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Conserved domains on  [gi|20130397|ref|NP_612003|]
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uncharacterized protein Dmel_CG7049 [Drosophila melanogaster]

Protein Classification

formylglycine-generating enzyme family protein( domain architecture ID 10510263)

formylglycine-generating enzyme family protein similar to human sulfatase-modifying factor 1 (SUMF1), which oxidizes a cysteine residue in the substrate sulfatase, to an active site 3-oxoalanine residue, also called C(alpha)-formylglycine

CATH:  3.90.1580.10
Gene Ontology:  GO:0046872
SCOP:  4000450

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
FGE-sulfatase pfam03781
Sulfatase-modifying factor enzyme 1; This domain is found in eukaryotic proteins required for ...
65-334 5.69e-93

Sulfatase-modifying factor enzyme 1; This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.


:

Pssm-ID: 397722 [Multi-domain]  Cd Length: 259  Bit Score: 277.46  E-value: 5.69e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397    65 ADMSLLPGGTVYMGTDkPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVLHTNYTTEAerygdsflfksllspleqk 144
Cdd:pfam03781   3 PDMVLIPGGSFEMGSA-ERTGNDNEAPAHDVTVRPFAIDKYPVTNAQYAAFVEATGYTTEV------------------- 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   145 nledfrvaSAVWWYKVAGVNWRHPNGVDSDIDHLGRHPVVHVSWRDAVEYCKWAGK------RLPSEAEWEAACRGGKER 218
Cdd:pfam03781  63 --------YPQWWAEVEGANWRHPSGGLSDIDDGADHPVTGVSWYDAVAYARWLGKrtgngyRLPTEAEWEYAARGGSKG 134
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   219 KLFPWGNKLMPRNehwlNIWQG-DFPDGNLAEDGFEY-TSPVDAFRQNIYDLHNMVGNVWEWTADLWD-----------V 285
Cdd:pfam03781 135 RRYPWGDELYPAG----NIWQGaDFPNEHAGADSFNGrTSPVGSFPPNALGLYDMAGNVWEWTSDWYKphysfapydelS 210
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 20130397   286 NDVSDNPNRVKKGGSYLCHKsYCYRYRCAAR-SQNTEDSSAGNLGFRCAK 334
Cdd:pfam03781 211 RDNFGGGYRVVRGGSWACSV-YPSRLRPAFRgNCQTPGTRADDVGFRLVR 259
 
Name Accession Description Interval E-value
FGE-sulfatase pfam03781
Sulfatase-modifying factor enzyme 1; This domain is found in eukaryotic proteins required for ...
65-334 5.69e-93

Sulfatase-modifying factor enzyme 1; This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.


Pssm-ID: 397722 [Multi-domain]  Cd Length: 259  Bit Score: 277.46  E-value: 5.69e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397    65 ADMSLLPGGTVYMGTDkPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVLHTNYTTEAerygdsflfksllspleqk 144
Cdd:pfam03781   3 PDMVLIPGGSFEMGSA-ERTGNDNEAPAHDVTVRPFAIDKYPVTNAQYAAFVEATGYTTEV------------------- 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   145 nledfrvaSAVWWYKVAGVNWRHPNGVDSDIDHLGRHPVVHVSWRDAVEYCKWAGK------RLPSEAEWEAACRGGKER 218
Cdd:pfam03781  63 --------YPQWWAEVEGANWRHPSGGLSDIDDGADHPVTGVSWYDAVAYARWLGKrtgngyRLPTEAEWEYAARGGSKG 134
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   219 KLFPWGNKLMPRNehwlNIWQG-DFPDGNLAEDGFEY-TSPVDAFRQNIYDLHNMVGNVWEWTADLWD-----------V 285
Cdd:pfam03781 135 RRYPWGDELYPAG----NIWQGaDFPNEHAGADSFNGrTSPVGSFPPNALGLYDMAGNVWEWTSDWYKphysfapydelS 210
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 20130397   286 NDVSDNPNRVKKGGSYLCHKsYCYRYRCAAR-SQNTEDSSAGNLGFRCAK 334
Cdd:pfam03781 211 RDNFGGGYRVVRGGSWACSV-YPSRLRPAFRgNCQTPGTRADDVGFRLVR 259
YfmG COG1262
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain ...
65-336 6.02e-67

Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440874 [Multi-domain]  Cd Length: 238  Bit Score: 210.24  E-value: 6.02e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397  65 ADMSLLPGGTVYMGTDKPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVlhtnytteaerygdsflfksllspleqk 144
Cdd:COG1262  11 LEMVLIPGGTFLMGSPEGEGAFDNERPRHRVTVSPFYIDKYEVTNAEYRAFV---------------------------- 62
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397 145 nledfrvasavWWykvAGVNWRH-PNGVDSDIDhlgRHPVVHVSWRDAVEYCKWAGK------RLPSEAEWEAACRGGKE 217
Cdd:COG1262  63 -----------GW---TLADGRNnPLYSDFGGP---DHPVVHVSWYDAQAYCRWLGKktgkgyRLPTEAEWEYAARGGDG 125
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397 218 RKlFPWGNKLMPRNEHWLNiwqgdfpdgnlaEDGFEYTSPVDAFRQNIYDLHNMVGNVWEWTADLWDVN---DVSDNP-- 292
Cdd:COG1262 126 RP-YPWGDDLPPELANYAG------------NDGRGSTAPVGSFPPNPFGLYDMAGNVWEWTADWYDPPypgAPADGPvg 192
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 20130397 293 -----NRVKKGGSYLCHKSYCyryRCAARSQNTEDSSAGNLGFRCAKNA 336
Cdd:COG1262 193 penggQRVLRGGSWATPPDHL---RSAYRNFFPPDARWQFVGFRLARDL 238
egtB_TIGR03440 TIGR03440
ergothioneine biosynthesis protein EgtB; Members of this family include EgtB, and enzyme of ...
65-281 3.58e-23

ergothioneine biosynthesis protein EgtB; Members of this family include EgtB, and enzyme of the ergothioneine biosynthesis, as found in numerous Actinobacteria. Characterized homologs to this family include a formylglycine-generating enzyme that serves as a maturase for an aerobic sulfatase (cf. the radical SAM enzymes that serve as anaerobic sulfatase maturases). [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]


Pssm-ID: 274581 [Multi-domain]  Cd Length: 406  Bit Score: 98.94  E-value: 3.58e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397    65 ADMSLLPGGTVYMGTDKPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVlhtnyttEAERYGDSflfkSLLSP---- 140
Cdd:TIGR03440 168 LRWVAFPGGEFEIGSDADGFAFDNERPRHRVLVPPFEIDARPVTNGEYLEFI-------EDGGYRRP----ELWLSdgwa 236
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   141 -LEQKNLEdfrvaSAVWWYKVAGVNWRHPNGVDSDIDHlgRHPVVHVSWRDAVEYCKWAGKRLPSEAEWEAACRGGKErk 219
Cdd:TIGR03440 237 wVQAEGWQ-----APLYWRRDDGTWWVFTLGGLRPLDP--DAPVCHVSYYEADAYARWAGARLPTEAEWEKAARWGDA-- 307
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 20130397   220 lfpwgnklmprnehwlniwqgdfpDGNLAEDGFEytSPVDAFRQNIYDLHNMVGNVWEWTAD 281
Cdd:TIGR03440 308 ------------------------PPNFAEANLG--APVGAYPAGAQGLGQLFGDVWEWTAS 343
SenA NF041186
selenoneine synthase SenA; Selenoneine is the selenium analog of ergothioneine, a ...
70-227 4.23e-17

selenoneine synthase SenA; Selenoneine is the selenium analog of ergothioneine, a sulfur-containing derivative of a hercynine, which derives from histidine by trimethylation of its amino group. SenA, a homolog of ergothioneine biosynthesis protein EgtB, completes selenoneine biosynthesis in a pathway that also requires a SelD protein to prepare selenophosphate, EgtD to prepare hercynine, and the selenosugar-producing glycosyltransferase SenB (TIGR04348). SenA catalyzes selenium-carbon bond formation between hercynine and selenosugar to produce selenoneine. Other enzymes that create carbon-selenium bonds include SelA, involved in selenocysteine biosynthesis, SelU, involved in selenouridine biosynthesis, and SbtM, a radical SAM enzyme involved in post-translational modification of the RiPP precursor SbtA (see PMID:34730336).


Pssm-ID: 469092 [Multi-domain]  Cd Length: 384  Bit Score: 81.39  E-value: 4.23e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   70 LPGGTVYMGTD-KPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVlhtnyttEAERYGDsflfKSLLSPLEQKNLED 148
Cdd:NF041186 173 VPGGTFRLGSDpGPGFAFDNEKWAHPVEVAPFEIDAAPVTNAEFLAFV-------EAGGYRD----PRLWSAAGWAWLAA 241
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397  149 FRVASAVWWYKVAGVNWRHpngvdsdiDHLGR-------HPVVHVSWRDAVEYCKWAGKRLPSEAEWEAACRGGKErklF 221
Cdd:NF041186 242 QGLAAPRYWRRGADGAWQE--------RRFGRwqpldpdAPVVHVSAHEAEAYCRWAGRRLPTEAEWEYAAAGAPG---F 310

                 ....*.
gi 20130397  222 PWGNKL 227
Cdd:NF041186 311 PWGDSV 316
 
Name Accession Description Interval E-value
FGE-sulfatase pfam03781
Sulfatase-modifying factor enzyme 1; This domain is found in eukaryotic proteins required for ...
65-334 5.69e-93

Sulfatase-modifying factor enzyme 1; This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.


Pssm-ID: 397722 [Multi-domain]  Cd Length: 259  Bit Score: 277.46  E-value: 5.69e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397    65 ADMSLLPGGTVYMGTDkPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVLHTNYTTEAerygdsflfksllspleqk 144
Cdd:pfam03781   3 PDMVLIPGGSFEMGSA-ERTGNDNEAPAHDVTVRPFAIDKYPVTNAQYAAFVEATGYTTEV------------------- 62
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   145 nledfrvaSAVWWYKVAGVNWRHPNGVDSDIDHLGRHPVVHVSWRDAVEYCKWAGK------RLPSEAEWEAACRGGKER 218
Cdd:pfam03781  63 --------YPQWWAEVEGANWRHPSGGLSDIDDGADHPVTGVSWYDAVAYARWLGKrtgngyRLPTEAEWEYAARGGSKG 134
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   219 KLFPWGNKLMPRNehwlNIWQG-DFPDGNLAEDGFEY-TSPVDAFRQNIYDLHNMVGNVWEWTADLWD-----------V 285
Cdd:pfam03781 135 RRYPWGDELYPAG----NIWQGaDFPNEHAGADSFNGrTSPVGSFPPNALGLYDMAGNVWEWTSDWYKphysfapydelS 210
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 20130397   286 NDVSDNPNRVKKGGSYLCHKsYCYRYRCAAR-SQNTEDSSAGNLGFRCAK 334
Cdd:pfam03781 211 RDNFGGGYRVVRGGSWACSV-YPSRLRPAFRgNCQTPGTRADDVGFRLVR 259
YfmG COG1262
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain ...
65-336 6.02e-67

Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440874 [Multi-domain]  Cd Length: 238  Bit Score: 210.24  E-value: 6.02e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397  65 ADMSLLPGGTVYMGTDKPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVlhtnytteaerygdsflfksllspleqk 144
Cdd:COG1262  11 LEMVLIPGGTFLMGSPEGEGAFDNERPRHRVTVSPFYIDKYEVTNAEYRAFV---------------------------- 62
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397 145 nledfrvasavWWykvAGVNWRH-PNGVDSDIDhlgRHPVVHVSWRDAVEYCKWAGK------RLPSEAEWEAACRGGKE 217
Cdd:COG1262  63 -----------GW---TLADGRNnPLYSDFGGP---DHPVVHVSWYDAQAYCRWLGKktgkgyRLPTEAEWEYAARGGDG 125
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397 218 RKlFPWGNKLMPRNEHWLNiwqgdfpdgnlaEDGFEYTSPVDAFRQNIYDLHNMVGNVWEWTADLWDVN---DVSDNP-- 292
Cdd:COG1262 126 RP-YPWGDDLPPELANYAG------------NDGRGSTAPVGSFPPNPFGLYDMAGNVWEWTADWYDPPypgAPADGPvg 192
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*....
gi 20130397 293 -----NRVKKGGSYLCHKSYCyryRCAARSQNTEDSSAGNLGFRCAKNA 336
Cdd:COG1262 193 penggQRVLRGGSWATPPDHL---RSAYRNFFPPDARWQFVGFRLARDL 238
egtB_TIGR03440 TIGR03440
ergothioneine biosynthesis protein EgtB; Members of this family include EgtB, and enzyme of ...
65-281 3.58e-23

ergothioneine biosynthesis protein EgtB; Members of this family include EgtB, and enzyme of the ergothioneine biosynthesis, as found in numerous Actinobacteria. Characterized homologs to this family include a formylglycine-generating enzyme that serves as a maturase for an aerobic sulfatase (cf. the radical SAM enzymes that serve as anaerobic sulfatase maturases). [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]


Pssm-ID: 274581 [Multi-domain]  Cd Length: 406  Bit Score: 98.94  E-value: 3.58e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397    65 ADMSLLPGGTVYMGTDKPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVlhtnyttEAERYGDSflfkSLLSP---- 140
Cdd:TIGR03440 168 LRWVAFPGGEFEIGSDADGFAFDNERPRHRVLVPPFEIDARPVTNGEYLEFI-------EDGGYRRP----ELWLSdgwa 236
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   141 -LEQKNLEdfrvaSAVWWYKVAGVNWRHPNGVDSDIDHlgRHPVVHVSWRDAVEYCKWAGKRLPSEAEWEAACRGGKErk 219
Cdd:TIGR03440 237 wVQAEGWQ-----APLYWRRDDGTWWVFTLGGLRPLDP--DAPVCHVSYYEADAYARWAGARLPTEAEWEKAARWGDA-- 307
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 20130397   220 lfpwgnklmprnehwlniwqgdfpDGNLAEDGFEytSPVDAFRQNIYDLHNMVGNVWEWTAD 281
Cdd:TIGR03440 308 ------------------------PPNFAEANLG--APVGAYPAGAQGLGQLFGDVWEWTAS 343
GldK TIGR03525
gliding motility-associated lipoprotein GldK; Members of this protein family are exclusive to ...
179-331 1.74e-21

gliding motility-associated lipoprotein GldK; Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldK is a lipoprotein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae. Knockouts of GldK abolish the gliding phenotype. GldK is homologous to GldJ. There is a GldK homolog in Cytophaga hutchinsonii and several other species that has a different, shorter architecture and is represented by a separate model. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.


Pssm-ID: 274629  Cd Length: 450  Bit Score: 94.54  E-value: 1.74e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   179 GRHPVVHVSWRDAVEYCKWAGK-----------------RLPSEAEWEAACRGGKERKLFPWGNklmPRNEHWLNIWQGD 241
Cdd:TIGR03525 262 DDYPVVGVTWKQARAFCNWRTKykndfrkkkgpanvntfRLPTEAEWEYAARGGLEGATYPWGG---PYTKNDRGCFMAN 338
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   242 FPD--GNLAEDGFEYTSPVDAFRQNIYDLHNMVGNVWEWTADLWD-------------VNDvSDNPNRVKKGGSYlchKS 306
Cdd:TIGR03525 339 FKPvrGDYAADEALYTVEAKSYEPNDYGLYNMAGNVSEWTNSSYDpssyeymstmnpnVND-SENTRKVVRGGSW---KD 414
                         170       180
                  ....*....|....*....|....*
gi 20130397   307 YCYRYRCAARSQNTEDSSAGNLGFR 331
Cdd:TIGR03525 415 VAYFLQVSTRDYEYADSARSYIGFR 439
SenA NF041186
selenoneine synthase SenA; Selenoneine is the selenium analog of ergothioneine, a ...
70-227 4.23e-17

selenoneine synthase SenA; Selenoneine is the selenium analog of ergothioneine, a sulfur-containing derivative of a hercynine, which derives from histidine by trimethylation of its amino group. SenA, a homolog of ergothioneine biosynthesis protein EgtB, completes selenoneine biosynthesis in a pathway that also requires a SelD protein to prepare selenophosphate, EgtD to prepare hercynine, and the selenosugar-producing glycosyltransferase SenB (TIGR04348). SenA catalyzes selenium-carbon bond formation between hercynine and selenosugar to produce selenoneine. Other enzymes that create carbon-selenium bonds include SelA, involved in selenocysteine biosynthesis, SelU, involved in selenouridine biosynthesis, and SbtM, a radical SAM enzyme involved in post-translational modification of the RiPP precursor SbtA (see PMID:34730336).


Pssm-ID: 469092 [Multi-domain]  Cd Length: 384  Bit Score: 81.39  E-value: 4.23e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397   70 LPGGTVYMGTD-KPHFPADREAPERQVKLNDFYIDKYEVSNEAFAKFVlhtnyttEAERYGDsflfKSLLSPLEQKNLED 148
Cdd:NF041186 173 VPGGTFRLGSDpGPGFAFDNEKWAHPVEVAPFEIDAAPVTNAEFLAFV-------EAGGYRD----PRLWSAAGWAWLAA 241
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20130397  149 FRVASAVWWYKVAGVNWRHpngvdsdiDHLGR-------HPVVHVSWRDAVEYCKWAGKRLPSEAEWEAACRGGKErklF 221
Cdd:NF041186 242 QGLAAPRYWRRGADGAWQE--------RRFGRwqpldpdAPVVHVSAHEAEAYCRWAGRRLPTEAEWEYAAAGAPG---F 310

                 ....*.
gi 20130397  222 PWGNKL 227
Cdd:NF041186 311 PWGDSV 316
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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