NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|115534576|ref|NP_503872|]
View 

DUF19 domain-containing protein [Caenorhabditis elegans]

Protein Classification

DUF19 domain-containing protein( domain architecture ID 10481514)

DUF19 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF19 pfam01579
Domain of unknown function (DUF19); This presumed domain has no known function. It is found in ...
 13-155 2.16e-35

Domain of unknown function (DUF19); This presumed domain has no known function. It is found in one or two copies in several Caenorhabditis elegans proteins. It is roughly 130 amino acids long. The domain contains 12 conserved cysteines which suggests that the domain is an extracellular domain and that these cysteines form six intradomain disulphide bridges. The GO annotation for this protein indicates that it has a function in nematode larval development and has a positive regulation of growth rate.


:

Pssm-ID: 426332  Cd Length: 154  Bit Score: 120.27  E-value: 2.16e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115534576   13 FGSFMAKMYFLDMKKPSSLKKFRDSCGAVADCMESLECSDNAEL-PATTTVKDACENIIFLTSEFLPCLTKLDELKPAPE 91
Cdd:pfam01579  16 LGDFLEKTDELDIKDKDELKKFNKSCESFLSCFKTLKCLEDDEAvKAKNKIEKYCDAVKFLSTDFAECMEKLYKAKKNSE 95

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 115534576   92 CAKDWNPSPDKngsgeeKKPEELCTTMFGKDNCMKKLIIDTCGESDWQLLLNRFKA-APVLKQCD 155
Cdd:pfam01579  96 CFKDWDPFPKD------EKLKEKCKNYFGKDNCMKKEITETCGKEEWEYFKKHYLKlNDILKKCD 154
 
Name Accession Description Interval E-value
DUF19 pfam01579
Domain of unknown function (DUF19); This presumed domain has no known function. It is found in ...
 13-155 2.16e-35

Domain of unknown function (DUF19); This presumed domain has no known function. It is found in one or two copies in several Caenorhabditis elegans proteins. It is roughly 130 amino acids long. The domain contains 12 conserved cysteines which suggests that the domain is an extracellular domain and that these cysteines form six intradomain disulphide bridges. The GO annotation for this protein indicates that it has a function in nematode larval development and has a positive regulation of growth rate.


Pssm-ID: 426332  Cd Length: 154  Bit Score: 120.27  E-value: 2.16e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115534576   13 FGSFMAKMYFLDMKKPSSLKKFRDSCGAVADCMESLECSDNAEL-PATTTVKDACENIIFLTSEFLPCLTKLDELKPAPE 91
Cdd:pfam01579  16 LGDFLEKTDELDIKDKDELKKFNKSCESFLSCFKTLKCLEDDEAvKAKNKIEKYCDAVKFLSTDFAECMEKLYKAKKNSE 95

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 115534576   92 CAKDWNPSPDKngsgeeKKPEELCTTMFGKDNCMKKLIIDTCGESDWQLLLNRFKA-APVLKQCD 155
Cdd:pfam01579  96 CFKDWDPFPKD------EKLKEKCKNYFGKDNCMKKEITETCGKEEWEYFKKHYLKlNDILKKCD 154
 
Name Accession Description Interval E-value
DUF19 pfam01579
Domain of unknown function (DUF19); This presumed domain has no known function. It is found in ...
 13-155 2.16e-35

Domain of unknown function (DUF19); This presumed domain has no known function. It is found in one or two copies in several Caenorhabditis elegans proteins. It is roughly 130 amino acids long. The domain contains 12 conserved cysteines which suggests that the domain is an extracellular domain and that these cysteines form six intradomain disulphide bridges. The GO annotation for this protein indicates that it has a function in nematode larval development and has a positive regulation of growth rate.


Pssm-ID: 426332  Cd Length: 154  Bit Score: 120.27  E-value: 2.16e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115534576   13 FGSFMAKMYFLDMKKPSSLKKFRDSCGAVADCMESLECSDNAEL-PATTTVKDACENIIFLTSEFLPCLTKLDELKPAPE 91
Cdd:pfam01579  16 LGDFLEKTDELDIKDKDELKKFNKSCESFLSCFKTLKCLEDDEAvKAKNKIEKYCDAVKFLSTDFAECMEKLYKAKKNSE 95

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 115534576   92 CAKDWNPSPDKngsgeeKKPEELCTTMFGKDNCMKKLIIDTCGESDWQLLLNRFKA-APVLKQCD 155
Cdd:pfam01579  96 CFKDWDPFPKD------EKLKEKCKNYFGKDNCMKKEITETCGKEEWEYFKKHYLKlNDILKKCD 154
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH