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Conserved domains on  [gi|17565698|ref|NP_507813|]
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Nucleoside hydrolase [Caenorhabditis elegans]

Protein Classification

nucleoside hydrolase( domain architecture ID 10119096)

nucleoside hydrolase cleaves the N-glycosidic bond in nucleosides generating ribose and the respective base; similar to Aedes aegypti salivary purine nucleosidase

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
nuc_hydro_CeIAG cd02649
nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring ...
6-319 1.93e-122

nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR).


:

Pssm-ID: 239115 [Multi-domain]  Cd Length: 306  Bit Score: 354.26  E-value: 1.93e-122
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   6 VKLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPKddTVSD 85
Cdd:cd02649   1 RKLIIDTDCGGDDAWALLMALASPNVEVLAITCVHGNTNVEQVVKNALRVLEACGRRDIPVYRGASKPLLGPGP--TAAY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  86 FFGIDGIGDKPEEFPKVErsdFEGEGKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYY 164
Cdd:cd02649  79 FHGKDGFGDVGFPEPKDE---LELQKEHAVDAIIRLVREYpGEITLVALGPLTNLALAYRLDPSLPQKIKRLYIMGGNRE 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 165 AVGNVDggSSAEYNFHGDPEAASIVLRRMKCPITIVPWEAFYFESKT-----------HDASVDFSAHLKYGTPLANYLS 233
Cdd:cd02649 156 GVGNTT--PAAEFNFHVDPEAAHIVLNSFGCPITIVPWETTLLAFPLdwefedkwanrLEKALFAESLNRREYAFASEGL 233
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 234 latsigrvkceaNGRQYSYCDEIAVATAIDEDkIAKKSQYLYVDVELNGTKTRGQVVVDWTEQLWSNEEAPNQHTHRRVK 313
Cdd:cd02649 234 ------------GGDGWVPCDALAVAAALDPS-IITRRLTYAVDVELHGELTRGQMVVDWLGTLKKKPNARVITKIDREK 300

                ....*.
gi 17565698 314 FVTSYD 319
Cdd:cd02649 301 FKELLY 306
 
Name Accession Description Interval E-value
nuc_hydro_CeIAG cd02649
nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring ...
6-319 1.93e-122

nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR).


Pssm-ID: 239115 [Multi-domain]  Cd Length: 306  Bit Score: 354.26  E-value: 1.93e-122
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   6 VKLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPKddTVSD 85
Cdd:cd02649   1 RKLIIDTDCGGDDAWALLMALASPNVEVLAITCVHGNTNVEQVVKNALRVLEACGRRDIPVYRGASKPLLGPGP--TAAY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  86 FFGIDGIGDKPEEFPKVErsdFEGEGKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYY 164
Cdd:cd02649  79 FHGKDGFGDVGFPEPKDE---LELQKEHAVDAIIRLVREYpGEITLVALGPLTNLALAYRLDPSLPQKIKRLYIMGGNRE 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 165 AVGNVDggSSAEYNFHGDPEAASIVLRRMKCPITIVPWEAFYFESKT-----------HDASVDFSAHLKYGTPLANYLS 233
Cdd:cd02649 156 GVGNTT--PAAEFNFHVDPEAAHIVLNSFGCPITIVPWETTLLAFPLdwefedkwanrLEKALFAESLNRREYAFASEGL 233
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 234 latsigrvkceaNGRQYSYCDEIAVATAIDEDkIAKKSQYLYVDVELNGTKTRGQVVVDWTEQLWSNEEAPNQHTHRRVK 313
Cdd:cd02649 234 ------------GGDGWVPCDALAVAAALDPS-IITRRLTYAVDVELHGELTRGQMVVDWLGTLKKKPNARVITKIDREK 300

                ....*.
gi 17565698 314 FVTSYD 319
Cdd:cd02649 301 FKELLY 306
URH1 COG1957
Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; ...
5-330 3.09e-70

Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; Inosine-uridine nucleoside N-ribohydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441560 [Multi-domain]  Cd Length: 310  Bit Score: 221.18  E-value: 3.09e-70
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   5 KVKLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPkdDTVS 84
Cdd:COG1957   2 MRKVIIDTDPGIDDALALLLALASPEIDLLGITTVAGNVPLEQTTRNALKLLELAGRTDVPVAAGAARPLVRPL--VTAE 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  85 DFFGIDGIGDkpEEFPKVERsdfEGEGKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNY 163
Cdd:COG1957  80 HVHGEDGLGG--VDLPEPTR---PPEPEHAVDFIIETLRAApGEVTLVALGPLTNLALALRKDPELAERIKRIVIMGGAF 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 164 YAVGNVdgGSSAEYNFHGDPEAASIVLRRmKCPITIVPWEAfyfeskTHDASVDFsAHLKY----GTPLANYLS--LATS 237
Cdd:COG1957 155 FVPGNV--TPVAEFNIYVDPEAAKIVFAS-GIPITMVGLDV------THQALLTP-EDLARlaalGTPLGRFLAdlLDFY 224
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 238 IGRVKcEANGRQYSYC-DEIAVATAIDEDKIakKSQYLYVDVELNGTKTRGQVVVDWTEQLwsnEEAPNqhthrrVKFVT 316
Cdd:COG1957 225 LDFYR-ERYGLDGCPLhDPLAVAYLLDPELF--TTRPAPVDVETDGELTRGQTVVDWRGVT---GRPPN------ARVAL 292
                       330
                ....*....|....
gi 17565698 317 SYDVHTVDKWLHAA 330
Cdd:COG1957 293 DVDAERFLDLLLER 306
IU_nuc_hydro pfam01156
Inosine-uridine preferring nucleoside hydrolase;
8-320 8.94e-60

Inosine-uridine preferring nucleoside hydrolase;


Pssm-ID: 460086 [Multi-domain]  Cd Length: 253  Bit Score: 192.42  E-value: 8.94e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698     8 LVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGaaksilslpkddtvsdff 87
Cdd:pfam01156   1 VIIDTDPGIDDALALLLALASPEIELLGITTVAGNVSLEQTTRNALRLLELGGRDDIPVYAG------------------ 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698    88 gidgigdkpeefpkversdfegegkhaslaliDILRENRDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYAVG 167
Cdd:pfam01156  63 --------------------------------EAIREPGEVTLVATGPLTNLALALRLDPELAKKIKELVIMGGAFGVRG 110
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   168 NVdgGSSAEYNFHGDPEAASIVLRRmKCPITIVPWEAfyfeskTHDASV---DFSAHLKYGTPLANYLSLATS--IGRVK 242
Cdd:pfam01156 111 NV--TPAAEFNIFVDPEAAKIVFTS-GLPITMVPLDV------THQALLtpeDLERLAALGTPLGRFLADLLRfyAEFYR 181
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17565698   243 CEANGRQYSYCDEIAVATAIDEDKIAKKSqyLYVDVELNGTKTRGQVVVDWTEQLwsnEEAPNqhthrrVKFVTSYDV 320
Cdd:pfam01156 182 ERFGIDGPPLHDPLAVAVALDPELFTTRR--LNVDVETTGGLTRGQTVVDDRGGW---GKPPN------VRVATDVDV 248
PLN02717 PLN02717
uridine nucleosidase
7-190 4.20e-32

uridine nucleosidase


Pssm-ID: 178319 [Multi-domain]  Cd Length: 316  Bit Score: 122.02  E-value: 4.20e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698    7 KLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPKDdTVSDF 86
Cdd:PLN02717   2 KLIIDTDPGIDDAMAILMALRSPEVEVIGLTTIFGNVTTKLATRNALHLLEMAGRPDVPVAEGSHEPLKGGTKP-RIADF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   87 F-GIDGIGDKPEEFPKVERSDfegegKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYY 164
Cdd:PLN02717  81 VhGSDGLGNTNLPPPKGKKIE-----KSAAEFLVEKVSEYpGEVTVVALGPLTNLALAIKLDPSFAKKVGQIVVLGGAFF 155
                        170       180
                 ....*....|....*....|....*.
gi 17565698  165 AVGNVDggSSAEYNFHGDPEAASIVL 190
Cdd:PLN02717 156 VNGNVN--PAAEANIFGDPEAADIVF 179
 
Name Accession Description Interval E-value
nuc_hydro_CeIAG cd02649
nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring ...
6-319 1.93e-122

nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the purine-preferring nucleoside hydrolase (IAG-NH) from C. elegans and the salivary purine nucleosidase from Aedes aegypti. C. elegans IAG-NH exhibits a high affinity for the substrate analogue p-nitrophenylriboside (p-NPR).


Pssm-ID: 239115 [Multi-domain]  Cd Length: 306  Bit Score: 354.26  E-value: 1.93e-122
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   6 VKLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPKddTVSD 85
Cdd:cd02649   1 RKLIIDTDCGGDDAWALLMALASPNVEVLAITCVHGNTNVEQVVKNALRVLEACGRRDIPVYRGASKPLLGPGP--TAAY 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  86 FFGIDGIGDKPEEFPKVErsdFEGEGKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYY 164
Cdd:cd02649  79 FHGKDGFGDVGFPEPKDE---LELQKEHAVDAIIRLVREYpGEITLVALGPLTNLALAYRLDPSLPQKIKRLYIMGGNRE 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 165 AVGNVDggSSAEYNFHGDPEAASIVLRRMKCPITIVPWEAFYFESKT-----------HDASVDFSAHLKYGTPLANYLS 233
Cdd:cd02649 156 GVGNTT--PAAEFNFHVDPEAAHIVLNSFGCPITIVPWETTLLAFPLdwefedkwanrLEKALFAESLNRREYAFASEGL 233
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 234 latsigrvkceaNGRQYSYCDEIAVATAIDEDkIAKKSQYLYVDVELNGTKTRGQVVVDWTEQLWSNEEAPNQHTHRRVK 313
Cdd:cd02649 234 ------------GGDGWVPCDALAVAAALDPS-IITRRLTYAVDVELHGELTRGQMVVDWLGTLKKKPNARVITKIDREK 300

                ....*.
gi 17565698 314 FVTSYD 319
Cdd:cd02649 301 FKELLY 306
URH1 COG1957
Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; ...
5-330 3.09e-70

Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism]; Inosine-uridine nucleoside N-ribohydrolase is part of the Pathway/BioSystem: Pyrimidine salvage


Pssm-ID: 441560 [Multi-domain]  Cd Length: 310  Bit Score: 221.18  E-value: 3.09e-70
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   5 KVKLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPkdDTVS 84
Cdd:COG1957   2 MRKVIIDTDPGIDDALALLLALASPEIDLLGITTVAGNVPLEQTTRNALKLLELAGRTDVPVAAGAARPLVRPL--VTAE 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  85 DFFGIDGIGDkpEEFPKVERsdfEGEGKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNY 163
Cdd:COG1957  80 HVHGEDGLGG--VDLPEPTR---PPEPEHAVDFIIETLRAApGEVTLVALGPLTNLALALRKDPELAERIKRIVIMGGAF 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 164 YAVGNVdgGSSAEYNFHGDPEAASIVLRRmKCPITIVPWEAfyfeskTHDASVDFsAHLKY----GTPLANYLS--LATS 237
Cdd:COG1957 155 FVPGNV--TPVAEFNIYVDPEAAKIVFAS-GIPITMVGLDV------THQALLTP-EDLARlaalGTPLGRFLAdlLDFY 224
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 238 IGRVKcEANGRQYSYC-DEIAVATAIDEDKIakKSQYLYVDVELNGTKTRGQVVVDWTEQLwsnEEAPNqhthrrVKFVT 316
Cdd:COG1957 225 LDFYR-ERYGLDGCPLhDPLAVAYLLDPELF--TTRPAPVDVETDGELTRGQTVVDWRGVT---GRPPN------ARVAL 292
                       330
                ....*....|....
gi 17565698 317 SYDVHTVDKWLHAA 330
Cdd:COG1957 293 DVDAERFLDLLLER 306
IU_nuc_hydro pfam01156
Inosine-uridine preferring nucleoside hydrolase;
8-320 8.94e-60

Inosine-uridine preferring nucleoside hydrolase;


Pssm-ID: 460086 [Multi-domain]  Cd Length: 253  Bit Score: 192.42  E-value: 8.94e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698     8 LVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGaaksilslpkddtvsdff 87
Cdd:pfam01156   1 VIIDTDPGIDDALALLLALASPEIELLGITTVAGNVSLEQTTRNALRLLELGGRDDIPVYAG------------------ 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698    88 gidgigdkpeefpkversdfegegkhaslaliDILRENRDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYAVG 167
Cdd:pfam01156  63 --------------------------------EAIREPGEVTLVATGPLTNLALALRLDPELAKKIKELVIMGGAFGVRG 110
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   168 NVdgGSSAEYNFHGDPEAASIVLRRmKCPITIVPWEAfyfeskTHDASV---DFSAHLKYGTPLANYLSLATS--IGRVK 242
Cdd:pfam01156 111 NV--TPAAEFNIFVDPEAAKIVFTS-GLPITMVPLDV------THQALLtpeDLERLAALGTPLGRFLADLLRfyAEFYR 181
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17565698   243 CEANGRQYSYCDEIAVATAIDEDKIAKKSqyLYVDVELNGTKTRGQVVVDWTEQLwsnEEAPNqhthrrVKFVTSYDV 320
Cdd:pfam01156 182 ERFGIDGPPLHDPLAVAVALDPELFTTRR--LNVDVETTGGLTRGQTVVDDRGGW---GKPPN------VRVATDVDV 248
nuc_hydro_IU_UC_XIUA cd02651
nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, ...
7-293 1.07e-45

nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains proteins similar to nucleoside hydrolases which hydrolyze both pyrimidine and purine ribonucleosides: the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the inosine-uridine-xanthosine preferring nucleoside hydrolase RihC from Escherichia coli and the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium. This group also contains proteins similar to the pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases URH1 from Saccharomyces cerevisiae, E. coli RihA and E. coli RihB. E. coli RihA is equally efficient with uridine and cytidine, E. coli RihB prefers cytidine over uridine. S. cerevisiae URH1 prefers uridine over cytidine.


Pssm-ID: 239117 [Multi-domain]  Cd Length: 302  Bit Score: 157.32  E-value: 1.07e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   7 KLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPKddTVSDF 86
Cdd:cd02651   1 PIIIDCDPGHDDAVAILLALFHPELDLLGITTVAGNVPLEKTTRNALKLLTLLGRTDVPVAAGAARPLVRPLI--TASDI 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  87 FGIDGIGDKpeEFPKVersDFEGEGKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNyYA 165
Cdd:cd02651  79 HGESGLDGA--DLPPP---PRRPEDIHAVDAIIDTLRASpEPITLVATGPLTNIALLLRKYPELAERIKEIVLMGGA-LG 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 166 VGNVdgGSSAEYNFHGDPEAASIVLRRmKCPITIVPWEAfyfeskTHDA--SVDFSAHLKY-GTPLANYLS-----LATS 237
Cdd:cd02651 153 RGNI--TPAAEFNIFVDPEAAKIVFNS-GIPITMVPLDV------THKAlaTPEVIERIRAlGNPVGKMLAelldfFAET 223
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 17565698 238 IGRVKcEANGRQYsycDEIAVATAIDEDKIakKSQYLYVDVELNGTKTRGQVVVDW 293
Cdd:cd02651 224 YGSAF-TEGPPLH---DPCAVAYLLDPELF--TTKRANVDVETEGELTRGRTVVDL 273
nuc_hydro cd00455
nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in ...
8-301 1.74e-42

nuc_hydro: Nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. This group contains eukaryotic, bacterial and archeal proteins similar to the inosine-uridine preferring nucleoside hydrolase from Crithidia fasciculata, the xanthosine-inosine-uridine-adenosine-preferring nucleoside hydrolase RihC from Salmonella enterica serovar Typhimurium, the purine-specific inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax and, pyrimidine-specific uridine-cytidine preferring nucleoside hydrolases such as URH1 from Saccharomyces cerevisiae, RihA and RihB from Escherichia coli. Nucleoside hydrolases are of interest as a target for antiprotozoan drugs as, no nucleoside hydrolase activity or genes encoding these enzymes have been detected in humans and, parasitic protozoans lack de novo purine synthesis relying on nucleoside hydrolase to scavenge purine and/or pyrimidines from the environment.


Pssm-ID: 238257 [Multi-domain]  Cd Length: 295  Bit Score: 149.02  E-value: 1.74e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   8 LVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKsilslPKDDTVSDFF 87
Cdd:cd00455   1 VILDTDPGIDDAFALMYALLHPEIELVGIVATYGNVTLEQATQNAAYLLELLGRLDIPVYAGATR-----PLTGEIPAAY 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  88 -GIDGIGDKPEEFPKVERSDfegeGKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYA 165
Cdd:cd00455  76 pEIHGEGGLGLPIPPIIEAD----DPEAVQLLIDLIRKYpDEITIVALGPLTNLAMAFILDPDIKDRVKEIVIMGGAFLV 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 166 VGNVDggSSAEYNFHGDPEAASIVLRRMKcPITIVPWEAfyfeskTHDAsVDFSAHLKYGTPlanylsLATSIGRVKCEA 245
Cdd:cd00455 152 PGNVT--PVAEANFYGDPEAANIVFNSAK-NLTIVPLDV------TNQA-VLTPPMVERIFE------QGTSIGLLIKPM 215
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 17565698 246 NGRQYSY-----------CDEIAVATAIDEDkIAKKSqYLYVDVELNGtKTRGQVVVDWTEQLWSNE 301
Cdd:cd00455 216 IDYYYKAyqkpgiegspiHDPLAVAYLLNPS-MFDYS-KVPVDVDTDG-LTRGQTIADFRENPGNGV 279
nuc_hydro_CaPnhB cd02650
NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes ...
7-305 2.44e-38

NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB). Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239116 [Multi-domain]  Cd Length: 304  Bit Score: 138.18  E-value: 2.44e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   7 KLVIDSD-GVsDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPKDdtVSD 85
Cdd:cd02650   1 KLILDTDpGI-DDAMALAYALAHPDVDLIGVTTVYGNVTIETATRNALALLELFGRPDVPVAEGAAKPLTRPPFR--IAT 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  86 FF-GIDGIGDKPEEFPKVERSDfegegKHASLALIDILRENRDA-TLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNY 163
Cdd:cd02650  78 FVhGDNGLGDVELPAPPRQPED-----ESAADFLIELANEYPGElTLVAVGPLTNLALALARDPDFAKLVKQVVVMGGAF 152
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 164 YAVGNVDggSSAEYNFHGDPEAASIVlrrMKCP--ITIVPWEAfyfeskTHDASVDfSAHLK----YGTPLANYLS---- 233
Cdd:cd02650 153 TVPGNVT--PAAEANIHGDPEAADIV---FTAGadLTMVGLDV------TTQTLLT-REDLDelrdSGGKAGQFLAdmld 220
                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 17565698 234 -----LATSIGRVKCEANgrqysycDEIAVATAIDEDKIAKKSqyLYVDVELNGtKTRGQVVVDWT-EQLWSNEEAPN 305
Cdd:cd02650 221 yyidfYQESPGLRGCALH-------DPLAVAAAVDPSLFTTRE--GVVRVETEG-PTRGRTIGDRDgRRFWDSSPNAT 288
nuc_hydro_3 cd02653
NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial ...
7-293 9.74e-36

NH_3: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239119 [Multi-domain]  Cd Length: 320  Bit Score: 131.73  E-value: 9.74e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   7 KLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSiLSLPKDDTvSDF 86
Cdd:cd02653   1 KVIIDCDPGIDDALALLYLLASPDLDVVGITTTAGNVPVEQVAANALGVLELLGRTDIPVYLGADKP-LAGPLTTA-QDT 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  87 FGIDGIGDKPEEFPKVERSDFEGEGkhaslALIDILRENRDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYYAV 166
Cdd:cd02653  79 HGPDGLGYAELPASTRTLSDESAAQ-----AWVDLARAHPDLIGLATGPLTNLALALREEPELPRLLRRLVIMGGAFNSR 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 167 GNVdgGSSAEYNFHGDPEAASIVLRRMKCP---ITIVPweafyfeskthdasVDFSAHLKYGTPLANYL-SLATSIGRVK 242
Cdd:cd02653 154 GNT--SPVAEWNYWVDPEAAKEVLAAFGGHpvrPTICG--------------LDVTRAVVLTPNLLERLaRAKDSVGAFI 217
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 17565698 243 CEA--------NGRQYSYC----DEIAVATAIDEDKIAKKSqyLYVDVELNGTkTRGQVVVDW 293
Cdd:cd02653 218 EDAlrfyfefhWAYGHGYGavihDPLAAAVALNPNLARGRP--AYVDVECTGV-LTGQTVVDW 277
PLN02717 PLN02717
uridine nucleosidase
7-190 4.20e-32

uridine nucleosidase


Pssm-ID: 178319 [Multi-domain]  Cd Length: 316  Bit Score: 122.02  E-value: 4.20e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698    7 KLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPKDdTVSDF 86
Cdd:PLN02717   2 KLIIDTDPGIDDAMAILMALRSPEVEVIGLTTIFGNVTTKLATRNALHLLEMAGRPDVPVAEGSHEPLKGGTKP-RIADF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   87 F-GIDGIGDKPEEFPKVERSDfegegKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNYY 164
Cdd:PLN02717  81 VhGSDGLGNTNLPPPKGKKIE-----KSAAEFLVEKVSEYpGEVTVVALGPLTNLALAIKLDPSFAKKVGQIVVLGGAFF 155
                        170       180
                 ....*....|....*....|....*.
gi 17565698  165 AVGNVDggSSAEYNFHGDPEAASIVL 190
Cdd:PLN02717 156 VNGNVN--PAAEANIFGDPEAADIVF 179
nuc_hydro_CjNH cd02654
nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. ...
7-327 1.77e-30

nuc_hydro_CjNH. Nucleoside hydrolases similar to Campylobacter jejuni nucleoside hydrolase. This group contains eukaryotic and bacterial proteins similar to C. jejuni nucleoside hydrolase. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity. C. jejuni nucleoside hydrolase is inactive against natural nucleosides or against common nucleoside analogues.


Pssm-ID: 239120 [Multi-domain]  Cd Length: 318  Bit Score: 117.66  E-value: 1.77e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   7 KLVIDSDGV----SDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSlPKDDT 82
Cdd:cd02654   1 KVILDNDIAmgrdTDDGLALALLLWSPEVELLGLSAVSGNCWLSAVTYNVLRMLELAGADAIPVYAGANTPLGR-TNRAF 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  83 --VSDFFGI---DGIGDKPEEFPKVERSDFEGEGKHASLALIDILREN-RDATLVTIGPLTNVAIALQLCEEFSTYPSRL 156
Cdd:cd02654  80 haWESLYGAylwQGAWSPEYSDMYTNASIIRNASIPAALFMIEMVRKHpHEVSIVAAGPLTNLALALRIDPDFAPLAKEL 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 157 VIMGGNYYAVGNVDGGSSA-EYNFHGDPEAASIVLrRMKCPITIVPWEAFYFESKTHDasvdfsaHLKYGTPLANYLS-- 233
Cdd:cd02654 160 VIMGGYLDDIGEFVNRHYAsDFNLIMDPEAASIVL-TAPWKSITIPGNVTNRTCLTPE-------QIKADDPLRDFIRet 231
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 234 LATSIGRVK-CEANGRQYSYCDEIAVATAIDeDKIAKKSQYLYVDVElNGTKTRGQVVVDWTEQLwsneeAPNQHThRRV 312
Cdd:cd02654 232 LDLPIDYAKeFVGTGDGLPMWDELASAVALD-PELATSSETFYIDVQ-TDSDGGGQLIWPEDLLL-----AKGLRP-YHV 303
                       330
                ....*....|....*
gi 17565698 313 KFVTSYDVHTVDKWL 327
Cdd:cd02654 304 KVITAVDVAAFLNLI 318
PRK10768 PRK10768
ribonucleoside hydrolase RihC; Provisional
5-327 4.38e-30

ribonucleoside hydrolase RihC; Provisional


Pssm-ID: 182713 [Multi-domain]  Cd Length: 304  Bit Score: 116.16  E-value: 4.38e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698    5 KVKLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDrSNIPVYKGAAKSILSLPKDDT-V 83
Cdd:PRK10768   2 RLPIILDTDPGIDDAVAIAAALFAPELDLKLITTVAGNVSVEKTTRNALKLLHFFN-SDVPVAQGAAKPLVRPLRDAAsV 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   84 SDFFGIDGIgdkpeEFPKVERSDFEgegKHASLALIDILRENRDA-TLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGN 162
Cdd:PRK10768  81 HGESGMEGY-----DFPEHTRKPLS---IPAVEAMRDALMNAPEPvTLVAIGPLTNIALLLSTYPEVKPYIKRIVLMGGS 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  163 yYAVGNVdgGSSAEYNFHGDPEAASIVLRRmKCPITI----VPWEAFYfeskTHDASVDFSAHLKYGTPLANYL------ 232
Cdd:PRK10768 153 -AGRGNV--TPNAEFNIAVDPEAAAIVFRS-GIPIVMcgldVTNQALL----TPDYLATLPELNRTGKMLHALFshyrsg 224
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  233 SLATSIgrvkceangRQYSYCdeiAVATAIDEDKIakKSQYLYVDVELNGTKTRGQVVVDwTEQLWSNEeaPNqhthrrV 312
Cdd:PRK10768 225 SMQTGL---------RMHDVC---AIAYLLRPELF--TLKPCFVDVETQGEFTAGATVVD-IDGRLGKP--AN------A 281
                        330
                 ....*....|....*
gi 17565698  313 KFVTSYDVHTVDKWL 327
Cdd:PRK10768 282 QVALDIDVDGFQKWF 296
nuc_hydro_1 cd02648
NH_1: A subgroup of nucleoside hydrolases. This group contains fungal proteins similar to ...
5-292 6.34e-23

NH_1: A subgroup of nucleoside hydrolases. This group contains fungal proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239114 [Multi-domain]  Cd Length: 367  Bit Score: 98.03  E-value: 6.34e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   5 KVKLVIDSDGVSDDVRAISLALQHP-KAEILAFTAVHGCVTVDQACANI---------KRTIRANDRSNIPVY-KGAAKS 73
Cdd:cd02648   1 PHPIIIDTDPGVDDVLAILLALSSPeEVDVALISLTFGNTTLDHALRNVlrlfhvlerERAWRATPGVRYRAFsADAEKP 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  74 ILSLPKDD-------TVSDFFGIDGIG---DKPEEFPKVERSD------FEGEGKHASLALIDILRENRD--ATLVTIGP 135
Cdd:cd02648  81 IVASGSDQplegerlTASYFHGRDGLSgvhWLHPDFTPVETWIpeivapLTPSDKPAYDVILDILREEPDhtVTIAALGP 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 136 LTNVAIALQLCEEFSTYPSRLVIMGGNYYAVGNVDggSSAEYNFHGDPEAASIV---------LRRMKCPITIVPWE--- 203
Cdd:cd02648 161 LTNLAAAARKDPETFAKVGEVVVMGGAIDVPGNTS--PVAEFNCFADPYAAAVVideppstapEARRKLPLQVFPLDitt 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698 204 --AFYFESKTHDASVDFSAHLKyGTPLANYLS-------------LATSIGRVKCEANGRQYsycDEIAVATAIDEDKIA 268
Cdd:cd02648 239 ghTLPYSSLFATYVTPRDAPER-GSPLARWLEhvfistflthpraFTPEEFLPDRSELFEMH---DPLAVWYAIFADMPA 314
                       330       340       350
                ....*....|....*....|....*....|..
gi 17565698 269 K--------KSQYLYVDVELNGTKTRGQVVVD 292
Cdd:cd02648 315 TgsidgngwKHTPRDFRVETSGQWTRGMCVVD 346
rihA PRK10443
ribonucleoside hydrolase 1; Provisional
7-216 1.16e-22

ribonucleoside hydrolase 1; Provisional


Pssm-ID: 182465 [Multi-domain]  Cd Length: 311  Bit Score: 96.28  E-value: 1.16e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698    7 KLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSIL-SLPKDDTVSD 85
Cdd:PRK10443   4 PIILDCDPGHDDAIALVLALASPELDVKAVTTSAGNQTPEKTLRNALRMLTLLNRTDIPVAGGAVKPLMrELIIADNVHG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   86 FFGIDGigdkpeefPKVERSDFEGEGKHASLALIDILRENRDA-TLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGnyy 164
Cdd:PRK10443  84 ESGLDG--------PALPEPTFAPQNCTAVELMAKTLRESAEPvTLVSTGPQTNVALLLASHPELHSKIARIVIMGG--- 152
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 17565698  165 AVGNVDGGSSAEYNFHGDPEAASIVLRRmKCPITIVPWEAfyfeskTHDASV 216
Cdd:PRK10443 153 AMGLGNWTPAAEFNIYVDPEAAEIVFQS-GIPIVMAGLDV------THKAQI 197
rihB PRK09955
ribosylpyrimidine nucleosidase;
3-191 1.86e-21

ribosylpyrimidine nucleosidase;


Pssm-ID: 182166 [Multi-domain]  Cd Length: 313  Bit Score: 93.09  E-value: 1.86e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698    3 VDKVKLVIDSDGVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANiKRTIRANDRSNIPVYKGAAKSILslpKDDT 82
Cdd:PRK09955   1 MEKRKIILDCDPGHDDAIAMMMAAKHPAIDLLGITIVAGNQTLDKTLIN-GLNVCQKLEINVPVYAGMPQPIM---RQQI 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   83 VSDFF----GIDGigdkpeefPKVERSDFEGEGKHASLALID-ILRENRDATLVTIGPLTNVAIALQLCEEFSTYPSRLV 157
Cdd:PRK09955  77 VADNIhgetGLDG--------PVFEPLTRQAESTHAVKYIIDtLMASDGDITLVPVGPLSNIAVAMRMQPAILPKIREIV 148
                        170       180       190
                 ....*....|....*....|....*....|....
gi 17565698  158 IMGGNyYAVGNVDggSSAEYNFHGDPEAASIVLR 191
Cdd:PRK09955 149 LMGGA-YGTGNFT--PSAEFNIFADPEAARVVFT 179
nuc_hydro_TvIAG cd02647
nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring ...
8-204 1.62e-16

nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. Nucleoside hydrolases vary in their substrate specificity. This group contains eukaryotic and bacterial proteins similar to the purine specific inosine-adenosine-guanosine-preferring nucleoside hydrolase (IAG-NH) from T. vivax. T. vivax IAG-NH is of the order of a thousand to ten thousand fold more specific towards the naturally occurring purine nucleosides, than towards the pyrimidine nucleosides.


Pssm-ID: 239113 [Multi-domain]  Cd Length: 312  Bit Score: 79.00  E-value: 1.62e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   8 LVIDSDGVSDDVRAISLALQHPKAEILAFT---AVHGCVTVDQACANIKRTIRANDRSNIPVYKGAAKSILSLPKDDTVS 84
Cdd:cd02647   3 VIFDHDGNVDDLVALLLLLKNEKVDLKGIGvsgIDADCYVEPAVSVTRKLIDRLGQRDAIPVGKGGSRAVNPFPRSWRRD 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  85 DFFGIDgigDKPEEFPKVErSDFEGEGKHASLALID-ILRENRDATLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNY 163
Cdd:cd02647  83 AAFSVD---HLPILNERYT-VETPLAEETAQLVLIEkIKASLEPVTLLVTGPLTNLARALDSDPDISSNIEEVYIMGGGV 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 17565698 164 YAVGNV-----DGgsSAEYNFHGDPEAASIVLRRmKCPITIVPWEA 204
Cdd:cd02647 159 DAPGNVftppsNG--TAEFNIFWDPLAAKTVFDS-GLKITLVPLDA 201
nuc_hydro_2 cd02652
NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial ...
8-208 3.37e-11

NH_2: A subgroup of nucleoside hydrolases. This group contains eukaryotic and bacterial proteins similar to nucleoside hydrolases. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. These enzymes vary in their substrate specificity.


Pssm-ID: 239118 [Multi-domain]  Cd Length: 293  Bit Score: 62.90  E-value: 3.37e-11
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   8 LVIDSD--GVSDDVRAISLALQHPKAEILAFTAVHGCVTVDQACANIKRtirANDRSNIPVykGAAKSILslPKDDTVSD 85
Cdd:cd02652   1 LILDTDigGDPDDALALALAHALQKCDLLAVTITLADASARRAIDAVNR---FYGRGDIPI--GADYHGW--PEDAKDHA 73
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698  86 FFGIDGIGDKPeefpKVERSDfegEGKHASLALIDILRENRDA--TLVTIGPLTNVAIALQLCEEFSTYP-------SRL 156
Cdd:cd02652  74 KFLLEGDRLHH----DLESAE---DALDAVKALRRLLASAEDAsvTIVSIGPLTNLAALLDADADPLTGPelvrqkvKRL 146
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|...
gi 17565698 157 VIMGG-NYYAVGNVdggSSAEYNFHGDPEAASIVLRRMKCPITIVPWEAFYFE 208
Cdd:cd02652 147 VVMGGaFYDPDGNV---QHREYNFVTDPKAAQRVAGRAQHLGIPVRIVWSGYE 196
PTZ00313 PTZ00313
inosine-adenosine-guanosine-nucleoside hydrolase; Provisional
8-196 1.49e-07

inosine-adenosine-guanosine-nucleoside hydrolase; Provisional


Pssm-ID: 140334 [Multi-domain]  Cd Length: 326  Bit Score: 52.17  E-value: 1.49e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698    8 LVIDSDGVSDDVRAISLALQHPKAeilafTAVHGCVTVDQACA-----NIKRTIRA--NDRSN---IPVYKGAAKSILSL 77
Cdd:PTZ00313   5 VILDHDGNHDDLVALALLLGNPEK-----VKVIGCICTDADCFvddafNVTGKLMCmmHAREAtplFPIGKSSFKGVNPF 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 17565698   78 PKDDTVS----DFFGIDGIGDKPEEFPKV--ERSDFEGEGKHASLalidILRENRDATLVTIGPLTNVAIAL-QLCEEFS 150
Cdd:PTZ00313  80 PSEWRWSaknmDDLPCLNIPEHVAIWEKLkpENEALVGEELLADL----VMSSPEKVTICVTGPLSNVAWCIeKYGEEFT 155
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 17565698  151 TYPSRLVIMGGNYYAVGNV-----DGgsSAEYNFHGDPEAASIVLrrmKCP 196
Cdd:PTZ00313 156 KKVEECVIMGGAVDVGGNVflpgtDG--SAEWNIYWDPPAAKTVL---MCP 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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