NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|21759273|sp|O35417|]
View 

RecName: Full=Proenkephalin-B; AltName: Full=Beta-neoendorphin-dynorphin; AltName: Full=Preprodynorphin; Contains: RecName: Full=Alpha-neoendorphin; Contains: RecName: Full=Beta-neoendorphin; Contains: RecName: Full=Big dynorphin; Short=Big Dyn; Contains: RecName: Full=Dynorphin A(1-17); Short=Dyn-A17; Short=Dynorphin A; Contains: RecName: Full=Dynorphin A(1-13); Contains: RecName: Full=Dynorphin A(1-8); Contains: RecName: Full=Leu-enkephalin; Contains: RecName: Full=Rimorphin; AltName: Full=Dynorphin B; Short=Dyn-B; AltName: Full=Dynorphin B(1-13); Contains: RecName: Full=Leumorphin; AltName: Full=Dynorphin B-29; Flags: Precursor

Protein Classification

Opiods_neuropep domain-containing protein( domain architecture ID 10471788)

Opiods_neuropep domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Opiods_neuropep pfam01160
Vertebrate endogenous opioids neuropeptide;
22-68 3.17e-18

Vertebrate endogenous opioids neuropeptide;


:

Pssm-ID: 426090  Cd Length: 47  Bit Score: 75.40  E-value: 3.17e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 21759273    22 DCLSLCSLCAVRIQDGPRPINPLICSLECQDLVPPSEEWETCRGFSS 68
Cdd:pfam01160   1 DCQKDCLTCAYRLQDQQKSFNPLVCSLECEGKLSPSKEWELCKKALS 47
 
Name Accession Description Interval E-value
Opiods_neuropep pfam01160
Vertebrate endogenous opioids neuropeptide;
22-68 3.17e-18

Vertebrate endogenous opioids neuropeptide;


Pssm-ID: 426090  Cd Length: 47  Bit Score: 75.40  E-value: 3.17e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 21759273    22 DCLSLCSLCAVRIQDGPRPINPLICSLECQDLVPPSEEWETCRGFSS 68
Cdd:pfam01160   1 DCQKDCLTCAYRLQDQQKSFNPLVCSLECEGKLSPSKEWELCKKALS 47
 
Name Accession Description Interval E-value
Opiods_neuropep pfam01160
Vertebrate endogenous opioids neuropeptide;
22-68 3.17e-18

Vertebrate endogenous opioids neuropeptide;


Pssm-ID: 426090  Cd Length: 47  Bit Score: 75.40  E-value: 3.17e-18
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 21759273    22 DCLSLCSLCAVRIQDGPRPINPLICSLECQDLVPPSEEWETCRGFSS 68
Cdd:pfam01160   1 DCQKDCLTCAYRLQDQQKSFNPLVCSLECEGKLSPSKEWELCKKALS 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH