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Conserved domains on  [gi|1151266573|gb|OOP87872|]
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shikimate kinase [Helicobacter pylori]

Protein Classification

shikimate kinase( domain architecture ID 11478131)

shikimate kinase catalyzes the specific phosphorylation of the 3-hydroxylgroup of shikimic acid using ATP as a cosubstrate

CATH:  3.40.50.300
EC:  2.7.1.71
Gene Ontology:  GO:0008652|GO:0009073|GO:0004765|GO:0000287|GO:0005524
PubMed:  2279393|7870841
SCOP:  4003925

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
aroK PRK00131
shikimate kinase; Reviewed
 1-145 7.58e-52

shikimate kinase; Reviewed


:

Pssm-ID: 234654 [Multi-domain]  Cd Length: 175  Bit Score: 163.05  E-value: 7.58e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   1 MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELkTLKTPHVISTGG 80
Cdd:PRK00131    4 GPNIVLIGFMGAGKSTIGRLLAKRLGYDFIDTDHLIEARAGKSIPEIFEEEGEAAFRELEEEVLAEL-LARHNLVISTGG 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1151266573  81 GIVMHEN----LKGLGTTFYLKMDFETLIKRLNQKerEKRPLL--NNLTQA-KELFEKRQALYEKNASFIID 145
Cdd:PRK00131   83 GAVLREEnralLRERGTVVYLDASFEELLRRLRRD--RNRPLLqtNDPKEKlRDLYEERDPLYEEVADITVE 152
 
Name Accession Description Interval E-value
aroK PRK00131
shikimate kinase; Reviewed
 1-145 7.58e-52

shikimate kinase; Reviewed


Pssm-ID: 234654 [Multi-domain]  Cd Length: 175  Bit Score: 163.05  E-value: 7.58e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   1 MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELkTLKTPHVISTGG 80
Cdd:PRK00131    4 GPNIVLIGFMGAGKSTIGRLLAKRLGYDFIDTDHLIEARAGKSIPEIFEEEGEAAFRELEEEVLAEL-LARHNLVISTGG 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1151266573  81 GIVMHEN----LKGLGTTFYLKMDFETLIKRLNQKerEKRPLL--NNLTQA-KELFEKRQALYEKNASFIID 145
Cdd:PRK00131   83 GAVLREEnralLRERGTVVYLDASFEELLRRLRRD--RNRPLLqtNDPKEKlRDLYEERDPLYEEVADITVE 152
SK cd00464
Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic ...
 4-148 8.73e-49

Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.


Pssm-ID: 238260 [Multi-domain]  Cd Length: 154  Bit Score: 154.64  E-value: 8.73e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTlKTPHVISTGGGIV 83
Cdd:cd00464     2 IVLIGMMGAGKTTVGRLLAKALGLPFVDLDELIEQRAGMSIPEIFAEEGEEGFRELEREVLLLLLT-KENAVIATGGGAV 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1151266573  84 MHE----NLKGLGTTFYLKMDFETLIKRLnqKEREKRPLLNNLTQA--KELFEKRQALYEKNASFIIDARG 148
Cdd:cd00464    81 LREenrrLLLENGIVVWLDASPEELLERL--ARDKTRPLLQDEDPErlRELLEEREPLYREVADLTIDTDE 149
AroK COG0703
Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the ...
 4-162 2.01e-48

Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440467 [Multi-domain]  Cd Length: 165  Bit Score: 153.75  E-value: 2.01e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELkTLKTPHVISTGGGIV 83
Cdd:COG0703     1 IVLIGMMGAGKSTVGRLLAKRLGLPFVDTDAEIEERAGMSIPEIFAEEGEAGFRELEREVLAEL-LEEENAVIATGGGAV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573  84 MHEN----LKGLGTTFYLKMDFETLIKRLnqKEREKRPLLNN---LTQAKELFEKRQALYEKNASFIIDARGGlnnSLKQ 156
Cdd:COG0703    80 LSPEnrelLKEHGTVVYLDASPETLLERL--RRDDNRPLLQGedpRERLEELLAEREPLYREVADITVDTDGR---SPEE 154


                  ....*.
gi 1151266573 157 VLQFIA 162
Cdd:COG0703   155 VVDEIL 160
SKI pfam01202
Shikimate kinase;
10-148 2.74e-43

Shikimate kinase;


Pssm-ID: 426122 [Multi-domain]  Cd Length: 159  Bit Score: 140.80  E-value: 2.74e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573  10 MGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTlKTPHVISTGGGIVMHEN-- 87
Cdd:pfam01202   1 MGAGKSTIGRLLAKALGLPFIDTDEEIEKRTGMSIAEIFEEEGEEGFRRLESEVLKELLA-EHGLVIATGGGAVLSEEnr 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1151266573  88 --LKGLGTTFYLKMDFETLIKRLNQkeREKRPLLNNLTQAKE----LFEKRQALYEKNASFIIDARG 148
Cdd:pfam01202  80 dlLKERGIVIYLDAPLEVLLERLKR--DKTRPLLQNKDPEEEllelLFEERDPLYEEAADIVIDTDE 144
 
Name Accession Description Interval E-value
aroK PRK00131
shikimate kinase; Reviewed
 1-145 7.58e-52

shikimate kinase; Reviewed


Pssm-ID: 234654 [Multi-domain]  Cd Length: 175  Bit Score: 163.05  E-value: 7.58e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   1 MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELkTLKTPHVISTGG 80
Cdd:PRK00131    4 GPNIVLIGFMGAGKSTIGRLLAKRLGYDFIDTDHLIEARAGKSIPEIFEEEGEAAFRELEEEVLAEL-LARHNLVISTGG 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1151266573  81 GIVMHEN----LKGLGTTFYLKMDFETLIKRLNQKerEKRPLL--NNLTQA-KELFEKRQALYEKNASFIID 145
Cdd:PRK00131   83 GAVLREEnralLRERGTVVYLDASFEELLRRLRRD--RNRPLLqtNDPKEKlRDLYEERDPLYEEVADITVE 152
SK cd00464
Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic ...
 4-148 8.73e-49

Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.


Pssm-ID: 238260 [Multi-domain]  Cd Length: 154  Bit Score: 154.64  E-value: 8.73e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTlKTPHVISTGGGIV 83
Cdd:cd00464     2 IVLIGMMGAGKTTVGRLLAKALGLPFVDLDELIEQRAGMSIPEIFAEEGEEGFRELEREVLLLLLT-KENAVIATGGGAV 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1151266573  84 MHE----NLKGLGTTFYLKMDFETLIKRLnqKEREKRPLLNNLTQA--KELFEKRQALYEKNASFIIDARG 148
Cdd:cd00464    81 LREenrrLLLENGIVVWLDASPEELLERL--ARDKTRPLLQDEDPErlRELLEEREPLYREVADLTIDTDE 149
AroK COG0703
Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the ...
 4-162 2.01e-48

Shikimate kinase [Amino acid transport and metabolism]; Shikimate kinase is part of the Pathway/BioSystem: Aromatic amino acid biosynthesis


Pssm-ID: 440467 [Multi-domain]  Cd Length: 165  Bit Score: 153.75  E-value: 2.01e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELkTLKTPHVISTGGGIV 83
Cdd:COG0703     1 IVLIGMMGAGKSTVGRLLAKRLGLPFVDTDAEIEERAGMSIPEIFAEEGEAGFRELEREVLAEL-LEEENAVIATGGGAV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573  84 MHEN----LKGLGTTFYLKMDFETLIKRLnqKEREKRPLLNN---LTQAKELFEKRQALYEKNASFIIDARGGlnnSLKQ 156
Cdd:COG0703    80 LSPEnrelLKEHGTVVYLDASPETLLERL--RRDDNRPLLQGedpRERLEELLAEREPLYREVADITVDTDGR---SPEE 154


                  ....*.
gi 1151266573 157 VLQFIA 162
Cdd:COG0703   155 VVDEIL 160
SKI pfam01202
Shikimate kinase;
10-148 2.74e-43

Shikimate kinase;


Pssm-ID: 426122 [Multi-domain]  Cd Length: 159  Bit Score: 140.80  E-value: 2.74e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573  10 MGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTlKTPHVISTGGGIVMHEN-- 87
Cdd:pfam01202   1 MGAGKSTIGRLLAKALGLPFIDTDEEIEKRTGMSIAEIFEEEGEEGFRRLESEVLKELLA-EHGLVIATGGGAVLSEEnr 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1151266573  88 --LKGLGTTFYLKMDFETLIKRLNQkeREKRPLLNNLTQAKE----LFEKRQALYEKNASFIIDARG 148
Cdd:pfam01202  80 dlLKERGIVIYLDAPLEVLLERLKR--DKTRPLLQNKDPEEEllelLFEERDPLYEEAADIVIDTDE 144
PRK13947 PRK13947
shikimate kinase; Provisional
 1-145 3.58e-29

shikimate kinase; Provisional


Pssm-ID: 184412 [Multi-domain]  Cd Length: 171  Bit Score: 105.17  E-value: 3.58e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   1 MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTpHVISTGG 80
Cdd:PRK13947    1 MKNIVLIGFMGTGKTTVGKRVATTLSFGFIDTDKEIEKMTGMTVAEIFEKDGEVRFRSEEKLLVKKLARLKN-LVIATGG 79

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1151266573  81 GIVMH-ENLKGL---GTTFYLKMDFETLIKRLnqKEREKRPLL---NNLTQAKELFEKRQALYEKnASFIID 145
Cdd:PRK13947   80 GVVLNpENVVQLrknGVVICLKARPEVILRRV--GKKKSRPLLmvgDPEERIKELLKEREPFYDF-ADYTID 148
PRK13948 PRK13948
shikimate kinase; Provisional
 4-138 6.23e-25

shikimate kinase; Provisional


Pssm-ID: 184413 [Multi-domain]  Cd Length: 182  Bit Score: 94.47  E-value: 6.23e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELkTLKTPHVISTGGGIV 83
Cdd:PRK13948   13 VALAGFMGTGKSRIGWELSRALMLHFIDTDRYIERVTGKSIPEIFRHLGEAYFRRCEAEVVRRL-TRLDYAVISLGGGTF 91

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1151266573  84 MHEN----LKGLGTTFYLKMDFETLIKRLnqkEREKRPLLNN---LTQAKELFEKRQALYEK 138
Cdd:PRK13948   92 MHEEnrrkLLSRGPVVVLWASPETIYERT---RPGDRPLLQVedpLGRIRTLLNEREPVYRQ 150
PRK13946 PRK13946
shikimate kinase; Provisional
 4-138 1.12e-24

shikimate kinase; Provisional


Pssm-ID: 184411 [Multi-domain]  Cd Length: 184  Bit Score: 93.84  E-value: 1.12e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELktLK-TPHVISTGGGI 82
Cdd:PRK13946   13 VVLVGLMGAGKSTVGRRLATMLGLPFLDADTEIERAARMTIAEIFAAYGEPEFRDLERRVIARL--LKgGPLVLATGGGA 90

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1151266573  83 VMHENLKGL----GTTFYLKMDFETLIKRLNQkeREKRPLL---NNLTQAKELFEKRQALYEK 138
Cdd:PRK13946   91 FMNEETRAAiaekGISVWLKADLDVLWERVSR--RDTRPLLrtaDPKETLARLMEERYPVYAE 151
aroL PRK03731
shikimate kinase AroL;
1-162 4.90e-24

shikimate kinase AroL;


Pssm-ID: 235153 [Multi-domain]  Cd Length: 171  Bit Score: 91.93  E-value: 4.90e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   1 MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKnliDELKTLKTPH-VISTG 79
Cdd:PRK03731    2 TQPLFLVGARGCGKTTVGMALAQALGYRFVDTDQWLQSTSNMTVAEIVEREGWAGFRARES---AALEAVTAPStVIATG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573  80 GGIV--------MHENlkglGTTFYLKMDFETLIKRLNQK-EREKRPLLNNLTQAKELFE---KRQALYEKNASFIIDAR 147
Cdd:PRK03731   79 GGIIlteenrhfMRNN----GIVIYLCAPVSVLANRLEANpEEDQRPTLTGKPISEEVAEvlaEREALYREVAHHIIDAT 154

                         170
                  ....*....|....*
gi 1151266573 148 GGLNNSLKQVLQFIA 162
Cdd:PRK03731  155 QPPSQVVSEILSALA 169
aroK PRK05057
shikimate kinase AroK;
6-146 1.42e-22

shikimate kinase AroK;


Pssm-ID: 235335 [Multi-domain]  Cd Length: 172  Bit Score: 88.23  E-value: 1.42e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   6 LIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELkTLKTPHVISTGGGIVM- 84
Cdd:PRK05057    9 LVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADIGWVFDVEGEEGFRDREEKVINEL-TEKQGIVLATGGGSVKs 87

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1151266573  85 ---HENLKGLGTTFYLKMdfeTLIKRLNQKEREK-RPLLNN---LTQAKELFEKRQALYEKNASFIIDA 146
Cdd:PRK05057   88 retRNRLSARGVVVYLET---TIEKQLARTQRDKkRPLLQVddpREVLEALANERNPLYEEIADVTIRT 153
PRK13949 PRK13949
shikimate kinase; Provisional
 1-146 4.50e-22

shikimate kinase; Provisional


Pssm-ID: 140006 [Multi-domain]  Cd Length: 169  Bit Score: 86.71  E-value: 4.50e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   1 MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPhVISTGG 80
Cdd:PRK13949    1 MARIFLVGYMGAGKTTLGKALARELGLSFIDLDFFIENRFHKTVGDIFAERGEAVFRELERNMLHEVAEFEDV-VISTGG 79

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1151266573  81 GIVMH----ENLKGLGTTFYLKMDFETLIKRLNQKEREkRPLLNNLTQAK------ELFEKRQALYEKnASFIIDA 146
Cdd:PRK13949   80 GAPCFfdnmELMNASGTTVYLKVSPEVLFVRLRLAKQQ-RPLLKGKSDEElldfiiEALEKRAPFYRQ-AKIIFNA 153
PRK13951 PRK13951
bifunctional shikimate kinase AroK/3-dehydroquinate synthase AroB;
4-138 5.29e-21

bifunctional shikimate kinase AroK/3-dehydroquinate synthase AroB;


Pssm-ID: 172457 [Multi-domain]  Cd Length: 488  Bit Score: 88.42  E-value: 5.29e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTlKTPHVISTGGGIV 83
Cdd:PRK13951    3 IFLVGMMGSGKSTIGKRVSEVLDLQFIDMDEEIERREGRSVRRIFEEDGEEYFRLKEKELLRELVE-RDNVVVATGGGVV 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1151266573  84 MHENLKGL---GTTFYLKMDFETLIKRLNQkerEKRPLL-NNLTQAKELFEKRQALYEK 138
Cdd:PRK13951   82 IDPENRELlkkEKTLFLYAPPEVLMERVTT---ENRPLLrEGKERIREIWERRKQFYTE 137
PRK14021 PRK14021
bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional
 5-148 5.90e-17

bifunctional shikimate kinase/3-dehydroquinate synthase; Provisional


Pssm-ID: 184458 [Multi-domain]  Cd Length: 542  Bit Score: 76.82  E-value: 5.90e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   5 VLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLI-DELKTLKTphVISTGGGIV 83
Cdd:PRK14021   10 VIIGMMGAGKTRVGKEVAQMMRLPFADADVEIEREIGMSIPSYFEEYGEPAFREVEADVVaDMLEDFDG--IFSLGGGAP 87

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1151266573  84 MHENL-KGL-------GTTFYLKMDFETLIKRLNQKerEKRPLLNNLTQA--KELFEKRQALYEKNASFIIDARG 148
Cdd:PRK14021   88 MTPSTqHALasyiahgGRVVYLDADPKEAMERANRG--GGRPMLNGDANKrwKKLFKQRDPVFRQVANVHVHTRG 160
PLN02199 PLN02199
shikimate kinase
 4-148 1.11e-13

shikimate kinase


Pssm-ID: 177850 [Multi-domain]  Cd Length: 303  Bit Score: 67.03  E-value: 1.11e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERV-GLSVREIFEELGEDNFRMFEKnliDELKTLKTPH--VISTGG 80
Cdd:PLN02199  105 MYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMnGTSVAEIFVHHGENFFRGKET---DALKKLSSRYqvVVSTGG 181

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1151266573  81 GIVMHE-NLKGL--GTTFYLKMDFETLIKRLNQKEREKRPLLNNltqakELFEKRQALYeKNASFIIDARG 148
Cdd:PLN02199  182 GAVIRPiNWKYMhkGISIWLDVPLEALAHRIAAVGTDSRPLLHD-----ESGDAYSVAF-KRLSAIWDERG 246
PRK08154 PRK08154
anaerobic benzoate catabolism transcriptional regulator; Reviewed
 6-162 3.96e-11

anaerobic benzoate catabolism transcriptional regulator; Reviewed


Pssm-ID: 236167 [Multi-domain]  Cd Length: 309  Bit Score: 59.58  E-value: 3.96e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   6 LIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPHVISTGGGIV-- 83
Cdd:PRK08154  138 LIGLRGAGKSTLGRMLAARLGVPFVELNREIEREAGLSVSEIFALYGQEGYRRLERRALERLIAEHEEMVLATGGGIVse 217

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573  84 --MHENLKGLGTTFYLKMDFETLIKRLnqkeREK---RPLLNN---LTQAKELFEKRQALYEKnASFIIDARG-GLNNSL 154
Cdd:PRK08154  218 paTFDLLLSHCYTVWLKASPEEHMARV----RAQgdlRPMADNreaMEDLRRILASREPLYAR-ADAVVDTSGlTVAQSL 292


                  ....*...
gi 1151266573 155 KQVLQFIA 162
Cdd:PRK08154  293 ARLRELVR 300
PRK00625 PRK00625
shikimate kinase; Provisional
 4-130 7.79e-10

shikimate kinase; Provisional


Pssm-ID: 134335 [Multi-domain]  Cd Length: 173  Bit Score: 54.76  E-value: 7.79e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVG----LSVREIFEELGEDNFRMFEknlIDELKTL-KTPHVIST 78
Cdd:PRK00625    3 IFLCGLPTVGKTSFGKALAKFLSLPFFDTDDLIVSNYHgalySSPKEIYQAYGEEGFCREE---FLALTSLpVIPSIVAL 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1151266573  79 GGGIVMHEN----LKGLGTTFYLKMDFETLIKRLnqkerEKRPLLNNLTQAKELFE 130
Cdd:PRK00625   80 GGGTLMIEPsyahIRNRGLLVLLSLPIATIYQRL-----QKRGLPERLKHAPSLEE 130
COG4639 COG4639
Predicted kinase [General function prediction only];
5-35 1.09e-03

Predicted kinase [General function prediction only];


Pssm-ID: 443677 [Multi-domain]  Cd Length: 145  Bit Score: 37.12  E-value: 1.09e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1151266573   5 VLIGFMGSGKSSLAQElgLALKLEVLDTDMI 35
Cdd:COG4639     6 VLIGLPGSGKSTFARR--LFAPTEVVSSDDI 34
COG0645 COG0645
Predicted kinase, contains AAA domain [General function prediction only];
4-33 1.53e-03

Predicted kinase, contains AAA domain [General function prediction only];


Pssm-ID: 440410 [Multi-domain]  Cd Length: 164  Bit Score: 37.20  E-value: 1.53e-03
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1151266573   4 LVLI-GFMGSGKSSLAQELGLALKLEVLDTD 33
Cdd:COG0645     1 LILVcGLPGSGKSTLARALAERLGAVRLRSD 31
PRK08118 PRK08118
DNA topology modulation protein;
1-33 1.58e-03

DNA topology modulation protein;


Pssm-ID: 181235  Cd Length: 167  Bit Score: 37.28  E-value: 1.58e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1151266573   1 MQHLVLIGFMGSGKSSLAQELGLALKLEVLDTD 33
Cdd:PRK08118    1 MKKIILIGSGGSGKSTLARQLGEKLNIPVHHLD 33
AAA_33 pfam13671
AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the ...
 4-41 3.65e-03

AAA domain; This family of domains contain only a P-loop motif, that is characteriztic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.


Pssm-ID: 463952 [Multi-domain]  Cd Length: 143  Bit Score: 35.75  E-value: 3.65e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1151266573   4 LVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVG 41
Cdd:pfam13671   2 ILLVGLPGSGKSTLARRLLEELGAVRLSSDDERKRLFG 39
AAA_18 pfam13238
AAA domain;
5-121 3.67e-03

AAA domain;


Pssm-ID: 433052 [Multi-domain]  Cd Length: 128  Bit Score: 35.48  E-value: 3.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151266573   5 VLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEElgedNFRMFEKNLIDELKTLKtPHVISTGGGIV- 83
Cdd:pfam13238   2 LITGTPGVGKTTLAKELSKRLGFGDNVRDLALENGLVLGDDPETRE----SKRLDEDKLDRLLDLLE-ENAALEEGGNLi 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1151266573  84 ----MHENLKGLGT---TFYLKMDFETLIKRLNQKEREKRPLLNN 121
Cdd:pfam13238  77 idghLAELEPERAKdlvGIVLRASPEELLERLEKRGYEEAKIKEN 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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