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Conserved domains on  [gi|1122367699|gb|OKS82392|]
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acid-soluble spore protein N [Bacillus licheniformis]

Protein Classification

acid-soluble spore protein N( domain architecture ID 18824101)

acid-soluble spore protein N is expressed only in the forespore compartment of sporulating cells in a sigma F- and sigma G-dependent manner

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SspN COG5859
Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome ...
 1-47 1.12e-16

Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome partitioning];


:

Pssm-ID: 444561  Cd Length: 47  Bit Score: 64.83  E-value: 1.12e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 1122367699  1 MPREHDKQSKFAPSHLGTKPVEYKRNKGKKMHDKSGETPIIMQTKGE 47
Cdd:COG5859    1 MSNPKDNSSQFAPNHLGTQPRKAGGNKGKQMQDKSNEHPQVIQTKGE 47
 
Name Accession Description Interval E-value
SspN COG5859
Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome ...
 1-47 1.12e-16

Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444561  Cd Length: 47  Bit Score: 64.83  E-value: 1.12e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 1122367699  1 MPREHDKQSKFAPSHLGTKPVEYKRNKGKKMHDKSGETPIIMQTKGE 47
Cdd:COG5859    1 MSNPKDNSSQFAPNHLGTQPRKAGGNKGKQMQDKSNEHPQVIQTKGE 47
sspN PRK09398
acid-soluble spore protein N; Provisional
 1-47 1.69e-16

acid-soluble spore protein N; Provisional


Pssm-ID: 236496  Cd Length: 47  Bit Score: 64.41  E-value: 1.69e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 1122367699  1 MPREHDKQSKFAPSHLGTKPVEYKRNKGKKMHDKSGETPIIMQTKGE 47
Cdd:PRK09398   1 MGNPKKNSKQFAPNHLGTQPRKAGGNKGKKMQDQSGKQPQVIQTKGE 47
SspN pfam08177
Small acid-soluble spore protein N family; This family consists of the small acid-soluble ...
 1-46 2.76e-16

Small acid-soluble spore protein N family; This family consists of the small acid-soluble spore protein (SASP) N type (sspN). SspN is a 48 residues protein that is expressed only in the forespore compartment of sporulating Bacillus subtilis. The sspN gene is recognized equally by both sigma-G and sigma-F. The role of SspN is still not well-defined.


Pssm-ID: 285400  Cd Length: 46  Bit Score: 64.03  E-value: 2.76e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 1122367699  1 MPREHDKQSKFAPSHLGTKPVEYKRNKGKKMHDKSGETPIIMQTKG 46
Cdd:pfam08177  1 MGNPKKKSQQFVPDHLGTQPRKYGGNKGKKMQDKSGQHPQVIQTKG 46
 
Name Accession Description Interval E-value
SspN COG5859
Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome ...
 1-47 1.12e-16

Small acid-soluble spore protein SspN [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 444561  Cd Length: 47  Bit Score: 64.83  E-value: 1.12e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 1122367699  1 MPREHDKQSKFAPSHLGTKPVEYKRNKGKKMHDKSGETPIIMQTKGE 47
Cdd:COG5859    1 MSNPKDNSSQFAPNHLGTQPRKAGGNKGKQMQDKSNEHPQVIQTKGE 47
sspN PRK09398
acid-soluble spore protein N; Provisional
 1-47 1.69e-16

acid-soluble spore protein N; Provisional


Pssm-ID: 236496  Cd Length: 47  Bit Score: 64.41  E-value: 1.69e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 1122367699  1 MPREHDKQSKFAPSHLGTKPVEYKRNKGKKMHDKSGETPIIMQTKGE 47
Cdd:PRK09398   1 MGNPKKNSKQFAPNHLGTQPRKAGGNKGKKMQDQSGKQPQVIQTKGE 47
SspN pfam08177
Small acid-soluble spore protein N family; This family consists of the small acid-soluble ...
 1-46 2.76e-16

Small acid-soluble spore protein N family; This family consists of the small acid-soluble spore protein (SASP) N type (sspN). SspN is a 48 residues protein that is expressed only in the forespore compartment of sporulating Bacillus subtilis. The sspN gene is recognized equally by both sigma-G and sigma-F. The role of SspN is still not well-defined.


Pssm-ID: 285400  Cd Length: 46  Bit Score: 64.03  E-value: 2.76e-16
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 1122367699  1 MPREHDKQSKFAPSHLGTKPVEYKRNKGKKMHDKSGETPIIMQTKG 46
Cdd:pfam08177  1 MGNPKKKSQQFVPDHLGTQPRKYGGNKGKKMQDKSGQHPQVIQTKG 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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