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Conserved domains on  [gi|41152388|ref|NP_956302|]
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pancreatic progenitor cell differentiation and proliferation factor B [Danio rerio]

Protein Classification

PPDFL domain-containing protein( domain architecture ID 10633372)

PPDFL domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PPDFL pfam15060
Differentiation and proliferation regulator; Pancreatic progenitor cell differentiation and ...
 1-106 8.21e-50

Differentiation and proliferation regulator; Pancreatic progenitor cell differentiation and proliferation factor-like protein (PPDFL) is alternatively named Exocrine differentiation and proliferation factor-like protein. PPDFL regulates exocrine cell fate. This protein is highly expressed in exocrine progenitor cells which eventually differentiate to form exocrine pancreatic cells.


:

Pssm-ID: 464477  Cd Length: 110  Bit Score: 153.87  E-value: 8.21e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152388     1 MAAIPASGSLVATHDYYRRRIGSTSSSSSCGSSEYSGEVIPHHPGLPKQDSGHWWSSFFFGKQNLPGMGTVaEEAQQKSG 80
Cdd:pfam15060   1 MAAIPSSGSLVATHDYYRRRLGSTSSNSSCGSAEYPGEVIPHHPGLPKADPGHWWASFFFGKSNLPFMATV-LESPEHSG 79

                          90       100       110
                  ....*....|....*....|....*....|.
gi 41152388    81 VVSVTNGQVTCVAREMVMR-----QASESSD 106
Cdd:pfam15060  80 SPQASSGMITCDLAQEAMRkqpgsQPSKTSA 110
 
Name Accession Description Interval E-value
PPDFL pfam15060
Differentiation and proliferation regulator; Pancreatic progenitor cell differentiation and ...
 1-106 8.21e-50

Differentiation and proliferation regulator; Pancreatic progenitor cell differentiation and proliferation factor-like protein (PPDFL) is alternatively named Exocrine differentiation and proliferation factor-like protein. PPDFL regulates exocrine cell fate. This protein is highly expressed in exocrine progenitor cells which eventually differentiate to form exocrine pancreatic cells.


Pssm-ID: 464477  Cd Length: 110  Bit Score: 153.87  E-value: 8.21e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152388     1 MAAIPASGSLVATHDYYRRRIGSTSSSSSCGSSEYSGEVIPHHPGLPKQDSGHWWSSFFFGKQNLPGMGTVaEEAQQKSG 80
Cdd:pfam15060   1 MAAIPSSGSLVATHDYYRRRLGSTSSNSSCGSAEYPGEVIPHHPGLPKADPGHWWASFFFGKSNLPFMATV-LESPEHSG 79

                          90       100       110
                  ....*....|....*....|....*....|.
gi 41152388    81 VVSVTNGQVTCVAREMVMR-----QASESSD 106
Cdd:pfam15060  80 SPQASSGMITCDLAQEAMRkqpgsQPSKTSA 110
 
Name Accession Description Interval E-value
PPDFL pfam15060
Differentiation and proliferation regulator; Pancreatic progenitor cell differentiation and ...
 1-106 8.21e-50

Differentiation and proliferation regulator; Pancreatic progenitor cell differentiation and proliferation factor-like protein (PPDFL) is alternatively named Exocrine differentiation and proliferation factor-like protein. PPDFL regulates exocrine cell fate. This protein is highly expressed in exocrine progenitor cells which eventually differentiate to form exocrine pancreatic cells.


Pssm-ID: 464477  Cd Length: 110  Bit Score: 153.87  E-value: 8.21e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152388     1 MAAIPASGSLVATHDYYRRRIGSTSSSSSCGSSEYSGEVIPHHPGLPKQDSGHWWSSFFFGKQNLPGMGTVaEEAQQKSG 80
Cdd:pfam15060   1 MAAIPSSGSLVATHDYYRRRLGSTSSNSSCGSAEYPGEVIPHHPGLPKADPGHWWASFFFGKSNLPFMATV-LESPEHSG 79

                          90       100       110
                  ....*....|....*....|....*....|.
gi 41152388    81 VVSVTNGQVTCVAREMVMR-----QASESSD 106
Cdd:pfam15060  80 SPQASSGMITCDLAQEAMRkqpgsQPSKTSA 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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