYEKTGYVELVPWPDIKFQPVAEP----- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   235 vDESVFIIATHMALQICSLEIK--TSLGIVADFDEVMVPDK-GTVLDHAMKEMTGKDIGALLFENTHVALTPNIYTNNYS 311
Cdd:pfam01697  76 -NKRVELRNQAAAQNDCLLRYKeaAKWIAFVDLDERLVPTKsPTTLEEFLREFADEPVISLQFRNRWVLKYNSIPAKYFS 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17511165   312 G---VRSLTFTDIFAPPKYIFNTSLIDICETHSPGKFLHKSTYTKM--ANGTVLHFRFNVKQIraKIVRKSYRFFPNDTA 386
Cdd:pfam01697 155 LkqlIGNMIFLKYRETGKCIVRPEKVNSTWIHFPRKFYPGYKLRKVdiSEGVIRHYRNPVWKD--DVFKKPFSKFPESET 232
                         250
                  ....*....|....*...
gi 17511165   387 G----HIRNMHDTMNKIF 400
Cdd:pfam01697 233 VigdfTITPIPEDLRRML 250
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH