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Conserved domains on  [gi|45550869|ref|NP_651870|]
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morpheyus, isoform A [Drosophila melanogaster]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ZP super family cl42957
Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona ...
 408-642 3.97e-23

Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan).


The actual alignment was detected with superfamily member smart00241:

Pssm-ID: 214579  Cd Length: 252  Bit Score: 99.38  E-value: 3.97e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    408 CRSGEMITKIRTSKLFDGKVYAKG---APKSC----AVNVNNSLEFDLKMRyndlECNVRQSAYGR---YMNDIVIQ-HH 476
Cdd:smart00241   2 CGEDQMVVSVSTDLLFPGGINVKGltlGDPSCrpqfTDATSAFVSFEVPLN----GCGTRRQVNPDgivYSNTLVVSpFH 77

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    477 DMIVTSSD-LGLAVSCQYDLTNKtVVNNVDLGvtgEIESTLSEEIIVDSPNVIMKItARDGSD--MKRIA--EVGDPLAL 551
Cdd:smart00241  78 PGFITRDDrAAYHFQCFYPENEK-VSLNLDVS---TIPPTELSSVSEGPLTCSYRL-YKDDSFgsPYQSAdyVLGDPVYH 152

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    552 RFEIVDANSP-YEIFVRELVAMDGTDSAEI---TLIDaNGCPTDQYIMSAMQKLANNRKVLLSQFDAFKFPSSELVQFRA 627
Cdd:smart00241 153 EWECDGADDPpLGLLVDNCYATPGPDPSSGpkyFIID-NGCPVDGYLDSTIPYNSNPLHRARFSVKVFKFADRSLVYFHC 231

                          250
                   ....*....|....*....
gi 45550869    628 LVTPCI----PRCEPVICD 642
Cdd:smart00241 232 QIRLCDkddgSSCDGPACS 250
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 233-311 6.17e-13

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


:

Pssm-ID: 238532  Cd Length: 80  Bit Score: 64.80  E-value: 6.17e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869 233 WCIDRVQGYRLPERAKASQSVATRRDCIELCLGETEFTCRSANYYAHSGLCELSDMDRITLSDEaniAAYD-GADYLENN 311
Cdd:cd01099   4 FKFVLVLNKILVSEVKTEITVASLEECLRKCLEETEFTCRSFNYNYKSKECILSDEDRMSSGVK---LLYDsNVDYYENK 80
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 320-399 6.67e-09

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


:

Pssm-ID: 459635  Cd Length: 76  Bit Score: 52.94  E-value: 6.67e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   320 CEFKRVAGRILKTVDSVHQNVQTLDECRDLCLTAPfRCHSYDYNETgELVCRLSHHSRATLTDLSEpylSIEEAATYEQS 399
Cdd:pfam00024   1 CDFERVPGSSLSGVDVSTVTVSSAEECAQRCTNEP-RCRSFTYNPK-SKKCHLKSSSSGSLPRLKR---SDNKVDYYEKS 75
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 146-223 3.92e-08

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


:

Pssm-ID: 459635  Cd Length: 76  Bit Score: 51.01  E-value: 3.92e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   146 FELITGYVLSAPSKQLETLPgtlMLTDCLEACQANESCSAVNYE--TGLCVMFRSTADQLPgSLSRSQYPVftVYAQKSC 223
Cdd:pfam00024   3 FERVPGSSLSGVDVSTVTVS---SAEECAQRCTNEPRCRSFTYNpkSKKCHLKSSSSGSLP-RLKRSDNKV--DYYEKSC 76
PRK07003 super family cl35530
DNA polymerase III subunit gamma/tau;
28-142 9.66e-03

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK07003:

Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 39.45  E-value: 9.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   28 SVAARKLPKrPAVKPLKTFPRNNATPIPPTGAGSGVATPNGSELPKPLSVEPAEAIAASPPGSIGDSSGASAAAPVPPAA 107
Cdd:PRK07003 374 ARVAGAVPA-PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAK 452

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 45550869  108 ASAAAVAETKADDLDPTPMATPSGSSSVDEDCEPD 142
Cdd:PRK07003 453 ANARASADSRCDERDAQPPADSGSASAPASDAPPD 487
 
Name Accession Description Interval E-value
ZP smart00241
Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona ...
 408-642 3.97e-23

Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan).


Pssm-ID: 214579  Cd Length: 252  Bit Score: 99.38  E-value: 3.97e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    408 CRSGEMITKIRTSKLFDGKVYAKG---APKSC----AVNVNNSLEFDLKMRyndlECNVRQSAYGR---YMNDIVIQ-HH 476
Cdd:smart00241   2 CGEDQMVVSVSTDLLFPGGINVKGltlGDPSCrpqfTDATSAFVSFEVPLN----GCGTRRQVNPDgivYSNTLVVSpFH 77

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    477 DMIVTSSD-LGLAVSCQYDLTNKtVVNNVDLGvtgEIESTLSEEIIVDSPNVIMKItARDGSD--MKRIA--EVGDPLAL 551
Cdd:smart00241  78 PGFITRDDrAAYHFQCFYPENEK-VSLNLDVS---TIPPTELSSVSEGPLTCSYRL-YKDDSFgsPYQSAdyVLGDPVYH 152

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    552 RFEIVDANSP-YEIFVRELVAMDGTDSAEI---TLIDaNGCPTDQYIMSAMQKLANNRKVLLSQFDAFKFPSSELVQFRA 627
Cdd:smart00241 153 EWECDGADDPpLGLLVDNCYATPGPDPSSGpkyFIID-NGCPVDGYLDSTIPYNSNPLHRARFSVKVFKFADRSLVYFHC 231

                          250
                   ....*....|....*....
gi 45550869    628 LVTPCI----PRCEPVICD 642
Cdd:smart00241 232 QIRLCDkddgSSCDGPACS 250
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 233-311 6.17e-13

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238532  Cd Length: 80  Bit Score: 64.80  E-value: 6.17e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869 233 WCIDRVQGYRLPERAKASQSVATRRDCIELCLGETEFTCRSANYYAHSGLCELSDMDRITLSDEaniAAYD-GADYLENN 311
Cdd:cd01099   4 FKFVLVLNKILVSEVKTEITVASLEECLRKCLEETEFTCRSFNYNYKSKECILSDEDRMSSGVK---LLYDsNVDYYENK 80
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 236-312 9.98e-11

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 58.33  E-value: 9.98e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 45550869   236 DRVQGYRLPERAKASQSVATRRDCIELCLGETefTCRSANYYAHSGLCELSDMDRITLSdeaNIAAYD-GADYLENNC 312
Cdd:pfam00024   4 ERVPGSSLSGVDVSTVTVSSAEECAQRCTNEP--RCRSFTYNPKSKKCHLKSSSSGSLP---RLKRSDnKVDYYEKSC 76
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 320-399 6.67e-09

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 52.94  E-value: 6.67e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   320 CEFKRVAGRILKTVDSVHQNVQTLDECRDLCLTAPfRCHSYDYNETgELVCRLSHHSRATLTDLSEpylSIEEAATYEQS 399
Cdd:pfam00024   1 CDFERVPGSSLSGVDVSTVTVSSAEECAQRCTNEP-RCRSFTYNPK-SKKCHLKSSSSGSLPRLKR---SDNKVDYYEKS 75
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 319-380 8.75e-09

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238532  Cd Length: 80  Bit Score: 52.86  E-value: 8.75e-09
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 45550869 319 LCEFKRVAGRILKTVDSVHQ--NVQTLDECRDLCLTA-PFRCHSYDYNETgELVCRLSHHSRATL 380
Cdd:cd01099   1 LNDFKFVLVLNKILVSEVKTeiTVASLEECLRKCLEEtEFTCRSFNYNYK-SKECILSDEDRMSS 64
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 146-223 3.92e-08

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 51.01  E-value: 3.92e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   146 FELITGYVLSAPSKQLETLPgtlMLTDCLEACQANESCSAVNYE--TGLCVMFRSTADQLPgSLSRSQYPVftVYAQKSC 223
Cdd:pfam00024   3 FERVPGSSLSGVDVSTVTVS---SAEECAQRCTNEPRCRSFTYNpkSKKCHLKSSSSGSLP-RLKRSDNKV--DYYEKSC 76
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 237-311 8.75e-07

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 47.19  E-value: 8.75e-07
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 45550869    237 RVQGYRLPERAKASQSVATRRDCIELCLgETEFTCRSANYYAHSGLCELSDMDR-ITLSDEANiaayDGADYLENN 311
Cdd:smart00473   8 RLPNTKLPGFSRIVISVASLEECASKCL-NSNCSCRSFTYNNGTKGCLLWSESSlGDARLFPS----GGVDLYEKI 78
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 322-377 5.79e-06

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 44.88  E-value: 5.79e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 45550869    322 FKRVAGRILKTVDSVHQNVQTLDECRDLCLTAPFRCHSYDYNETGELvCRLSHHSR 377
Cdd:smart00473   6 FVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKG-CLLWSESS 60
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
28-142 9.66e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 39.45  E-value: 9.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   28 SVAARKLPKrPAVKPLKTFPRNNATPIPPTGAGSGVATPNGSELPKPLSVEPAEAIAASPPGSIGDSSGASAAAPVPPAA 107
Cdd:PRK07003 374 ARVAGAVPA-PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAK 452

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 45550869  108 ASAAAVAETKADDLDPTPMATPSGSSSVDEDCEPD 142
Cdd:PRK07003 453 ANARASADSRCDERDAQPPADSGSASAPASDAPPD 487
 
Name Accession Description Interval E-value
ZP smart00241
Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona ...
 408-642 3.97e-23

Zona pellucida (ZP) domain; ZP proteins are responsible for sperm-adhesion fo the zona pellucida. ZP domains are also present in multidomain transmembrane proteins such as glycoprotein GP2, uromodulin and TGF-beta receptor type III (betaglycan).


Pssm-ID: 214579  Cd Length: 252  Bit Score: 99.38  E-value: 3.97e-23
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    408 CRSGEMITKIRTSKLFDGKVYAKG---APKSC----AVNVNNSLEFDLKMRyndlECNVRQSAYGR---YMNDIVIQ-HH 476
Cdd:smart00241   2 CGEDQMVVSVSTDLLFPGGINVKGltlGDPSCrpqfTDATSAFVSFEVPLN----GCGTRRQVNPDgivYSNTLVVSpFH 77

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    477 DMIVTSSD-LGLAVSCQYDLTNKtVVNNVDLGvtgEIESTLSEEIIVDSPNVIMKItARDGSD--MKRIA--EVGDPLAL 551
Cdd:smart00241  78 PGFITRDDrAAYHFQCFYPENEK-VSLNLDVS---TIPPTELSSVSEGPLTCSYRL-YKDDSFgsPYQSAdyVLGDPVYH 152

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869    552 RFEIVDANSP-YEIFVRELVAMDGTDSAEI---TLIDaNGCPTDQYIMSAMQKLANNRKVLLSQFDAFKFPSSELVQFRA 627
Cdd:smart00241 153 EWECDGADDPpLGLLVDNCYATPGPDPSSGpkyFIID-NGCPVDGYLDSTIPYNSNPLHRARFSVKVFKFADRSLVYFHC 231

                          250
                   ....*....|....*....
gi 45550869    628 LVTPCI----PRCEPVICD 642
Cdd:smart00241 232 QIRLCDkddgSSCDGPACS 250
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 233-311 6.17e-13

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238532  Cd Length: 80  Bit Score: 64.80  E-value: 6.17e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869 233 WCIDRVQGYRLPERAKASQSVATRRDCIELCLGETEFTCRSANYYAHSGLCELSDMDRITLSDEaniAAYD-GADYLENN 311
Cdd:cd01099   4 FKFVLVLNKILVSEVKTEITVASLEECLRKCLEETEFTCRSFNYNYKSKECILSDEDRMSSGVK---LLYDsNVDYYENK 80
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 236-312 9.98e-11

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 58.33  E-value: 9.98e-11
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 45550869   236 DRVQGYRLPERAKASQSVATRRDCIELCLGETefTCRSANYYAHSGLCELSDMDRITLSdeaNIAAYD-GADYLENNC 312
Cdd:pfam00024   4 ERVPGSSLSGVDVSTVTVSSAEECAQRCTNEP--RCRSFTYNPKSKKCHLKSSSSGSLP---RLKRSDnKVDYYEKSC 76
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 320-399 6.67e-09

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 52.94  E-value: 6.67e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   320 CEFKRVAGRILKTVDSVHQNVQTLDECRDLCLTAPfRCHSYDYNETgELVCRLSHHSRATLTDLSEpylSIEEAATYEQS 399
Cdd:pfam00024   1 CDFERVPGSSLSGVDVSTVTVSSAEECAQRCTNEP-RCRSFTYNPK-SKKCHLKSSSSGSLPRLKR---SDNKVDYYEKS 75
PAN_AP_HGF cd01099
Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen ...
 319-380 8.75e-09

Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238532  Cd Length: 80  Bit Score: 52.86  E-value: 8.75e-09
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 45550869 319 LCEFKRVAGRILKTVDSVHQ--NVQTLDECRDLCLTA-PFRCHSYDYNETgELVCRLSHHSRATL 380
Cdd:cd01099   1 LNDFKFVLVLNKILVSEVKTeiTVASLEECLRKCLEEtEFTCRSFNYNYK-SKECILSDEDRMSS 64
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 146-223 3.92e-08

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 51.01  E-value: 3.92e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   146 FELITGYVLSAPSKQLETLPgtlMLTDCLEACQANESCSAVNYE--TGLCVMFRSTADQLPgSLSRSQYPVftVYAQKSC 223
Cdd:pfam00024   3 FERVPGSSLSGVDVSTVTVS---SAEECAQRCTNEPRCRSFTYNpkSKKCHLKSSSSGSLP-RLKRSDNKV--DYYEKSC 76
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 237-311 8.75e-07

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 47.19  E-value: 8.75e-07
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 45550869    237 RVQGYRLPERAKASQSVATRRDCIELCLgETEFTCRSANYYAHSGLCELSDMDR-ITLSDEANiaayDGADYLENN 311
Cdd:smart00473   8 RLPNTKLPGFSRIVISVASLEECASKCL-NSNCSCRSFTYNNGTKGCLLWSESSlGDARLFPS----GGVDLYEKI 78
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 322-377 5.79e-06

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 44.88  E-value: 5.79e-06
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 45550869    322 FKRVAGRILKTVDSVHQNVQTLDECRDLCLTAPFRCHSYDYNETGELvCRLSHHSR 377
Cdd:smart00473   6 FVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKG-CLLWSESS 60
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
28-142 9.66e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 39.45  E-value: 9.66e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 45550869   28 SVAARKLPKrPAVKPLKTFPRNNATPIPPTGAGSGVATPNGSELPKPLSVEPAEAIAASPPGSIGDSSGASAAAPVPPAA 107
Cdd:PRK07003 374 ARVAGAVPA-PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAK 452

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 45550869  108 ASAAAVAETKADDLDPTPMATPSGSSSVDEDCEPD 142
Cdd:PRK07003 453 ANARASADSRCDERDAQPPADSGSASAPASDAPPD 487
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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