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Conserved domains on  [gi|24651337|ref|NP_733355|]
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ribosomal protein S7, isoform C [Drosophila melanogaster]

Protein Classification

eS7 family ribosomal protein( domain architecture ID 10472486)

eS7 family ribosomal protein is a component of the small ribosomal subunit.

Gene Ontology:  GO:0003735|GO:0006412
PubMed:  24524803

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
Ribosomal_S7e pfam01251
Ribosomal protein S7e;
6-187 2.47e-108

Ribosomal protein S7e;


:

Pssm-ID: 460135  Cd Length: 182  Bit Score: 307.53  E-value: 2.47e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337     6 KIIKPGGSDPDDFEKSIAQALVELEAN-SDLKPYLRDLHITRAREIEFGS-KKAVIIYVPIPQQKVFQKIQIILVRELEK 83
Cdd:pfam01251   1 KIKKPKGEEPTELEEQVAQALLDLENNsSDLKADLRELQISSAKEVDVGGgKKAIVIFVPVPQLKAFHKIQQRLVRELEK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337    84 KFSGKHVVVIAERKILPKPTRKarNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTT 163
Cdd:pfam01251  81 KFSGKHVVFVAQRRILPKPTRK--SKKKQKRPRSRTLTAVHDAILEDLVYPTEIVGKRTRVRLDGSKLLKVFLDSKDRTN 158
                         170       180
                  ....*....|....*....|....
gi 24651337   164 IEHKVDTFTSVYKKLTGRDVTFEF 187
Cdd:pfam01251 159 VEHKLDTFSAVYKKLTGKDVVFEF 182
 
Name Accession Description Interval E-value
Ribosomal_S7e pfam01251
Ribosomal protein S7e;
6-187 2.47e-108

Ribosomal protein S7e;


Pssm-ID: 460135  Cd Length: 182  Bit Score: 307.53  E-value: 2.47e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337     6 KIIKPGGSDPDDFEKSIAQALVELEAN-SDLKPYLRDLHITRAREIEFGS-KKAVIIYVPIPQQKVFQKIQIILVRELEK 83
Cdd:pfam01251   1 KIKKPKGEEPTELEEQVAQALLDLENNsSDLKADLRELQISSAKEVDVGGgKKAIVIFVPVPQLKAFHKIQQRLVRELEK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337    84 KFSGKHVVVIAERKILPKPTRKarNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTT 163
Cdd:pfam01251  81 KFSGKHVVFVAQRRILPKPTRK--SKKKQKRPRSRTLTAVHDAILEDLVYPTEIVGKRTRVRLDGSKLLKVFLDSKDRTN 158
                         170       180
                  ....*....|....*....|....
gi 24651337   164 IEHKVDTFTSVYKKLTGRDVTFEF 187
Cdd:pfam01251 159 VEHKLDTFSAVYKKLTGKDVVFEF 182
PTZ00389 PTZ00389
40S ribosomal protein S7; Provisional
7-190 1.61e-70

40S ribosomal protein S7; Provisional


Pssm-ID: 185592  Cd Length: 184  Bit Score: 212.14  E-value: 1.61e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337    7 IIKPGGSDPDDFEKSIAQALVELEANS-DLKPYLRDLHITRAREIEFG--SKKAVIIYVPIPQQKVFQKIQIILVRELEK 83
Cdd:PTZ00389   1 IKKLKKAEPSELEKQVAKALFELEASSkDLKADLKNLKISSVKEVTVGkdKKKAVVVFVPYRMLMIYRKIQRKLIPELEK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337   84 KFsGKHVVVIAERKILPKPTRKARnplKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTT 163
Cdd:PTZ00389  81 KL-KKHVVIVAQRTILKKPVKNYK---LKTRPRSRTLTAVHEAILEDLVYPSEIVGKRTRVRVDGSKLLKVFLDPKDRKN 156
                        170       180
                 ....*....|....*....|....*..
gi 24651337  164 IEHKVDTFTSVYKKLTGRDVTFEFPDN 190
Cdd:PTZ00389 157 VEEKLDAFSAVYKKLTGRDVVFEFPWD 183
 
Name Accession Description Interval E-value
Ribosomal_S7e pfam01251
Ribosomal protein S7e;
6-187 2.47e-108

Ribosomal protein S7e;


Pssm-ID: 460135  Cd Length: 182  Bit Score: 307.53  E-value: 2.47e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337     6 KIIKPGGSDPDDFEKSIAQALVELEAN-SDLKPYLRDLHITRAREIEFGS-KKAVIIYVPIPQQKVFQKIQIILVRELEK 83
Cdd:pfam01251   1 KIKKPKGEEPTELEEQVAQALLDLENNsSDLKADLRELQISSAKEVDVGGgKKAIVIFVPVPQLKAFHKIQQRLVRELEK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337    84 KFSGKHVVVIAERKILPKPTRKarNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTT 163
Cdd:pfam01251  81 KFSGKHVVFVAQRRILPKPTRK--SKKKQKRPRSRTLTAVHDAILEDLVYPTEIVGKRTRVRLDGSKLLKVFLDSKDRTN 158
                         170       180
                  ....*....|....*....|....
gi 24651337   164 IEHKVDTFTSVYKKLTGRDVTFEF 187
Cdd:pfam01251 159 VEHKLDTFSAVYKKLTGKDVVFEF 182
PTZ00389 PTZ00389
40S ribosomal protein S7; Provisional
7-190 1.61e-70

40S ribosomal protein S7; Provisional


Pssm-ID: 185592  Cd Length: 184  Bit Score: 212.14  E-value: 1.61e-70
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337    7 IIKPGGSDPDDFEKSIAQALVELEANS-DLKPYLRDLHITRAREIEFG--SKKAVIIYVPIPQQKVFQKIQIILVRELEK 83
Cdd:PTZ00389   1 IKKLKKAEPSELEKQVAKALFELEASSkDLKADLKNLKISSVKEVTVGkdKKKAVVVFVPYRMLMIYRKIQRKLIPELEK 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24651337   84 KFsGKHVVVIAERKILPKPTRKARnplKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHLDKNQQTT 163
Cdd:PTZ00389  81 KL-KKHVVIVAQRTILKKPVKNYK---LKTRPRSRTLTAVHEAILEDLVYPSEIVGKRTRVRVDGSKLLKVFLDPKDRKN 156
                        170       180
                 ....*....|....*....|....*..
gi 24651337  164 IEHKVDTFTSVYKKLTGRDVTFEFPDN 190
Cdd:PTZ00389 157 VEEKLDAFSAVYKKLTGRDVVFEFPWD 183
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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