NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|19113750|ref|NP_592838|]
View 

chitin synthase I [Schizosaccharomyces pombe]

Protein Classification

chitin synthase family protein( domain architecture ID 12091427)

chitin synthase family protein similar to chitin synthase that polymerizes chitin, a structural polymer of the cell wall and septum, by transferring the sugar moiety of UDP-GlcNAc to the non-reducing end of the growing chitin polymer

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Chitin_synth_1 pfam01644
Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. ...
196-358 6.94e-119

Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases.


:

Pssm-ID: 426363  Cd Length: 163  Bit Score: 356.87  E-value: 6.94e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   196 MYNEDEVLFARTMHSVMKNISHLCTRKNSQVWGKDAWKKVVVCIISDGRTKIHPRTLAYLAAIGVYQDGIAKNQVNDKEV 275
Cdd:pfam01644   1 MYNEDEILLARTLHGVMKNIAHLCSRKRSKTWGPDGWKKVVVCIVSDGRNKINPRTLDLLAALGVYQEGIAKNDVNGKPV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   276 KAHIYEYTTQLSIDPNLKFKGSDRGIVPVQMIFCLKEKNQKKLNSHLWFFQAFCPILKPEVCILLDAGTRPGDQSIYHLW 355
Cdd:pfam01644  81 TAHLFEYTTQLSVDEDLKFKGNEKGIVPVQIIFCLKEKNAKKINSHRWFFNAFGPLLQPNVCVLLDVGTKPGPTSIYHLW 160

                  ...
gi 19113750   356 KSF 358
Cdd:pfam01644 161 KAF 163
Chitin_synth_1N pfam08407
Chitin synthase N-terminal; This is the N-terminal domain of Chitin synthase (pfam01644).
125-195 1.10e-31

Chitin synthase N-terminal; This is the N-terminal domain of Chitin synthase (pfam01644).


:

Pssm-ID: 462467  Cd Length: 70  Bit Score: 117.95  E-value: 1.10e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 19113750   125 RVKLFHGNLILDCPIPKKLLVTLPQQ-TEREFAYMRYSAATCDPQDFSKSLFTLRQPLFfqPRKTEICIAIT 195
Cdd:pfam08407   1 KVKLTNGNLVLDCPVPSRLLNALPRRkGSREFTHMRYTAVTCDPDDFTKNGYTLRQALY--GRETELFIVIT 70
Chitin_synth_2 super family cl37687
Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They ...
335-507 7.19e-14

Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They catalyze chitin synthesis as follows: UDP-N-acetyl-D-glucosamine + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N) <=> UDP + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N+1).


The actual alignment was detected with superfamily member pfam03142:

Pssm-ID: 367353 [Multi-domain]  Cd Length: 527  Bit Score: 75.18  E-value: 7.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   335 EVCILLDAGTRPGDQSIYHLWKSFDLNPQVAGACGEIvvmkgKLGSGLINPLVATQNFEYKMSNILDKPVESVFGFISVL 414
Cdd:pfam03142 203 EYVLMVDADTKVFPDSLTRMVACMVDDPEIMGLCGET-----KIANKRQSWVTAIQVFEYYISHHLSKAFESVFGGVTCL 277
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   415 PGAFSAYRFEALQNDSQGNGPL-------ASYFKGELQNTGKSGIfeanMYLAEDRILCfELVSKKNEAWILHYVKSAYA 487
Cdd:pfam03142 278 PGCFSMYRIKAPKGGDGYWVPIlaspdivEHYSENVVDTLHKKNL----LLLGEDRYLT-TLMLKTFPKRKTVFVPQAVC 352
                         170       180
                  ....*....|....*....|
gi 19113750   488 DTDVPDRIPEFVLQRRRWLN 507
Cdd:pfam03142 353 KTIAPDTFKVLLSQRRRWIN 372
 
Name Accession Description Interval E-value
Chitin_synth_1 pfam01644
Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. ...
196-358 6.94e-119

Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases.


Pssm-ID: 426363  Cd Length: 163  Bit Score: 356.87  E-value: 6.94e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   196 MYNEDEVLFARTMHSVMKNISHLCTRKNSQVWGKDAWKKVVVCIISDGRTKIHPRTLAYLAAIGVYQDGIAKNQVNDKEV 275
Cdd:pfam01644   1 MYNEDEILLARTLHGVMKNIAHLCSRKRSKTWGPDGWKKVVVCIVSDGRNKINPRTLDLLAALGVYQEGIAKNDVNGKPV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   276 KAHIYEYTTQLSIDPNLKFKGSDRGIVPVQMIFCLKEKNQKKLNSHLWFFQAFCPILKPEVCILLDAGTRPGDQSIYHLW 355
Cdd:pfam01644  81 TAHLFEYTTQLSVDEDLKFKGNEKGIVPVQIIFCLKEKNAKKINSHRWFFNAFGPLLQPNVCVLLDVGTKPGPTSIYHLW 160

                  ...
gi 19113750   356 KSF 358
Cdd:pfam01644 161 KAF 163
Chitin_synth_C cd04190
C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate ...
192-512 3.05e-107

C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin; Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.


Pssm-ID: 133033 [Multi-domain]  Cd Length: 244  Bit Score: 330.04  E-value: 3.05e-107
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 192 IAITMYNEDEVLFARTMHSVMKNISHLCTRknsqvwGKDAWKKVVVCIISDGRTKihprtlaylaaigvyqdgiaknqvn 271
Cdd:cd04190   1 VCVTMYNEDEEELARTLDSILKNDYPFCAR------GGDSWKKIVVCVIFDGAIK------------------------- 49
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 272 dkevkahiyeyttqlsidpnlkfkgsdrgivpvqmifclkeKNQKKLNSHLWFFQAFCPIL---KPEVCILLDAGTRPGD 348
Cdd:cd04190  50 -----------------------------------------KNRGKRDSQLWFFNYFCRVLfpdDPEFILLVDADTKFDP 88
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 349 QSIYHLWKSFDLNPQVAGACGEIVVMKGKLgsgliNPLVATQNFEYKMSNILDKPVESVFGFISVLPGAFSAYRFEALQN 428
Cdd:cd04190  89 DSIVQLYKAMDKDPEIGGVCGEIHPMGKKQ-----GPLVMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEALKG 163
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 429 DSQGNGPLASYfkGELQNTGKSGIFEANMYLAEDRILCFELVSKKNEAWILhYVKSAYADTDVPDRIPEFVLQRRRWLNG 508
Cdd:cd04190 164 DNGGKGPLLDY--AYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRKYL-YVPGAVAETDVPETFVELLSQRRRWINS 240

                ....
gi 19113750 509 SFFA 512
Cdd:cd04190 241 TIAN 244
Chitin_synth_1N pfam08407
Chitin synthase N-terminal; This is the N-terminal domain of Chitin synthase (pfam01644).
125-195 1.10e-31

Chitin synthase N-terminal; This is the N-terminal domain of Chitin synthase (pfam01644).


Pssm-ID: 462467  Cd Length: 70  Bit Score: 117.95  E-value: 1.10e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 19113750   125 RVKLFHGNLILDCPIPKKLLVTLPQQ-TEREFAYMRYSAATCDPQDFSKSLFTLRQPLFfqPRKTEICIAIT 195
Cdd:pfam08407   1 KVKLTNGNLVLDCPVPSRLLNALPRRkGSREFTHMRYTAVTCDPDDFTKNGYTLRQALY--GRETELFIVIT 70
Chitin_synth_2 pfam03142
Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They ...
335-507 7.19e-14

Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They catalyze chitin synthesis as follows: UDP-N-acetyl-D-glucosamine + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N) <=> UDP + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N+1).


Pssm-ID: 367353 [Multi-domain]  Cd Length: 527  Bit Score: 75.18  E-value: 7.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   335 EVCILLDAGTRPGDQSIYHLWKSFDLNPQVAGACGEIvvmkgKLGSGLINPLVATQNFEYKMSNILDKPVESVFGFISVL 414
Cdd:pfam03142 203 EYVLMVDADTKVFPDSLTRMVACMVDDPEIMGLCGET-----KIANKRQSWVTAIQVFEYYISHHLSKAFESVFGGVTCL 277
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   415 PGAFSAYRFEALQNDSQGNGPL-------ASYFKGELQNTGKSGIfeanMYLAEDRILCfELVSKKNEAWILHYVKSAYA 487
Cdd:pfam03142 278 PGCFSMYRIKAPKGGDGYWVPIlaspdivEHYSENVVDTLHKKNL----LLLGEDRYLT-TLMLKTFPKRKTVFVPQAVC 352
                         170       180
                  ....*....|....*....|
gi 19113750   488 DTDVPDRIPEFVLQRRRWLN 507
Cdd:pfam03142 353 KTIAPDTFKVLLSQRRRWIN 372
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
414-600 3.57e-09

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 58.98  E-value: 3.57e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 414 LPGAFSAYRFEALQndsqgngplasyfkgelqntgKSGIFEANMyLAEDRILCFELVSKKneaWILHYVKSAYADTDVPD 493
Cdd:COG1215 143 ASGANLAFRREALE---------------------EVGGFDEDT-LGEDLDLSLRLLRAG---YRIVYVPDAVVYEEAPE 197
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 494 RIPEFVLQRRRWLNGsffaaayaicHYYRFFRTSHTISRKFMLSIeFIYQLATIVFGWFNIGNFFIIFYILTSSLASTSA 573
Cdd:COG1215 198 TLRALFRQRRRWARG----------GLQLLLKHRPLLRPRRLLLF-LLLLLLPLLLLLLLLALLALLLLLLPALLLALLL 266
                       170       180
                ....*....|....*....|....*..
gi 19113750 574 NFLPGEILFRIAIWIYASLLVTCFVLA 600
Cdd:COG1215 267 ALRRRRLLLPLLHLLYGLLLLLAALRG 293
 
Name Accession Description Interval E-value
Chitin_synth_1 pfam01644
Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. ...
196-358 6.94e-119

Chitin synthase; This region is found commonly in chitin synthases classes I, II and III. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases.


Pssm-ID: 426363  Cd Length: 163  Bit Score: 356.87  E-value: 6.94e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   196 MYNEDEVLFARTMHSVMKNISHLCTRKNSQVWGKDAWKKVVVCIISDGRTKIHPRTLAYLAAIGVYQDGIAKNQVNDKEV 275
Cdd:pfam01644   1 MYNEDEILLARTLHGVMKNIAHLCSRKRSKTWGPDGWKKVVVCIVSDGRNKINPRTLDLLAALGVYQEGIAKNDVNGKPV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   276 KAHIYEYTTQLSIDPNLKFKGSDRGIVPVQMIFCLKEKNQKKLNSHLWFFQAFCPILKPEVCILLDAGTRPGDQSIYHLW 355
Cdd:pfam01644  81 TAHLFEYTTQLSVDEDLKFKGNEKGIVPVQIIFCLKEKNAKKINSHRWFFNAFGPLLQPNVCVLLDVGTKPGPTSIYHLW 160

                  ...
gi 19113750   356 KSF 358
Cdd:pfam01644 161 KAF 163
Chitin_synth_C cd04190
C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate ...
192-512 3.05e-107

C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin; Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.


Pssm-ID: 133033 [Multi-domain]  Cd Length: 244  Bit Score: 330.04  E-value: 3.05e-107
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 192 IAITMYNEDEVLFARTMHSVMKNISHLCTRknsqvwGKDAWKKVVVCIISDGRTKihprtlaylaaigvyqdgiaknqvn 271
Cdd:cd04190   1 VCVTMYNEDEEELARTLDSILKNDYPFCAR------GGDSWKKIVVCVIFDGAIK------------------------- 49
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 272 dkevkahiyeyttqlsidpnlkfkgsdrgivpvqmifclkeKNQKKLNSHLWFFQAFCPIL---KPEVCILLDAGTRPGD 348
Cdd:cd04190  50 -----------------------------------------KNRGKRDSQLWFFNYFCRVLfpdDPEFILLVDADTKFDP 88
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 349 QSIYHLWKSFDLNPQVAGACGEIVVMKGKLgsgliNPLVATQNFEYKMSNILDKPVESVFGFISVLPGAFSAYRFEALQN 428
Cdd:cd04190  89 DSIVQLYKAMDKDPEIGGVCGEIHPMGKKQ-----GPLVMYQVFEYAISHWLDKAFESVFGFVTCLPGCFSMYRIEALKG 163
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 429 DSQGNGPLASYfkGELQNTGKSGIFEANMYLAEDRILCFELVSKKNEAWILhYVKSAYADTDVPDRIPEFVLQRRRWLNG 508
Cdd:cd04190 164 DNGGKGPLLDY--AYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRKYL-YVPGAVAETDVPETFVELLSQRRRWINS 240

                ....
gi 19113750 509 SFFA 512
Cdd:cd04190 241 TIAN 244
Chitin_synth_1N pfam08407
Chitin synthase N-terminal; This is the N-terminal domain of Chitin synthase (pfam01644).
125-195 1.10e-31

Chitin synthase N-terminal; This is the N-terminal domain of Chitin synthase (pfam01644).


Pssm-ID: 462467  Cd Length: 70  Bit Score: 117.95  E-value: 1.10e-31
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 19113750   125 RVKLFHGNLILDCPIPKKLLVTLPQQ-TEREFAYMRYSAATCDPQDFSKSLFTLRQPLFfqPRKTEICIAIT 195
Cdd:pfam08407   1 KVKLTNGNLVLDCPVPSRLLNALPRRkGSREFTHMRYTAVTCDPDDFTKNGYTLRQALY--GRETELFIVIT 70
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
192-426 2.55e-23

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 97.68  E-value: 2.55e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 192 IAITMYNEDEVLfARTMHSVMKNIshlctrknsqvwgkdaWKKVVVCIISDGRTkihPRTLAYLAAIGvyqdgiaknqvn 271
Cdd:cd06423   1 IIVPAYNEEAVI-ERTIESLLALD----------------YPKLEVIVVDDGST---DDTLEILEELA------------ 48
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 272 dkevkahiyeyttqlsidpnlkfkgsdrGIVPVQMIFCLKEKNQKK---LNshlwffqAFCPILKPEVCILLDAGTRPGD 348
Cdd:cd06423  49 ----------------------------ALYIRRVLVVRDKENGGKagaLN-------AGLRHAKGDIVVVLDADTILEP 93
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 19113750 349 QSIYHLWKSFDLNPQVAGACGEIVVMKGKlgsglINPLVATQNFEYKMSNILDKPVESVFGFISVLPGAFSAYRFEAL 426
Cdd:cd06423  94 DALKRLVVPFFADPKVGAVQGRVRVRNGS-----ENLLTRLQAIEYLSIFRLGRRAQSALGGVLVLSGAFGAFRREAL 166
Chitin_synth_2 pfam03142
Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They ...
335-507 7.19e-14

Chitin synthase; Members of this family are fungal chitin synthase EC:2.4.1.16 enzymes. They catalyze chitin synthesis as follows: UDP-N-acetyl-D-glucosamine + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N) <=> UDP + {(1,4)-(N-acetyl-beta-D-glucosaminyl)}(N+1).


Pssm-ID: 367353 [Multi-domain]  Cd Length: 527  Bit Score: 75.18  E-value: 7.19e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   335 EVCILLDAGTRPGDQSIYHLWKSFDLNPQVAGACGEIvvmkgKLGSGLINPLVATQNFEYKMSNILDKPVESVFGFISVL 414
Cdd:pfam03142 203 EYVLMVDADTKVFPDSLTRMVACMVDDPEIMGLCGET-----KIANKRQSWVTAIQVFEYYISHHLSKAFESVFGGVTCL 277
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750   415 PGAFSAYRFEALQNDSQGNGPL-------ASYFKGELQNTGKSGIfeanMYLAEDRILCfELVSKKNEAWILHYVKSAYA 487
Cdd:pfam03142 278 PGCFSMYRIKAPKGGDGYWVPIlaspdivEHYSENVVDTLHKKNL----LLLGEDRYLT-TLMLKTFPKRKTVFVPQAVC 352
                         170       180
                  ....*....|....*....|
gi 19113750   488 DTDVPDRIPEFVLQRRRWLN 507
Cdd:pfam03142 353 KTIAPDTFKVLLSQRRRWIN 372
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
414-600 3.57e-09

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 58.98  E-value: 3.57e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 414 LPGAFSAYRFEALQndsqgngplasyfkgelqntgKSGIFEANMyLAEDRILCFELVSKKneaWILHYVKSAYADTDVPD 493
Cdd:COG1215 143 ASGANLAFRREALE---------------------EVGGFDEDT-LGEDLDLSLRLLRAG---YRIVYVPDAVVYEEAPE 197
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19113750 494 RIPEFVLQRRRWLNGsffaaayaicHYYRFFRTSHTISRKFMLSIeFIYQLATIVFGWFNIGNFFIIFYILTSSLASTSA 573
Cdd:COG1215 198 TLRALFRQRRRWARG----------GLQLLLKHRPLLRPRRLLLF-LLLLLLPLLLLLLLLALLALLLLLLPALLLALLL 266
                       170       180
                ....*....|....*....|....*..
gi 19113750 574 NFLPGEILFRIAIWIYASLLVTCFVLA 600
Cdd:COG1215 267 ALRRRRLLLPLLHLLYGLLLLLAALRG 293
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH