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Conserved domains on  [gi|1113608922|gb|OJY68012|]
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hypothetical protein BGP16_03485 [Sphingobium sp. 66-54]

Protein Classification

DUF4157 domain-containing protein( domain architecture ID 10616257)

DUF4157 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4157 pfam13699
Domain of unknown function (DUF4157); This presumed domain is functionally uncharacterized. ...
 34-113 6.22e-10

Domain of unknown function (DUF4157); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteriztic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.


:

Pssm-ID: 433412 [Multi-domain]  Cd Length: 79  Bit Score: 52.22  E-value: 6.22e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1113608922  34 PIPAAIRARLAGHFpDALLDRVRYRVGignDLALPSNAfRANAAAITLDDVIAFRADA----GAADAHLWAHELTHVQQY 109
Cdd:pfam13699   1 PLPAAVRARMERAF-GADFSDVRVHTG---PAAARAAR-ALGARAFTVGNDIFFGPGRyqpgSAAGRELLAHELTHVVQQ 75


                  ....
gi 1113608922 110 QRWG 113
Cdd:pfam13699  76 RGGG 79
 
Name Accession Description Interval E-value
DUF4157 pfam13699
Domain of unknown function (DUF4157); This presumed domain is functionally uncharacterized. ...
 34-113 6.22e-10

Domain of unknown function (DUF4157); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteriztic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.


Pssm-ID: 433412 [Multi-domain]  Cd Length: 79  Bit Score: 52.22  E-value: 6.22e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1113608922  34 PIPAAIRARLAGHFpDALLDRVRYRVGignDLALPSNAfRANAAAITLDDVIAFRADA----GAADAHLWAHELTHVQQY 109
Cdd:pfam13699   1 PLPAAVRARMERAF-GADFSDVRVHTG---PAAARAAR-ALGARAFTVGNDIFFGPGRyqpgSAAGRELLAHELTHVVQQ 75


                  ....
gi 1113608922 110 QRWG 113
Cdd:pfam13699  76 RGGG 79
 
Name Accession Description Interval E-value
DUF4157 pfam13699
Domain of unknown function (DUF4157); This presumed domain is functionally uncharacterized. ...
 34-113 6.22e-10

Domain of unknown function (DUF4157); This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 80 amino acids in length. This domain contains an HEXXH motif that is characteriztic of many families of metallopeptidases. However, no peptidase activity has been shown for this domain.


Pssm-ID: 433412 [Multi-domain]  Cd Length: 79  Bit Score: 52.22  E-value: 6.22e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1113608922  34 PIPAAIRARLAGHFpDALLDRVRYRVGignDLALPSNAfRANAAAITLDDVIAFRADA----GAADAHLWAHELTHVQQY 109
Cdd:pfam13699   1 PLPAAVRARMERAF-GADFSDVRVHTG---PAAARAAR-ALGARAFTVGNDIFFGPGRyqpgSAAGRELLAHELTHVVQQ 75


                  ....
gi 1113608922 110 QRWG 113
Cdd:pfam13699  76 RGGG 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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