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Conserved domains on  [gi|46402251|ref|NP_997132|]
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olfactory receptor family 56 subfamily A member 4 [Mus musculus]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
27-305 4.45e-119

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15223:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 279  Bit Score: 343.51  E-value: 4.45e-119
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  27 HWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVM 106
Cdd:cd15223   1 HWLSLPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 107 NSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSV 186
Cdd:cd15223  81 HFFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 187 SRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLA 266
Cdd:cd15223 161 VSLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRF 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 46402251 267 RERIPPDIPILLNILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15223 241 GKTIPPDVHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
 
Name Accession Description Interval E-value
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
27-305 4.45e-119

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 343.51  E-value: 4.45e-119
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  27 HWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVM 106
Cdd:cd15223   1 HWLSLPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 107 NSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSV 186
Cdd:cd15223  81 HFFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 187 SRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLA 266
Cdd:cd15223 161 VSLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRF 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 46402251 267 RERIPPDIPILLNILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15223 241 GKTIPPDVHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
44-309 1.23e-62

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 199.65  E-value: 1.23e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251    44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:pfam13853  12 NGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLLAMAVD 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251   124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:pfam13853  92 RFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCADIKVNNIYGLF 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251   204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPILLNILHH 283
Cdd:pfam13853 172 VVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPPLLQIMMANAYL 251
                         250       260
                  ....*....|....*....|....*.
gi 46402251   284 LIPPALNPIVYGVRTREIKQGIQNLL 309
Cdd:pfam13853 252 FFPPVLNPIVYSVKTKQIRDCVKRML 277
 
Name Accession Description Interval E-value
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
27-305 4.45e-119

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 343.51  E-value: 4.45e-119
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  27 HWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVM 106
Cdd:cd15223   1 HWLSLPFLLLYLVALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 107 NSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSV 186
Cdd:cd15223  81 HFFTAMESSILLVMALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSNVIEHCYCDHMAL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 187 SRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLA 266
Cdd:cd15223 161 VSLACGDTTINSIYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYTAVLVSSLTYRF 240
                       250       260       270
                ....*....|....*....|....*....|....*....
gi 46402251 267 RERIPPDIPILLNILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15223 241 GKTIPPDVHVLLSVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
27-301 1.55e-95

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 283.80  E-value: 1.55e-95
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  27 HWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVM 106
Cdd:cd15917   1 IWLSIPFCAMYLVALLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 107 NSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSV 186
Cdd:cd15917  81 HSFTAMESGVLLAMAFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNVISHSYCEHMAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 187 SRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLA 266
Cdd:cd15917 161 VKLACGDTRVNSIYGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRF 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46402251 267 RERIPPDIPILLNILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15917 241 GHHVPPHVHILLANLYLLLPPMLNPIVYGVRTKQI 275
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
43-301 2.69e-81

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 247.18  E-value: 2.69e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15953  17 GNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIMESAVLVAMAF 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQL 202
Cdd:cd15953  97 DRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFCANRIIPHTYCEHMAVVKLACGDTTINRIYGL 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPILLNILH 282
Cdd:cd15953 177 VVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLTHRFGQGIAPHIHIILANLY 256
                       250
                ....*....|....*....
gi 46402251 283 HLIPPALNPIVYGVRTREI 301
Cdd:cd15953 257 LLVPPMLNPIIYGVKTKEI 275
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
40-301 1.14e-79

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 243.35  E-value: 1.14e-79
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15221  14 ALLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVTESAILLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKL 199
Cdd:cd15221  94 MAFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNVIPHTYCEHMGIARLACADITVNIW 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 200 YQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPILLN 279
Cdd:cd15221 174 YGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRFGRHIPRHVHILLA 253
                       250       260
                ....*....|....*....|..
gi 46402251 280 ILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15221 254 NLYVLVPPMLNPIVYGVKTKQI 275
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
27-301 6.28e-76

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 233.55  E-value: 6.28e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  27 HWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVM 106
Cdd:cd15222   1 HWISIPFCLLYLVALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 107 NSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSV 186
Cdd:cd15222  81 HTFSFMESSVLLAMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFCHSNVLSHSYCLHQDV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 187 SRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLA 266
Cdd:cd15222 161 MKLACSDTRVNSIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVPMIGLSMVHRF 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46402251 267 RERIPPDIPILLNILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15222 241 GKHASPLVHVLMANVYLLVPPVLNPIIYSVKTKQI 275
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
27-301 1.72e-74

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 229.93  E-value: 1.72e-74
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  27 HWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVM 106
Cdd:cd15951   1 VWISIPFCIMYAVALLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 107 NSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSV 186
Cdd:cd15951  81 HSFSTMESGIFVAMALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRTNIIPHTYCEHMAV 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 187 SRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLA 266
Cdd:cd15951 161 VKLACADTRVSRAYGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHRF 240
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46402251 267 RERIPPDIPILLNILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15951 241 GHNVPPHVHILIANVYLLVPPMLNPIIYGVRTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
40-301 1.57e-73

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 227.65  E-value: 1.57e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15952  14 ALLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGMESAVLVA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKL 199
Cdd:cd15952  94 MAFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGHNIIPHTYCEHMGIAKLACASIRINII 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 200 YQLVAgWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPILLN 279
Cdd:cd15952 174 YGLFA-ISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRFGHNIPRYIHILLA 252
                       250       260
                ....*....|....*....|..
gi 46402251 280 ILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15952 253 NLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
40-301 3.11e-73

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 226.91  E-value: 3.11e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15950  14 ALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTAVESGVLLA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKL 199
Cdd:cd15950  94 MAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCGSRVVPHSYCEHMAVVKLACADPRPSSL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 200 YQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPILLN 279
Cdd:cd15950 174 YSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYIPGLLSIYTQRFGQGVPPHTQVLLA 253
                       250       260
                ....*....|....*....|..
gi 46402251 280 ILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15950 254 DLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
28-302 8.76e-72

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 223.24  E-value: 8.76e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  28 WLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMN 107
Cdd:cd15948   3 WISIPFCSAFTVALLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLH 82
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 108 SFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVS 187
Cdd:cd15948  83 SFSIMESAVLLAMAFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCRSHVIAHCYCEHMAVV 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 188 RLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLAR 267
Cdd:cd15948 163 KLACGDTRFNNIYGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTPVVLSSTMHRFA 242
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46402251 268 ERIPPDIPILLNILHHLIPPALNPIVYGVRTREIK 302
Cdd:cd15948 243 RHVAPHVHILLANFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
12-302 1.30e-69

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 218.11  E-value: 1.30e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  12 SEFLLICFPNYQTWQHWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDN 91
Cdd:cd15949   2 STFILLGIPGLEPLHVWISIPFCSMYLIAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSS 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  92 KSIGFSSCFLQMFVMNSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYC 171
Cdd:cd15949  82 NEIPLHACLLQMFLIHSFSAIESGIFLAMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWY 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 172 AQNIIKNCICTNLSVSRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILIL 251
Cdd:cd15949 162 RTNIIAHSYCEHMAVVGLACGDVSINNHYGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCAIL 241
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|.
gi 46402251 252 FFSTVLLVLVITNLARERIPPDIPILLNILHHLIPPALNPIVYGVRTREIK 302
Cdd:cd15949 242 AFYVPIAVSSLIHRFGQNVPPPTHILLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
28-301 2.21e-63

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 201.63  E-value: 2.21e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  28 WLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMN 107
Cdd:cd15956   2 WLSLPFCFIYVLSLLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 108 SFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVS 187
Cdd:cd15956  82 AFSAMESGVLVAMALDRFVAICNPLHYATILTLEVVAKAGLLLALRGVAIVIPFPLLVCRLSFCASHTIAHTYCEHMAVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 188 RLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLAR 267
Cdd:cd15956 162 KLACGATTVDSLYGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYIPGLLSVLMHRFG 241
                       250       260       270
                ....*....|....*....|....*....|....
gi 46402251 268 ERIPPDIPILLNILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15956 242 HSVPSAAHVLLSNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
27-301 9.80e-63

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 199.99  E-value: 9.80e-63
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  27 HWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVM 106
Cdd:cd15955   1 HWIGIPFCIMFLLAVLGNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFI 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 107 NSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPIL-SARLKYCAQNIIKNCICTNLS 185
Cdd:cd15955  81 HTLQAFESGILLAMALDRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPLLiKLRLHHFRSTVISHSYCEHMA 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 186 VSRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNL 265
Cdd:cd15955 161 VVKLAADDVRVNKIYGLFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHR 240
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 46402251 266 ARERIPPDIPILLNILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15955 241 FGHHVAPYVHILLSNLYLLVPPVLNPIVYGVKTKQI 276
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
44-309 1.23e-62

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 199.65  E-value: 1.23e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251    44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:pfam13853  12 NGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLLAMAVD 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251   124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:pfam13853  92 RFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHVLSHSYCLHMGLARLSCADIKVNNIYGLF 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251   204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPILLNILHH 283
Cdd:pfam13853 172 VVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPPLLQIMMANAYL 251
                         250       260
                  ....*....|....*....|....*.
gi 46402251   284 LIPPALNPIVYGVRTREIKQGIQNLL 309
Cdd:pfam13853 252 FFPPVLNPIVYSVKTKQIRDCVKRML 277
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
28-301 2.62e-61

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 196.20  E-value: 2.62e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  28 WLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMN 107
Cdd:cd15954   2 WISIPFCFMYIIAMVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVH 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 108 SFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVS 187
Cdd:cd15954  82 TFTGMESGVLMLMALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYCRGNFIPHTYCDHMSVV 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 188 RLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILF-FSTVLLVLVITNLA 266
Cdd:cd15954 162 KLACANIRVDAIYGLMVALLIGGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVItYTPAFFTFFAHRFG 241
                       250       260       270
                ....*....|....*....|....*....|....*
gi 46402251 267 RERIPPDIPILLNILHHLIPPALNPIVYGVRTREI 301
Cdd:cd15954 242 GHHITPHIHIIMANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
43-297 4.35e-58

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 187.69  E-value: 4.35e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd13954  17 GNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLGGTECFLLAVMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQL 202
Cdd:cd13954  97 DRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGSNVINHFFCDIPPLLKLSCSDTSLNELVIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFI-LILFFSTVLLVLVITNLAReriPPDIPILLNIL 281
Cdd:cd13954 177 ILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTvVSLFYGTIIFMYVRPSSSY---SSDLDKVVSVF 253
                       250
                ....*....|....*.
gi 46402251 282 HHLIPPALNPIVYGVR 297
Cdd:cd13954 254 YTVVTPMLNPIIYSLR 269
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
44-305 6.07e-49

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 164.32  E-value: 6.07e-49
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15235  19 NLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNTDSFLLAVMAYD 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVR--AAIFIISrnALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQ 201
Cdd:cd15235  99 RYVAICHPLHYATVMSPKRCLLlvAGSWLLS--HLHSLLHTLLMSRLSFCGSNEIPHFFCDLQPLLKLSCSDTSLNELLI 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 202 LVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHF-ILILFFSTVLLV----LVITNLARERIppdipi 276
Cdd:cd15235 177 FTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLtVVALFYGTIIGVyfqpSSSYSADKDRV------ 250
                       250       260
                ....*....|....*....|....*....
gi 46402251 277 lLNILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15235 251 -ATVMYTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
40-297 6.12e-47

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 158.93  E-value: 6.12e-47
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15918  14 TVLGNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLDNFLLAV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQF--VVRAAIFIISrnALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLN 197
Cdd:cd15918  94 MAYDRYVAICHPLHYTTIMSPRLciLLVAASWVIT--NLHSLLHTLLMARLSFCASNEIPHFFCDLNPLLKLSCSDTHLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 198 KLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHF-ILILFFSTVLLVLVitnlarerIPPDI-- 274
Cdd:cd15918 172 ELVILVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLsVVSLFYGTVIGVYL--------SPPSShs 243
                       250       260
                ....*....|....*....|....*.
gi 46402251 275 ---PILLNILHHLIPPALNPIVYGVR 297
Cdd:cd15918 244 askDSVAAVMYTVVTPMLNPFIYSLR 269
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
40-297 2.54e-46

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 157.42  E-value: 2.54e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15232  14 ALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGSELLLLTA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKL 199
Cdd:cd15232  94 MAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNIINHFFCEIPPLLLLSCSDTSLNEI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 200 YQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLAREripPDIPILL 278
Cdd:cd15232 174 MAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVsLYYSTVIYTYIRPSSSYS---PEKDKVV 250
                       250
                ....*....|....*....
gi 46402251 279 NILHHLIPPALNPIVYGVR 297
Cdd:cd15232 251 AVLYSVVTPTLNPLIYSLR 269
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
40-305 5.37e-46

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 156.66  E-value: 5.37e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15231  14 TLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFVGTECLLLAV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKL 199
Cdd:cd15231  94 MAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCGSNQISHFFCDIPPLLKLSCSDTSLNEV 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 200 YQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFIL-ILFFSTVLLVLvitNLARERIPPDIPILL 278
Cdd:cd15231 174 LLLVASVFIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVvTLFYGTAIFNY---NRPSSGYSLDKDTLI 250
                       250       260
                ....*....|....*....|....*..
gi 46402251 279 NILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15231 251 SVLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
41-307 5.74e-46

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 156.79  E-value: 5.74e-46
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  41 MGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVM 120
Cdd:cd15412  15 LLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEYYMLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 121 AYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDiTLNKLY 200
Cdd:cd15412  95 AYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSNVINHFYCADPPLIKLSCSD-TYVKET 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QL--VAGWTLLGSdLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPIll 278
Cdd:cd15412 174 AMfiVAGFNLSSS-LLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSEESVEQSKIV-- 250
                       250       260
                ....*....|....*....|....*....
gi 46402251 279 NILHHLIPPALNPIVYGVRTREIKQGIQN 307
Cdd:cd15412 251 AVFYTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
43-302 7.54e-45

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 153.76  E-value: 7.54e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15225  17 GNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLAAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQL 202
Cdd:cd15225  97 DRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGSNEINHFFCDIPPVLKLACADTSLNEIAIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLILIVLSYSFIFRVVLRIK-AEGAvAKALSTCGSHFI-LILFFSTVLLVLVITNLAREripPDIPILLNI 280
Cdd:cd15225 177 VASVLVILVPFLLILVSYIFIISTILKIPsAEGR-RKAFSTCSSHLIvVTLFYGCASFTYLRPKSSYS---PETDKLLSL 252
                       250       260
                ....*....|....*....|..
gi 46402251 281 LHHLIPPALNPIVYGVRTREIK 302
Cdd:cd15225 253 FYTVVTPMLNPIIYSLRNKEVK 274
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
44-306 1.76e-43

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 150.25  E-value: 1.76e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15409  18 NLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTECFLLAAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15409  98 RYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSNEINHFFCDIPPLLKISCTDPSINELVLFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLARERippDIPILLNILH 282
Cdd:cd15409 178 FSGSIQVFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVsLFYGSLFFMYVRPSSLYAL---DQDMMDSLFY 254
                       250       260
                ....*....|....*....|....
gi 46402251 283 HLIPPALNPIVYGVRTREIKQGIQ 306
Cdd:cd15409 255 TIVIPLLNPFIYSLRNKEVIDALR 278
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
44-297 6.57e-43

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 148.42  E-value: 6.57e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15230  18 NLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTTECFLLAAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVR--AAIFIISrnALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQ 201
Cdd:cd15230  98 RYVAICNPLLYTVIMSKRVCIQlvAGSYLCG--FVNSIVHTSSTFSLSFCGSNVINHFFCDIPPLLKLSCSDTHINELVL 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 202 LVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLAReriPPDIPILLNI 280
Cdd:cd15230 176 FAFSGFIGLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHLTAVsLFYGTLIFMYLRPSSSY---SLDQDKVVSV 252
                       250
                ....*....|....*..
gi 46402251 281 LHHLIPPALNPIVYGVR 297
Cdd:cd15230 253 FYTVVIPMLNPLIYSLR 269
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
43-302 1.80e-42

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 147.47  E-value: 1.80e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15420  17 GNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECVLLAVMSY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQL 202
Cdd:cd15420  97 DRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCGPNEVNHFFCEILAVLKLACADTWINEILIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLAReriPPDIPILLNIL 281
Cdd:cd15420 177 AGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVgLFYGTAMFMYMVPGSSN---SAEQEKILSLF 253
                       250       260
                ....*....|....*....|.
gi 46402251 282 HHLIPPALNPIVYGVRTREIK 302
Cdd:cd15420 254 YSLFNPMLNPLIYSLRNKQVK 274
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
44-297 2.21e-42

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 147.13  E-value: 2.21e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15430  18 NGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECVLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15430  98 RYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNVINHFTCEILAVLKLACVDISLNEIIMLV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHF-ILILFFSTVLLVLVITNLARERIppdIPILLNILH 282
Cdd:cd15430 178 GNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLtVVIIFYGTILFMYMKPKSKNAQI---SDKLITLFY 254
                       250
                ....*....|....*
gi 46402251 283 HLIPPALNPIVYGVR 297
Cdd:cd15430 255 GVVTPMLNPIIYSLR 269
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
44-302 2.38e-42

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 147.16  E-value: 2.38e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15429  18 NFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALGGTEFILLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15429  98 RYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNTINHFSCELLAVVRLACVDTSLNEVAILV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHF-ILILFFSTVLLVLVitnLARERIPPDIPILLNILH 282
Cdd:cd15429 178 SSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLtVVSLCYGTAIFTYM---RPRSGSSALQEKMISLFY 254
                       250       260
                ....*....|....*....|
gi 46402251 283 HLIPPALNPIVYGVRTREIK 302
Cdd:cd15429 255 AVVTPMLNPLIYSLRNKEVK 274
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
44-311 3.46e-42

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 147.08  E-value: 3.46e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15411  18 NLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATTECFLLGLMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15411  98 RYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFCGSNVINHFFCDTPPLLKLSCSDTHVNEMLIFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 -AGWTLLGSdLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHF-ILILFFSTvllvLVITNL-ARERIPPDIPILLNI 280
Cdd:cd15411 178 lAGLTLVGS-LLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLtAVTIFYGT----GIFTYLrPSSSYSLGQDKVASV 252
                       250       260       270
                ....*....|....*....|....*....|.
gi 46402251 281 LHHLIPPALNPIVYGVRTREIKqgiqNLLRR 311
Cdd:cd15411 253 FYTVVIPMLNPLIYSLRNKEVK----NALRR 279
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
44-309 1.00e-41

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 146.26  E-value: 1.00e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15410  31 NLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKAISYSGCMLQFFFFCTFVVTESFLLAVMAYD 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15410 111 RYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCGSNVINHFFCDLPPLLSLSCSDTYLNELLLFI 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLARERippDIPILLNILH 282
Cdd:cd15410 191 FGSLNEASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAItIFHGTILFMYCRPSSSYSL---DTDKVASVFY 267
                       250       260
                ....*....|....*....|....*..
gi 46402251 283 HLIPPALNPIVYGVRTREIKQGIQNLL 309
Cdd:cd15410 268 TVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
40-302 1.65e-41

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 145.00  E-value: 1.65e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVmnsFLTM---ESCT 116
Cdd:cd15421  14 ALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFF---FLTLggaECLL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 117 FMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITL 196
Cdd:cd15421  91 LALMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGSREIHHFFCEVPALLKLSCADTSA 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 197 NKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFI-LILFFSTVLLVLVITNLAReriPPDIP 275
Cdd:cd15421 171 YETVVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTvVSLYYGPAIFTYMRPGSYH---SPEQD 247
                       250       260
                ....*....|....*....|....*..
gi 46402251 276 ILLNILHHLIPPALNPIVYGVRTREIK 302
Cdd:cd15421 248 KVVSVFYTILTPMLNPLIYSLRNKEVL 274
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
44-297 1.89e-41

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 144.82  E-value: 1.89e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15914  18 NLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFHSLGITECYLLTAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15914  98 RYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQIQHIFCDFPPLLSLACTDTSLNVLVDFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFIL-ILFFSTVLLVLVitnLARERIPPDIPILLNILH 282
Cdd:cd15914 178 IHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVvLLFFGSVSFMYL---RLSKSYSLDYDRAIAVVY 254
                       250
                ....*....|....*
gi 46402251 283 HLIPPALNPIVYGVR 297
Cdd:cd15914 255 AVLTPFFNPIIYSLR 269
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
14-303 2.49e-41

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 144.89  E-value: 2.49e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  14 FLLICFPNYQTWQHWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKS 93
Cdd:cd15945   1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  94 IGFSSCFLQMFVMNSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQ---FVVRAAIFIISRNALISLpvpILSARLKY 170
Cdd:cd15945  81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRvcyLLLVGAYLSGMATSLVHT---TLTFRLSF 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 171 CAQNIIKNCICTNLSVSRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI 250
Cdd:cd15945 158 CGSNTINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHLTAV 237
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 46402251 251 LFFSTVLLVLVITnlARERIPPDIPILLNILHHLIPPALNPIVYGVRTREIKQ 303
Cdd:cd15945 238 GLFYGTLLFMYLR--PSSSYSLDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKE 288
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
44-309 2.85e-41

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 144.81  E-value: 2.85e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15943  32 NLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENKTISFTGCAAQMYFFVAFATTECFLLAVMAYD 111
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVR--AAIFIIS-RNALISLpvpILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15943 112 RYVAICNPLLYTVIMSPRVCIQlvAGSYLIGfVNALIQT---ICTFRLPFCGSNVINHFFCDVPPLLKLSCSDTHVNEIV 188
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLAREripPDIPILLN 279
Cdd:cd15943 189 LFAFAIFLGIFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASHLMAVtIFYGTTLFMYLRPSSSYS---LDQDKVVS 265
                       250       260       270
                ....*....|....*....|....*....|
gi 46402251 280 ILHHLIPPALNPIVYGVRTREIKQGIQNLL 309
Cdd:cd15943 266 VFYTVVIPMLNPLIYSLRNKEVKDALRRIL 295
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
43-297 5.09e-41

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 143.57  E-value: 5.09e-41
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15237  17 GNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVTECVLLAVMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQL 202
Cdd:cd15237  97 DRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPNHINHFFCEAPAVLKLACADTSLNEAVIF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFIL-ILFFSTVLLVLVITNlarERIPPDIPILLNIL 281
Cdd:cd15237 177 VTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVvTLFYGTAIFMYMRPH---STHSPDQDKMISVF 253
                       250
                ....*....|....*.
gi 46402251 282 HHLIPPALNPIVYGVR 297
Cdd:cd15237 254 YTIVTPMLNPLIYSLR 269
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
44-302 1.49e-40

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 142.85  E-value: 1.49e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15408  31 NLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKVISFTGCLTQLYFYAVFATTECYLLAAMAYD 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNK-LYQL 202
Cdd:cd15408 111 RYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGSNVINHFFCDGPPLLALSCSDTSLNEmLLFA 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLIlIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVitnLARERIPPDIPILLNIL 281
Cdd:cd15408 191 FVGFNVLTTTLV-ILISYTYILATILRMRSAEGRHKAFSTCASHLTAVtLFYGSLAFMYL---RPSSRYSLDLDKVASVF 266
                       250       260
                ....*....|....*....|.
gi 46402251 282 HHLIPPALNPIVYGVRTREIK 302
Cdd:cd15408 267 YTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
44-302 1.86e-40

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 142.35  E-value: 1.86e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15229  18 NLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFLLSAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15229  98 RYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGPNEINHFSCELPSLLPLSCSDTFANKMVLLT 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFI-LILFFSTVLLVLVITNLAReriPPDIPILLNILH 282
Cdd:cd15229 178 SSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTvVGLFYGTGFFRYLRPNSAS---SSVLDRVFSIQY 254
                       250       260
                ....*....|....*....|
gi 46402251 283 HLIPPALNPIVYGVRTREIK 302
Cdd:cd15229 255 SILTPMLNPIIYSLKNKEVK 274
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
44-297 3.35e-40

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 141.27  E-value: 3.35e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15224  18 NLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTECVLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15224  98 RYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNVINHFFCDISPLLNLSCTDMSLAELVDFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHF-ILILFFSTVLLVlvitnLARERIPP--DIPILLNI 280
Cdd:cd15224 178 LALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLtVVIIFYSATLFM-----YARPKAISsfDSNKLVSV 252
                       250
                ....*....|....*..
gi 46402251 281 LHHLIPPALNPIVYGVR 297
Cdd:cd15224 253 LYTVVTPLLNPIIYCLR 269
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
44-297 3.50e-40

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 141.47  E-value: 3.50e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15912  18 NLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLGTTEFFLLAVMSFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15912  98 RYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNVINHFFCDSGPLLKLSCSDTRLIELLDFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNlarERIPPDIPILLNILH 282
Cdd:cd15912 178 LASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVsIFYGSCIFMYVRPS---QSSSLDLNKVVALLN 254
                       250
                ....*....|....*
gi 46402251 283 HLIPPALNPIVYGVR 297
Cdd:cd15912 255 TVVTPLLNPFIYTLR 269
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
44-311 8.61e-40

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 140.47  E-value: 8.61e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15417  18 NLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFLLAAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15417  98 RYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNVIDHFFCDIPPLLSLSCSDTFISQVVLFL 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFI-LILFFSTVLLVLVITNLARERippDIPILLNILH 282
Cdd:cd15417 178 VAVLFGVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHLTaVTLFYGTGLFVYLRPSSSHSQ---DQDKVASVFY 254
                       250       260
                ....*....|....*....|....*....
gi 46402251 283 HLIPPALNPIVYGVRTREIKqgiqNLLRR 311
Cdd:cd15417 255 TVVIPMLNPLIYSLRNKEIK----DALKR 279
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
44-297 9.22e-40

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 140.44  E-value: 9.22e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15431  18 NGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGITECLLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLpVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15431  98 RFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTV-IPVLTMPLHFCGPNVINHFFCEVQALLKLACSDTSLNEILMFA 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVitnLARERIPPDIPILLNILH 282
Cdd:cd15431 177 TSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVtIFYGTAIFMYL---RPQSKSSSDQDKIISVFY 253
                       250
                ....*....|....*
gi 46402251 283 HLIPPALNPIVYGVR 297
Cdd:cd15431 254 GVVTPMLNPLIYSLR 268
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
44-306 1.37e-39

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 140.14  E-value: 1.37e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15419  18 NIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTTEGFLLAAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15419  98 RFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCGSNEIDHFFCDVPPLLKLSCSDTFINELVMFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLV----ITNLARERIppdipilL 278
Cdd:cd15419 178 LCGLIIVSTILVILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVsLFYGTVFFMYAqpgaVSSPEQSKV-------V 250
                       250       260
                ....*....|....*....|....*...
gi 46402251 279 NILHHLIPPALNPIVYGVRTREIKQGIQ 306
Cdd:cd15419 251 SVFYTLVIPMLNPLIYSLRNKDVKEALK 278
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
44-305 4.18e-39

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 138.67  E-value: 4.18e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15434  18 NTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGLGGTECVLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQF---VVRAAIFIISRNALISLPvpiLSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15434  98 RYAAVCQPLHYTVVMHPRLcwkLVAMSWLIGFGNSLVLSP---LTLSLPRCGHHRVDHFFCEMPALIKLACVDTTAYEAT 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVitnLARERIPPDIPILLN 279
Cdd:cd15434 175 IFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVsLFYGTIIYMYL---QPKNSVSQDQGKFLT 251
                       250       260
                ....*....|....*....|....*.
gi 46402251 280 ILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15434 252 LFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
41-297 9.39e-38

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 134.92  E-value: 9.39e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  41 MGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVM 120
Cdd:cd15911  15 MAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAATECYLLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 121 AYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15911  95 SYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCGPNEIDHFFCDFAPLLKLSCSDTSLVELV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLAReriPPDIPILLN 279
Cdd:cd15911 175 TFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVtIFYGTLIIVYVVPSTNT---SRDLNKVFS 251
                       250
                ....*....|....*...
gi 46402251 280 ILHHLIPPALNPIVYGVR 297
Cdd:cd15911 252 LFYTVLTPLVNPLIYSLR 269
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
44-297 2.23e-37

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 133.97  E-value: 2.23e-37
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15915  18 NGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEAMLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLN-KLYQL 202
Cdd:cd15915  98 RYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNKINHFFCDIKPLLKLACGDTSLNlWLLNI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSdLILIVLSYSFIFRVVLRI-KAEGAVAKALSTCGSHF-ILILFFSTVLLVLVI----TNLARERIPpdipi 276
Cdd:cd15915 178 VTGSIALGT-FILTLLSYIYIISFLLLKvRSKEGRHKAFSTCASHLtVVLLLYGPALFTYIRpssgDSLEQDRIV----- 251
                       250       260
                ....*....|....*....|.
gi 46402251 277 llNILHHLIPPALNPIVYGVR 297
Cdd:cd15915 252 --ALLYTVVTPVLNPLIYTLR 270
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
44-307 1.08e-36

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 132.54  E-value: 1.08e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15407  18 NLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATVENFLLASMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFvvrAAIFIISRNALISLPVPILSA---RLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15407  98 RHAAVCKPLHYTTTMTTKV---CACLTIGCYVCGFLNASIHTGntfRLSFCKSNVINHFFCDIPPVLALSCSDIHISEIV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDipILLNI 280
Cdd:cd15407 175 LFFLASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSSHSMDTD--KMASV 252
                       250       260
                ....*....|....*....|....*..
gi 46402251 281 LHHLIPPALNPIVYGVRTREIKQGIQN 307
Cdd:cd15407 253 FYTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
44-302 2.00e-36

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 131.80  E-value: 2.00e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFW-FDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15916  18 NLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLePGGKVISFGGCVAQLYFFHFLGSTECFLYTLMAY 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQL 202
Cdd:cd15916  98 DRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNRIDYFFCDIPPLLKLACADTTINELVIF 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPILLNIlh 282
Cdd:cd15916 178 ASIGVVALGCFILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGSKEALDGVIAVFYTV-- 255
                       250       260
                ....*....|....*....|
gi 46402251 283 hlIPPALNPIVYGVRTREIK 302
Cdd:cd15916 256 --VTPLLNPLIYTLRNKEVK 273
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
44-297 2.16e-36

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 131.59  E-value: 2.16e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15947  18 NTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTECVLLAVMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15947  98 RYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHTLDHFFCEVPALIKLACVDTTFNELELFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFI-LILFFSTVLLVLVitnLARERIPPDIPILLNILH 282
Cdd:cd15947 178 ASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLvVSLFYGTAIYMYL---QPPSSYSQDQGKFISLFY 254
                       250
                ....*....|....*
gi 46402251 283 HLIPPALNPIVYGVR 297
Cdd:cd15947 255 TVVTPTLNPLIYTLR 269
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
47-303 2.53e-36

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 131.55  E-value: 2.53e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  47 LLI--TIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYDR 124
Cdd:cd15234  19 LLIilAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLDNFLLAVMAYDR 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 125 YVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLVA 204
Cdd:cd15234  99 YVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCTDVEIPHFFCELAQVLKLACSDTLINNILIYLA 178
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 205 GWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLV---LVITNLARERIPpdipilLNI 280
Cdd:cd15234 179 TVIFGGIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVsLFYGTGLGVyisSAVTHSSRKTAV------ASV 252
                       250       260
                ....*....|....*....|...
gi 46402251 281 LHHLIPPALNPIVYGVRTREIKQ 303
Cdd:cd15234 253 MYTVVTPMLNPFIYSLRNKDMKG 275
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
44-305 2.57e-36

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 131.43  E-value: 2.57e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15236  18 NLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSFLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQ---FVVRAAIFIISRNALISlpvPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15236  98 RYVAICHPLHYTAIMRPElcvLLVAGSWVLTCFHALLH---TLLLARLSFCADNVIPHFFCDLVALLKLSCSSTSLNELV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSH-FILILFFSTVLLVLVITNLARERippDIPILLN 279
Cdd:cd15236 175 IFTEGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHlSVVFLYYGTIIGVYFFPSSNNSS---DKDIVAS 251
                       250       260
                ....*....|....*....|....*.
gi 46402251 280 ILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15236 252 VMYTVVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
44-302 8.50e-36

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 130.18  E-value: 8.50e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15416  18 NLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECFLLAAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15416  98 RYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPNEINHFFCDFPPLLKLSCSDIRLAKILPSI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFI-LILFFSTVLLVLVITNlarERIPPDIPILLNILH 282
Cdd:cd15416 178 SSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTaVTLFYGTITFIYVMPN---SSYSMDQNKVVSVFY 254
                       250       260
                ....*....|....*....|
gi 46402251 283 HLIPPALNPIVYGVRTREIK 302
Cdd:cd15416 255 MVVIPMLNPLIYSLRNKEVK 274
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
44-303 1.12e-35

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 129.86  E-value: 1.12e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15424  18 NLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECLLLGAMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15424  98 RYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNHINHFFCELPVVLKLACADTHITEAIVFG 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVItnlARERIPPDIPILLNILH 282
Cdd:cd15424 178 AGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVtLFYGTVISMYMR---PRSGSTPDRDKQIAVFY 254
                       250       260
                ....*....|....*....|.
gi 46402251 283 HLIPPALNPIVYGVRTREIKQ 303
Cdd:cd15424 255 IVITPLLNPIIYTLRNKDVHG 275
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
44-297 2.27e-35

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 128.75  E-value: 2.27e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15946  18 NGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGITECTLFSVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15946  98 RYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPNEINHYFCEVPAVLKLACADTSLNEMVDFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVI---TNLARERIPPdipilLNI 280
Cdd:cd15946 178 LGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMrpgSNYSPERDKK-----ISL 252
                       250
                ....*....|....*..
gi 46402251 281 LHHLIPPALNPIVYGVR 297
Cdd:cd15946 253 FYNVFTALLNPVIYSLR 269
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
43-306 8.32e-35

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 127.44  E-value: 8.32e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15413  17 GNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIISELFLLSAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQL 202
Cdd:cd15413  97 DRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNVINHFYCDDLPLLALSCSDTHEKELIIL 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 V-AGWTLLGSDLILIVlSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIppDIPILLNIL 281
Cdd:cd15413 177 IfAGFNLISSLLIVLV-SYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKSSHSL--DTDKMASVF 253
                       250       260
                ....*....|....*....|....*
gi 46402251 282 HHLIPPALNPIVYGVRTREIKQGIQ 306
Cdd:cd15413 254 YTLVIPMLNPLIYSLRNKEVKDALK 278
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
44-306 8.76e-35

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 127.53  E-value: 8.76e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15415  18 NLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTTEGFLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15415  98 RYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNVINHYFCDIPPLLKLSCSDTHINELLLLT 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLV----ITNLARERIppdipilL 278
Cdd:cd15415 178 FSGVIAMSTLLTIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVtLFYGSVSFSYIqpssQYSLEQEKV-------S 250
                       250       260
                ....*....|....*....|....*...
gi 46402251 279 NILHHLIPPALNPIVYGVRTREIKQGIQ 306
Cdd:cd15415 251 AVFYTLVIPMLNPLIYSLRNKDVKDALK 278
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
47-297 1.01e-34

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 127.18  E-value: 1.01e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  47 LLI--TIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYDR 124
Cdd:cd15227  19 LLIitVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASELALLTVMAYDR 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 125 YVAICKPLQYPTVITDQFVVRAAIFIIsrnaLISLPVPILSA----RLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15227  99 YVAICHPLHYEVIMNRGACVQMAAASW----LSGLLYGALHTantfSLPFCGSNVIHQFFCDIPQLLKLSCSDTYLNEIG 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFI-LILFFSTVLLVLVITnlaRERIPPDIPILLN 279
Cdd:cd15227 175 VLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIvVSLFLSTGSFAYLKP---PSDSPSLLDLLLS 251
                       250
                ....*....|....*...
gi 46402251 280 ILHHLIPPALNPIVYGVR 297
Cdd:cd15227 252 VFYSVVPPTLNPIIYSLR 269
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
44-309 1.53e-34

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 127.10  E-value: 1.53e-34
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15406  27 NLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIAECYMLTAMAYD 106
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQ--FVVRAAIFIISrnALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQ 201
Cdd:cd15406 107 RYVAICNPLLYNVTMSPRvcSLLVAGVYIMG--LIGATVHTSCMLRLSFCGDNVINHYFCDILPLLKLSCSSTYINELLL 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 202 LVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHF--ILILFFSTVLLVL---VITNLARERIPpdipi 276
Cdd:cd15406 185 FIVGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLaaVGVFYGSIIFMYLkpsSSSSMTQEKVS----- 259
                       250       260       270
                ....*....|....*....|....*....|...
gi 46402251 277 llNILHHLIPPALNPIVYGVRTREIKQGIQNLL 309
Cdd:cd15406 260 --SVFYTTVIPMLNPLIYSLRNKDVKNALKKVL 290
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
41-311 1.94e-33

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 124.08  E-value: 1.94e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  41 MGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVM 120
Cdd:cd15414  15 LLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGLFVAAECFLLASM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 121 AYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15414  95 AYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNVINHFFCDIPPLLSLSCADTQINKWV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFI-LILFFSTVLLVLVITNlarERIPPDIPILLN 279
Cdd:cd15414 175 LFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTaVSILYGTLFFIYVRPS---SSSSLDLDKVVS 251
                       250       260       270
                ....*....|....*....|....*....|..
gi 46402251 280 ILHHLIPPALNPIVYGVRTREIKQGIQNLLRR 311
Cdd:cd15414 252 VFYTAVIPMLNPLIYSLRNKEVKDALRRTIRR 283
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
40-302 2.45e-33

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 123.74  E-value: 2.45e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15428  14 TVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSFGITECALLSV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKL 199
Cdd:cd15428  94 MSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNKINHFLCEMPALLKLASTDTHQAEM 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 200 YQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITnlARERIPPDIPILLN 279
Cdd:cd15428 174 AMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMR--PKSSTSKEYDKMIS 251
                       250       260
                ....*....|....*....|...
gi 46402251 280 ILHHLIPPALNPIVYGVRTREIK 302
Cdd:cd15428 252 VFYIIVTPMLNPLIYSLRNKEVK 274
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
44-297 2.71e-33

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 123.32  E-value: 2.71e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15940  18 NILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIFLLTIMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15940  98 RYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPNEIDSFFCDVPPVIKLACTDTYLIDILIVS 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAvAKALSTCGSHFILI-LFFSTVLLVlvitnLARERIPPDIPILLNILH 282
Cdd:cd15940 178 NSGLISLVCFVALLGSYIVILVSLRKRSTEGR-RKALSTCASHLTVVtLFFGPCIFI-----YTRPSTSFSEDKVVSVFY 251
                       250
                ....*....|....*
gi 46402251 283 HLIPPALNPIVYGVR 297
Cdd:cd15940 252 TVVTPLLNPIIYTLR 266
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
44-297 4.57e-33

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 122.81  E-value: 4.57e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15913  18 NGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTTECFFLSVMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15913  98 RYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNIIDHFLCDPGPLLALSCVPAPGTELICYT 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLArerIPPDIPILLNILH 282
Cdd:cd15913 178 LSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVsLFYGSVMVMYVSPGSG---NSTGMQKIVTLFY 254
                       250
                ....*....|....*
gi 46402251 283 HLIPPALNPIVYGVR 297
Cdd:cd15913 255 SVVTPLLNPLIYSLR 269
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
44-309 4.59e-33

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 123.36  E-value: 4.59e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15944  31 NLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKVISFSGCATQFAFFVGFVDAECYVLAAMAYD 110
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVR--AAIFIISRNALISLPVPILSarLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQ 201
Cdd:cd15944 111 RYVAICNPLLYSTLMSKRVCLQlmAGSYLAGLVNLVIHTTATFS--LSFCGSNIINHFFCDVPPLLALSCSDTHINEILL 188
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 202 LVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVitnLARERIPPDIPILLNI 280
Cdd:cd15944 189 YVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTGVtLFYGTVIFMYL---RPTSVYSLDQDKWASV 265
                       250       260
                ....*....|....*....|....*....
gi 46402251 281 LHHLIPPALNPIVYGVRTREIKQGIQNLL 309
Cdd:cd15944 266 FYTVVIPMLNPLIYSLRNKDVKEAFKKLI 294
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
44-305 1.41e-32

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 121.82  E-value: 1.41e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15432  18 NLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTECVLLAVMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15432  98 RFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGRRRVDHFFCEVPALLKLSCVDTTANEAELFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVitnlareRIPPDIPI----LL 278
Cdd:cd15432 178 ISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVsLFYGTAISMYL-------QPPSNSSHdrgkMV 250
                       250       260
                ....*....|....*....|....*..
gi 46402251 279 NILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15432 251 ALFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
44-302 3.49e-32

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 120.62  E-value: 3.49e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15942  18 NSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCAECFLYTVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15942  98 RFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKNEVDYIFCDIPAMLKLACADTAFNELVTFI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFstvlLVLVITNLARERIPPDIPILLNILHH 283
Cdd:cd15942 178 DIGLVAMTCFLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIY----YVPLTFIYLRPGSQDPLDGVVAVFYT 253
                       250
                ....*....|....*....
gi 46402251 284 LIPPALNPIVYGVRTREIK 302
Cdd:cd15942 254 TVTPLLNPVIYTLRNKEMK 272
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
44-308 3.73e-31

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 117.96  E-value: 3.73e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15418  19 NLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSECFLLAAMAYD 98
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDItlnKLYQLV 203
Cdd:cd15418  99 RYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCGDNIIDHFFCDLPPLVKLACDDT---RVYELI 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTL---LGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLlvLVITNLARERIPPDIPILLNI 280
Cdd:cd15418 176 LYFILgfnVIAPTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSI--LFIYSRPSSSHTPDRDKVVAL 253
                       250       260
                ....*....|....*....|....*...
gi 46402251 281 LHHLIPPALNPIVYGVRTREIKQGIQNL 308
Cdd:cd15418 254 FYTVVNPLLNPLIYSLRNKDVKEALKKL 281
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
43-302 7.00e-31

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 117.13  E-value: 7.00e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15405  17 GNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFFVISECYVLTAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQ--FVVRAAIFIISRNALISLPVPILsaRLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15405  97 DRYVAICNPLLYTVTMSPQvcSLLMLGSYVMGFAGAMAHTGCML--RLTFCDSNIINHYMCDILPLLQLSCTSTYVNELV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLAReriPPDIPILLN 279
Cdd:cd15405 175 VFVVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVsLFFGSGAFMYLKPSSVG---SVNQGKVSS 251
                       250       260
                ....*....|....*....|...
gi 46402251 280 ILHHLIPPALNPIVYGVRTREIK 302
Cdd:cd15405 252 VFYTNVVPMLNPLIYSLRNKDVK 274
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
44-302 1.03e-30

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 116.76  E-value: 1.03e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15228  18 NLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLGSTECLLYTVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAI---FIISRNALIslpVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15228  98 RYVAICHPLRYLLIMNRRVCALLAAgtwITSSFHATI---LTSLTFTLPYCGSNVVDYFFCDIFPVLKLACADTSIAETV 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLARERIPPdipilLN 279
Cdd:cd15228 175 SFTNVGLVPLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVtLFFGPCALIYTQPTPSPVLVTP-----VQ 249
                       250       260
                ....*....|....*....|...
gi 46402251 280 ILHHLIPPALNPIVYGVRTREIK 302
Cdd:cd15228 250 IFNNVVTPMLNPLIYTLRNKEVK 272
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
44-297 1.07e-30

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 116.15  E-value: 1.07e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15226  18 NLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGSEMVLLIAMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQ-----FVVRAAIFIISRNALISLPVPilsarLKYCAQNIIKNCICTNLSVSRLSCDDI-TLN 197
Cdd:cd15226  98 RYVAICKPLHYLTIMSPRmcillVVASWIIGFIHSLSQLAFVVN-----LPFCGPNVVDSFFCDLPLVIKLACTDTyVLE 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 198 KLYQLVAGWTLLGSDLILIVlSYSFIFrVVLRIKAEGAVAKALSTCGSHFIL-ILFFSTVLLVLVitnlareRIPPDIPI 276
Cdd:cd15226 173 LMVVANSGLISLVCFLLLLI-SYIVIL-VTVRKHSSGGSSKALSTCSAHITVvVLFFGPCIFIYV-------WPFSTFPV 243
                       250       260
                ....*....|....*....|...
gi 46402251 277 --LLNILHHLIPPALNPIVYGVR 297
Cdd:cd15226 244 dkFLAVFYTVITPLLNPIIYTLR 266
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
40-302 1.04e-29

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 114.12  E-value: 1.04e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15233  14 TIGGNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGADCFLLTA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVI---TDQFVVRAAIFIISRNALISlpvPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITL 196
Cdd:cd15233  94 MAYDRYLAICQPLTYSVRMswrVQTALVGISCACAFTNALTH---TVAMSTLKFCGPNVINHFFCDLPPLFQLSCSSTHL 170
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 197 NKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILI-LFFSTVLLVLVITNLARERippDIP 275
Cdd:cd15233 171 NELLLFVFAFFMALAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVcIFYGTGVFSYMRLGSVYSS---DKD 247
                       250       260
                ....*....|....*....|....*..
gi 46402251 276 ILLNILHHLIPPALNPIVYGVRTREIK 302
Cdd:cd15233 248 KVIGILNTVLSPMLNPLIYSLRNKDVK 274
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
41-297 1.30e-29

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 113.46  E-value: 1.30e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  41 MGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVM 120
Cdd:cd15939  15 VLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAEIFLLTVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 121 AYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLY 200
Cdd:cd15939  95 AYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCGPNVIDHFFCDLFPLLKLACTDTYVIGLL 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 201 QLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAvAKALSTCGSHFI-LILFFSTVLLVLVitnlareRIPPDIPI--L 277
Cdd:cd15939 175 VVANSGLICLLSFLILLISYIVILYSLRTHSSEGR-RKALSTCGSHITvVVLFFVPCIFIYM-------RPVTTFPIdkV 246
                       250       260
                ....*....|....*....|
gi 46402251 278 LNILHHLIPPALNPIVYGVR 297
Cdd:cd15939 247 VAVFYTIITPMLNPLIYTLR 266
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
44-305 1.11e-28

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 111.09  E-value: 1.11e-28
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHE-PMYYLLSLLSLLDIVLCLTVIPKVLAIFW-FDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMA 121
Cdd:cd15941  18 NLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLtLSGRTISFEGCVVQLYAFHFLASTECFLYTVMA 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 122 YDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQ 201
Cdd:cd15941  98 YDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQIAYFFCDIPPVLKLACADTTINELVI 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 202 LVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFF---STVLLVLVITNLARERIPPdipill 278
Cdd:cd15941 178 LANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYyvpSVFIYLQPSSSQAGAGAPA------ 251
                       250       260
                ....*....|....*....|....*..
gi 46402251 279 nILHHLIPPALNPIVYGVRTREIKQGI 305
Cdd:cd15941 252 -VFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
44-297 1.35e-27

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 108.04  E-value: 1.35e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15938  18 NLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAEMFLLTVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15938  98 RYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQVNNFFCDVPPVIKLACTDTCVTELLMVS 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIfrvVLRIKAEGAVAKALSTCGSHFILIlffsTVLLVLVITNLARERIPPDIPILLNILHH 283
Cdd:cd15938 178 NSGLISTVCFVVLVTSYTTI---LVTIRSTEGRRKALSTCASHLMVV----TLFFGPCIFIYARPFSTFPVDKHVSVLYN 250
                       250
                ....*....|....
gi 46402251 284 LIPPALNPIVYGVR 297
Cdd:cd15938 251 VITPMLNPLIYTLR 264
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
44-297 2.75e-27

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 107.42  E-value: 2.75e-27
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15936  18 NLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFLLSVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15936  98 RYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPNVLDNFYCDVPQVIKLACTDTFLLELLMVS 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFrVVLRIKAEGAVAKALSTCGSHFILIlffsTVLLVLVITNLAR--ERIPPDipILLNIL 281
Cdd:cd15936 178 NSGLVTLLIFFILLISYTVIL-VKIRTHVTEGKRKALSTCASQITVV----TLIFVPCIYIYARpfQTFPMD--KAVSVL 250
                       250
                ....*....|....*.
gi 46402251 282 HHLIPPALNPIVYGVR 297
Cdd:cd15936 251 YTVITPMLNPMIYTLR 266
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
44-302 7.66e-25

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 101.02  E-value: 7.66e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15433  18 NTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVLLAVMAFD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd15433  98 RYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGHRLLDHFFCEMPVFLKLACGDDETTEVQMFV 177
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 204 AGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPDIPILLniLHH 283
Cdd:cd15433 178 ARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIHRYSQAHGKFVSL--FYT 255
                       250
                ....*....|....*....
gi 46402251 284 LIPPALNPIVYGVRTREIK 302
Cdd:cd15433 256 VMTPALNPLIYTLRNKDVK 274
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
44-297 5.04e-24

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 98.68  E-value: 5.04e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHE-PMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15935  18 NLLIVVTVHADPHLLQsPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHFLGGSEMLLLTLMAY 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYqL 202
Cdd:cd15935  98 DRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPNELDNFYCDVPQVIKLACMDTYVVEVL-M 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLILIVL-SYSFIFrVVLRIKAEGAVAKALSTCGSHFILILFFSTVLLVLVITNLARERIPPdipiLLNIL 281
Cdd:cd15935 177 VANSGLLSLVCFLVLLvSYGIIL-TTLRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSSSSVDK----VASVF 251
                       250
                ....*....|....*.
gi 46402251 282 HHLIPPALNPIVYGVR 297
Cdd:cd15935 252 YTLITPALNPLIYTLR 267
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
43-297 7.23e-23

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 95.19  E-value: 7.23e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:cd15937  17 GNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEMFLLVAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIIKNCICTNLSVSRLSCDDITLNKLYQL 202
Cdd:cd15937  97 DRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPNVLDNFFCDITQVIKLACTNTYTVELLMF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLGSDLILIVLSYSFIFrVVLRIKAEGAVAKALSTCGSHFILILffstVLLVLVITNLARERIPPDIPILLNILH 282
Cdd:cd15937 177 SNSGLVILLCFLLLLISYAFLL-AKLRTHSSKGKSKAASTCITHIIIVF----VMFGPAIYIYARPFRSFPMDKVVAVFH 251
                       250
                ....*....|....*
gi 46402251 283 HLIPPALNPIVYGVR 297
Cdd:cd15937 252 TVIFPLLNPMIYTLR 266
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
44-294 5.14e-17

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 78.88  E-value: 5.14e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251    44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLA-IFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAY 122
Cdd:pfam00001   2 NLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLVyYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAISI 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251   123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPVPILSARLKYCAQNIiknCICTNLSVSRLSCDDITLnkLYQL 202
Cdd:pfam00001  82 DRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSLPPLLFGWTLTVPEGNV---TVCFIDFPEDLSKPVSYT--LLIS 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251   203 VAGWTLLgsdLILIVLSYSFIFRVVLRIKAEGAVA-------KALSTCGSHFIL-ILFFSTVLLVLVITNLARERIPPDI 274
Cdd:pfam00001 157 VLGFLLP---LLVILVCYTLIIRTLRKSASKQKSSertqrrrKALKTLAVVVVVfILCWLPYHIVNLLDSLALDCELSRL 233
                         250       260
                  ....*....|....*....|...
gi 46402251   275 PILLNILHHLIP---PALNPIVY 294
Cdd:pfam00001 234 LDKALSVTLWLAyvnSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
44-297 1.80e-12

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 66.16  E-value: 1.80e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd00637  16 NLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTLTAISVD 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVR--AAIFIISrnALISLPVPILSARLKYCAQNIIKNCictnlsvsrlsCDDITLNKLYQ 201
Cdd:cd00637  96 RYLAIVHPLRYRRRFTRRRAKLliALIWLLS--LLLALPPLLGWGVYDYGGYCCCCLC-----------WPDLTLSKAYT 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 202 LVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSH-----------FILILFFS---TVLLVLVITNLAR 267
Cdd:cd00637 163 IFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRRrrrerkvtktlLIVVVVFLlcwLPYFILLLLDVFG 242
                       250       260       270
                ....*....|....*....|....*....|..
gi 46402251 268 ERIPPDIPILLNILH--HLIPPALNPIVYGVR 297
Cdd:cd00637 243 PDPSPLPRILYFLALllAYLNSAINPIIYAFF 274
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
44-303 1.54e-06

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 48.79  E-value: 1.54e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIfwfdnkSIGFSSCFLQMFVMNSFLTM--ESCTF--MV 119
Cdd:cd14968  18 NVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIPLAILI------SLGLPTNFHGCLFMACLVLVltQSSIFslLA 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDqfvvRAAIFIISRNALISLPV---PILSARLKYCAQNIIKNCI--CTNLSVSRLScddi 194
Cdd:cd14968  92 IAIDRYLAIKIPLRYKSLVTG----RRAWGAIAVCWVLSFLVgltPMFGWNNGAPLESGCGEGGiqCLFEEVIPMD---- 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 195 tlNKLYQLVAGWTLLgsDLILIVLSYSFIFRVV---LRIKAEGAV--------AKALSTCGSHFILILFFSTVLLVLVIT 263
Cdd:cd14968 164 --YMVYFNFFACVLV--PLLIMLVIYLRIFRVIrkqLRQIESLLRsrrsrstlQKEVKAAKSLAIILFLFALCWLPLHII 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 46402251 264 N----LARERIPPDIPILLNILHHLIPPALNPIVYGVRTREIKQ 303
Cdd:cd14968 240 NcitlFCPECKVPKILTYIAILLSHANSAVNPIVYAYRIRKFRQ 283
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
43-305 4.49e-06

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 47.17  E-value: 4.49e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  43 ANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIP-----KVLAIFWFDNKSIGFSSCFLQMFVMNSfltmeSCTF 117
Cdd:cd14967  16 GNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPfsavyTLLGYWPFGPVLCRFWIALDVLCCTAS-----ILNL 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 118 MVMAYDRYVAICKPLQYPTVITDQFVVR--AAIFIISrnALISLPvPILSARLKYcaQNIIKNCICtnlsvsrlscdDIT 195
Cdd:cd14967  91 CAISLDRYLAITRPLRYRQLMTKKRALImiAAVWVYS--LLISLP-PLVGWRDET--QPSVVDCEC-----------EFT 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 196 LNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLR-IKAegavAKALSTCGSHFILI-LFFSTVLLVLVItnLARERIPPD 273
Cdd:cd14967 155 PNKIYVLVSSVISFFIPLLIMIVLYARIFRVARReLKA----AKTLAIIVGAFLLCwLPFFIIYLVSAF--CPPDCVPPI 228
                       250       260       270
                ....*....|....*....|....*....|..
gi 46402251 274 IPILLNILHHlIPPALNPIVYGVRTREIKQGI 305
Cdd:cd14967 229 LYAVFFWLGY-LNSALNPIIYALFNRDFRRAF 259
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
40-303 4.55e-06

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 47.19  E-value: 4.55e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15326  14 AIVGNILVILSVVCNRHLRIPTNYFIVNLAIADLLLSFTVLPFSATLEILGYWVFGRIFCDIWAAVDVLCCTASILSLCA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPvPILSarLKYCAQNIIKNCictnlsvsrlscdDITLNKL 199
Cdd:cd15326  94 ISIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISIG-PLLG--WKEPAPPDDKVC-------------EITEEPF 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 200 YQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFIL--ILFFstvlLVLVITNLARERIPPDIPIL 277
Cdd:cd15326 158 YALFSSLGSFYIPLIVILVMYCRVYIVALKFSREKKAAKTLGIVVGMFILcwLPFF----IALPLGSLFSHLKPPETLFK 233
                       250       260
                ....*....|....*....|....*.
gi 46402251 278 LNILHHLIPPALNPIVYGVRTREIKQ 303
Cdd:cd15326 234 IIFWLGYFNSCLNPIIYPCSSKEFKR 259
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
40-229 3.24e-05

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 44.63  E-value: 3.24e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15083  14 GVVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCDMYGFSGGLFGIMSINTLAA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPvPILSARlKYCAQNIIKNCictnlSVSRLSCDDitLNKL 199
Cdd:cd15083  94 IAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLP-PLFGWS-RYVLEGLLTSC-----SFDYLSRDD--ANRS 164
                       170       180       190
                ....*....|....*....|....*....|
gi 46402251 200 YQLVAGWTLLGSDLILIVLSYSFIFRVVLR 229
Cdd:cd15083 165 YVICLLIFGFVLPLLIIIYCYSFIFRAVRR 194
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
44-303 3.14e-04

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 41.69  E-value: 3.14e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  44 NATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPkvLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYD 123
Cdd:cd15070  18 NVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIP--LAIVVSLGVTIHFYSCLFMSCLLVVFTHASIMSLLAIAVD 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 124 RYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLpVPILSARLKYCAQNIIKNCI-CTNLSVSRLScdditlNKLYQL 202
Cdd:cd15070  96 RYLRVKLTVRYRIVTTQRRIWLALGLCWLVSFLVGL-TPMFGWNRKPSLESVNTTPLqCQFTSVMRMD------YMVYFS 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 203 VAGWTLLgsDLILIVLSYSFIFRVVLRIKAEGAVA---------KALSTCGSHFILILFFSTVLLVLVITNLARERIP-- 271
Cdd:cd15070 169 FFTWILI--PLVIMCALYVDIFYIIRNKLSQNATGfretgafygREFKTAKSLALVLFLFAVCWLPLSIINCVVYFNPkv 246
                       250       260       270
                ....*....|....*....|....*....|..
gi 46402251 272 PDIPILLNILHHLIPPALNPIVYGVRTREIKQ 303
Cdd:cd15070 247 PKIALYLGILLSHANSMMNPIVYACKIKKFKE 278
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
99-150 7.53e-04

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 40.62  E-value: 7.53e-04
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|..
gi 46402251  99 CFLQMFVMNSFLTMESCTFMVMAYDRYVAICKPLQYPTVITdqfVVRAAIFI 150
Cdd:cd15055  73 CKLHSSLDYILTSASIFNLVLIAIDRYVAVCDPLLYPTKIT---IRRVKICI 121
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
72-229 9.62e-04

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 40.28  E-value: 9.62e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  72 DIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRAAIFII 151
Cdd:cd15959  46 DLVMGLLVVPPGATILLTGHWPLGTTVCELWTSVDVLCVTASIETLCAIAVDRYLAITNPLRYEALVTKRRARTAVCLVW 125
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 46402251 152 SRNALISLpVPILSARLKYCAQNIIKNCictnlsVSRLSCDDITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLR 229
Cdd:cd15959 126 AISAAISF-LPIMNQWWRDGADEEAQRC------YDNPRCCDFVTNMPYAIVSSTVSFYVPLLVMIFVYVRVFVVATR 196
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
72-203 1.51e-03

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 39.54  E-value: 1.51e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  72 DIVLCLTVIPKVLAIFWFDNKSIGFS-----SCFLQMFVMNSFLTMESCTFMVMAYDRYVAICKPLQYPTVITDQFVVRA 146
Cdd:cd14978  45 DILVLLSALPLFLLPYIADYSSSFLSyfyayFLPYIYPLANTFQTASVWLTVALTVERYIAVCHPLKARTWCTPRRARRV 124
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 46402251 147 AIFIISRNALISLPVPILsarlkycaQNIIKNCICTNLSVSRLSCDDITLNKLYQLV 203
Cdd:cd14978 125 ILIIIIFSLLLNLPRFFE--------YEVVECENCNNNSYYYVIPTLLRQNETYLLK 173
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
95-151 2.55e-03

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 38.81  E-value: 2.55e-03
                        10        20        30        40        50
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 46402251  95 GFSSCFLQMFVMNSFLTMESCTFMVMAYDRYVAICKPLQYPTVITdqfVVRAAIFII 151
Cdd:cd15390  69 GLFYCKFSNFVAITTVAASVFTLMAISIDRYIAIVHPLRPRLSRR---TTKIAIAVI 122
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
40-139 2.62e-03

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 38.76  E-value: 2.62e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAI---FWFDNKSIGFSSCFLQMFVMNSFLTMesct 116
Cdd:cd15069  14 SVAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAITIslgFCTDFHSCLFLACFVLVLTQSSIFSL---- 89
                        90       100
                ....*....|....*....|...
gi 46402251 117 fMVMAYDRYVAICKPLQYPTVIT 139
Cdd:cd15069  90 -LAVAVDRYLAIKVPLRYKSLVT 111
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
123-303 2.75e-03

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 38.51  E-value: 2.75e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 123 DRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLpVPILSA------RLKYCAQNiikNCICTnlsvsrlscddITL 196
Cdd:cd15066  96 DRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALISF-LPIFLGwytteeHLQYRKTH---PDQCE-----------FVV 160
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 197 NKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRikaEGAVAKALSTCGSHFIL--ILFFstvlLVLVITNLARERIP-PD 273
Cdd:cd15066 161 NKIYALISSSVSFWIPCIVMIFTYYRIYLEAKR---EHKAAKTLGIIMGAFILcwLPFF----LWYVTTTLCGDACPyPP 233
                       170       180       190
                ....*....|....*....|....*....|
gi 46402251 274 IPILLNILHHLIPPALNPIVYGVRTREIKQ 303
Cdd:cd15066 234 ILVSILFWIGYFNSTLNPLIYAYFNRDFRE 263
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
27-310 3.00e-03

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 38.73  E-value: 3.00e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  27 HWLSLPLSLLFLLAMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNK-SIGFSSCFLQMFV 105
Cdd:cd15305   1 NWPALLILIIIILTIGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPVSLIAILYDYAwPLPRYLCPIWISL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 106 MNSFLTMESCTFMVMAYDRYVAICKPLQYP--TVITDQFVVRAAIFIISRNalISLPVPILSARLKycaQNIIKNCICtn 183
Cdd:cd15305  81 DVLFSTASIMHLCAISLDRYVAIRNPIEHSrfNSRTKAMMKIAAVWTISIG--ISMPIPVIGLQDD---EKVFVNGTC-- 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 184 lsvsrlscddITLNKLYQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILIL-----FFSTVLL 258
Cdd:cd15305 154 ----------VLNDENFVLIGSFVAFFIPLIIMVITYCLTIQVLQRQQAINNERRASKVLGIVFFLFLimwcpFFITNIL 223
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....
gi 46402251 259 VLVITNLARERIPPDipiLLNILHHL--IPPALNPIVYGVRTREIKQGIQNLLR 310
Cdd:cd15305 224 SVLCKEACDQKLMEE---LLNVFVWVgyVSSGINPLVYTLFNKTYRRAFSNYIR 274
7tmA_alpha1_AR cd15062
alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G ...
40-303 3.35e-03

alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320190 [Multi-domain]  Cd Length: 261  Bit Score: 38.24  E-value: 3.35e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251  40 AMGANATLLITIRLEASLHEPMYYLLSLLSLLDIVLCLTVIPKVLAIFWFDNKSIGFSSCFLQMFVMNSFLTMESCTFMV 119
Cdd:cd15062  14 AIGGNLLVILSVACNRHLRTPTHYFIVNLAVADLLLSFTVLPFSATLEVLGYWAFGRIFCDVWAAVDVLCCTASIMSLCV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 120 MAYDRYVAICKPLQYPTVITDQFVVRAAIFIISRNALISLPvPILSARLKycAQNIIKNCictnlsvsrlscdDITLNKL 199
Cdd:cd15062  94 ISVDRYIGVRYPLNYPTIVTARRATVALLIVWVLSLVISIG-PLLGWKEP--APADEQAC-------------GVNEEPG 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 46402251 200 YQLVAGWTLLGSDLILIVLSYSFIFRVVLRIKAEGAVAKALSTCGSHFILILFfsTVLLVLVITNLARERIPPDIPILLN 279
Cdd:cd15062 158 YVLFSSLGSFYLPLAIILVMYCRVYVVAFKFSREKKAAKTLGIVVGAFVLCWF--PFFVVLPLGSLFSTLKPPEPVFKVV 235
                       250       260
                ....*....|....*....|....
gi 46402251 280 ILHHLIPPALNPIVYGVRTREIKQ 303
Cdd:cd15062 236 FWLGYFNSCLNPIIYPCSSREFKR 259
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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