NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1080376643|gb|OFL64501|]
View 

signal peptidase II [Facklamia sp. HMSC062C11]

Protein Classification

signal peptidase II( domain architecture ID 10001765)

signal peptidase II specifically catalyzes the removal of signal peptides from membrane prolipoproteins; it belongs to the peptidase family A8

EC:  3.4.23.36
Gene Ontology:  GO:0004190|GO:0006508
MEROPS:  A8
PubMed:  31214988

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
LspA COG0597
Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular ...
 13-147 2.11e-32

Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


:

Pssm-ID: 440362 [Multi-domain]  Cd Length: 151  Bit Score: 112.12  E-value: 2.11e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTYSLLL 92
Cdd:COG0597    14 DQLTKLWVVANLALGESIPVIGGFFNLTYVENTGAAFGLLAGAGWLLIILALVVLVGLLYYLRRLKKRSKLLALALGLIL 93

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1080376643  93 GGTLGNLLDRIRLGYVVDMIDLTF--MDFPVFNVADMALTLGGFLLIVLLITDSRKK 147
Cdd:COG0597    94 GGALGNLIDRLFYGYVVDFIDFHIggWHWPIFNVADIAITIGVILLLLDSLFGKKKK 150
 
Name Accession Description Interval E-value
LspA COG0597
Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular ...
 13-147 2.11e-32

Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440362 [Multi-domain]  Cd Length: 151  Bit Score: 112.12  E-value: 2.11e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTYSLLL 92
Cdd:COG0597    14 DQLTKLWVVANLALGESIPVIGGFFNLTYVENTGAAFGLLAGAGWLLIILALVVLVGLLYYLRRLKKRSKLLALALGLIL 93

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1080376643  93 GGTLGNLLDRIRLGYVVDMIDLTF--MDFPVFNVADMALTLGGFLLIVLLITDSRKK 147
Cdd:COG0597    94 GGALGNLIDRLFYGYVVDFIDFHIggWHWPIFNVADIAITIGVILLLLDSLFGKKKK 150
Peptidase_A8 pfam01252
Signal peptidase (SPase) II;
13-141 1.43e-28

Signal peptidase (SPase) II;


Pssm-ID: 460136 [Multi-domain]  Cd Length: 140  Bit Score: 102.16  E-value: 1.43e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTYSLLL 92
Cdd:pfam01252   9 DQLTKLLIVKNLKLGEPIEVIPGFFNLTYVENTGAAFGLLAGQRWLLIILTLVAIILLIYLLLKLKKKSRLLRIALALIL 88

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1080376643  93 GGTLGNLLDRIRLGYVVDMIDLT--FMDFPVFNVADMALTLGGFLLIVLLI 141
Cdd:pfam01252  89 GGALGNLIDRLFYGYVVDFIDFHigFINFPVFNVADIAITVGVILLIIDLL 139
PRK14791 PRK14791
lipoprotein signal peptidase; Provisional
 13-141 2.82e-21

lipoprotein signal peptidase; Provisional


Pssm-ID: 237817 [Multi-domain]  Cd Length: 146  Bit Score: 83.45  E-value: 2.82e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLA-AAYLFYLWRYEAQdSRIAKLTYSLL 91
Cdd:PRK14791   13 DQLTKIWALKNLASGGDIPVIKNFFSLTYVENRGAAFGILQNKTLFLILITIIViLGLIYYIIKYKPT-SKLYKISLSLI 91

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1080376643  92 LGGTLGNLLDRIRLGYVVDMIDLTFMD--FPVFNVADMALTLGGFLLIVLLI 141
Cdd:PRK14791   92 ISGAIGNLIDRIRYGYVVDFIDFHFKDyyFPVFNVADILVVVGTILLAIYIL 143
lspA TIGR00077
lipoprotein signal peptidase; Alternate name: lipoprotein signal peptidase [Protein fate, ...
 13-147 3.08e-09

lipoprotein signal peptidase; Alternate name: lipoprotein signal peptidase [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 272893 [Multi-domain]  Cd Length: 166  Bit Score: 52.75  E-value: 3.08e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEAR-PAIKGLFQWFYLHNDGAGWGHFAN---QRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTY 88
Cdd:TIGR00077  23 DQLSKYLVLQNFDLGETYfVAFSGVFNITYVRNTGAAFSLLADqggQVYFLKGLAIAISLGLFVFLLRYKELFKITNIAF 102

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1080376643  89 SLLLGGTLGNLLDRIRLGYVVDMIDLTFMD--FPVFNVADMALTLGGFLLIVLLITDSRKK 147
Cdd:TIGR00077 103 GLIFGGALGNFIDRLVRGGVVDFFDFYFGNyhFPIFNFADSSICIGVILLLLYFFFPKRKK 163
 
Name Accession Description Interval E-value
LspA COG0597
Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular ...
 13-147 2.11e-32

Lipoprotein signal peptidase [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440362 [Multi-domain]  Cd Length: 151  Bit Score: 112.12  E-value: 2.11e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTYSLLL 92
Cdd:COG0597    14 DQLTKLWVVANLALGESIPVIGGFFNLTYVENTGAAFGLLAGAGWLLIILALVVLVGLLYYLRRLKKRSKLLALALGLIL 93

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1080376643  93 GGTLGNLLDRIRLGYVVDMIDLTF--MDFPVFNVADMALTLGGFLLIVLLITDSRKK 147
Cdd:COG0597    94 GGALGNLIDRLFYGYVVDFIDFHIggWHWPIFNVADIAITIGVILLLLDSLFGKKKK 150
Peptidase_A8 pfam01252
Signal peptidase (SPase) II;
13-141 1.43e-28

Signal peptidase (SPase) II;


Pssm-ID: 460136 [Multi-domain]  Cd Length: 140  Bit Score: 102.16  E-value: 1.43e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTYSLLL 92
Cdd:pfam01252   9 DQLTKLLIVKNLKLGEPIEVIPGFFNLTYVENTGAAFGLLAGQRWLLIILTLVAIILLIYLLLKLKKKSRLLRIALALIL 88

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1080376643  93 GGTLGNLLDRIRLGYVVDMIDLT--FMDFPVFNVADMALTLGGFLLIVLLI 141
Cdd:pfam01252  89 GGALGNLIDRLFYGYVVDFIDFHigFINFPVFNVADIAITVGVILLIIDLL 139
PRK14791 PRK14791
lipoprotein signal peptidase; Provisional
 13-141 2.82e-21

lipoprotein signal peptidase; Provisional


Pssm-ID: 237817 [Multi-domain]  Cd Length: 146  Bit Score: 83.45  E-value: 2.82e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLA-AAYLFYLWRYEAQdSRIAKLTYSLL 91
Cdd:PRK14791   13 DQLTKIWALKNLASGGDIPVIKNFFSLTYVENRGAAFGILQNKTLFLILITIIViLGLIYYIIKYKPT-SKLYKISLSLI 91

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1080376643  92 LGGTLGNLLDRIRLGYVVDMIDLTFMD--FPVFNVADMALTLGGFLLIVLLI 141
Cdd:PRK14791   92 ISGAIGNLIDRIRYGYVVDFIDFHFKDyyFPVFNVADILVVVGTILLAIYIL 143
PRK14784 PRK14784
lipoprotein signal peptidase; Provisional
 13-148 6.98e-17

lipoprotein signal peptidase; Provisional


Pssm-ID: 184819 [Multi-domain]  Cd Length: 160  Bit Score: 72.58  E-value: 6.98e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAiKGLFQWFYLHNDGAGWGHFANQRFFLITIS----TLAAAYLFYLWRYEAQDSRIAKLTY 88
Cdd:PRK14784   18 DQLSKFIITANLTTGTSIPE-SGFFQIVHVHNTGAAFSIFRGHIEWLIAASvlgvILAMTAFFIRKKLPFLDTRPGLIAL 96

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  89 SLLLGGTLGNLLDRIRLGYVVDMIDLTfmDFPVFNVADMALTLGGFLLIVLLITDSRKKG 148
Cdd:PRK14784   97 GVILAGTVGNLIDRVRLGYVTDFIRVG--DFPTFNIADSCLTVGVIGLLLLYLVSSHVSG 154
PRK14776 PRK14776
lipoprotein signal peptidase; Provisional
 13-137 3.43e-14

lipoprotein signal peptidase; Provisional


Pssm-ID: 173237  Cd Length: 170  Bit Score: 65.73  E-value: 3.43e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPaIKGLFQWFYLHNDGAGWGHFAN----QRFFLITIstlAAAYLFYLWRYEAQDSRIAK-LT 87
Cdd:PRK14776   24 DQAVKWLVQQSMAYGEYVS-VTPFFNWVHLWNTGAAFSLFANgggwQRYFFIGI---AVVVSIFLIKLILENRHKGEaIA 99

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1080376643  88 YSLLLGGTLGNLLDRIRLGYVVDMIDLTFMD--FPVFNVADMALTLGGFLLI 137
Cdd:PRK14776  100 YSLILGGAMGNLIDRVFRGYVVDSFDFYWRDwhWPAFNLADIAIVLGALLFV 151
PRK14767 PRK14767
lipoprotein signal peptidase; Provisional
 13-141 1.68e-12

lipoprotein signal peptidase; Provisional


Pssm-ID: 237811  Cd Length: 174  Bit Score: 61.65  E-value: 1.68e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTYSLLL 92
Cdd:PRK14767   24 DQITKYLAVSHLADKPSFVIIPGVFELIYLENSGAAFGMLSGKAVFFLVITVAVVIIMAFVFFKLPATKKYNPLHIILVF 103

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1080376643  93 GGTLGN--LLDRIRLGYVVDMIDLTFMDFPVFNVADMALTLGGFLLIVLLI 141
Cdd:PRK14767  104 IVAGAAgnLIDRILNGYVVDFIYFKLINFPIFNVADIYVTVSTFLFIILFL 154
PRK14786 PRK14786
lipoprotein signal peptidase; Provisional
 13-144 2.40e-11

lipoprotein signal peptidase; Provisional


Pssm-ID: 173247  Cd Length: 154  Bit Score: 58.07  E-value: 2.40e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAA-AYLFYLWRYEAQDSRIAKLTYSLL 91
Cdd:PRK14786   14 DQWTKYLIETQLKPIGAIPIVKDIFHLTYARNTGAAFSILRDKQAFLILVTTIVVgALIYYLIKILKTGEVAFKLSLAII 93

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1080376643  92 LGGTLGNLLDRIRLGYVVDMIDLTFMDFPVFNVADMALTLGGFLLIVLLITDS 144
Cdd:PRK14786   94 IGGALGNLIDRVRLNYVTDFLDFTLINYPIFNLADVFVVSGVVMLSYMLLFKG 146
PRK14785 PRK14785
lipoprotein signal peptidase; Provisional
 13-147 1.15e-10

lipoprotein signal peptidase; Provisional


Pssm-ID: 184820  Cd Length: 171  Bit Score: 56.37  E-value: 1.15e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFAN----QRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTY 88
Cdd:PRK14785   28 DQWTKWLAETKLTFLEPVPVIEPFLNWTLAYNYGAAFSFLADaggwQKWFFAGLALIMSLFLIVYLKKAPRQAKLLSLGL 107

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1080376643  89 SLLLGGTLGNLLDRIRLGYVVDMIDLTFMD---FPVFNVADMALTLGGFLLIVLLITDSRKK 147
Cdd:PRK14785  108 ALVLGGAIGNLIDRLLHGHVIDFIHVHYADvwhYPIFNIADIGICVGVALIVIDMLFLEKKR 169
PRK14777 PRK14777
lipoprotein signal peptidase; Provisional
 13-147 8.70e-10

lipoprotein signal peptidase; Provisional


Pssm-ID: 237814 [Multi-domain]  Cd Length: 184  Bit Score: 54.47  E-value: 8.70e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALH-EARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAYL--FYLWRYEaqdSRIAKLTYS 89
Cdd:PRK14777   40 DQALKAWALANLQLGaPAIPVLPGVLDWVLTFNTGAAWSLFSGSALPLALMRLLVGLGLlvYLLRRPQ---PRFLTVVLS 116

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1080376643  90 LLLGGTLGNLLDRIRLGYVVDMIDLTFM----------DFPVFNVADMALTLGGFLLIVLLITDSRKK 147
Cdd:PRK14777  117 LIAAGAIGNAIDGLRFGRVTDMLHSPALsavtralgqgDFPIFNLADMCVVGGTLLLLFASFQQDRKR 184
PRK14790 PRK14790
lipoprotein signal peptidase; Provisional
 13-143 2.76e-09

lipoprotein signal peptidase; Provisional


Pssm-ID: 173251  Cd Length: 169  Bit Score: 52.94  E-value: 2.76e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEA---RPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAYLFYLWRYEAQDSR-IAKLTY 88
Cdd:PRK14790   23 DQASKRWILATLGPVPMtkfIPLIGEDIRLAYSHNTGIAFSLFDGKSDILTVVALVISLGAIYLYRTQLPNRRlLIQVAM 102

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1080376643  89 SLLLGGTLGNLLDRIRLGYVVDMIDLTFmdFPVFNVADMALTLGGFLLIVLLITD 143
Cdd:PRK14790  103 GLILGGALGNVIDRIRLGYVVDFIQVGW--FPIFNLADSAITVGAALLMLQYALD 155
lspA TIGR00077
lipoprotein signal peptidase; Alternate name: lipoprotein signal peptidase [Protein fate, ...
 13-147 3.08e-09

lipoprotein signal peptidase; Alternate name: lipoprotein signal peptidase [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 272893 [Multi-domain]  Cd Length: 166  Bit Score: 52.75  E-value: 3.08e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEAR-PAIKGLFQWFYLHNDGAGWGHFAN---QRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTY 88
Cdd:TIGR00077  23 DQLSKYLVLQNFDLGETYfVAFSGVFNITYVRNTGAAFSLLADqggQVYFLKGLAIAISLGLFVFLLRYKELFKITNIAF 102

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1080376643  89 SLLLGGTLGNLLDRIRLGYVVDMIDLTFMD--FPVFNVADMALTLGGFLLIVLLITDSRKK 147
Cdd:TIGR00077 103 GLIFGGALGNFIDRLVRGGVVDFFDFYFGNyhFPIFNFADSSICIGVILLLLYFFFPKRKK 163
PRK14773 PRK14773
lipoprotein signal peptidase; Provisional
 41-138 4.16e-09

lipoprotein signal peptidase; Provisional


Pssm-ID: 173234  Cd Length: 192  Bit Score: 52.54  E-value: 4.16e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  41 YLHNDGAGWGHF-----ANQRFFLITISTLAAAYLFYLWRYEAQDSRIAKLTYSLLLGGTLGNLLDRIRLGYVVDMIDLT 115
Cdd:PRK14773   74 YVENPGAAWGLFrghseEFRNAFFTLVSLAAVAFILHYYRKLRQEQRYLQVALALVLGGAVGNFVDRLARGYVIDFIEWY 153

                          90       100
                  ....*....|....*....|....*...
gi 1080376643 116 F-----MDFPVFNVADMALTLGGFLLIV 138
Cdd:PRK14773  154 WwnrpdIRWPTFNVADSLIVVGVAMLVL 181
PRK14772 PRK14772
lipoprotein signal peptidase; Provisional
 13-140 2.93e-07

lipoprotein signal peptidase; Provisional


Pssm-ID: 237812 [Multi-domain]  Cd Length: 190  Bit Score: 47.56  E-value: 2.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRF-FLITISTLAAAYLFYLWRYeaqDSRIAKLTYSLL 91
Cdd:PRK14772   39 DQLTKLWVTSTMVEGERIPVLPPLLHWYYIRNSGAAFSIGENVTWvFSIIMAAVAVAILVQLRKL---GSAWWALALGLL 115

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1080376643  92 LGGTLGNLLDRI------RLGYVVDMIDLTfmDFPVFNVADMALtLGGFLLIVLL 140
Cdd:PRK14772  116 LGGALGNLTDRLfrepsfGMGHVVDFIQLP--NFAIFNIADSAV-VSGVVIICLL 167
PRK14768 PRK14768
lipoprotein signal peptidase; Provisional
 13-147 2.34e-06

lipoprotein signal peptidase; Provisional


Pssm-ID: 173229  Cd Length: 148  Bit Score: 44.51  E-value: 2.34e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITISTLAAAY-LFYLWRYEAQdsRIAKLTYSLL 91
Cdd:PRK14768   14 DQLSKIWVLNNLVDVSTIPIINNVFHLTYVENRGAAFGLLQNNQWIFIIVALLATVFgLYYLNTRKVH--IFGRLGIILI 91

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1080376643  92 LGGTLGNLLDRIRLGYVVDMIDLTFMDFPVFNVADMALTLGG-FLLIVLLITDSRKK 147
Cdd:PRK14768   92 ISGALGNLIDRVRLGFVVDYFDFRVIWEYVFNVADVFVVVGTvFLCIYVLFFESKSR 148
PRK14789 PRK14789
lipoprotein signal peptidase; Provisional
 13-151 3.82e-06

lipoprotein signal peptidase; Provisional


Pssm-ID: 173250  Cd Length: 191  Bit Score: 44.64  E-value: 3.82e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTnFALHEARPaIKGLFQWF---YLHNDGAGWGHFANQRFFL-----ITISTLAAAYLFYLwryeAQDSRIA 84
Cdd:PRK14789   19 DQLSKVWLSD-VLLRYNRP-IPLLFDWVqlaYHENTGVAFGLFPDQGGVLsvgagLVLLLLALTYQYIL----PADSRWI 92

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1080376643  85 KLTYSLLLGGTLGNLLDRIRLGYVVDMIDLTFmdFPVFNVADMALTLGGFLLIVLLITDSRKKGGVE 151
Cdd:PRK14789   93 TVAVGMIFGGGLSNLVDRIRQGYVVDFIQFGW--WPVFNLADSAITIGVAALAFHIIFIGEEPAPTE 157
PRK14778 PRK14778
lipoprotein signal peptidase; Provisional
 13-141 1.63e-05

lipoprotein signal peptidase; Provisional


Pssm-ID: 173239  Cd Length: 186  Bit Score: 42.88  E-value: 1.63e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKfYIQTNFalHEARPAIKGLFQWFYLHNDGAGWGHFANQRFFLITIsTLAAAYLFYLWRYEAQDSRIAKLTYSLLL 92
Cdd:PRK14778   12 DQLTK-RIASEI--HGTFFIVPGFLRFVKATNRGVALGLFSNLSEQVLWT-VLFVVVFLSLLPYIFRFSRLERMAMGFIL 87

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1080376643  93 GGTLGNLLDRIRLGYVVDMIDLTFMDfPVFNVADMALTLGGFLLIVLLI 141
Cdd:PRK14778   88 GGALGNLLDRIRFGYVLDFLNLTFLP-TIFNLADVFIIVGGALMILGVF 135
PRK14779 PRK14779
lipoprotein signal peptidase; Provisional
 36-137 2.20e-05

lipoprotein signal peptidase; Provisional


Pssm-ID: 184818  Cd Length: 159  Bit Score: 42.00  E-value: 2.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  36 LFQWFYLHNDGAGWGHFANQ----RFFLITISTLAAAYLFYLWRYEAQDsRIAKLTYSLLLGGTLGNLLDRIRLGYVVDM 111
Cdd:PRK14779   40 FLDLVLVYNKGVAFGLLSEApdfiRLPILLLTPIIALIITFLYALKSND-KLSNLSMGLIGGGALGNLYDRFFLGQVRDF 118

                          90       100
                  ....*....|....*....|....*...
gi 1080376643 112 IDLTFMDF--PVFNVADMALTLGGFLLI 137
Cdd:PRK14779  119 IDIYIGDFhwPAFNIADASISIGIALFI 146
PRK14787 PRK14787
lipoprotein signal peptidase; Provisional
 33-139 2.95e-04

lipoprotein signal peptidase; Provisional


Pssm-ID: 173248  Cd Length: 159  Bit Score: 38.83  E-value: 2.95e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  33 IKGLFQWFYLHNDGAGWG-HFANQRFFLITISTLAAAYLFYLWRyEAQDSRIAKLTYSLLLGGTLGNLLDRIRLGYVVDM 111
Cdd:PRK14787   36 IPDWFKLTYAENRGIAFGlEFAPPEVLLLLTGAISAGVLWYVLR-SKNRTPLFLLAFGLILGGGIGNLIDRITSGRVVDF 114

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1080376643 112 I--DL-------TFMD-FPVFNVADMALTLGGFLLIVL 139
Cdd:PRK14787  115 IyfDLyqgyifgIWVSlWPIFNIADSAITIGACMLLLF 152
PRK14788 PRK14788
lipoprotein signal peptidase; Provisional
 13-50 1.00e-03

lipoprotein signal peptidase; Provisional


Pssm-ID: 237816  Cd Length: 200  Bit Score: 37.64  E-value: 1.00e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 1080376643  13 DQAVKFYIQTNFALHEarpaIKGLFQWFYLH---NDGAGWG 50
Cdd:PRK14788   15 DQISKIYVKTHFVLGQ----SVLVFDWFKIHfveNPGMAFG 51
PRK14774 PRK14774
lipoprotein signal peptidase; Provisional
 13-139 3.51e-03

lipoprotein signal peptidase; Provisional


Pssm-ID: 173235  Cd Length: 185  Bit Score: 36.15  E-value: 3.51e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1080376643  13 DQAVKFYIQTNFALHEaRPAIKGLFQWFYLH---NDGAGWGHFANQ----RFFLITISTLAAAYLfYLWRYEAQDSRIAK 85
Cdd:PRK14774   15 DQLTKWLVVWGLDLAN-RGAIDLVAPWLTFRmawNRGINFGIGSSDqeivRWGLVIVSLAISAWV-WRWVWRSTPTRLAR 92

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1080376643  86 LTYSLLLGGTLGNLLDRIRLGYVVDMIDLTF--MDFP-VFNVADMALTLGGFLLIVL 139
Cdd:PRK14774   93 ISGGLLIGGALGNVVDRVLYGAVADFLNMSCcgIENPyAFNVADIAIFAGAFGLVLF 149
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH