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Conserved domains on  [gi|24649444|ref|NP_732915|]
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uncharacterized protein Dmel_CG31142 [Drosophila melanogaster]

Protein Classification

fliH and Yae1_N domain-containing protein( domain architecture ID 13251650)

fliH and Yae1_N domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 33-70 2.97e-08

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


:

Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 47.03  E-value: 2.97e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 24649444    33 YADGVADGREKVFQESFDEGFENGFKTGFELAKLSAFY 70
Cdd:pfam09811   2 YREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
fliH super family cl30579
flagellar assembly protein H; Provisional
 8-98 2.48e-03

flagellar assembly protein H; Provisional


The actual alignment was detected with superfamily member PRK13386:

Pssm-ID: 237372 [Multi-domain]  Cd Length: 236  Bit Score: 36.92  E-value: 2.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24649444    8 DDETEFKEISSTNYHRV-----QEKVAKiSYADGVADGREKVFQESFDEGFENGFKTGFELAKLSA---FYETIS--NAA 77
Cdd:PRK13386  27 QVAPSAATLDPADYQQQlmagfQEGIQQ-GFDQGLEEGEEEGRQEGHAAGFAQGRQKGRIEGRQSIrqqFNDAAKplGAL 105

                         90       100
                 ....*....|....*....|.
gi 24649444   78 GAESSEWNAEREAYQKLQLAD 98
Cdd:PRK13386 106 RQQLERYLAEYEQQQRDELLD 126
 
Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 33-70 2.97e-08

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 47.03  E-value: 2.97e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 24649444    33 YADGVADGREKVFQESFDEGFENGFKTGFELAKLSAFY 70
Cdd:pfam09811   2 YREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
fliH PRK13386
flagellar assembly protein H; Provisional
 8-98 2.48e-03

flagellar assembly protein H; Provisional


Pssm-ID: 237372 [Multi-domain]  Cd Length: 236  Bit Score: 36.92  E-value: 2.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24649444    8 DDETEFKEISSTNYHRV-----QEKVAKiSYADGVADGREKVFQESFDEGFENGFKTGFELAKLSA---FYETIS--NAA 77
Cdd:PRK13386  27 QVAPSAATLDPADYQQQlmagfQEGIQQ-GFDQGLEEGEEEGRQEGHAAGFAQGRQKGRIEGRQSIrqqFNDAAKplGAL 105

                         90       100
                 ....*....|....*....|.
gi 24649444   78 GAESSEWNAEREAYQKLQLAD 98
Cdd:PRK13386 106 RQQLERYLAEYEQQQRDELLD 126
 
Name Accession Description Interval E-value
Yae1_N pfam09811
Essential protein Yae1, N terminal; Members of this family are found in the N terminal region ...
 33-70 2.97e-08

Essential protein Yae1, N terminal; Members of this family are found in the N terminal region of the essential protein Yae1. Their exact function has not, as yet, been determined. The family DUF1715, pfam08215 has now been merged into this family.


Pssm-ID: 430844 [Multi-domain]  Cd Length: 39  Bit Score: 47.03  E-value: 2.97e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 24649444    33 YADGVADGREKVFQESFDEGFENGFKTGFELAKLSAFY 70
Cdd:pfam09811   2 YREGISEGKEEGLQEGFDEGFQEGAQLGLEIGYLLGKL 39
fliH PRK13386
flagellar assembly protein H; Provisional
 8-98 2.48e-03

flagellar assembly protein H; Provisional


Pssm-ID: 237372 [Multi-domain]  Cd Length: 236  Bit Score: 36.92  E-value: 2.48e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24649444    8 DDETEFKEISSTNYHRV-----QEKVAKiSYADGVADGREKVFQESFDEGFENGFKTGFELAKLSA---FYETIS--NAA 77
Cdd:PRK13386  27 QVAPSAATLDPADYQQQlmagfQEGIQQ-GFDQGLEEGEEEGRQEGHAAGFAQGRQKGRIEGRQSIrqqFNDAAKplGAL 105

                         90       100
                 ....*....|....*....|.
gi 24649444   78 GAESSEWNAEREAYQKLQLAD 98
Cdd:PRK13386 106 RQQLERYLAEYEQQQRDELLD 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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