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Conserved domains on  [gi|1113433255|gb|OJW95277|]
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MAG: phosphate starvation-inducible protein PsiF [Alicycliphilus sp. 69-12]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK11505 super family cl32695
phosphate starvation-inducible protein PsiF;
37-103 1.79e-08

phosphate starvation-inducible protein PsiF;


The actual alignment was detected with superfamily member PRK11505:

Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 48.14  E-value: 1.79e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1113433255  37 TAQQSKMKTCNAEAGDR--KGDERKAFMKQCLSANKQAT-------QQDKMKTCNADAKTKKLQGDARKAFMKECL 103
Cdd:PRK11505   27 TPQQQRMTSCNQQATAQalKGDARKTYMSDCLKNSKSAPgeksltpQQQKMRECNNQATQQSLKGDDRNKFMSACL 102
 
Name Accession Description Interval E-value
PRK11505 PRK11505
phosphate starvation-inducible protein PsiF;
37-103 1.79e-08

phosphate starvation-inducible protein PsiF;


Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 48.14  E-value: 1.79e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1113433255  37 TAQQSKMKTCNAEAGDR--KGDERKAFMKQCLSANKQAT-------QQDKMKTCNADAKTKKLQGDARKAFMKECL 103
Cdd:PRK11505   27 TPQQQRMTSCNQQATAQalKGDARKTYMSDCLKNSKSAPgeksltpQQQKMRECNNQATQQSLKGDDRNKFMSACL 102
PsiF_repeat pfam07769
psiF repeat; This region is approximately 35 residues long. It is found repeated in a number ...
 71-104 7.95e-08

psiF repeat; This region is approximately 35 residues long. It is found repeated in a number of putative phosphate starvation- inducible proteins expressed by various bacterial species. psiF is known to be an example of such phosphate starvation-inducible proteins.


Pssm-ID: 429650 [Multi-domain]  Cd Length: 34  Bit Score: 44.61  E-value: 7.95e-08
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1113433255  71 QATQQDKMKTCNADAKTKKLQGDARKAFMKECLS 104
Cdd:pfam07769   1 PTAQQEKMKTCNAEAKGKALKGDERKAFMSSCLS 34
 
Name Accession Description Interval E-value
PRK11505 PRK11505
phosphate starvation-inducible protein PsiF;
37-103 1.79e-08

phosphate starvation-inducible protein PsiF;


Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 48.14  E-value: 1.79e-08
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1113433255  37 TAQQSKMKTCNAEAGDR--KGDERKAFMKQCLSANKQAT-------QQDKMKTCNADAKTKKLQGDARKAFMKECL 103
Cdd:PRK11505   27 TPQQQRMTSCNQQATAQalKGDARKTYMSDCLKNSKSAPgeksltpQQQKMRECNNQATQQSLKGDDRNKFMSACL 102
PsiF_repeat pfam07769
psiF repeat; This region is approximately 35 residues long. It is found repeated in a number ...
 71-104 7.95e-08

psiF repeat; This region is approximately 35 residues long. It is found repeated in a number of putative phosphate starvation- inducible proteins expressed by various bacterial species. psiF is known to be an example of such phosphate starvation-inducible proteins.


Pssm-ID: 429650 [Multi-domain]  Cd Length: 34  Bit Score: 44.61  E-value: 7.95e-08
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1113433255  71 QATQQDKMKTCNADAKTKKLQGDARKAFMKECLS 104
Cdd:pfam07769   1 PTAQQEKMKTCNAEAKGKALKGDERKAFMSSCLS 34
PsiF_repeat pfam07769
psiF repeat; This region is approximately 35 residues long. It is found repeated in a number ...
 37-67 2.76e-05

psiF repeat; This region is approximately 35 residues long. It is found repeated in a number of putative phosphate starvation- inducible proteins expressed by various bacterial species. psiF is known to be an example of such phosphate starvation-inducible proteins.


Pssm-ID: 429650 [Multi-domain]  Cd Length: 34  Bit Score: 38.06  E-value: 2.76e-05
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1113433255  37 TAQQSKMKTCNAEAGDR--KGDERKAFMKQCLS 67
Cdd:pfam07769   2 TAQQEKMKTCNAEAKGKalKGDERKAFMSSCLS 34
PRK11505 PRK11505
phosphate starvation-inducible protein PsiF;
74-106 7.09e-04

phosphate starvation-inducible protein PsiF;


Pssm-ID: 183165 [Multi-domain]  Cd Length: 106  Bit Score: 36.20  E-value: 7.09e-04
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1113433255  74 QQDKMKTCNADAKTKKLQGDARKAFMKECLSNK 106
Cdd:PRK11505   29 QQQRMTSCNQQATAQALKGDARKTYMSDCLKNS 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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