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Concise Results
Standard Results
Full Results
hypothetical protein HMPREF3167_05790 [Trueperella sp. HMSC08B05]
Protein Classification
BCCT family transporter ( domain architecture ID 2807 )
BCCT (betaine-carnitine-choline transporter) family transporter shares the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]; energized by pmf-driven proton symport; similar to Escherichia coli secondary glycine betaine transporter BetU
List of domain hits
Name
Accession
Description
Interval
E-value
PRK09928 super family
cl00569 choline transport protein BetT; Provisional
19-513
0e+00
choline transport protein BetT; Provisional
PRK09928 :Pssm-ID: 469825
Cd Length: 679
Bit Score: 642.90
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 19 APAQ R VKRT VF VG SA AI IL AIAAWAFVD T GSAADALGAATG W IGQW FGW F Y I L M AT VVVI FV LVV A F SR Y G HLR LGP SD S 98
Cdd:PRK09928 10 REKD R INPV VF YT SA GL IL LFSLTTILF T DFSNRWINRTLN W VSKT FGW Y Y L L A AT LYIV FV IFI A C SR F G SIK LGP EQ S 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 99 R PEFS TFA W GS MLFAAGIG T D II FFSVAEP IA QYM A PP RV A A Q SL EAA E QA P VWT I FHYGLTGW G MYALMGM I LGYFSYR 178
Cdd:PRK09928 90 K PEFS LLS W AA MLFAAGIG I D LM FFSVAEP VT QYM Q PP EG A G Q TI EAA R QA M VWT L FHYGLTGW S MYALMGM A LGYFSYR 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 179 HGRR L AV RSAL E P V FG S R VY G VL G DV VDIAA IL GT V FG V ATTLGIGVVQ I N V GL EII F GVGKG L P AQ V ALI VVA V VM A G I 258
Cdd:PRK09928 170 YNLP L TI RSAL Y P I FG K R IN G PI G HS VDIAA VI GT I FG I ATTLGIGVVQ L N Y GL SVL F DIPES L A AQ A ALI ALS V II A T I 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 259 S AV SGV AR GI KI LS Q LNV F LA ILTVVW VL VG G R TSFLLNA I V M NVGD VLAM F P GMTL DTM AF SDADA W KAA WTLFFWAWW 338
Cdd:PRK09928 250 S VT SGV NK GI RV LS E LNV L LA LGLILF VL FM G D TSFLLNA L V L NVGD YVNR F M GMTL NSF AF DRPTE W MNN WTLFFWAWW 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 339 VAW AS FVG M FLARISRGRT L RQF II G C L TV PF LYVAV W I SIFGN A AL DRV IH d DDL AFA HATLEV PE F GFYSLL EGM PA A 418
Cdd:PRK09928 330 VAW SP FVG L FLARISRGRT I RQF VL G T L II PF TFTLL W L SIFGN S AL YEI IH - GNA AFA EEAMAH PE R GFYSLL AQY PA F 408
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 419 RVVMMI AT VVAF LFYVTSADSG S LV MA N LS S D L PTPRT DA RP WLR I FW AATT G V LT I GML VVG GI P ALQ SA TVIMGLPF A 498
Cdd:PRK09928 409 TFSASV AT ITGL LFYVTSADSG A LV LG N FT S K L KDINS DA PN WLR V FW SVAI G L LT L GML MTN GI S ALQ NT TVIMGLPF S 488
490
....*....|....*
gi 1081125424 499 I V MVVA M M G F Y RTIH 513
Cdd:PRK09928 489 F V IFFV M A G L Y KSLK 503
Name
Accession
Description
Interval
E-value
PRK09928
PRK09928 choline transport protein BetT; Provisional
19-513
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 642.90
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 19 APAQ R VKRT VF VG SA AI IL AIAAWAFVD T GSAADALGAATG W IGQW FGW F Y I L M AT VVVI FV LVV A F SR Y G HLR LGP SD S 98
Cdd:PRK09928 10 REKD R INPV VF YT SA GL IL LFSLTTILF T DFSNRWINRTLN W VSKT FGW Y Y L L A AT LYIV FV IFI A C SR F G SIK LGP EQ S 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 99 R PEFS TFA W GS MLFAAGIG T D II FFSVAEP IA QYM A PP RV A A Q SL EAA E QA P VWT I FHYGLTGW G MYALMGM I LGYFSYR 178
Cdd:PRK09928 90 K PEFS LLS W AA MLFAAGIG I D LM FFSVAEP VT QYM Q PP EG A G Q TI EAA R QA M VWT L FHYGLTGW S MYALMGM A LGYFSYR 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 179 HGRR L AV RSAL E P V FG S R VY G VL G DV VDIAA IL GT V FG V ATTLGIGVVQ I N V GL EII F GVGKG L P AQ V ALI VVA V VM A G I 258
Cdd:PRK09928 170 YNLP L TI RSAL Y P I FG K R IN G PI G HS VDIAA VI GT I FG I ATTLGIGVVQ L N Y GL SVL F DIPES L A AQ A ALI ALS V II A T I 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 259 S AV SGV AR GI KI LS Q LNV F LA ILTVVW VL VG G R TSFLLNA I V M NVGD VLAM F P GMTL DTM AF SDADA W KAA WTLFFWAWW 338
Cdd:PRK09928 250 S VT SGV NK GI RV LS E LNV L LA LGLILF VL FM G D TSFLLNA L V L NVGD YVNR F M GMTL NSF AF DRPTE W MNN WTLFFWAWW 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 339 VAW AS FVG M FLARISRGRT L RQF II G C L TV PF LYVAV W I SIFGN A AL DRV IH d DDL AFA HATLEV PE F GFYSLL EGM PA A 418
Cdd:PRK09928 330 VAW SP FVG L FLARISRGRT I RQF VL G T L II PF TFTLL W L SIFGN S AL YEI IH - GNA AFA EEAMAH PE R GFYSLL AQY PA F 408
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 419 RVVMMI AT VVAF LFYVTSADSG S LV MA N LS S D L PTPRT DA RP WLR I FW AATT G V LT I GML VVG GI P ALQ SA TVIMGLPF A 498
Cdd:PRK09928 409 TFSASV AT ITGL LFYVTSADSG A LV LG N FT S K L KDINS DA PN WLR V FW SVAI G L LT L GML MTN GI S ALQ NT TVIMGLPF S 488
490
....*....|....*
gi 1081125424 499 I V MVVA M M G F Y RTIH 513
Cdd:PRK09928 489 F V IFFV M A G L Y KSLK 503
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
13-518
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 553.60
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 13 S APAHPAPAQRVKRT VF VG SA AI ILA IAA W AFVDTGS A ADA L G AA TG WI GQW FGWFY I L MATVV V I F V L VV AFS R YG HL R 92
Cdd:COG1292 2 S DKNKEKFKKKIDPP VF IP SA LL ILA FVL W GLLFPEA A GAV L N AA FS WI TTN FGWFY L L LVLLF V V F C L YL AFS K YG KI R 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 93 LG PS D SR PEFSTF A W GS MLF A AG I G TDII F FS VAEP IAQYMA PP R - V AAQ S L EAA EQ A PVW T I FH Y GL TG W GM YAL M G MI 171
Cdd:COG1292 82 LG GD D AK PEFSTF S W FA MLF S AG M G IGLV F WG VAEP LYHFLS PP P g V EPG S P EAA RW A MAY T F FH W GL HA W AI YAL V G LA 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 172 L G YF S YR H G RR L AVR SAL E P VF G S R V YG VL G D V V DI A A ILG TVFGVAT T LG I G VV QIN V GL EII FG VGKG L PA Q VAL I V V 251
Cdd:COG1292 162 L A YF A YR R G LP L TIS SAL Y P LL G D R I YG PI G K V I DI L A VFA TVFGVAT S LG L G AL QIN A GL NYL FG IPNS L TV Q III I A V 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 252 AVVMAG ISAVSG VAR GIK I LS Q LN VF LA I L TVVW VL VG G R T S F L LN AI V MNV GD V L AM F PG M T L D T M A FS D AD a W KAA WT 331
Cdd:COG1292 242 ITALFT ISAVSG LDK GIK R LS N LN MV LA L L LLLF VL IV G P T L F I LN LF V QSL GD Y L QN F VP M S L W T D A YG D TG - W LGG WT 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 332 L F F WAWW V AWA S FVG M F L ARISRGRT L R Q F II G C L T VP F L YVAV W I S I FG NA A LDRVIH d DDLAF A H A TLEVP E FGFYS L 411
Cdd:COG1292 321 V F Y WAWW I AWA P FVG L F I ARISRGRT I R E F VL G V L L VP T L FTFL W F S V FG GT A IHLELN - GGGDL A E A VAAGV E AALFA L 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 412 LE GM P AARVVMMI A TVVAFL F Y VTSADSGSLV M A N L S S DL ptp RTDARP W L RIFW AATT G VLTIGM L VV GG IP ALQ S A TV 491
Cdd:COG1292 400 LE QL P LGTILSVL A IILVII F F VTSADSGSLV L A M L T S GG --- DEEPPR W Q RIFW GVLI G LVAAVL L LA GG LS ALQ T A SI 476
490 500
....*....|....*....|....*..
gi 1081125424 492 I MG LPF AI V MVVAMMGFYRTIHD D VD R 518
Cdd:COG1292 477 I TA LPF SF V LLLMCVSLVKALRE D PR R 503
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
28-515
6.95e-174
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 498.99
E-value: 6.95e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 28 VF VG SA AI ILA IAAWAFVDTGSAADALGA A TG WI GQW FGWFY I L MATVVVI F V L VV AFSRYG HL RLG PS D SR PEFSTF A W 107
Cdd:pfam02028 1 VF AV SA GL ILA FVLLGLIFPEALSAVVNT A LD WI TDN FGWFY L L LVLIFLV F A L FL AFSRYG NI RLG GD D DK PEFSTF S W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 108 GS MLFAAG I G TDII F FS VAEP IAQ Y MA PP RVA - AQSL EAA E QA PVW T I FH Y GL TG W GM YAL MGMI L G YF S YR H G RR L AVR 186
Cdd:pfam02028 81 FA MLFAAG M G IGLV F WG VAEP LSH Y LS PP PGG e PGTP EAA Q QA MAY T F FH W GL HA W AI YAL VALA L A YF A YR K G LP L LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 187 SAL E P VF G S R VY G VL G DVV DI A AI LG TVFGVAT T LG I G VV QIN V GL EII FG VGKG L PA Q V A L I VVAVVMAG ISAVSG VAR 266
Cdd:pfam02028 161 SAL Y P LL G D R ID G PI G KAI DI L AI IA TVFGVAT S LG L G AL QIN A GL SYL FG IPNT L TT Q L A I I AIITALFT ISAVSG LDK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 267 GIK I LS Q LN VF LA ILTVVW VL VG G R T S F L LN AI V MNV GD V L AM F PG M TLD T MA F S D ADA W KAA WT L F F WAWW V AWA S FVG 346
Cdd:pfam02028 241 GIK R LS N LN MY LA VALLLF VL IA G P T L F I LN TF V QSL GD Y L QN F VP M SFY T DP F G D TGG W LGG WT I F Y WAWW I AWA P FVG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 347 MF L ARISRGRT L R Q FI I G C L T VP F L YVAV W I S I FG NA A LDRVIHDDD l AF A H A TLEV P EFGFYS LLE GM P AARVVMMI A T 426
Cdd:pfam02028 321 MF I ARISRGRT I R E FI L G V L L VP T L FTFL W F S V FG GT A IYLELNGPG - DL A D A VEAG P PAALFA LLE QL P LGTILSVL A L 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 427 VVAFL F Y VTSADSG S LV M A N LSS DL ptp RTDARP W L R I FW AATT G VLTIGM L VV GG IP ALQSA TV I MG LPF AIVMVVAMM 506
Cdd:pfam02028 400 LLIII F F VTSADSG T LV I A M LSS GG --- DLNPPR W Q R V FW GVLL G AVAAVL L LA GG LE ALQSA SI I AA LPF SFILLLMCI 476
....*....
gi 1081125424 507 GFYRTIHDD 515
Cdd:pfam02028 477 SLFKALREE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
66-515
1.09e-148
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 433.70
E-value: 1.09e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 66 GW F YIL MA T VVVI FVL VV AFSRYG HL RLG PS D SR PEFST FA W GS MLFAAG I G TDII F FS VAEP IAQ Y MA PP RV A AQ - S LE 144
Cdd:TIGR00842 1 GW A YIL TV T LFLG FVL YI AFSRYG KI RLG RD D EK PEFST LS W LA MLFAAG M G AGLM F WG VAEP LTY Y LT PP FG A GP t S TT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 145 A A EQA PVW T I FH Y G LTG W GM YAL M G MI L G YF SY R H G RR L AVR SAL E P VF G SR V Y G VL G DVV DI A A ILG TVFGVAT T LG I G 224
Cdd:TIGR00842 81 A Q EQA LAY T L FH W G IHP W AI YAL V G LA L A YF HF R K G LP L RLS SAL V P LL G EK V N G PI G KAI DI L A LVA TVFGVAT S LG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 225 VV QIN V GL EII FG VGKGLPA Q VAL I VVAVVM A G IS AV SGV AR GIKILS QL N VF LA I L TVVW VL VG G R T S FLLN AI V MNV G 304
Cdd:TIGR00842 161 AP QIN A GL SAL FG IPDSFWL Q ALI I LCVTAL A C IS VA SGV GK GIKILS NI N MA LA F L LLLF VL IV G P T V FLLN SF V DSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 305 DV L AM FP G M TLD T MAFSDADA W KAA WT L F F WAWW VA W AS FVGMF L ARISRGRT L R Q FI I G C L TV P FLYVAV W I S I FGN A A 384
Cdd:TIGR00842 241 NY L QN FP Q M SFR T DPDDGKGG W PGG WT V F Y WAWW IS W SP FVGMF I ARISRGRT I R E FI F G V L LG P TAFTWL W F S V FGN S A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 385 L DRVIHDDDLAFAHATLEVPEFGFYS LL EGM P AARVV M MI A TVVAFL F YV TSADS G SLV M AN LS S DLPTPRTDARP W L R I 464
Cdd:TIGR00842 321 L LLQQNGGFINGPFVVETNGARALFG LL AAL P LGTIT M AL A LILIII F FI TSADS A SLV L AN TT S RGGQLGEEPPK W V R V 400
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1081125424 465 FWA ATT G VLTIGM L VV GG - IP ALQ SA T V I MG LPF AI VM V V A M MGFYRTIHD D 515
Cdd:TIGR00842 401 FWA VAI G LIALVL L FS GG s LA ALQ TT T I I AA LPF SF VM L V V M FSLIKDLKQ D 452
Name
Accession
Description
Interval
E-value
PRK09928
PRK09928 choline transport protein BetT; Provisional
19-513
0e+00
choline transport protein BetT; Provisional
Pssm-ID: 236635
Cd Length: 679
Bit Score: 642.90
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 19 APAQ R VKRT VF VG SA AI IL AIAAWAFVD T GSAADALGAATG W IGQW FGW F Y I L M AT VVVI FV LVV A F SR Y G HLR LGP SD S 98
Cdd:PRK09928 10 REKD R INPV VF YT SA GL IL LFSLTTILF T DFSNRWINRTLN W VSKT FGW Y Y L L A AT LYIV FV IFI A C SR F G SIK LGP EQ S 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 99 R PEFS TFA W GS MLFAAGIG T D II FFSVAEP IA QYM A PP RV A A Q SL EAA E QA P VWT I FHYGLTGW G MYALMGM I LGYFSYR 178
Cdd:PRK09928 90 K PEFS LLS W AA MLFAAGIG I D LM FFSVAEP VT QYM Q PP EG A G Q TI EAA R QA M VWT L FHYGLTGW S MYALMGM A LGYFSYR 169
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 179 HGRR L AV RSAL E P V FG S R VY G VL G DV VDIAA IL GT V FG V ATTLGIGVVQ I N V GL EII F GVGKG L P AQ V ALI VVA V VM A G I 258
Cdd:PRK09928 170 YNLP L TI RSAL Y P I FG K R IN G PI G HS VDIAA VI GT I FG I ATTLGIGVVQ L N Y GL SVL F DIPES L A AQ A ALI ALS V II A T I 249
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 259 S AV SGV AR GI KI LS Q LNV F LA ILTVVW VL VG G R TSFLLNA I V M NVGD VLAM F P GMTL DTM AF SDADA W KAA WTLFFWAWW 338
Cdd:PRK09928 250 S VT SGV NK GI RV LS E LNV L LA LGLILF VL FM G D TSFLLNA L V L NVGD YVNR F M GMTL NSF AF DRPTE W MNN WTLFFWAWW 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 339 VAW AS FVG M FLARISRGRT L RQF II G C L TV PF LYVAV W I SIFGN A AL DRV IH d DDL AFA HATLEV PE F GFYSLL EGM PA A 418
Cdd:PRK09928 330 VAW SP FVG L FLARISRGRT I RQF VL G T L II PF TFTLL W L SIFGN S AL YEI IH - GNA AFA EEAMAH PE R GFYSLL AQY PA F 408
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 419 RVVMMI AT VVAF LFYVTSADSG S LV MA N LS S D L PTPRT DA RP WLR I FW AATT G V LT I GML VVG GI P ALQ SA TVIMGLPF A 498
Cdd:PRK09928 409 TFSASV AT ITGL LFYVTSADSG A LV LG N FT S K L KDINS DA PN WLR V FW SVAI G L LT L GML MTN GI S ALQ NT TVIMGLPF S 488
490
....*....|....*
gi 1081125424 499 I V MVVA M M G F Y RTIH 513
Cdd:PRK09928 489 F V IFFV M A G L Y KSLK 503
BetT
COG1292 Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
13-518
0e+00
Choline-glycine betaine transporter [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440903
Cd Length: 512
Bit Score: 553.60
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 13 S APAHPAPAQRVKRT VF VG SA AI ILA IAA W AFVDTGS A ADA L G AA TG WI GQW FGWFY I L MATVV V I F V L VV AFS R YG HL R 92
Cdd:COG1292 2 S DKNKEKFKKKIDPP VF IP SA LL ILA FVL W GLLFPEA A GAV L N AA FS WI TTN FGWFY L L LVLLF V V F C L YL AFS K YG KI R 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 93 LG PS D SR PEFSTF A W GS MLF A AG I G TDII F FS VAEP IAQYMA PP R - V AAQ S L EAA EQ A PVW T I FH Y GL TG W GM YAL M G MI 171
Cdd:COG1292 82 LG GD D AK PEFSTF S W FA MLF S AG M G IGLV F WG VAEP LYHFLS PP P g V EPG S P EAA RW A MAY T F FH W GL HA W AI YAL V G LA 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 172 L G YF S YR H G RR L AVR SAL E P VF G S R V YG VL G D V V DI A A ILG TVFGVAT T LG I G VV QIN V GL EII FG VGKG L PA Q VAL I V V 251
Cdd:COG1292 162 L A YF A YR R G LP L TIS SAL Y P LL G D R I YG PI G K V I DI L A VFA TVFGVAT S LG L G AL QIN A GL NYL FG IPNS L TV Q III I A V 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 252 AVVMAG ISAVSG VAR GIK I LS Q LN VF LA I L TVVW VL VG G R T S F L LN AI V MNV GD V L AM F PG M T L D T M A FS D AD a W KAA WT 331
Cdd:COG1292 242 ITALFT ISAVSG LDK GIK R LS N LN MV LA L L LLLF VL IV G P T L F I LN LF V QSL GD Y L QN F VP M S L W T D A YG D TG - W LGG WT 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 332 L F F WAWW V AWA S FVG M F L ARISRGRT L R Q F II G C L T VP F L YVAV W I S I FG NA A LDRVIH d DDLAF A H A TLEVP E FGFYS L 411
Cdd:COG1292 321 V F Y WAWW I AWA P FVG L F I ARISRGRT I R E F VL G V L L VP T L FTFL W F S V FG GT A IHLELN - GGGDL A E A VAAGV E AALFA L 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 412 LE GM P AARVVMMI A TVVAFL F Y VTSADSGSLV M A N L S S DL ptp RTDARP W L RIFW AATT G VLTIGM L VV GG IP ALQ S A TV 491
Cdd:COG1292 400 LE QL P LGTILSVL A IILVII F F VTSADSGSLV L A M L T S GG --- DEEPPR W Q RIFW GVLI G LVAAVL L LA GG LS ALQ T A SI 476
490 500
....*....|....*....|....*..
gi 1081125424 492 I MG LPF AI V MVVAMMGFYRTIHD D VD R 518
Cdd:COG1292 477 I TA LPF SF V LLLMCVSLVKALRE D PR R 503
BCCT
pfam02028 BCCT, betaine/carnitine/choline family transporter;
28-515
6.95e-174
BCCT, betaine/carnitine/choline family transporter;
Pssm-ID: 460420
Cd Length: 485
Bit Score: 498.99
E-value: 6.95e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 28 VF VG SA AI ILA IAAWAFVDTGSAADALGA A TG WI GQW FGWFY I L MATVVVI F V L VV AFSRYG HL RLG PS D SR PEFSTF A W 107
Cdd:pfam02028 1 VF AV SA GL ILA FVLLGLIFPEALSAVVNT A LD WI TDN FGWFY L L LVLIFLV F A L FL AFSRYG NI RLG GD D DK PEFSTF S W 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 108 GS MLFAAG I G TDII F FS VAEP IAQ Y MA PP RVA - AQSL EAA E QA PVW T I FH Y GL TG W GM YAL MGMI L G YF S YR H G RR L AVR 186
Cdd:pfam02028 81 FA MLFAAG M G IGLV F WG VAEP LSH Y LS PP PGG e PGTP EAA Q QA MAY T F FH W GL HA W AI YAL VALA L A YF A YR K G LP L LIS 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 187 SAL E P VF G S R VY G VL G DVV DI A AI LG TVFGVAT T LG I G VV QIN V GL EII FG VGKG L PA Q V A L I VVAVVMAG ISAVSG VAR 266
Cdd:pfam02028 161 SAL Y P LL G D R ID G PI G KAI DI L AI IA TVFGVAT S LG L G AL QIN A GL SYL FG IPNT L TT Q L A I I AIITALFT ISAVSG LDK 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 267 GIK I LS Q LN VF LA ILTVVW VL VG G R T S F L LN AI V MNV GD V L AM F PG M TLD T MA F S D ADA W KAA WT L F F WAWW V AWA S FVG 346
Cdd:pfam02028 241 GIK R LS N LN MY LA VALLLF VL IA G P T L F I LN TF V QSL GD Y L QN F VP M SFY T DP F G D TGG W LGG WT I F Y WAWW I AWA P FVG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 347 MF L ARISRGRT L R Q FI I G C L T VP F L YVAV W I S I FG NA A LDRVIHDDD l AF A H A TLEV P EFGFYS LLE GM P AARVVMMI A T 426
Cdd:pfam02028 321 MF I ARISRGRT I R E FI L G V L L VP T L FTFL W F S V FG GT A IYLELNGPG - DL A D A VEAG P PAALFA LLE QL P LGTILSVL A L 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 427 VVAFL F Y VTSADSG S LV M A N LSS DL ptp RTDARP W L R I FW AATT G VLTIGM L VV GG IP ALQSA TV I MG LPF AIVMVVAMM 506
Cdd:pfam02028 400 LLIII F F VTSADSG T LV I A M LSS GG --- DLNPPR W Q R V FW GVLL G AVAAVL L LA GG LE ALQSA SI I AA LPF SFILLLMCI 476
....*....
gi 1081125424 507 GFYRTIHDD 515
Cdd:pfam02028 477 SLFKALREE 485
bcct
TIGR00842 choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family ...
66-515
1.09e-148
choline/carnitine/betaine transport; The Betaine/Carnitine/Choline Transporter (BCCT) Family (TC 2.A.15) Proteins of the BCCT family share the common functional feature of transporting molecules with a quaternary ammonium group [R-N+(CH3)3]. The BCCT family includes transporters for carnitine, choline and glycine betaine. BCCT transporters have 12 putative TMS, and are energized by pmf-driven proton symport. Some of these permeases exhibit osmosensory and osmoregulatory properties inherent to their polypeptide chains. [Transport and binding proteins, Other]
Pssm-ID: 213565
Cd Length: 452
Bit Score: 433.70
E-value: 1.09e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 66 GW F YIL MA T VVVI FVL VV AFSRYG HL RLG PS D SR PEFST FA W GS MLFAAG I G TDII F FS VAEP IAQ Y MA PP RV A AQ - S LE 144
Cdd:TIGR00842 1 GW A YIL TV T LFLG FVL YI AFSRYG KI RLG RD D EK PEFST LS W LA MLFAAG M G AGLM F WG VAEP LTY Y LT PP FG A GP t S TT 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 145 A A EQA PVW T I FH Y G LTG W GM YAL M G MI L G YF SY R H G RR L AVR SAL E P VF G SR V Y G VL G DVV DI A A ILG TVFGVAT T LG I G 224
Cdd:TIGR00842 81 A Q EQA LAY T L FH W G IHP W AI YAL V G LA L A YF HF R K G LP L RLS SAL V P LL G EK V N G PI G KAI DI L A LVA TVFGVAT S LG L G 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 225 VV QIN V GL EII FG VGKGLPA Q VAL I VVAVVM A G IS AV SGV AR GIKILS QL N VF LA I L TVVW VL VG G R T S FLLN AI V MNV G 304
Cdd:TIGR00842 161 AP QIN A GL SAL FG IPDSFWL Q ALI I LCVTAL A C IS VA SGV GK GIKILS NI N MA LA F L LLLF VL IV G P T V FLLN SF V DSI G 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 305 DV L AM FP G M TLD T MAFSDADA W KAA WT L F F WAWW VA W AS FVGMF L ARISRGRT L R Q FI I G C L TV P FLYVAV W I S I FGN A A 384
Cdd:TIGR00842 241 NY L QN FP Q M SFR T DPDDGKGG W PGG WT V F Y WAWW IS W SP FVGMF I ARISRGRT I R E FI F G V L LG P TAFTWL W F S V FGN S A 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 385 L DRVIHDDDLAFAHATLEVPEFGFYS LL EGM P AARVV M MI A TVVAFL F YV TSADS G SLV M AN LS S DLPTPRTDARP W L R I 464
Cdd:TIGR00842 321 L LLQQNGGFINGPFVVETNGARALFG LL AAL P LGTIT M AL A LILIII F FI TSADS A SLV L AN TT S RGGQLGEEPPK W V R V 400
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 1081125424 465 FWA ATT G VLTIGM L VV GG - IP ALQ SA T V I MG LPF AI VM V V A M MGFYRTIHD D 515
Cdd:TIGR00842 401 FWA VAI G LIALVL L FS GG s LA ALQ TT T I I AA LPF SF VM L V V M FSLIKDLKQ D 452
PRK03356
PRK03356 L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
59-511
8.08e-62
L-carnitine/gamma-butyrobetaine antiport BCCT transporter;
Pssm-ID: 179568
Cd Length: 504
Bit Score: 210.75
E-value: 8.08e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 59 GW IGQ W F ------ GWF YIL matvvvifvlvva F SR Y GHL RLG ps D SR PEFST FA W GS M L FA AGIGTDII F FSVA E p I AQ Y 132
Cdd:PRK03356 52 GW AFE W Y mvvmlf GWF WLV ------------- F GP Y AKK RLG -- D EK PEFST AS W IF M M FA SCTSAAVL F WGSI E - I YY Y 115
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 133 MAP P RVAAQSL -- E A A E QAPVWTI FH Y G LTG W GM Y ALMGMIL GYF SYRH g RRLAV R -- S A L E P VF G SR - VY G VL G DV VD I 207
Cdd:PRK03356 116 IST P PFGLEPN st G A K E LGLAYSL FH W G PLP W AT Y SFLSVAF GYF FFVR - KMDVI R ps S T L V P LV G EK h AK G LF G TI VD N 194
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 208 AAILGTV F GVA T T LG IGVVQINVGLEII FG VGKG L PAQVAL I VVAVVMAG I SAVS G VAR G IK I L S QLNVF L AI L TVV WV L 287
Cdd:PRK03356 195 FYLVALI F AMG T S LG LATPLVTECMQWL FG IPHT L QLDAII I TCWIILNA I CVAC G LQK G VR I A S DVRSY L SF L MLG WV F 274
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 288 VG G R TSF LL N AIVMN VG DV L AMF P G M TLD T MAFS d ADAWKAA WT L F F WAWWV AW A SFVGM FLARISRGRT L R QFII G CLT 367
Cdd:PRK03356 275 IV G G TSF IM N YFTDS VG ML L MYL P R M LFY T DPIG - KGGFPQG WT V F Y WAWWV IY A IQMSI FLARISRGRT V R ELCF G MVL 353
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 368 VPFLYVAVWISIF G NAA L D rvihdddl AFAHATLEV P EF ----- GFYSLL E --- GM P AARVV M MIATVVA F LFY VT SADS 439
Cdd:PRK03356 354 GLTASTWILWTVL G SNT L L -------- LMDKNIINI P NL ieqyg VARAII E twa AL P LSTAT M WGFFILC F IAT VT LINA 425
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1081125424 440 G S LVM A NLSSDLPTPRTDARPWL RI F W AATT G VLT I GM L VV GG IPAL Q S A TVIM G L P FAI V MVVAMMG F YRT 511
Cdd:PRK03356 426 C S YTL A MSTCREVRDGEEPPLLV RI G W SILV G IIG I VL L AL GG LKPI Q T A IIAG G C P LFF V NIMVTLS F IKD 497
PRK09950
PRK09950 putative transporter; Provisional
50-515
2.23e-54
putative transporter; Provisional
Pssm-ID: 236636
Cd Length: 506
Bit Score: 191.16
E-value: 2.23e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 50 A A D A LGAATG W IGQW FG WFYI L MATVVV I F VL VV A F S R YG HL RLG ps DSR PE F ST FA W GS M LFA AG I G TDIIFFS V A E PI 129
Cdd:PRK09950 34 S A A A ANTIFQ W VTRT FG SPVQ L FVLLAM I L VL YL A T S K YG NI RLG -- EGK PE Y ST LS W LF M FIC AG L G SSTLYWG V M E WA 111
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 130 AQ Y MA P P - RV A AQ S LE A A E QAPVWTI FH Y G LTG W GM YAL MGM I LG Y - F SY R HGRR L AVRSALEPVF G SRVY G VL G DV VD I 207
Cdd:PRK09950 112 YY Y QT P G l NI A PR S PK A L E YSVSYSF FH W G ISA W AT YAL ASL I MA Y h F HV R KNKG L SLSGIIAAIT G VKPQ G PW G RL VD L 191
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 208 AAILG TV FGVATT L GIGVVQINV GL EIIF G VGKGLPA Q VAL I VVAV V MAGI S AVS G VAR G IKI LS QLNVFL A I L TVVW VL 287
Cdd:PRK09950 192 MFLIA TV GALTIS L VVTAATFTR GL SALT G LPNNFTV Q AFV I LLSG V IFCL S SYI G IDN G LQR LS KMVGWG A F L FALL VL 271
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 288 VG G R T S F LL N A I VMNV G DVLAM F PG M T L D T MAFS D A d AWKAA WT L F F W A WW VAWASF V G MF LA R I SRGR TLRQF I I G CLT 367
Cdd:PRK09950 272 IV G P T E F IT N N I INSI G LTTQN F LQ M S L F T DPMG D G - SFTRN WT V F Y W L WW ISYTPG V A MF VT R V SRGR KIKEV I W G LIL 350
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1081125424 368 VPFLYVAVWISIFGNA A LD rvihdddl A F AHATLE VP -------- E FGFYS LL EGM PA ARVVMMIATVVAFL F YVTSA D S 439
Cdd:PRK09950 351 GSSVGCWFFFGVLESY A IH -------- Q F INGVIN VP qilntlgg E TAVQQ LL SSL PA GKLFLAAYLGIMII F LASHM D A 422
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1081125424 440 GSLV MA NL S SDLPTPRT D ARPW LR I FW AATTGVLTIGM L VV G G - IPALQSAT V IMG LPF AIVMVVAMM GF Y R TIHD D 515
Cdd:PRK09950 423 VAYT MA AT S TRNLREGD D PDRG LR L FW CVVITLIPLSI L FT G A s LDTMKTTV V LTA LPF LVILLIKVY GF I R WLKQ D 499
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
