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Conserved domains on  [gi|17557904|ref|NP_504829|]
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SAYSvFN domain-containing protein [Caenorhabditis elegans]

Protein Classification

SAYSvFN domain-containing protein( domain architecture ID 10563108)

SAYSvFN domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SAYSvFN pfam10260
Uncharacterized conserved domain (SAYSvFN); This domain of approximately 75 residues contains ...
 73-139 9.68e-32

Uncharacterized conserved domain (SAYSvFN); This domain of approximately 75 residues contains a highly conserved SATSv/iFN motif. The function is unknown but the domain is conserved from plants to humans.


:

Pssm-ID: 431179  Cd Length: 70  Bit Score: 107.66  E-value: 9.68e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 17557904    73 VVVYVVGQALAAWVQFGAVFFILSLILFTYWNT--GRRRRGEMSAYSVFNDNCERLAGSMTAEHFERDM 139
Cdd:pfam10260   2 FLLWLLLQYIAIELEFGAVFFILSGFYLIYTNLrtGKRKEGELSAYSVFNKGCERIPGTLDAEQFEREI 70
 
Name Accession Description Interval E-value
SAYSvFN pfam10260
Uncharacterized conserved domain (SAYSvFN); This domain of approximately 75 residues contains ...
 73-139 9.68e-32

Uncharacterized conserved domain (SAYSvFN); This domain of approximately 75 residues contains a highly conserved SATSv/iFN motif. The function is unknown but the domain is conserved from plants to humans.


Pssm-ID: 431179  Cd Length: 70  Bit Score: 107.66  E-value: 9.68e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 17557904    73 VVVYVVGQALAAWVQFGAVFFILSLILFTYWNT--GRRRRGEMSAYSVFNDNCERLAGSMTAEHFERDM 139
Cdd:pfam10260   2 FLLWLLLQYIAIELEFGAVFFILSGFYLIYTNLrtGKRKEGELSAYSVFNKGCERIPGTLDAEQFEREI 70
 
Name Accession Description Interval E-value
SAYSvFN pfam10260
Uncharacterized conserved domain (SAYSvFN); This domain of approximately 75 residues contains ...
 73-139 9.68e-32

Uncharacterized conserved domain (SAYSvFN); This domain of approximately 75 residues contains a highly conserved SATSv/iFN motif. The function is unknown but the domain is conserved from plants to humans.


Pssm-ID: 431179  Cd Length: 70  Bit Score: 107.66  E-value: 9.68e-32
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 17557904    73 VVVYVVGQALAAWVQFGAVFFILSLILFTYWNT--GRRRRGEMSAYSVFNDNCERLAGSMTAEHFERDM 139
Cdd:pfam10260   2 FLLWLLLQYIAIELEFGAVFFILSGFYLIYTNLrtGKRKEGELSAYSVFNKGCERIPGTLDAEQFEREI 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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