NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|24651745|ref|NP_651893|]
View 

beta glucuronidase [Drosophila melanogaster]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Bgal_small_N super family cl46900
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
56-662 0e+00

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


The actual alignment was detected with superfamily member PRK10150:

Pssm-ID: 481240 [Multi-domain]  Cd Length: 604  Bit Score: 640.51  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   56 LLYPRDSETREVRSLDGMWQLvRSDPYDPlqGIREKWFMDALRKTgreiISMPVPASYNDITTD-NLRDHVGTVWYERTF 134
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAF-KLDRENC--GIDQRWWESALPES----RAMAVPGSFNDQFADaDIRNYVGDVWYQREV 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  135 FVPRSWKTmQRTWLRFSSVHYSAVVWINGRNATSHSIGHLPFESEISGLLSFGGDNRITVMCDNRLSNRTIPQGSVykva 214
Cdd:PRK10150  74 FIPKGWAG-QRIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVRITVCVNNELNWQTLPPGNV---- 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  215 TDDGT-VPIQSYTFDFFNYAGIHRSVHLYTTPLLHISDLEVTTQLTKEG-LGRIDYRVwlDASKEGLQIqpiqlRVQLRD 292
Cdd:PRK10150 149 IEDGNgKKKQKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDLnHASVDWSV--ETNGDVDSV-----SVTLRD 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  293 KDGHVAAQQINKAvyhGTLLVPNATPWWPylMHsdpGYLYNLQFELFVAsnekelESLQDTYRLPVGIRSLSWDNDSLLL 372
Cdd:PRK10150 222 ADGQVVATGQGTS---GTLQVVNPHLWQP--GE---GYLYTLCVELAKS------GTECDTYPLRFGIRSVAVKGGQFLI 287
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  373 NGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEESMQFADQHGIMIIDECPAV------NI 446
Cdd:PRK10150 288 NGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVglnlsfGA 367
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  447 DIF--------------EPQLLENHMSSLEQLIHRDRNHPSVVAWSVANEPRSNKQGALKYFEFLVNYVREIAHGRPLTA 512
Cdd:PRK10150 368 GLEagnkpketyseeavNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTC 447
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  513 A--INANSSSCHLAQFLDIVGFNRYNSWYQNSGRTDMILNLLTIEAQSWRDRFGKPVIQFEYGGDTMEGMHSLPAFIWSE 590
Cdd:PRK10150 448 VnvMFATPDTDTVSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSE 527
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24651745  591 EYQVELFSRHFKAFDELRGrgwFIGEFVWNFADFRTAQTITRVGGNKKGVFTRNRQPKEVAHILRRRYFALA 662
Cdd:PRK10150 528 EYQCAFLDMYHRVFDRVPA---VVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGIP 596
 
Name Accession Description Interval E-value
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
56-662 0e+00

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 640.51  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   56 LLYPRDSETREVRSLDGMWQLvRSDPYDPlqGIREKWFMDALRKTgreiISMPVPASYNDITTD-NLRDHVGTVWYERTF 134
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAF-KLDRENC--GIDQRWWESALPES----RAMAVPGSFNDQFADaDIRNYVGDVWYQREV 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  135 FVPRSWKTmQRTWLRFSSVHYSAVVWINGRNATSHSIGHLPFESEISGLLSFGGDNRITVMCDNRLSNRTIPQGSVykva 214
Cdd:PRK10150  74 FIPKGWAG-QRIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVRITVCVNNELNWQTLPPGNV---- 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  215 TDDGT-VPIQSYTFDFFNYAGIHRSVHLYTTPLLHISDLEVTTQLTKEG-LGRIDYRVwlDASKEGLQIqpiqlRVQLRD 292
Cdd:PRK10150 149 IEDGNgKKKQKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDLnHASVDWSV--ETNGDVDSV-----SVTLRD 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  293 KDGHVAAQQINKAvyhGTLLVPNATPWWPylMHsdpGYLYNLQFELFVAsnekelESLQDTYRLPVGIRSLSWDNDSLLL 372
Cdd:PRK10150 222 ADGQVVATGQGTS---GTLQVVNPHLWQP--GE---GYLYTLCVELAKS------GTECDTYPLRFGIRSVAVKGGQFLI 287
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  373 NGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEESMQFADQHGIMIIDECPAV------NI 446
Cdd:PRK10150 288 NGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVglnlsfGA 367
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  447 DIF--------------EPQLLENHMSSLEQLIHRDRNHPSVVAWSVANEPRSNKQGALKYFEFLVNYVREIAHGRPLTA 512
Cdd:PRK10150 368 GLEagnkpketyseeavNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTC 447
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  513 A--INANSSSCHLAQFLDIVGFNRYNSWYQNSGRTDMILNLLTIEAQSWRDRFGKPVIQFEYGGDTMEGMHSLPAFIWSE 590
Cdd:PRK10150 448 VnvMFATPDTDTVSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSE 527
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24651745  591 EYQVELFSRHFKAFDELRGrgwFIGEFVWNFADFRTAQTITRVGGNKKGVFTRNRQPKEVAHILRRRYFALA 662
Cdd:PRK10150 528 EYQCAFLDMYHRVFDRVPA---VVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGIP 596
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
122-658 4.23e-99

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 317.47  E-value: 4.23e-99
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 122 RDHVGTVWYERTFFVPRSWKTmQRTWLRFSSVHYSAVVWINGRNATSHSIGHLPFESEISGLLSFGgDNRITVMCDNRlS 201
Cdd:COG3250  48 YLYNGVGWYRRTFTVPASWKG-KRVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPG-ENVLAVRVDNP-S 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 202 NRTIPQGsvykvatddgtvpiqsytFDFFNYAGIHRSVHLYTTPLLHISDLEVTTQLTkEGLGRIDYRVWLDASKEglqi 281
Cdd:COG3250 125 DGSYLEG------------------QDWWRTSGIYRDVWLEATPKVHIEDVFVTPDLD-DGSATLTVEVELENESD---- 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 282 QPIQLRVQLRDKDGHVAAQQINKAVYHG--------TLLVPNATPWWPylmhSDPgYLYNLQFELFVASNekelesLQDT 353
Cdd:COG3250 182 AGVTVEVTLLDADGKVVATATAKVTLAAgeentvtlTLTVPNPKLWSP----EDP-NLYTLVVTLKDDGK------VVDT 250
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 354 YRLPVGIRSLSWDNDS-LLLNGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEESMQFADQ 432
Cdd:COG3250 251 VSTRFGFRTIEIDGDGgFLLNGKPVFLKGVNRHEDWPDDGRAVTDEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDE 330
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 433 HGIMIIDECPAVNIDIF--EPQLLENHMSSLEQLIHRDRNHPSVVAWSVANEPrsnkqGALKYFEFLVNYVREIAHGRPL 510
Cdd:COG3250 331 LGLLVWDEAPFEWHGMLgdDPEFLEAVEAELREMVRRDRNHPSIILWSGGNES-----GGGPNFAALYEWVKELDPTRPV 405
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 511 taainanssschlaqfldivgfnRYNSwyqnsgrtdmilnlltieaqswrdrfgkpviqfEYG---GDTMEGMHSLPAfi 587
Cdd:COG3250 406 -----------------------RFLS---------------------------------EYGhamPNSLGGGYHQPS-- 427
                       490       500       510       520       530       540       550
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24651745 588 WSEEYQVELFSRHfkAFDELRGRGWFIGEFVWNFADFRTAQTITRVGGNKKGVFT-RNRQPKEVAHILRRRY 658
Cdd:COG3250 428 DFEEYQALQALEE--YWEAFRRRPRLAGGFIWQLNDYWPEPRDNDGNFCSWGLVDyYDRTPKPAYYEVKSAW 497
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
370-658 1.76e-69

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 228.87  E-value: 1.76e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   370 LLLNGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEESMQFADQHGIMIIDECPAV----- 444
Cdd:pfam02836   8 FLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEANLEthglw 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   445 ----------NIDIFEPQLLENHMSSLEQLIHRDRNHPSVVAWSVANEPrsnkqGALKYFEFLVNYVREIAHGRPLTAAI 514
Cdd:pfam02836  88 qkfgeiepsySELTDNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNES-----GAGENIAAMYAATKSLDPTRPVHYEG 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   515 NANssschlAQFLDIVGFNRYNSWYQNSGrtdmILNLLTIEAQSWRDRFGKPVIQFEYGGDTM--EGMHSLPAFIWS--E 590
Cdd:pfam02836 163 VGI------DPEVDDIILDIYSRMYEDYG----HPEVIEKYLEDWYKKPQKPIIICEYGHAMGnsPGGLQEYQDLFYkyP 232
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24651745   591 EYQ---VELFSRHF-KAFDELRGrgwfiGEFVWNFADFRTAQTITRVGGNkkGVFTRNRQPKEVAHILRRRY 658
Cdd:pfam02836 233 EYQggfIWDWHDQGiQKRDPNVG-----GEWYWYGGDFGDRPSDYRFCGN--GLFFADRTPKPALFELKKRY 297
 
Name Accession Description Interval E-value
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
56-662 0e+00

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 640.51  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   56 LLYPRDSETREVRSLDGMWQLvRSDPYDPlqGIREKWFMDALRKTgreiISMPVPASYNDITTD-NLRDHVGTVWYERTF 134
Cdd:PRK10150   1 MLYPVETKTREIKDLSGLWAF-KLDRENC--GIDQRWWESALPES----RAMAVPGSFNDQFADaDIRNYVGDVWYQREV 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  135 FVPRSWKTmQRTWLRFSSVHYSAVVWINGRNATSHSIGHLPFESEISGLLSFGGDNRITVMCDNRLSNRTIPQGSVykva 214
Cdd:PRK10150  74 FIPKGWAG-QRIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVRITVCVNNELNWQTLPPGNV---- 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  215 TDDGT-VPIQSYTFDFFNYAGIHRSVHLYTTPLLHISDLEVTTQLTKEG-LGRIDYRVwlDASKEGLQIqpiqlRVQLRD 292
Cdd:PRK10150 149 IEDGNgKKKQKYNFDFFNYAGIHRPVMLYTTPKTHIDDITVVTELAQDLnHASVDWSV--ETNGDVDSV-----SVTLRD 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  293 KDGHVAAQQINKAvyhGTLLVPNATPWWPylMHsdpGYLYNLQFELFVAsnekelESLQDTYRLPVGIRSLSWDNDSLLL 372
Cdd:PRK10150 222 ADGQVVATGQGTS---GTLQVVNPHLWQP--GE---GYLYTLCVELAKS------GTECDTYPLRFGIRSVAVKGGQFLI 287
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  373 NGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEESMQFADQHGIMIIDECPAV------NI 446
Cdd:PRK10150 288 NGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDETPAVglnlsfGA 367
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  447 DIF--------------EPQLLENHMSSLEQLIHRDRNHPSVVAWSVANEPRSNKQGALKYFEFLVNYVREIAHGRPLTA 512
Cdd:PRK10150 368 GLEagnkpketyseeavNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPASREQGAREYFAPLAELTRKLDPTRPVTC 447
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745  513 A--INANSSSCHLAQFLDIVGFNRYNSWYQNSGRTDMILNLLTIEAQSWRDRFGKPVIQFEYGGDTMEGMHSLPAFIWSE 590
Cdd:PRK10150 448 VnvMFATPDTDTVSDLVDVLCLNRYYGWYVDSGDLETAEKVLEKELLAWQEKLHKPIIITEYGADTLAGLHSMYDDMWSE 527
                        570       580       590       600       610       620       630
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24651745  591 EYQVELFSRHFKAFDELRGrgwFIGEFVWNFADFRTAQTITRVGGNKKGVFTRNRQPKEVAHILRRRYFALA 662
Cdd:PRK10150 528 EYQCAFLDMYHRVFDRVPA---VVGEQVWNFADFATSQGILRVGGNKKGIFTRDRQPKSAAFLLKKRWTGIP 596
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
122-658 4.23e-99

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 317.47  E-value: 4.23e-99
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 122 RDHVGTVWYERTFFVPRSWKTmQRTWLRFSSVHYSAVVWINGRNATSHSIGHLPFESEISGLLSFGgDNRITVMCDNRlS 201
Cdd:COG3250  48 YLYNGVGWYRRTFTVPASWKG-KRVFLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYLKPG-ENVLAVRVDNP-S 124
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 202 NRTIPQGsvykvatddgtvpiqsytFDFFNYAGIHRSVHLYTTPLLHISDLEVTTQLTkEGLGRIDYRVWLDASKEglqi 281
Cdd:COG3250 125 DGSYLEG------------------QDWWRTSGIYRDVWLEATPKVHIEDVFVTPDLD-DGSATLTVEVELENESD---- 181
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 282 QPIQLRVQLRDKDGHVAAQQINKAVYHG--------TLLVPNATPWWPylmhSDPgYLYNLQFELFVASNekelesLQDT 353
Cdd:COG3250 182 AGVTVEVTLLDADGKVVATATAKVTLAAgeentvtlTLTVPNPKLWSP----EDP-NLYTLVVTLKDDGK------VVDT 250
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 354 YRLPVGIRSLSWDNDS-LLLNGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEESMQFADQ 432
Cdd:COG3250 251 VSTRFGFRTIEIDGDGgFLLNGKPVFLKGVNRHEDWPDDGRAVTDEAMRRDLELMKEAGFNAVRTSHYPEDPEFYDLCDE 330
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 433 HGIMIIDECPAVNIDIF--EPQLLENHMSSLEQLIHRDRNHPSVVAWSVANEPrsnkqGALKYFEFLVNYVREIAHGRPL 510
Cdd:COG3250 331 LGLLVWDEAPFEWHGMLgdDPEFLEAVEAELREMVRRDRNHPSIILWSGGNES-----GGGPNFAALYEWVKELDPTRPV 405
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745 511 taainanssschlaqfldivgfnRYNSwyqnsgrtdmilnlltieaqswrdrfgkpviqfEYG---GDTMEGMHSLPAfi 587
Cdd:COG3250 406 -----------------------RFLS---------------------------------EYGhamPNSLGGGYHQPS-- 427
                       490       500       510       520       530       540       550
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24651745 588 WSEEYQVELFSRHfkAFDELRGRGWFIGEFVWNFADFRTAQTITRVGGNKKGVFT-RNRQPKEVAHILRRRY 658
Cdd:COG3250 428 DFEEYQALQALEE--YWEAFRRRPRLAGGFIWQLNDYWPEPRDNDGNFCSWGLVDyYDRTPKPAYYEVKSAW 497
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
370-658 1.76e-69

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 228.87  E-value: 1.76e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   370 LLLNGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEESMQFADQHGIMIIDECPAV----- 444
Cdd:pfam02836   8 FLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEANLEthglw 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   445 ----------NIDIFEPQLLENHMSSLEQLIHRDRNHPSVVAWSVANEPrsnkqGALKYFEFLVNYVREIAHGRPLTAAI 514
Cdd:pfam02836  88 qkfgeiepsySELTDNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNES-----GAGENIAAMYAATKSLDPTRPVHYEG 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   515 NANssschlAQFLDIVGFNRYNSWYQNSGrtdmILNLLTIEAQSWRDRFGKPVIQFEYGGDTM--EGMHSLPAFIWS--E 590
Cdd:pfam02836 163 VGI------DPEVDDIILDIYSRMYEDYG----HPEVIEKYLEDWYKKPQKPIIICEYGHAMGnsPGGLQEYQDLFYkyP 232
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 24651745   591 EYQ---VELFSRHF-KAFDELRGrgwfiGEFVWNFADFRTAQTITRVGGNkkGVFTRNRQPKEVAHILRRRY 658
Cdd:pfam02836 233 EYQggfIWDWHDQGiQKRDPNVG-----GEWYWYGGDFGDRPSDYRFCGN--GLFFADRTPKPALFELKKRY 297
lacZ PRK09525
beta-galactosidase;
130-482 2.32e-31

beta-galactosidase;


Pssm-ID: 236548 [Multi-domain]  Cd Length: 1027  Bit Score: 131.21  E-value: 2.32e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   130 YERTFFVPRSWKTMQRTWLRFSSVHYSAVVWINGrnatsHSIGH-----LPFESEISGLLSfGGDNRITVMCdNRLSnrt 204
Cdd:PRK09525  124 YSLTFTVDESWLQSGQTRIIFDGVNSAFHLWCNG-----RWVGYsqdsrLPAEFDLSPFLR-AGENRLAVMV-LRWS--- 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   205 ipqgsvykvatdDGtvpiqSY--TFDFFNYAGIHRSVHLYTTPLLHISDLEVTTQLTKeglgriDYR---VWLDASKEGL 279
Cdd:PRK09525  194 ------------DG-----SYleDQDMWRMSGIFRDVSLLHKPTTQLSDFHITTELDD------DFRravLEVEAQVNGE 250
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   280 QIQPIQLRVQLRDKDGHVAAQQI---NKAV-----YHG----TLLVPNatpwwPYLMHSDPGYLYNLQFELFVASNEK-E 346
Cdd:PRK09525  251 LRDELRVTVQLWDGETLVASGTApfgTEIIdergaYADrvtlRLNVEN-----PKLWSAETPNLYRAVVSLLDADGTLiE 325
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   347 LESLQdtyrlpVGIRSLSWDNDSLLLNGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEES 426
Cdd:PRK09525  326 AEAYD------VGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYPNHPLW 399
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 24651745   427 MQFADQHGIMIIDEcpaVNIDIF----------EPQLLENHMSSLEQLIHRDRNHPSVVAWSVANE 482
Cdd:PRK09525  400 YELCDRYGLYVVDE---ANIETHgmvpmnrlsdDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNE 462
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
130-482 6.87e-29

cryptic beta-D-galactosidase subunit alpha; Reviewed


Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 123.25  E-value: 6.87e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   130 YERTFFVPRSWKTmQRTWLRFSSVHYSAVVWINGrnatsHSIGH-----LPFESEISGLLSfGGDNRITVmcdnrlsnrt 204
Cdd:PRK10340  113 YQRTFTLSDGWQG-KQTIIKFDGVETYFEVYVNG-----QYVGFskgsrLTAEFDISAMVK-TGDNLLCV---------- 175
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   205 ipqgSVYKVAtdDGT-VPIQsytfDFFNYAGIHRSVHLYTTPLLHISDLEVTTQLTKeglgriDYR---VWLDASKEGL- 279
Cdd:PRK10340  176 ----RVMQWA--DSTyLEDQ----DMWWLAGIFRDVYLVGKPLTHINDFTVRTDFDE------DYCdatLSCEVVLENLa 239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   280 -QIQPIQLRVQLRDKDGHVAAQQINKAVYHG------TLLVPNATPWwpylMHSDPgYLYNLQFELFvASNEKELESLqd 352
Cdd:PRK10340  240 aSPVVTTLEYTLFDGERVVHSSAIDHLAIEKltsasfAFTVEQPQQW----SAESP-YLYHLVMTLK-DANGNVLEVV-- 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   353 tyRLPVGIRSLSWDNDSLLLNGKPLYLRGFGRHEDSDIRGKGLDNALLARDFNLLKWTGANAYRTSHYPYSEESMQFADQ 432
Cdd:PRK10340  312 --PQRVGFRDIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDI 389
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 24651745   433 HGIMIIDECpavniDI----FE-----------PQLLENHMSSLEQLIHRDRNHPSVVAWSVANE 482
Cdd:PRK10340  390 YGLFVMAET-----DVeshgFAnvgdisritddPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNE 449
Glyco_hydro_2_N pfam02837
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, ...
67-245 1.69e-23

Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.


Pssm-ID: 397120 [Multi-domain]  Cd Length: 169  Bit Score: 97.70  E-value: 1.69e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745    67 VRSLDGMWQLVRsdpYDPLQGIREKWFMDALRKTgrEIISmpVPASYN------------DITTDNLRDHVGTVWYERTF 134
Cdd:pfam02837   1 IKSLNGEWAFAL---FDAPCGAPQSWWESALQES--RTIA--VPSSWNdqpiytnveypiDFADPFIPTYNGTGWYQRTF 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   135 FVPRSWKTmQRTWLRFSSVHYSAVVWINGRNATSHSIGHLPFESEISGLLSfGGDNRITVMcdnrlsnrtIPQGSVYKVA 214
Cdd:pfam02837  74 FIPSKWAG-QRIRLRFDGVTHYGEVWVNGQWVGEHQGGYTPFEFDLTPYVI-AGKNRIAVK---------VLNWSDG*YI 142
                         170       180       190
                  ....*....|....*....|....*....|.
gi 24651745   215 TDDGtvpiQSYTFDFFNYAGIHRSVHLYTTP 245
Cdd:pfam02837 143 EDQN----GKYFHDFWNYSGIYRDVSLLTTP 169
Glyco_hydro_2 pfam00703
Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and ...
248-361 1.93e-06

Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 395572 [Multi-domain]  Cd Length: 106  Bit Score: 46.70  E-value: 1.93e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651745   248 HISDLEVTTQLTKEGLGRIDYRVwlDASKEGLQIQPIQLRVQLRDKDGH----VAAQQINKAVYHGTLLVPNATPWWPyl 323
Cdd:pfam00703   2 HIEDVFITPDLDDDKTAKVTVEV--ELENDGDASVEVTLETEIKDADGKtvaaAAKVLVLGAGETTELEVKNPKLWSP-- 77
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 24651745   324 mhsDPGYLYNLQFELFVAsnekelESLQDTYRLPVGIR 361
Cdd:pfam00703  78 ---ETPNLYTLTVELDKD------GKVIDEVSTRFGFR 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH