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Conserved domains on  [gi|25148834|ref|NP_500415|]
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ShKT domain-containing protein [Caenorhabditis elegans]

Protein Classification

ShKT domain-containing protein( domain architecture ID 10644308)

ShKT (ShK toxin) domain-containing protein similar to Chlamydomonas reinhardtii peptidyl serine alpha-galactosyltransferase that catalyzes the transfer of alpha-galactosyl to Ser residues

CATH:  1.10.10.740
SCOP:  3000917
TCDB:  8.B.14

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ShKT smart00254
ShK toxin domain; ShK toxin domain
 80-112 2.88e-03

ShK toxin domain; ShK toxin domain


:

Pssm-ID: 214586 [Multi-domain]  Cd Length: 33  Bit Score: 34.28  E-value: 2.88e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 25148834     80 DLSPQCSVWAsTGQCsTNPMMMRQTCAMSCGTC 112
Cdd:smart00254   3 DRHPDCAAWA-KGFC-TNPFYMKSNCPKTCGFC 33
 
Name Accession Description Interval E-value
ShKT smart00254
ShK toxin domain; ShK toxin domain
 80-112 2.88e-03

ShK toxin domain; ShK toxin domain


Pssm-ID: 214586 [Multi-domain]  Cd Length: 33  Bit Score: 34.28  E-value: 2.88e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 25148834     80 DLSPQCSVWAsTGQCsTNPMMMRQTCAMSCGTC 112
Cdd:smart00254   3 DRHPDCAAWA-KGFC-TNPFYMKSNCPKTCGFC 33
PLN00052 PLN00052
prolyl 4-hydroxylase; Provisional
 80-114 5.27e-03

prolyl 4-hydroxylase; Provisional


Pssm-ID: 177683 [Multi-domain]  Cd Length: 310  Bit Score: 36.57  E-value: 5.27e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 25148834   80 DLSPQCSVWASTGQCSTNPMMM------RQTCAMSCGTCST 114
Cdd:PLN00052 270 DKSAHCAEWAAAGECEKNPVYMvgaegaPGNCRKSCGVCDS 310
 
Name Accession Description Interval E-value
ShKT smart00254
ShK toxin domain; ShK toxin domain
 80-112 2.88e-03

ShK toxin domain; ShK toxin domain


Pssm-ID: 214586 [Multi-domain]  Cd Length: 33  Bit Score: 34.28  E-value: 2.88e-03
                           10        20        30
                   ....*....|....*....|....*....|...
gi 25148834     80 DLSPQCSVWAsTGQCsTNPMMMRQTCAMSCGTC 112
Cdd:smart00254   3 DRHPDCAAWA-KGFC-TNPFYMKSNCPKTCGFC 33
PLN00052 PLN00052
prolyl 4-hydroxylase; Provisional
 80-114 5.27e-03

prolyl 4-hydroxylase; Provisional


Pssm-ID: 177683 [Multi-domain]  Cd Length: 310  Bit Score: 36.57  E-value: 5.27e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 25148834   80 DLSPQCSVWASTGQCSTNPMMM------RQTCAMSCGTCST 114
Cdd:PLN00052 270 DKSAHCAEWAAAGECEKNPVYMvgaegaPGNCRKSCGVCDS 310
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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