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Conserved domains on  [gi|19112813|ref|NP_596021|]
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target of rapamycin complex 2 subunit ste20 [Schizosaccharomyces pombe]

Protein Classification

RICTOR family protein( domain architecture ID 10209961)

RICTOR (rapamycin-insensitive companion of mTOR) family protein similar to Schizosaccharomyces pombe target of rapamycin complex 2 subunit ste20 is a component of TORC2, which regulates multiple cellular processes to control cell growth in response to environmental signals

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RICTOR_N pfam14664
Rapamycin-insensitive companion of mTOR, N-term; Rictor appears to serve as a scaffolding ...
235-612 1.89e-106

Rapamycin-insensitive companion of mTOR, N-term; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the N-terminal conserved section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


:

Pssm-ID: 464246  Cd Length: 372  Bit Score: 341.44  E-value: 1.89e-106
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    235 DSSNNLCEYLHEHSDPAYAKNFSLITPTILSMLELNVSEVTASVYRLLRHLFLDATAFSCCQMLNLPWILSKSLLSGTDa 314
Cdd:pfam14664    1 EKANDLVDLLKRHPTLKYDLVLSDFLLRIQPMLLSESKEVRAAGYRILRYLISDEESLQLLRKLHLDIFIIRSLSKDNK- 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    315 YQIEREQAFRLIRTlyFLSSTEGHEDYLSGITRTIISICEHVSDVSRGIAVETLIELMIIRPKILFKANGLRVLMISLID 394
Cdd:pfam14664   80 NEVEREQALKLIRA--FLEIKDGVSEISRGVVRALVAIAEHEDDRLRRICLETLCELALLDPELVVRCGGLRVLLDALLE 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    395 GS--ISEnlaaSAALALVYLLDDPESACYVNLPYDIGILLSPFTSSSSRDTFNSSEEQSeqaakaMKSSAKVASVLLNSW 472
Cdd:pfam14664  158 GSfeLAE----SLLGALLYLLDSPRTRKYLRPGFDLEVLLSPFTDSLDANTKGDSNEER------LQASAKAISSLLKSW 227
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    473 SGLLALSTNDFQALRSIVDTLRVPSFAPRSDVIDLFFLIFQVEYSSWSESFLA------GKRLTVVKNQAVSNDDNINMV 546
Cdd:pfam14664  228 PGLMYLSMNDFRPLRSLVDSLRLPSLEVREAILDLLFDLLRIKPPSWTSSFLAlttygrVANLDSWSLSEGFVAAEFKSI 307
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19112813    547 NIPDGSNKKyMSLRQHFTAVLLFIFLELGLVESIVCMIRASDDPSASRKATYLLGEVLRLSDELLP 612
Cdd:pfam14664  308 LPSESSFSR-ENLVNHYLALLLLVFIEAGLLEALVEVIEESSDSSLSRKATLLLGELLHLANRLLP 372
RICTOR_M pfam14666
Rapamycin-insensitive companion of mTOR, middle domain; Rictor appears to serve as a ...
818-917 8.58e-39

Rapamycin-insensitive companion of mTOR, middle domain; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the more conserved central section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


:

Pssm-ID: 464248  Cd Length: 104  Bit Score: 139.91  E-value: 8.58e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    818 VSEPIFSNSRLQKTLTHGYFPMLKVLSSQKEGHAIMERWRIFTTLYHLTELRNRDDLIIIFLTNLDYRLEGHTRIIFSKA 897
Cdd:pfam14666    5 AGDPLFSKQRLETTLSRGYFLFIGVLSSSKNGLKLLEKWNIFTILYHIVELKSRDDLLKLILSSLDYSLDGHPRIILSKA 84
                           90       100
                   ....*....|....*....|
gi 19112813    898 LNTGQQAVRLTATKHLAALI 917
Cdd:pfam14666   85 LTSSSESIRLYATKHLRVLL 104
RasGEF_N_2 pfam14663
Rapamycin-insensitive companion of mTOR RasGEF_N domain; Rictor appears to serve as a ...
926-1024 2.98e-37

Rapamycin-insensitive companion of mTOR RasGEF_N domain; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the more conserved central section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


:

Pssm-ID: 464245  Cd Length: 107  Bit Score: 135.79  E-value: 2.98e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    926 LNHWAISLLIFQLYDPCLEVCKTAVKVLNEVCARNENLLAqVVQLQPSLAHLGEIGSPLLLRFLATTVGFHYLSEINFIE 1005
Cdd:pfam14663    1 FEEWGIELLVTQLYDPSPEVVAAAVDVLYEACDDKENLES-LVSLRPSLDHLGEIGSPLLLRFLSTPSGFKYLNELGFVE 79
                           90
                   ....*....|....*....
gi 19112813   1006 HELDNWYHHRNIDYVDLLE 1024
Cdd:pfam14663   80 NELDKWFEERNLEYVLKVE 98
RICTOR_V pfam14668
Rapamycin-insensitive companion of mTOR, domain 5; Rictor appears to serve as a scaffolding ...
1095-1165 1.19e-29

Rapamycin-insensitive companion of mTOR, domain 5; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. These long eukaryotic proteins carry several well-conserved domains, and this is No.5.


:

Pssm-ID: 464249  Cd Length: 71  Bit Score: 112.55  E-value: 1.19e-29
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 19112813   1095 RQLKSALWAIGNIGKTDQGITFLINHDTIPLIVKYAENSLIPTVRGTAYFVLGLISRTSKGVEILESLHWY 1165
Cdd:pfam14668    1 LKLKAALWAIGHIGSSPLGIQLLEEYDIVEDIVKIAEESPVLSLRGTAFYVLGLISSTEEGAEILDELGWE 71
HR1 super family cl00087
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small ...
34-108 6.08e-26

Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases; The HR1 domain, also called the ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. It is found in Rho effector proteins including PKC-related kinases such as vertebrate PRK1 (or PKN) and yeast PKC1 protein kinases C, as well as in rhophilins and Rho-associated kinase (ROCK). Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 domains may occur in repeat arrangements (PKN contains three HR1 domains), separated by a short linker region.


The actual alignment was detected with superfamily member cd11627:

Pssm-ID: 469609 [Multi-domain]  Cd Length: 71  Bit Score: 102.07  E-value: 6.08e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19112813   34 SKRLKLLEDLKGKLEVECKIRDGAETLLQVFDTNFKKEtkerKEMLKKKCTDELESSKKKIEELVSSIESFQGEN 108
Cdd:cd11627    1 LVSEQRLEELRGKLEIETKIKDGAENLLQVLDSKNAKE----KKDQRARVESELNSSNRKIAQLTSQLEEEIQRN 71
 
Name Accession Description Interval E-value
RICTOR_N pfam14664
Rapamycin-insensitive companion of mTOR, N-term; Rictor appears to serve as a scaffolding ...
235-612 1.89e-106

Rapamycin-insensitive companion of mTOR, N-term; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the N-terminal conserved section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


Pssm-ID: 464246  Cd Length: 372  Bit Score: 341.44  E-value: 1.89e-106
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    235 DSSNNLCEYLHEHSDPAYAKNFSLITPTILSMLELNVSEVTASVYRLLRHLFLDATAFSCCQMLNLPWILSKSLLSGTDa 314
Cdd:pfam14664    1 EKANDLVDLLKRHPTLKYDLVLSDFLLRIQPMLLSESKEVRAAGYRILRYLISDEESLQLLRKLHLDIFIIRSLSKDNK- 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    315 YQIEREQAFRLIRTlyFLSSTEGHEDYLSGITRTIISICEHVSDVSRGIAVETLIELMIIRPKILFKANGLRVLMISLID 394
Cdd:pfam14664   80 NEVEREQALKLIRA--FLEIKDGVSEISRGVVRALVAIAEHEDDRLRRICLETLCELALLDPELVVRCGGLRVLLDALLE 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    395 GS--ISEnlaaSAALALVYLLDDPESACYVNLPYDIGILLSPFTSSSSRDTFNSSEEQSeqaakaMKSSAKVASVLLNSW 472
Cdd:pfam14664  158 GSfeLAE----SLLGALLYLLDSPRTRKYLRPGFDLEVLLSPFTDSLDANTKGDSNEER------LQASAKAISSLLKSW 227
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    473 SGLLALSTNDFQALRSIVDTLRVPSFAPRSDVIDLFFLIFQVEYSSWSESFLA------GKRLTVVKNQAVSNDDNINMV 546
Cdd:pfam14664  228 PGLMYLSMNDFRPLRSLVDSLRLPSLEVREAILDLLFDLLRIKPPSWTSSFLAlttygrVANLDSWSLSEGFVAAEFKSI 307
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19112813    547 NIPDGSNKKyMSLRQHFTAVLLFIFLELGLVESIVCMIRASDDPSASRKATYLLGEVLRLSDELLP 612
Cdd:pfam14664  308 LPSESSFSR-ENLVNHYLALLLLVFIEAGLLEALVEVIEESSDSSLSRKATLLLGELLHLANRLLP 372
RICTOR_M pfam14666
Rapamycin-insensitive companion of mTOR, middle domain; Rictor appears to serve as a ...
818-917 8.58e-39

Rapamycin-insensitive companion of mTOR, middle domain; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the more conserved central section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


Pssm-ID: 464248  Cd Length: 104  Bit Score: 139.91  E-value: 8.58e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    818 VSEPIFSNSRLQKTLTHGYFPMLKVLSSQKEGHAIMERWRIFTTLYHLTELRNRDDLIIIFLTNLDYRLEGHTRIIFSKA 897
Cdd:pfam14666    5 AGDPLFSKQRLETTLSRGYFLFIGVLSSSKNGLKLLEKWNIFTILYHIVELKSRDDLLKLILSSLDYSLDGHPRIILSKA 84
                           90       100
                   ....*....|....*....|
gi 19112813    898 LNTGQQAVRLTATKHLAALI 917
Cdd:pfam14666   85 LTSSSESIRLYATKHLRVLL 104
RasGEF_N_2 pfam14663
Rapamycin-insensitive companion of mTOR RasGEF_N domain; Rictor appears to serve as a ...
926-1024 2.98e-37

Rapamycin-insensitive companion of mTOR RasGEF_N domain; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the more conserved central section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


Pssm-ID: 464245  Cd Length: 107  Bit Score: 135.79  E-value: 2.98e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    926 LNHWAISLLIFQLYDPCLEVCKTAVKVLNEVCARNENLLAqVVQLQPSLAHLGEIGSPLLLRFLATTVGFHYLSEINFIE 1005
Cdd:pfam14663    1 FEEWGIELLVTQLYDPSPEVVAAAVDVLYEACDDKENLES-LVSLRPSLDHLGEIGSPLLLRFLSTPSGFKYLNELGFVE 79
                           90
                   ....*....|....*....
gi 19112813   1006 HELDNWYHHRNIDYVDLLE 1024
Cdd:pfam14663   80 NELDKWFEERNLEYVLKVE 98
RICTOR_V pfam14668
Rapamycin-insensitive companion of mTOR, domain 5; Rictor appears to serve as a scaffolding ...
1095-1165 1.19e-29

Rapamycin-insensitive companion of mTOR, domain 5; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. These long eukaryotic proteins carry several well-conserved domains, and this is No.5.


Pssm-ID: 464249  Cd Length: 71  Bit Score: 112.55  E-value: 1.19e-29
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 19112813   1095 RQLKSALWAIGNIGKTDQGITFLINHDTIPLIVKYAENSLIPTVRGTAYFVLGLISRTSKGVEILESLHWY 1165
Cdd:pfam14668    1 LKLKAALWAIGHIGSSPLGIQLLEEYDIVEDIVKIAEESPVLSLRGTAFYVLGLISSTEEGAEILDELGWE 71
HR1_Ste20-like cd11627
Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of ...
34-108 6.08e-26

Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Schizosaccharomyces pombe Ste20-like proteins; This group is composed of predominantly uncharacterized fungal proteins, which contain two known domains: HR1 at the N-terminal region and REM (Ras exchanger motif) at the C-terminal region. One member protein from Schizosaccharomyces pombe is named Ste16 while its gene is called ste20 (a target of rapamycin complex 2 subunit). It is a subunit in the protein kinase TOR complexes in fission yeast. The REM domain is usually found in nucleotide exchange factors for Ras-like small GTPases. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family.


Pssm-ID: 212017 [Multi-domain]  Cd Length: 71  Bit Score: 102.07  E-value: 6.08e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19112813   34 SKRLKLLEDLKGKLEVECKIRDGAETLLQVFDTNFKKEtkerKEMLKKKCTDELESSKKKIEELVSSIESFQGEN 108
Cdd:cd11627    1 LVSEQRLEELRGKLEIETKIKDGAENLLQVLDSKNAKE----KKDQRARVESELNSSNRKIAQLTSQLEEEIQRN 71
Hr1 smart00742
Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical ...
38-102 1.11e-08

Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical domain found in vertebrate PRK1 and yeast PKC1 protein kinases C. The HR1 in rhophilin bind RhoGTP; those in PRK1 bind RhoA and RhoB. Also called RBD - Rho-binding domain


Pssm-ID: 128981  Cd Length: 57  Bit Score: 52.58  E-value: 1.11e-08
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19112813      38 KLLEDLKGKLEVECKIRDGAETLLQVFDTnfkketkerKEMLKKKCTDELESSKKKIEELVSSIE 102
Cdd:smart00742    1 LRLEDLRRKIEKELKVKEGAENMRKLTSN---------DRKVLSEAQSMLRESNQKLDLLKEELE 56
HR1 pfam02185
Hr1 repeat; The HR1 repeat was first described as a three times repeated homology region of ...
40-105 3.32e-07

Hr1 repeat; The HR1 repeat was first described as a three times repeated homology region of the N-terminal non-catalytic part of protein kinase PRK1(PKN). The first two of these repeats were later shown to bind the small G protein rho known to activate PKN in its GTP-bound form. Similar rho-binding domains also occur in a number of other protein kinases and in the rho-binding proteins rhophilin and rhotekin. Recently, the structure of the N-terminal HR1 repeat complexed with RhoA has been determined by X-ray crystallography. It forms an antiparallel coiled-coil fold termed an ACC finger.


Pssm-ID: 460478 [Multi-domain]  Cd Length: 67  Bit Score: 48.67  E-value: 3.32e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19112813     40 LEDLKGKLEVECKIRDGAETLLQVFDTnfkkeTKERKemLKKKCTDELESSKKKIEELVSSIESFQ 105
Cdd:pfam02185    2 LQELRKKIEVEKKIKEGAENMLRLLQA-----TKDRK--VLAEAESELRESNRKIQLLREQLRELQ 60
 
Name Accession Description Interval E-value
RICTOR_N pfam14664
Rapamycin-insensitive companion of mTOR, N-term; Rictor appears to serve as a scaffolding ...
235-612 1.89e-106

Rapamycin-insensitive companion of mTOR, N-term; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the N-terminal conserved section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


Pssm-ID: 464246  Cd Length: 372  Bit Score: 341.44  E-value: 1.89e-106
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    235 DSSNNLCEYLHEHSDPAYAKNFSLITPTILSMLELNVSEVTASVYRLLRHLFLDATAFSCCQMLNLPWILSKSLLSGTDa 314
Cdd:pfam14664    1 EKANDLVDLLKRHPTLKYDLVLSDFLLRIQPMLLSESKEVRAAGYRILRYLISDEESLQLLRKLHLDIFIIRSLSKDNK- 79
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    315 YQIEREQAFRLIRTlyFLSSTEGHEDYLSGITRTIISICEHVSDVSRGIAVETLIELMIIRPKILFKANGLRVLMISLID 394
Cdd:pfam14664   80 NEVEREQALKLIRA--FLEIKDGVSEISRGVVRALVAIAEHEDDRLRRICLETLCELALLDPELVVRCGGLRVLLDALLE 157
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    395 GS--ISEnlaaSAALALVYLLDDPESACYVNLPYDIGILLSPFTSSSSRDTFNSSEEQSeqaakaMKSSAKVASVLLNSW 472
Cdd:pfam14664  158 GSfeLAE----SLLGALLYLLDSPRTRKYLRPGFDLEVLLSPFTDSLDANTKGDSNEER------LQASAKAISSLLKSW 227
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    473 SGLLALSTNDFQALRSIVDTLRVPSFAPRSDVIDLFFLIFQVEYSSWSESFLA------GKRLTVVKNQAVSNDDNINMV 546
Cdd:pfam14664  228 PGLMYLSMNDFRPLRSLVDSLRLPSLEVREAILDLLFDLLRIKPPSWTSSFLAlttygrVANLDSWSLSEGFVAAEFKSI 307
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19112813    547 NIPDGSNKKyMSLRQHFTAVLLFIFLELGLVESIVCMIRASDDPSASRKATYLLGEVLRLSDELLP 612
Cdd:pfam14664  308 LPSESSFSR-ENLVNHYLALLLLVFIEAGLLEALVEVIEESSDSSLSRKATLLLGELLHLANRLLP 372
RICTOR_M pfam14666
Rapamycin-insensitive companion of mTOR, middle domain; Rictor appears to serve as a ...
818-917 8.58e-39

Rapamycin-insensitive companion of mTOR, middle domain; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the more conserved central section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


Pssm-ID: 464248  Cd Length: 104  Bit Score: 139.91  E-value: 8.58e-39
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    818 VSEPIFSNSRLQKTLTHGYFPMLKVLSSQKEGHAIMERWRIFTTLYHLTELRNRDDLIIIFLTNLDYRLEGHTRIIFSKA 897
Cdd:pfam14666    5 AGDPLFSKQRLETTLSRGYFLFIGVLSSSKNGLKLLEKWNIFTILYHIVELKSRDDLLKLILSSLDYSLDGHPRIILSKA 84
                           90       100
                   ....*....|....*....|
gi 19112813    898 LNTGQQAVRLTATKHLAALI 917
Cdd:pfam14666   85 LTSSSESIRLYATKHLRVLL 104
RasGEF_N_2 pfam14663
Rapamycin-insensitive companion of mTOR RasGEF_N domain; Rictor appears to serve as a ...
926-1024 2.98e-37

Rapamycin-insensitive companion of mTOR RasGEF_N domain; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. This region is the more conserved central section that may include several individual domains. Rictor can be inhibited in the short-term by rapamycin.


Pssm-ID: 464245  Cd Length: 107  Bit Score: 135.79  E-value: 2.98e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19112813    926 LNHWAISLLIFQLYDPCLEVCKTAVKVLNEVCARNENLLAqVVQLQPSLAHLGEIGSPLLLRFLATTVGFHYLSEINFIE 1005
Cdd:pfam14663    1 FEEWGIELLVTQLYDPSPEVVAAAVDVLYEACDDKENLES-LVSLRPSLDHLGEIGSPLLLRFLSTPSGFKYLNELGFVE 79
                           90
                   ....*....|....*....
gi 19112813   1006 HELDNWYHHRNIDYVDLLE 1024
Cdd:pfam14663   80 NELDKWFEERNLEYVLKVE 98
RICTOR_V pfam14668
Rapamycin-insensitive companion of mTOR, domain 5; Rictor appears to serve as a scaffolding ...
1095-1165 1.19e-29

Rapamycin-insensitive companion of mTOR, domain 5; Rictor appears to serve as a scaffolding protein that is important for maintaining mTORC2 integrity. The mammalian target of rapamycin (mTOR) is a conserved Ser/Thr kinase that forms two functionally distinct complexes, mTROC1 and mTORC2, important for nutrient and growth-factor signalling. These long eukaryotic proteins carry several well-conserved domains, and this is No.5.


Pssm-ID: 464249  Cd Length: 71  Bit Score: 112.55  E-value: 1.19e-29
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 19112813   1095 RQLKSALWAIGNIGKTDQGITFLINHDTIPLIVKYAENSLIPTVRGTAYFVLGLISRTSKGVEILESLHWY 1165
Cdd:pfam14668    1 LKLKAALWAIGHIGSSPLGIQLLEEYDIVEDIVKIAEESPVLSLRGTAFYVLGLISSTEEGAEILDELGWE 71
HR1_Ste20-like cd11627
Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of ...
34-108 6.08e-26

Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Schizosaccharomyces pombe Ste20-like proteins; This group is composed of predominantly uncharacterized fungal proteins, which contain two known domains: HR1 at the N-terminal region and REM (Ras exchanger motif) at the C-terminal region. One member protein from Schizosaccharomyces pombe is named Ste16 while its gene is called ste20 (a target of rapamycin complex 2 subunit). It is a subunit in the protein kinase TOR complexes in fission yeast. The REM domain is usually found in nucleotide exchange factors for Ras-like small GTPases. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family.


Pssm-ID: 212017 [Multi-domain]  Cd Length: 71  Bit Score: 102.07  E-value: 6.08e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19112813   34 SKRLKLLEDLKGKLEVECKIRDGAETLLQVFDTNFKKEtkerKEMLKKKCTDELESSKKKIEELVSSIESFQGEN 108
Cdd:cd11627    1 LVSEQRLEELRGKLEIETKIKDGAENLLQVLDSKNAKE----KKDQRARVESELNSSNRKIAQLTSQLEEEIQRN 71
HR1 cd00089
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small ...
34-108 1.20e-13

Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases; The HR1 domain, also called the ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. It is found in Rho effector proteins including PKC-related kinases such as vertebrate PRK1 (or PKN) and yeast PKC1 protein kinases C, as well as in rhophilins and Rho-associated kinase (ROCK). Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 domains may occur in repeat arrangements (PKN contains three HR1 domains), separated by a short linker region.


Pssm-ID: 212008 [Multi-domain]  Cd Length: 68  Bit Score: 66.97  E-value: 1.20e-13
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19112813   34 SKRLKLLEDLKGKLEVECKIRDGAETLLQVFDTNFKKetkerkeMLKKKCTDELESSKKKIEELVSSIESFQGEN 108
Cdd:cd00089    1 SKLQQRLEELRRKLEKELKIREGAENLLKLYSNPKVK-------KDLAEVQLNLKESKEKIDLLKRQLERYNALV 68
Hr1 smart00742
Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical ...
38-102 1.11e-08

Rho effector or protein kinase C-related kinase homology region 1 homologues; Alpha-helical domain found in vertebrate PRK1 and yeast PKC1 protein kinases C. The HR1 in rhophilin bind RhoGTP; those in PRK1 bind RhoA and RhoB. Also called RBD - Rho-binding domain


Pssm-ID: 128981  Cd Length: 57  Bit Score: 52.58  E-value: 1.11e-08
                            10        20        30        40        50        60
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 19112813      38 KLLEDLKGKLEVECKIRDGAETLLQVFDTnfkketkerKEMLKKKCTDELESSKKKIEELVSSIE 102
Cdd:smart00742    1 LRLEDLRRKIEKELKVKEGAENMRKLTSN---------DRKVLSEAQSMLRESNQKLDLLKEELE 56
HR1 pfam02185
Hr1 repeat; The HR1 repeat was first described as a three times repeated homology region of ...
40-105 3.32e-07

Hr1 repeat; The HR1 repeat was first described as a three times repeated homology region of the N-terminal non-catalytic part of protein kinase PRK1(PKN). The first two of these repeats were later shown to bind the small G protein rho known to activate PKN in its GTP-bound form. Similar rho-binding domains also occur in a number of other protein kinases and in the rho-binding proteins rhophilin and rhotekin. Recently, the structure of the N-terminal HR1 repeat complexed with RhoA has been determined by X-ray crystallography. It forms an antiparallel coiled-coil fold termed an ACC finger.


Pssm-ID: 460478 [Multi-domain]  Cd Length: 67  Bit Score: 48.67  E-value: 3.32e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 19112813     40 LEDLKGKLEVECKIRDGAETLLQVFDTnfkkeTKERKemLKKKCTDELESSKKKIEELVSSIESFQ 105
Cdd:pfam02185    2 LQELRKKIEVEKKIKEGAENMLRLLQA-----TKDRK--VLAEAESELRESNRKIQLLREQLRELQ 60
Uds1 pfam15456
Up-regulated During Septation; Uds1 is a domain family is found mostly in fungi, and is ...
34-102 4.01e-04

Up-regulated During Septation; Uds1 is a domain family is found mostly in fungi, and is typically between 120 and 138 amino acids in length. The GO annotation for the S.pombe protein describes the protein as barrier septum assembly involved in cell cycle cytokinesis, GO:0071937. Many of the uncharacterized members are listed as being involucrin repeat proteins, but this can not be substantiated.


Pssm-ID: 434730 [Multi-domain]  Cd Length: 119  Bit Score: 41.38  E-value: 4.01e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 19112813     34 SKRLKLLED----LKGKLEVECKIRDGAETLLQVFDTNFKKETKERKEMLKKKCTDELESSKKKIEELVSSIE 102
Cdd:pfam15456   25 KKELRALDSrleyLRRKLALETKLRDAARSLHRLYSSYLRSPRNSKFSESLLKAEEELAESDRKIDELAQELE 97
HR1_PKN_2 cd11623
Second Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ...
30-95 1.91e-03

Second Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N; PKN, also called Protein-kinase C-related kinase (PRK), is a serine/threonine protein kinase that can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytoskeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. In some vertebrates, there are three PKN isoforms from different genes (designated PKN1, PKN2, and PKN3), which show different enzymatic properties, tissue distribution, and varied functions. PKN proteins contain three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the second HR1 domain of PKN. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family.


Pssm-ID: 212013  Cd Length: 71  Bit Score: 37.98  E-value: 1.91e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 19112813   30 NTTDSKrlklLEDLKGKLEVECKIRDGAETLLQVFDTNFKKETK---ERKEMlkkkctdeLESSKKKIE 95
Cdd:cd11623    2 NAQNSR----LAGLEKQLNIELKVKQGAENMIQMYSNGKSKDRKllaEAQQM--------LEDSKAKIE 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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