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Conserved domains on  [gi|665407417|ref|NP_723559|]
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uncharacterized protein Dmel_CG13138, isoform C [Drosophila melanogaster]

Protein Classification

IMCp domain-containing protein( domain architecture ID 10574203)

IMCp (inner membrane complex protein) domain-containing protein, such as Plasmodium berghei inner membrane complex protein 1 and Pseudomicrothorax dubius articulin 1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
IMCp pfam12314
Inner membrane complex protein; This domain is found in bacteria and eukaryotes. This domain ...
 209-276 1.63e-07

Inner membrane complex protein; This domain is found in bacteria and eukaryotes. This domain is about 120 amino acids in length. This family is the inner membrane complex of parasitic organizms. This is a cytoskeletal structure associated with the pellicle of these parasites.


:

Pssm-ID: 403508 [Multi-domain]  Cd Length: 87  Bit Score: 49.23  E-value: 1.63e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 665407417  209 IVHVPKLVNVTVEKIVHVPIEKIVEKVIHIP----KPVQVPKPYVVEKIIEKIVHVPKPYPVLRTVPYPVEI 276
Cdd:pfam12314   1 IKEVPKYIIKYQEKIIEVPEIKYVDKIVEVPvyvyKEKIVPKVEIVERIIPVPKIEKKIKEKIVEVPQIKEV 72
 
Name Accession Description Interval E-value
IMCp pfam12314
Inner membrane complex protein; This domain is found in bacteria and eukaryotes. This domain ...
 209-276 1.63e-07

Inner membrane complex protein; This domain is found in bacteria and eukaryotes. This domain is about 120 amino acids in length. This family is the inner membrane complex of parasitic organizms. This is a cytoskeletal structure associated with the pellicle of these parasites.


Pssm-ID: 403508 [Multi-domain]  Cd Length: 87  Bit Score: 49.23  E-value: 1.63e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 665407417  209 IVHVPKLVNVTVEKIVHVPIEKIVEKVIHIP----KPVQVPKPYVVEKIIEKIVHVPKPYPVLRTVPYPVEI 276
Cdd:pfam12314   1 IKEVPKYIIKYQEKIIEVPEIKYVDKIVEVPvyvyKEKIVPKVEIVERIIPVPKIEKKIKEKIVEVPQIKEV 72
 
Name Accession Description Interval E-value
IMCp pfam12314
Inner membrane complex protein; This domain is found in bacteria and eukaryotes. This domain ...
 209-276 1.63e-07

Inner membrane complex protein; This domain is found in bacteria and eukaryotes. This domain is about 120 amino acids in length. This family is the inner membrane complex of parasitic organizms. This is a cytoskeletal structure associated with the pellicle of these parasites.


Pssm-ID: 403508 [Multi-domain]  Cd Length: 87  Bit Score: 49.23  E-value: 1.63e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 665407417  209 IVHVPKLVNVTVEKIVHVPIEKIVEKVIHIP----KPVQVPKPYVVEKIIEKIVHVPKPYPVLRTVPYPVEI 276
Cdd:pfam12314   1 IKEVPKYIIKYQEKIIEVPEIKYVDKIVEVPvyvyKEKIVPKVEIVERIIPVPKIEKKIKEKIVEVPQIKEV 72
IMCp pfam12314
Inner membrane complex protein; This domain is found in bacteria and eukaryotes. This domain ...
 185-279 5.38e-07

Inner membrane complex protein; This domain is found in bacteria and eukaryotes. This domain is about 120 amino acids in length. This family is the inner membrane complex of parasitic organizms. This is a cytoskeletal structure associated with the pellicle of these parasites.


Pssm-ID: 403508 [Multi-domain]  Cd Length: 87  Bit Score: 47.69  E-value: 5.38e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 665407417  185 IKTVPQPYP--VEKVVHVPIEKIVEKIVHVPklvnVTVEKIVHVPIEKIVEKVIHIPKpvqvpkpyVVEKIIEKIVHVPK 262
Cdd:pfam12314   1 IKEVPKYIIkyQEKIIEVPEIKYVDKIVEVP----VYVYKEKIVPKVEIVERIIPVPK--------IEKKIKEKIVEVPQ 68

                          90
                  ....*....|....*..
gi 665407417  263 PYPVLRTVPYPVEIKVP 279
Cdd:pfam12314  69 IKEVIRYKEVEVVEEVP 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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