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Conserved domains on  [gi|1085543118|gb|OGW99599|]
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MAG: hypothetical protein A3G33_00265 [Omnitrophica bacterium RIFCSPLOWO2_12_FULL_44_17]

Protein Classification

DUF4145 domain-containing protein( domain architecture ID 10614588)

DUF4145 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4145 pfam13643
Domain of unknown function (DUF4145); This domain is found in a variety of restriction ...
 105-196 5.03e-15

Domain of unknown function (DUF4145); This domain is found in a variety of restriction endonuclease enzymes. The exact function of this domain is uncertain.


:

Pssm-ID: 433374 [Multi-domain]  Cd Length: 88  Bit Score: 68.11  E-value: 5.03e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085543118 105 YESCRICKLSPKASATLARRCLQGMIRDFWDIRKNRLKDEVDALQSK--VDPLVWEGIDAVRNVGNIGAHMEKDIdlivg 182
Cdd:pfam13643   1 SEAEKALDADPRAAATMIRRALEALLKDKGIAKGKSLYAKIEDLVAKgvIPPALKELLHAIRVIGNDGAHPGKPL----- 75

                          90
                  ....*....|....
gi 1085543118 183 vEPDEAKLLIGLIE 196
Cdd:pfam13643  76 -TKDDAEDLLEILE 88
 
Name Accession Description Interval E-value
DUF4145 pfam13643
Domain of unknown function (DUF4145); This domain is found in a variety of restriction ...
 105-196 5.03e-15

Domain of unknown function (DUF4145); This domain is found in a variety of restriction endonuclease enzymes. The exact function of this domain is uncertain.


Pssm-ID: 433374 [Multi-domain]  Cd Length: 88  Bit Score: 68.11  E-value: 5.03e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085543118 105 YESCRICKLSPKASATLARRCLQGMIRDFWDIRKNRLKDEVDALQSK--VDPLVWEGIDAVRNVGNIGAHMEKDIdlivg 182
Cdd:pfam13643   1 SEAEKALDADPRAAATMIRRALEALLKDKGIAKGKSLYAKIEDLVAKgvIPPALKELLHAIRVIGNDGAHPGKPL----- 75

                          90
                  ....*....|....
gi 1085543118 183 vEPDEAKLLIGLIE 196
Cdd:pfam13643  76 -TKDDAEDLLEILE 88
 
Name Accession Description Interval E-value
DUF4145 pfam13643
Domain of unknown function (DUF4145); This domain is found in a variety of restriction ...
 105-196 5.03e-15

Domain of unknown function (DUF4145); This domain is found in a variety of restriction endonuclease enzymes. The exact function of this domain is uncertain.


Pssm-ID: 433374 [Multi-domain]  Cd Length: 88  Bit Score: 68.11  E-value: 5.03e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085543118 105 YESCRICKLSPKASATLARRCLQGMIRDFWDIRKNRLKDEVDALQSK--VDPLVWEGIDAVRNVGNIGAHMEKDIdlivg 182
Cdd:pfam13643   1 SEAEKALDADPRAAATMIRRALEALLKDKGIAKGKSLYAKIEDLVAKgvIPPALKELLHAIRVIGNDGAHPGKPL----- 75

                          90
                  ....*....|....
gi 1085543118 183 vEPDEAKLLIGLIE 196
Cdd:pfam13643  76 -TKDDAEDLLEILE 88
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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