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Conserved domains on  [gi|1162548635|gb|OPX53201|]
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starch synthase [Citrobacter portucalensis]

Protein Classification

glycogen synthase( domain architecture ID 11479085)

glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, a key step of glycogen biosynthesis

CATH:  3.40.50.2000
EC:  2.4.1.21
Gene Ontology:  GO:0009011|GO:0004373|GO:0005978
SCOP:  4002330

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
glgA PRK00654
glycogen synthase GlgA;
1-476 0e+00

glycogen synthase GlgA;


:

Pssm-ID: 234809 [Multi-domain]  Cd Length: 466  Bit Score: 753.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAGRITLLFGHfnGVGIY 80
Cdd:PRK00654    1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGD--GVPVY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  81 LIDAPHLYDRPGspyhdtnLFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGHP----AKS 156
Cdd:PRK00654   79 LIDAPHLFDRPS-------GYGYPDNGERFAFFSWAAAEFAEGLD--PRPDIVHAHDWHTGLIPALLKEKYWRgypdIKT 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 157 VFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRH 236
Cdd:PRK00654  150 VFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARS 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 237 reGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKvNDKVPLFAVVSRLTSQKGLDLVLEALPG 316
Cdd:PRK00654  230 --GKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DDDAPLFAMVSRLTEQKGLDLVLEALPE 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 317 LLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVR 396
Cdd:PRK00654  307 LLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVR 386
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 397 RTGGLADTVSDSsleNLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMTMDFSWQVAAKSYRELYYRL 476
Cdd:PRK00654  387 RTGGLADTVIDY---NPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRL 463
 
Name Accession Description Interval E-value
glgA PRK00654
glycogen synthase GlgA;
1-476 0e+00

glycogen synthase GlgA;


Pssm-ID: 234809 [Multi-domain]  Cd Length: 466  Bit Score: 753.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAGRITLLFGHfnGVGIY 80
Cdd:PRK00654    1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGD--GVPVY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  81 LIDAPHLYDRPGspyhdtnLFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGHP----AKS 156
Cdd:PRK00654   79 LIDAPHLFDRPS-------GYGYPDNGERFAFFSWAAAEFAEGLD--PRPDIVHAHDWHTGLIPALLKEKYWRgypdIKT 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 157 VFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRH 236
Cdd:PRK00654  150 VFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARS 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 237 reGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKvNDKVPLFAVVSRLTSQKGLDLVLEALPG 316
Cdd:PRK00654  230 --GKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DDDAPLFAMVSRLTEQKGLDLVLEALPE 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 317 LLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVR 396
Cdd:PRK00654  307 LLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVR 386
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 397 RTGGLADTVSDSsleNLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMTMDFSWQVAAKSYRELYYRL 476
Cdd:PRK00654  387 RTGGLADTVIDY---NPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRL 463
GlgA COG0297
Glycogen synthase [Carbohydrate transport and metabolism];
1-476 0e+00

Glycogen synthase [Carbohydrate transport and metabolism];


Pssm-ID: 440066 [Multi-domain]  Cd Length: 476  Bit Score: 703.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAG----RITLLFGHFNG 76
Cdd:COG0297     1 MKILFVASEAAPFAKTGGLADVVGALPKALAKLGHDVRVVLPGYPSIDDKLKDLEVVASLEVPLGgrtyYARVLEGPDDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  77 VGIYLIDAPHLYDRPGsPYHDTNlFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGH---- 152
Cdd:COG0297    81 VPVYFIDNPELFDRPG-PYGDPD-RDYPDNAERFAFFSRAALELLKGLD--WKPDIIHCHDWQTGLIPALLKTRYAddpf 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 153 -PAKSVFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGL 231
Cdd:COG0297   157 kRIKTVFTIHNLAYQGIFPAEILELLGLPPELFTPDGLEFYGQINFLKAGIVYADRVTTVSPTYAREIQTPEFGEGLDGL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 232 LqqRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVL 311
Cdd:COG0297   237 L--RARSGKLSGILNGIDYDVWNPATDPYLPANYSADDLEGKAANKAALQEELGLPVDPDAPLIGMVSRLTEQKGLDLLL 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 312 EALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT 391
Cdd:COG0297   315 EALDELLEEDVQLVVLGSGDPEYEEAFRELAARYPGRVAVYIGYDEALAHRIYAGADFFLMPSRFEPCGLNQMYALRYGT 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 392 LPLVRRTGGLADTVSDSsleNLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMTMDFSWQVAAKSYRE 471
Cdd:COG0297   395 VPIVRRTGGLADTVIDY---NEATGEGTGFVFDEYTAEALLAAIRRALALYRDPEAWRKLQRNAMKQDFSWEKSAKEYLE 471

                  ....*
gi 1162548635 472 LYYRL 476
Cdd:COG0297   472 LYREL 476
glgA TIGR02095
glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) ...
1-476 0e+00

glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273969 [Multi-domain]  Cd Length: 473  Bit Score: 653.56  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRG-IPDAQVVTRRDTFAGRITLLFGHF----N 75
Cdd:TIGR02095   1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEvDDQVKVVELVDLSVGPRTLYVKVFegvvE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  76 GVGIYLIDAPHLYDRPGSPYHDtnlfAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARG--HP 153
Cdd:TIGR02095  81 GVPVYFIDNPSLFDRPGGIYGD----DYPDNAERFAFFSRAAAELLSGLG--WQPDVVHAHDWHTALVPALLKAVYrpNP 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 154 AKSVFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQ 233
Cdd:TIGR02095 155 IKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLK 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 234 QRhrEGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEA 313
Cdd:TIGR02095 235 AR--SGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAA 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 314 LPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLP 393
Cdd:TIGR02095 313 LPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVP 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 394 LVRRTGGLADTVSDSSLENladGIASGFVFEDSNAWSLLRAIRRAFVLW-SRPSLWRFVQRQAMTMDFSWQVAAKSYREL 472
Cdd:TIGR02095 393 IVRRTGGLADTVVDGDPEA---ESGTGFLFEEYDPGALLAALSRALRLYrQDPSLWEALQKNAMSQDFSWDKSAKQYVEL 469

                  ....
gi 1162548635 473 YYRL 476
Cdd:TIGR02095 470 YRSL 473
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
2-475 0e+00

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 648.08  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAG----RITLLFGHFNGV 77
Cdd:cd03791     1 KVLFVTSEVAPFAKTGGLGDVAGALPKALAKLGHDVRVILPRYGQIPDELDGYLRVLGLEVKVGgrgeEVGVFELPVDGV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  78 GIYLIDAPHLYDRPGSPYhdTNLFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGHP---- 153
Cdd:cd03791    81 DYYFLDNPEFFDRPGLPG--PPGYDYPDNAERFAFFSRAALELLRRLG--FQPDIIHANDWHTALVPAYLKTRYRGpgfk 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 154 -AKSVFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLL 232
Cdd:cd03791   157 kIKTVFTIHNLAYQGLFPLDTLAELGLPPELFHIDGLEFYGQINFLKAGIVYADRVTTVSPTYAKEILTPEYGEGLDGVL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 233 qqRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVLE 312
Cdd:cd03791   237 --RARAGKLSGILNGIDYDEWNPATDKLIPANYSANDLEGKAENKAALQKELGLPVDPDAPLFGFVGRLTEQKGVDLILD 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 313 ALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL 392
Cdd:cd03791   315 ALPELLEEGGQLVVLGSGDPEYEQAFRELAERYPGKVAVVIGFDEALAHRIYAGADFFLMPSRFEPCGLVQMYAMRYGTL 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 393 PLVRRTGGLADTVSDSsleNLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMTMDFSWQVAAKSYREL 472
Cdd:cd03791   395 PIVRRTGGLADTVFDY---DPETGEGTGFVFEDYDAEALLAALRRALALYRNPELWRKLQKNAMKQDFSWDKSAKEYLEL 471

                  ...
gi 1162548635 473 YYR 475
Cdd:cd03791   472 YRS 474
Glyco_transf_5 pfam08323
Starch synthase catalytic domain;
3-234 1.02e-97

Starch synthase catalytic domain;


Pssm-ID: 400563 [Multi-domain]  Cd Length: 239  Bit Score: 293.85  E-value: 1.02e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   3 VLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAG------RITLLFGHFNG 76
Cdd:pfam08323   1 ILFVASEVAPFAKTGGLADVVGALPKALAALGHDVRVIMPRYGNIPEERNQLEDVIRLSVAAGvpvrplTVGVARLELDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  77 VGIYLIDAPHLYDRPGsPYHDTNlFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGHP--- 153
Cdd:pfam08323  81 VDVYFLDNPDYFDRPG-LYGDDG-RDYEDNAERFAFFSRAALELAKKLG--WIPDIIHCHDWHTALVPAYLKEAYADdpf 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 154 --AKSVFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGL 231
Cdd:pfam08323 157 knIKTVFTIHNLAYQGRFPADLLDLLGLPPEDFNLDGLEFYGQINFLKAGIVYADAVTTVSPTYAEEIQTPEFGGGLDGL 236

                  ...
gi 1162548635 232 LQQ 234
Cdd:pfam08323 237 LRE 239
 
Name Accession Description Interval E-value
glgA PRK00654
glycogen synthase GlgA;
1-476 0e+00

glycogen synthase GlgA;


Pssm-ID: 234809 [Multi-domain]  Cd Length: 466  Bit Score: 753.11  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAGRITLLFGHfnGVGIY 80
Cdd:PRK00654    1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGD--GVPVY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  81 LIDAPHLYDRPGspyhdtnLFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGHP----AKS 156
Cdd:PRK00654   79 LIDAPHLFDRPS-------GYGYPDNGERFAFFSWAAAEFAEGLD--PRPDIVHAHDWHTGLIPALLKEKYWRgypdIKT 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 157 VFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRH 236
Cdd:PRK00654  150 VFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARS 229
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 237 reGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKvNDKVPLFAVVSRLTSQKGLDLVLEALPG 316
Cdd:PRK00654  230 --GKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLP-DDDAPLFAMVSRLTEQKGLDLVLEALPE 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 317 LLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVR 396
Cdd:PRK00654  307 LLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVR 386
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 397 RTGGLADTVSDSsleNLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMTMDFSWQVAAKSYRELYYRL 476
Cdd:PRK00654  387 RTGGLADTVIDY---NPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRL 463
GlgA COG0297
Glycogen synthase [Carbohydrate transport and metabolism];
1-476 0e+00

Glycogen synthase [Carbohydrate transport and metabolism];


Pssm-ID: 440066 [Multi-domain]  Cd Length: 476  Bit Score: 703.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAG----RITLLFGHFNG 76
Cdd:COG0297     1 MKILFVASEAAPFAKTGGLADVVGALPKALAKLGHDVRVVLPGYPSIDDKLKDLEVVASLEVPLGgrtyYARVLEGPDDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  77 VGIYLIDAPHLYDRPGsPYHDTNlFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGH---- 152
Cdd:COG0297    81 VPVYFIDNPELFDRPG-PYGDPD-RDYPDNAERFAFFSRAALELLKGLD--WKPDIIHCHDWQTGLIPALLKTRYAddpf 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 153 -PAKSVFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGL 231
Cdd:COG0297   157 kRIKTVFTIHNLAYQGIFPAEILELLGLPPELFTPDGLEFYGQINFLKAGIVYADRVTTVSPTYAREIQTPEFGEGLDGL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 232 LqqRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVL 311
Cdd:COG0297   237 L--RARSGKLSGILNGIDYDVWNPATDPYLPANYSADDLEGKAANKAALQEELGLPVDPDAPLIGMVSRLTEQKGLDLLL 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 312 EALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT 391
Cdd:COG0297   315 EALDELLEEDVQLVVLGSGDPEYEEAFRELAARYPGRVAVYIGYDEALAHRIYAGADFFLMPSRFEPCGLNQMYALRYGT 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 392 LPLVRRTGGLADTVSDSsleNLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMTMDFSWQVAAKSYRE 471
Cdd:COG0297   395 VPIVRRTGGLADTVIDY---NEATGEGTGFVFDEYTAEALLAAIRRALALYRDPEAWRKLQRNAMKQDFSWEKSAKEYLE 471

                  ....*
gi 1162548635 472 LYYRL 476
Cdd:COG0297   472 LYREL 476
glgA TIGR02095
glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) ...
1-476 0e+00

glycogen/starch synthase, ADP-glucose type; This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273969 [Multi-domain]  Cd Length: 473  Bit Score: 653.56  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRG-IPDAQVVTRRDTFAGRITLLFGHF----N 75
Cdd:TIGR02095   1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEvDDQVKVVELVDLSVGPRTLYVKVFegvvE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  76 GVGIYLIDAPHLYDRPGSPYHDtnlfAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARG--HP 153
Cdd:TIGR02095  81 GVPVYFIDNPSLFDRPGGIYGD----DYPDNAERFAFFSRAAAELLSGLG--WQPDVVHAHDWHTALVPALLKAVYrpNP 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 154 AKSVFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQ 233
Cdd:TIGR02095 155 IKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLK 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 234 QRhrEGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEA 313
Cdd:TIGR02095 235 AR--SGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAA 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 314 LPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLP 393
Cdd:TIGR02095 313 LPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVP 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 394 LVRRTGGLADTVSDSSLENladGIASGFVFEDSNAWSLLRAIRRAFVLW-SRPSLWRFVQRQAMTMDFSWQVAAKSYREL 472
Cdd:TIGR02095 393 IVRRTGGLADTVVDGDPEA---ESGTGFLFEEYDPGALLAALSRALRLYrQDPSLWEALQKNAMSQDFSWDKSAKQYVEL 469

                  ....
gi 1162548635 473 YYRL 476
Cdd:TIGR02095 470 YRSL 473
GT5_Glycogen_synthase_DULL1-like cd03791
Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 ...
2-475 0e+00

Glycogen synthase GlgA and similar proteins; This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.


Pssm-ID: 340822 [Multi-domain]  Cd Length: 474  Bit Score: 648.08  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAG----RITLLFGHFNGV 77
Cdd:cd03791     1 KVLFVTSEVAPFAKTGGLGDVAGALPKALAKLGHDVRVILPRYGQIPDELDGYLRVLGLEVKVGgrgeEVGVFELPVDGV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  78 GIYLIDAPHLYDRPGSPYhdTNLFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGHP---- 153
Cdd:cd03791    81 DYYFLDNPEFFDRPGLPG--PPGYDYPDNAERFAFFSRAALELLRRLG--FQPDIIHANDWHTALVPAYLKTRYRGpgfk 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 154 -AKSVFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLL 232
Cdd:cd03791   157 kIKTVFTIHNLAYQGLFPLDTLAELGLPPELFHIDGLEFYGQINFLKAGIVYADRVTTVSPTYAKEILTPEYGEGLDGVL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 233 qqRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVLE 312
Cdd:cd03791   237 --RARAGKLSGILNGIDYDEWNPATDKLIPANYSANDLEGKAENKAALQKELGLPVDPDAPLFGFVGRLTEQKGVDLILD 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 313 ALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL 392
Cdd:cd03791   315 ALPELLEEGGQLVVLGSGDPEYEQAFRELAERYPGKVAVVIGFDEALAHRIYAGADFFLMPSRFEPCGLVQMYAMRYGTL 394
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 393 PLVRRTGGLADTVSDSsleNLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMTMDFSWQVAAKSYREL 472
Cdd:cd03791   395 PIVRRTGGLADTVFDY---DPETGEGTGFVFEDYDAEALLAALRRALALYRNPELWRKLQKNAMKQDFSWDKSAKEYLEL 471

                  ...
gi 1162548635 473 YYR 475
Cdd:cd03791   472 YRS 474
PRK14099 PRK14099
glycogen synthase GlgA;
1-476 0e+00

glycogen synthase GlgA;


Pssm-ID: 237610 [Multi-domain]  Cd Length: 485  Bit Score: 554.33  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTR-RDTFAGRITLLFGHFNGVGI 79
Cdd:PRK14099    4 LRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSfPDLFGGPARLLAARAGGLDL 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  80 YLIDAPHLYDRPGSPYHDTNLFAYTDNVQRFALLGWVGCEMACGLDPFWRPDVVHAHDWHAGLAPAYLAARGHPA-KSVF 158
Cdd:PRK14099   84 FVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPApGTVF 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 159 TVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRhrE 238
Cdd:PRK14099  164 TIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQR--A 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 239 GRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEALPGLL 318
Cdd:PRK14099  242 DRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLL 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 319 EQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRT 398
Cdd:PRK14099  322 GEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARV 401
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1162548635 399 GGLADTVSDSSLENLADGIASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMTMDFSWQVAAKSYRELYYRL 476
Cdd:PRK14099  402 GGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGMTTDVSWRNPAQHYAALYRSL 479
Glyco_transf_5 pfam08323
Starch synthase catalytic domain;
3-234 1.02e-97

Starch synthase catalytic domain;


Pssm-ID: 400563 [Multi-domain]  Cd Length: 239  Bit Score: 293.85  E-value: 1.02e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   3 VLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAQVVTRRDTFAG------RITLLFGHFNG 76
Cdd:pfam08323   1 ILFVASEVAPFAKTGGLADVVGALPKALAALGHDVRVIMPRYGNIPEERNQLEDVIRLSVAAGvpvrplTVGVARLELDG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  77 VGIYLIDAPHLYDRPGsPYHDTNlFAYTDNVQRFALLGWVGCEMACGLDpfWRPDVVHAHDWHAGLAPAYLAARGHP--- 153
Cdd:pfam08323  81 VDVYFLDNPDYFDRPG-LYGDDG-RDYEDNAERFAFFSRAALELAKKLG--WIPDIIHCHDWHTALVPAYLKEAYADdpf 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 154 --AKSVFTVHNLAYQGMFYAKHMDDIQLPWSFFNVHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGL 231
Cdd:pfam08323 157 knIKTVFTIHNLAYQGRFPADLLDLLGLPPEDFNLDGLEFYGQINFLKAGIVYADAVTTVSPTYAEEIQTPEFGGGLDGL 236

                  ...
gi 1162548635 232 LQQ 234
Cdd:pfam08323 237 LRE 239
PRK14098 PRK14098
starch synthase;
2-476 1.11e-82

starch synthase;


Pssm-ID: 172588 [Multi-domain]  Cd Length: 489  Bit Score: 263.90  E-value: 1.11e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   2 QVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFP----------DIRRgIPDAQVVTRRDTF-------- 63
Cdd:PRK14098    7 KVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGtindrkfrlhDVLR-LSDIEVPLKEKTDllhvkvta 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  64 --AGRITLLF----GHFNGVGIYlIDAPHLYDRPGSpyhdtnlfayTDNVQRFAL--------LGWvgcemacgldpfwR 129
Cdd:PRK14098   86 lpSSKIQTYFlyneKYFKRNGLF-TDMSLGGDLKGS----------AEKVIFFNVgvletlqrLGW-------------K 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 130 PDVVHAHDWHAGLAPAYLAAR--GHP----AKSVFTVHNLAYQGMFYAKHMDDIqLPWSFFNvhGLEF-NGQISFLKAGL 202
Cdd:PRK14098  142 PDIIHCHDWYAGLVPLLLKTVyaDHEffkdIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCS--GLHReGDEVNMLYTGV 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 203 YYADHITAVSPTYAREIT-EPQFAYGMEGLLQQRhrEGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQ 281
Cdd:PRK14098  219 EHADLLTTTSPRYAEEIAgDGEEAFGLDKVLEER--KMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALL 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 282 IAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSH 361
Cdd:PRK14098  297 EEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFH 376
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 362 RIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVsdsslENLADGIASGFVFEDSNAWSLLRAIRRAFVL 441
Cdd:PRK14098  377 LAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETI-----EEVSEDKGSGFIFHDYTPEALVAKLGEALAL 451
                         490       500       510
                  ....*....|....*....|....*....|....*
gi 1162548635 442 WSRPSLWRFVQRQAMTMDFSWQVAAKSYRELYYRL 476
Cdd:PRK14098  452 YHDEERWEELVLEAMERDFSWKNSAEEYAQLYREL 486
PLN02939 PLN02939
transferase, transferring glycosyl groups
1-475 1.95e-76

transferase, transferring glycosyl groups


Pssm-ID: 215507 [Multi-domain]  Cd Length: 977  Bit Score: 257.91  E-value: 1.95e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRG-IPDAQV--VTRRDTFAGRI---TLLFGHF 74
Cdd:PLN02939  482 LHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDqIRNLKVldVVVESYFDGNLfknKIWTGTV 561
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  75 NGVGIYLIDAPHlydrPGSPYHDTNLFAYTDNVQRFALLGWVGCEMAcgLDPFWRPDVVHAHDWH-AGLAPAY---LAAR 150
Cdd:PLN02939  562 EGLPVYFIEPQH----PSKFFWRAQYYGEHDDFKRFSYFSRAALELL--YQSGKKPDIIHCHDWQtAFVAPLYwdlYAPK 635
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 151 G-HPAKSVFTVHNLAYQGMFYAKHMDDIQLpwsffNVHGLE--------FNGQISFLKAGLYYADHITAVSPTYAREItE 221
Cdd:PLN02939  636 GfNSARICFTCHNFEYQGTAPASDLASCGL-----DVHQLDrpdrmqdnAHGRINVVKGAIVYSNIVTTVSPTYAQEV-R 709
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 222 PQFAYGMEGLLQQRHRegRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEEKAENKRQLQIAMGLKVND-KVPLFAVVSR 300
Cdd:PLN02939  710 SEGGRGLQDTLKFHSK--KFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADaSQPLVGCITR 787
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 301 LTSQKGLDLVLEALPGLLEQGGQLALLGAgDPV--LQEGFLAAAAEHPGQVGVQI--GYHEAFSHRIMGGADVILVPSRF 376
Cdd:PLN02939  788 LVPQKGVHLIRHAIYKTAELGGQFVLLGS-SPVphIQREFEGIADQFQSNNNIRLilKYDEALSHSIYAASDMFIIPSMF 866
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 377 EPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNAWSLLRAIRRAFVLWSR-PSLWRFVQRQA 455
Cdd:PLN02939  867 EPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRkPEVWKQLVQKD 946
                         490       500
                  ....*....|....*....|
gi 1162548635 456 MTMDFSWQVAAKSYRELYYR 475
Cdd:PLN02939  947 MNIDFSWDSSASQYEELYQR 966
PLN02316 PLN02316
synthase/transferase
1-474 8.93e-68

synthase/transferase


Pssm-ID: 215180 [Multi-domain]  Cd Length: 1036  Bit Score: 234.38  E-value: 8.93e-68
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635    1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIR-RGIPDAQVvTRRDTFAG-RITLLFGHFNGVG 78
Cdd:PLN02316   588 MHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNlSHVKDLHY-QRSYSWGGtEIKVWFGKVEGLS 666
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635   79 IYLIDAPHLYDRPGSPYhdtnlfAYTDNVQRFALLgwvgCEMACG--LDPFWRPDVVHAHDWHAglAPAYLAARGH---- 152
Cdd:PLN02316   667 VYFLEPQNGMFWAGCVY------GCRNDGERFGFF----CHAALEflLQSGFHPDIIHCHDWSS--APVAWLFKDHyahy 734
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  153 ---PAKSVFTVHNLAYQGMFYAKHMDdiqlpwsffnvhglefngqisflkaglyYADHITAVSPTYAREITepqfayGME 229
Cdd:PLN02316   735 glsKARVVFTIHNLEFGANHIGKAMA----------------------------YADKATTVSPTYSREVS------GNS 780
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  230 GLLQQRHRegrLSGVLNGVDEKIWSPETDLLLASRYTRD-TLEEKAENKRQLQIAMGLKVNDKvPLFAVVSRLTSQKGLD 308
Cdd:PLN02316   781 AIAPHLYK---FHGILNGIDPDIWDPYNDNFIPVPYTSEnVVEGKRAAKEALQQRLGLKQADL-PLVGIITRLTHQKGIH 856
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  309 LVLEALPGLLEQGGQLALLG-AGDPVLQEGFLAAA----AEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQ 383
Cdd:PLN02316   857 LIKHAIWRTLERNGQVVLLGsAPDPRIQNDFVNLAnqlhSSHHDRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQ 936
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  384 LYGLKYGTLPLVRRTGGLADTVSDSSLEN---LADGI-ASGFVFEDSNAWSLLRAIRRAFVLWSRPSLW-RFVQRQAMTM 458
Cdd:PLN02316   937 LTAMRYGSIPVVRKTGGLFDTVFDVDHDKeraQAQGLePNGFSFDGADAAGVDYALNRAISAWYDGRDWfNSLCKRVMEQ 1016
                          490
                   ....*....|....*.
gi 1162548635  459 DFSWQVAAKSYRELYY 474
Cdd:PLN02316  1017 DWSWNRPALDYMELYH 1032
GT4_PimA-like cd03801
phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 ...
127-473 1.62e-22

phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.


Pssm-ID: 340831 [Multi-domain]  Cd Length: 366  Bit Score: 98.76  E-value: 1.62e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 127 FWRPDVVHAHDWHAGLApAYLAARGHPAKSVFTVHNLAYQGMFYAKHmddIQLPWsffnvhglefngqISFLKAGLYYAD 206
Cdd:cd03801    80 LRKFDVVHAHGLLAALL-AALLALLLGAPLVVTLHGAEPGRLLLLLA---AERRL-------------LARAEALLRRAD 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 207 HITAVSPTYAREITEpqfAYGMEgllqqrhrEGRLSGVLNGVDEKIWSPETDLllasrytrdtleekaenkrqlqiamGL 286
Cdd:cd03801   143 AVIAVSEALRDELRA---LGGIP--------PEKIVVIPNGVDLERFSPPLRR-------------------------KL 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 287 KVNDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALL--GAGDPVLQEgflaaAAEHPGQVGVQIGYHEAFS---- 360
Cdd:cd03801   187 GIPPDRPVLLFVGRLSPRKGVDLLLEALAKLLRRGPDVRLVivGGDGPLRAE-----LEELELGLGDRVRFLGFVPdeel 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 361 HRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVsdsslenlADGIAsGFVFEDSNAWSLLRAIRRAfv 440
Cdd:cd03801   262 PALYAAADVFVLPSRYEGFGLVVLEAMAAGLPVVATDVGGLPEVV--------EDGEG-GLVVPPDDVEALADALLRL-- 330
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1162548635 441 LWSRPSLWRFVQ--RQAMTMDFSWQVAAKSYRELY 473
Cdd:cd03801   331 LADPELRARLGRaaRERVAERFSWERVAERLLDLY 365
Glycos_transf_1 pfam00534
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ...
291-438 4.14e-14

Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.


Pssm-ID: 425737 [Multi-domain]  Cd Length: 158  Bit Score: 69.61  E-value: 4.14e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQ-IGY--HEAFsHRIMGGA 367
Cdd:pfam00534   1 KKKIILFVGRLEPEKGLDLLIKAFALLKEKNPNLKLVIAGDGEEEKRLKKLAEKLGLGDNVIfLGFvsDEDL-PELLKIA 79
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1162548635 368 DVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVsdsslenlADGIAsGFVFEDSNAWSLLRAIRRA 438
Cdd:pfam00534  80 DVFVLPSRYEGFGIVLLEAMACGLPVIASDVGGPPEVV--------KDGET-GFLVKPNNAEALAEAIDKL 141
GT4_WavL-like cd03819
Vibrio cholerae WavL and similar sequences; This family is most closely related to the GT4 ...
88-475 3.09e-13

Vibrio cholerae WavL and similar sequences; This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.


Pssm-ID: 340846 [Multi-domain]  Cd Length: 345  Bit Score: 70.85  E-value: 3.09e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  88 YDRPGSPYHDTNLFAYTDNVQRFALLGWVgcemacgldpfWRPDVVHAHDWHAGLApAYLAARGHPAKSVFTVHNLAyqg 167
Cdd:cd03819    46 QIGIGLPGLKVPLLRALLGNVRLARLIRR-----------ERIDLIHAHSRAPAWL-GWLASRLTGVPLVTTVHGSY--- 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 168 mfyakhmddiqlpwsFFNVHGLEFngqisfLKAGLYYADHITAVSPtYAREITEPQFAYGmegllqqrhrEGRLSGVLNG 247
Cdd:cd03819   111 ---------------LATYHPKDF------ALAVRARGDRVIAVSE-LVRDHLIEALGVD----------PERIRVIPNG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 248 VDEKIWSPETdlllasrytrdtleeKAENKRQLQIAmglkvnDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALL 327
Cdd:cd03819   159 VDTDRFPPEA---------------EAEERAQLGLP------EGKPVVGYVGRLSPEKGWLLLVDAAAELKDEPDFRLLV 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 328 gAGDPvLQEGFLAAAAEHPG---QVGVqIGYHEAfSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADT 404
Cdd:cd03819   218 -AGDG-PERDEIRRLVERLGlrdRVTF-TGFRED-VPAALAASDVVVLPSLHEEFGRVALEAMACGTPVVATDVGGAREI 293
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1162548635 405 VsdsslENLADGIASgfVFEDSNAwsLLRAIRRAFVLwsrPSLWRFVQRQAMTmdfswqvaAKSYRELYYR 475
Cdd:cd03819   294 V-----VHGRTGLLV--PPGDAEA--LADAIRAAKLL---PEAREKLQAAAAL--------TEAVRELLLR 344
GT4_WlbH-like cd03798
Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the ...
66-476 1.39e-10

Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.


Pssm-ID: 340828 [Multi-domain]  Cd Length: 376  Bit Score: 62.78  E-value: 1.39e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  66 RITLLFGHFNGVGIYLIDAPHLYDRPGSPYHDTNLFAYTDNVQRFALLGWvgcEMACGLDPF--WRPDVVHAH-DWHAGL 142
Cdd:cd03798    33 DVEVLAPAPWGPAAARLLRKLLGEAVPPRDGRRLLPLKPRLRLLAPLRAP---SLAKLLKRRrrGPPDLIHAHfAYPAGF 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 143 APAYLAAR-GHPAksVFTVHnlayqGMFYAKHMddiqlPWSffnvhglefnGQISFLKAGLYYADHITAVSptyaREITE 221
Cdd:cd03798   110 AAALLARLyGVPY--VVTEH-----GSDINVFP-----PRS----------LLRKLLRWALRRAARVIAVS----KALAE 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 222 PQFAYGMegllqqrhREGRLSGVLNGVDEKIWSPETDlllasrytrdtleekaenkrqlqiamGLKVNDKVPLFAVVSRL 301
Cdd:cd03798   164 ELVALGV--------PRDRVDVIPNGVDPARFQPEDR--------------------------GLGLPLDAFVILFVGRL 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 302 TSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEgFLAAAAEHPGqVGVQIGYHEAFSH----RIMGGADVILVPSRFE 377
Cdd:cd03798   210 IPRKGIDLLLEAFARLAKARPDVVLLIVGDGPLRE-ALRALAEDLG-LGDRVTFTGRLPHeqvpAYYRACDVFVLPSRHE 287
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 378 PCGLTQLYGLKYGTLPLVRRTGGLADTVSDSslenladgiASGFVFEDSNAWSLLRAIRRAFVLWSRPSLWRfVQRQAMT 457
Cdd:cd03798   288 GFGLVLLEAMACGLPVVATDVGGIPEVVGDP---------ETGLLVPPGDADALAAALRRALAEPYLRELGE-AARARVA 357
                         410
                  ....*....|....*....
gi 1162548635 458 MDFSWQVAAKSYRELYYRL 476
Cdd:cd03798   358 ERFSWVKAADRIAAAYRDV 376
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
363-476 1.73e-10

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 58.46  E-value: 1.73e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 363 IMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSslenladgiASGFVFEDSNAWSLLRAIRRafvLW 442
Cdd:COG0438    17 LLAAADVFVLPSRSEGFGLVLLEAMAAGLPVIATDVGGLPEVIEDG---------ETGLLVPPGDPEALAEAILR---LL 84
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1162548635 443 SRPSLWRFVQ---RQAMTMDFSWQVAAKSYRELYYRL 476
Cdd:COG0438    85 EDPELRRRLGeaaRERAEERFSWEAIAERLLALYEEL 121
GT4_sucrose_synthase cd03800
sucrose-phosphate synthase and similar proteins; This family is most closely related to the ...
118-469 2.41e-10

sucrose-phosphate synthase and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.


Pssm-ID: 340830 [Multi-domain]  Cd Length: 398  Bit Score: 62.26  E-value: 2.41e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 118 CEMACGLDPFWR-----PDVVHAHDWHAGLApAYLAARGHPAKSVFTVHNLA---YQgmfyakHMDDIqlpWSFFnvhgl 189
Cdd:cd03800    85 EEFADGLLRFIAreggrYDLIHSHYWDSGLV-GALLARRLGVPLVHTFHSLGrvkYR------HLGAQ---DTYH----- 149
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 190 eFNGQISFLKAGLYYADHITAvsptyareiTEPQFAYGMEGLLQQRhrEGRLSGVLNGVDEKIWSPETDlllasrytrdt 269
Cdd:cd03800   150 -PSLRITAEEQILEAADRVIA---------STPQEADELISLYGAD--PSRINVVPPGVDLERFFPVDR----------- 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 270 leekAENKRqlqIAMGLKVNDKVPLFavVSRLTSQKGLDLVLEALpGLLEQGGQLALL-----GAGDPVLQEGFLAAAAE 344
Cdd:cd03800   207 ----AEARR---ARLLLPPDKPVVLA--LGRLDPRKGIDTLVRAF-AQLPELRELANLvlvggPSDDPLSMDREELAELA 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 345 HPGQVGVQIGYHEAFSHRIMG----GADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVsdsslenlADGIaSG 420
Cdd:cd03800   277 EELGLIDRVRFPGRVSRDDLPelyrAADVFVVPSLYEPFGLTAIEAMACGTPVVATAVGGLQDIV--------RDGR-TG 347
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1162548635 421 FVFEDSNAWSLLRAIRRAFvlwSRPSLWRFVQRQAM---TMDFSWQVAAKSY 469
Cdd:cd03800   348 LLVDPHDPEALAAALRRLL---DDPALWQRLSRAGLeraRAHYTWESVADQL 396
Glycosyltransferase_GTB-type cd01635
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
297-407 5.66e-10

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340816 [Multi-domain]  Cd Length: 235  Bit Score: 59.34  E-value: 5.66e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 297 VVSRLTSQKGLDLVLEALPGLLEQGG--QLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGY-HEAFSHRIMGGADVILVP 373
Cdd:cd01635   115 SVGRLVPEKGIDLLLEALALLKARLPdlVLVLVGGGGEREEEEALAAALGLLERVVIIGGLvDDEVLELLLAAADVFVLP 194
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1162548635 374 SRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407
Cdd:cd01635   195 SRSEGFGLVLLEAMAAGKPVIATDVGGIPEFVVD 228
GT4_ExpE7-like cd03823
glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 ...
258-473 2.51e-09

glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).


Pssm-ID: 340850 [Multi-domain]  Cd Length: 357  Bit Score: 58.88  E-value: 2.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 258 DLLLA-SRYTRDTLEEK-AENKRQLQIAMGLKVNDKVPL----------FAVVSRLTSQKGLDLVLEALPGLLEQGGQLA 325
Cdd:cd03823   145 DAVLApSRFTANLHEANgLFSARISVIPNAVEPDLAPPPrrrpgterlrFGYIGRLTEEKGIDLLVEAFKRLPREDIELV 224
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 326 LLGAGdPVLQEGFLAAaaehpgqvGVQIGYHEAFSH----RIMGGADVILVPSRF-EPCGLTQLYGLKYGTLPLVRRTGG 400
Cdd:cd03823   225 IAGHG-PLSDERQIEG--------GRRIAFLGRVPTddikDFYEKIDVLVVPSIWpEPFGLVVREAIAAGLPVIASDLGG 295
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1162548635 401 LADTVSDSslenladgiASGFVFEDSNAWSLLRAIRRafvLWSRPSLWRFVQRQAMTMDFSWQVAAKsYRELY 473
Cdd:cd03823   296 IAELIQPG---------VNGLLFAPGDAEDLAAAMRR---LLTDPALLERLRAGAEPPRSTESQAEE-YLKLY 355
Glyco_transf_4 pfam13439
Glycosyltransferase Family 4;
128-249 1.83e-08

Glycosyltransferase Family 4;


Pssm-ID: 463877 [Multi-domain]  Cd Length: 169  Bit Score: 53.69  E-value: 1.83e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 128 WRPDVVHAHDWHAGLAPAYLAARGHPAKSVFTVHNLAYQGMFYAKHMDDIQLPWsffnvhglefngqISFLKAGLYYADH 207
Cdd:pfam13439  70 ERPDVVHAHSPFPLGLAALAARLRLGIPLVVTYHGLFPDYKRLGARLSPLRRLL-------------RRLERRLLRRADR 136
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1162548635 208 ITAVSPTYAREITEpqfAYGMegllqqrhREGRLSGVLNGVD 249
Cdd:pfam13439 137 VIAVSEAVADELRR---LYGV--------PPEKIRVIPNGVD 167
GT4_MtfB-like cd03809
glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to ...
129-471 4.40e-07

glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.


Pssm-ID: 340838 [Multi-domain]  Cd Length: 362  Bit Score: 51.98  E-value: 4.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 129 RPDVVHAHDWHAGLapaylaaRGHPAKSVFTVHNLAYqgMFYAKHMddiqlPWSFFNVHGLefngqisFLKAGLYYADHI 208
Cdd:cd03809    84 KPDLLHSPHNTAPL-------LLKGCPQVVTIHDLIP--LRYPEFF-----PKRFRLYYRL-------LLPISLRRADAI 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 209 TAVSPTYAREITEpqFaYGMegllqqrhREGRLSGVLNGVDEKIWSPETDLLLASRYtrdtleekaenkrqlqiamglkv 288
Cdd:cd03809   143 ITVSEATRDDIIK--F-YGV--------PPEKIVVIPLGVDPSFFPPESAAVLIAKY----------------------- 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 289 NDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALL---GAGDPVLQEGFLAAAAEHPGQVgVQIGY------HEAF 359
Cdd:cd03809   189 LLPEPYFLYVGTLEPRKNHERLLKAFALLKKQGGDLKLVivgGKGWEDEELLDLVKKLGLGGRV-RFLGYvsdedlPALY 267
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 360 SHrimggADVILVPSRFEPCGLTQLYGLKYGTlPLVrrtggladtVSD-SSLENLADGiaSGFVFEDSNAWSLLRAIRRa 438
Cdd:cd03809   268 RG-----ARAFVFPSLYEGFGLPVLEAMACGT-PVI---------ASNiSVLPEVAGD--AALYFDPLDPESIADAILR- 329
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1162548635 439 fvLWSRPSLwrfvqRQAMTMD-------FSWQVAAKSYRE 471
Cdd:cd03809   330 --LLEDPSL-----REELIRKglerakkFSWEKTAEKTLE 362
Glyco_trans_4_4 pfam13579
Glycosyl transferase 4-like domain;
17-221 1.71e-06

Glycosyl transferase 4-like domain;


Pssm-ID: 433325 [Multi-domain]  Cd Length: 158  Bit Score: 47.78  E-value: 1.71e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  17 GGLADVIGALPAAQIADGVDARVLLPAFPDIRRGIPDAqvvtrrdtfagritllfghfnGVGIYLIDAPHLYDRPGSPyh 96
Cdd:pfam13579   1 GGIGVYVLELARALAALGHEVRVVTPGGPPGRPELVGD---------------------GVRVHRLPVPPRPSPLADL-- 57
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  97 dtnlfAYTDNVQRFALLgwvgcemacgldpfWRPDVVHAHDWHAGLApAYLAARGHPAKSVFTVHNLAYQGmfyakhmdd 176
Cdd:pfam13579  58 -----AALRRLRRLLRA--------------ERPDVVHAHSPTAGLA-ARLARRRRGVPLVVTVHGLALDY--------- 108
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1162548635 177 iQLPWSFFNVHGLEfngqisflKAGLYYADHITAVSPTYAREITE 221
Cdd:pfam13579 109 -GSGWKRRLARALE--------RRLLRRADAVVVVSEAEAELLRA 144
GT4_UGDG-like cd03817
UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; This family is most ...
127-429 5.13e-06

UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (EC 2.4.1.337, UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.


Pssm-ID: 340844 [Multi-domain]  Cd Length: 372  Bit Score: 48.43  E-value: 5.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 127 FWRPDVVHAHD-WHAGLApAYLAARGHPAKSVFTVHNLAYQgmfYAKHMddiQLPWSFFNVHGlefngqISFLKAGLYYA 205
Cdd:cd03817    82 ELGPDIIHTHTpFSLGKL-GLRIARKLKIPIVHTYHTMYED---YLHYI---PKGKLLVKAVV------RKLVRRFYNHT 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 206 DHITAVSPTYAREitepqfaygmeglLQQRHREGRLSGVLNGVDEKIWSPETDlllasrytrdtleekAENKRQLQIamg 285
Cdd:cd03817   149 DAVIAPSEKIKDT-------------LREYGVKGPIEVIPNGIDLDKFEKPLN---------------TEERRKLGL--- 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 286 lkvNDKVPLFAVVSRLTSQKGLDLVLEALPGLL-EQGGQLALLGAGD--PVLQEgfLAAAAEHPGQVgVQIGYHEafsHR 362
Cdd:cd03817   198 ---PPDEPILLYVGRLAKEKNIDFLLRAFAELKkEPNIKLVIVGDGPerEELKE--LARELGLADKV-IFTGFVP---RE 268
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1162548635 363 IMG----GADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSlenladgiaSGFVFEDSNAW 429
Cdd:cd03817   269 ELPeyykAADLFVFASTTETQGLVYLEAMAAGLPVVAAKDPAASELVEDGE---------NGFLFEPNDET 330
Glyco_trans_1_4 pfam13692
Glycosyl transferases group 1;
293-437 1.11e-05

Glycosyl transferases group 1;


Pssm-ID: 463957 [Multi-domain]  Cd Length: 138  Bit Score: 44.81  E-value: 1.11e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 293 PLFAVVSRLTS-QKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEgFLAAAAEHPGQVgVQIGYHEAFsHRIMGGADVIL 371
Cdd:pfam13692   2 PVILFVGRLHPnVKGVDYLLEAVPLLRKRDNDVRLVIVGDGPEEE-LEELAAGLEDRV-IFTGFVEDL-AELLAAADVFV 78
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1162548635 372 VPSRFEPCGLTQLYGLKYGtLPLV-RRTGGLADTVsdsslenlaDGIAsGFVFEDSNAWSLLRAIRR 437
Cdd:pfam13692  79 LPSLYEGFGLKLLEAMAAG-LPVVaTDVGGIPELV---------DGEN-GLLVPPGDPEALAEAILR 134
GT4-like cd03814
glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family ...
293-476 6.38e-05

glycosyltransferase family 4 proteins; This family is most closely related to the GT4 family of glycosyltransferases and includes a sequence annotated as alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase from Bacillus halodurans. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes.


Pssm-ID: 340842 [Multi-domain]  Cd Length: 365  Bit Score: 44.98  E-value: 6.38e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 293 PLFAVVSRLTSQKGLDLVLEA-LPGLLEQGGQLALLGAG--DPVLQEGFLAAaaehpgqvgVQIGYH--EAFShRIMGGA 367
Cdd:cd03814   199 PLLLYVGRLAPEKNLEALLDAdLPLAASPPVRLVVVGDGpaRAELEARGPDV---------IFTGFLtgEELA-RAYASA 268
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 368 DVILVPSRFEPCGLTQLYGLKYGtLPLV-RRTGGLADTVSDSslenladgiASGFVFEDSNAWSLLRAIRRafvLWSRPS 446
Cdd:cd03814   269 DVFVFPSRTETFGLVVLEAMASG-LPVVaADAGGPRDIVRPG---------GTGALVEPGDAAAFAAALRA---LLEDPE 335
                         170       180       190
                  ....*....|....*....|....*....|
gi 1162548635 447 LwrfvqRQAMTMDFSWQVAAKSYRELYYRL 476
Cdd:cd03814   336 L-----RRRMAARARAEAERYSWEAFLDNL 360
GT4_WbuB-like cd03794
Escherichia coli WbuB and similar proteins; This family is most closely related to the GT1 ...
94-469 1.83e-04

Escherichia coli WbuB and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.


Pssm-ID: 340825 [Multi-domain]  Cd Length: 391  Bit Score: 43.87  E-value: 1.83e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635  94 PYHDTNLFAYTDNVQRFALLGWVGCemacgLDPFWRPDVVHAHDWHAGLA-PAYLAARGHPAKSVFTVHNLAYQ-----G 167
Cdd:cd03794    68 PIKKNGLIRRLLNYLSFALAALLKL-----LVREERPDVIIAYSPPITLGlAALLLKKLRGAPFILDVRDLWPEslialG 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 168 MFYAKHMDDIqlpWSFFNvhglefngqisflKAGLYYADHITAVSPTYAREItepqfaygmeglLQQRHREGRLSGVLNG 247
Cdd:cd03794   143 VLKKGSLLKL---LKKLE-------------RKLYRLADAIIVLSPGLKEYL------------LRKGVPKEKIIVIPNW 194
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 248 VDEKIWSPetdlllasrytrdtleekaeNKRQLQIAMGLKVNDKVPLFAVVsrLTSQKGLDLVLEALPGLLEQGG-QLAL 326
Cdd:cd03794   195 ADLEEFKP--------------------PPKDELRKKLGLDDKFVVVYAGN--IGKAQGLETLLEAAERLKRRPDiRFLF 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 327 LGAGDPVlqEGFLAAAAEHPGQVGVQIGY--HEAFSHrIMGGADVILVPSRFEPCGL----TQLYG-LKYGtLPLVrrtg 399
Cdd:cd03794   253 VGDGDEK--ERLKELAKARGLDNVTFLGRvpKEEVPE-LLSAADVGLVPLKDNPANRgsspSKLFEyMAAG-KPIL---- 324
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1162548635 400 GLADTVSDSSLEnlaDGIAsGFVFEDSNAWSLLRAIRRAfvLWSrPSLWRFV---QRQAMTMDFSWQVAAKSY 469
Cdd:cd03794   325 ASDDGGSDLAVE---INGC-GLVVEPGDPEALADAILEL--LDD-PELRRAMgenGRELAEEKFSREKLADRL 390
GT4_WcaC-like cd03825
putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family ...
246-476 9.46e-04

putative colanic acid biosynthesis glycosyl transferase WcaC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Escherichia coli WcaC has been predicted to function in colanic acid biosynthesis. WcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.


Pssm-ID: 340851 [Multi-domain]  Cd Length: 364  Bit Score: 41.55  E-value: 9.46e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 246 NGVDEKIWSPEtdlllasrytrdtleEKAENKRQLqiamGLKVNDKVPLFAVVSRLTSQKGLDLVLEALPGLL-EQGGQL 324
Cdd:cd03825   168 NGIDTEIFAPV---------------DKAKARKRL----GIPQDKKVILFGAESVTKPRKGFDELIEALKLLAtKDDLLL 228
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 325 ALLGAGDPVLQEGflaaaaehPGQVgVQIGY--HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLA 402
Cdd:cd03825   229 VVFGKNDPQIVIL--------PFDI-ISLGYidDDEQLVDIYSAADLFVHPSLADNLPNTLLEAMACGTPVVAFDTGGSP 299
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1162548635 403 DTVSDSSlenlaDGIASGfvFEDSNAwsLLRAIRRafVLWSRPSLWRFVQRQ--AMTMDFSWQVAAKSYRELYYRL 476
Cdd:cd03825   300 EIVQHGV-----TGYLVP--PGDVQA--LAEAIEW--LLANPKERESLGERAraLAENHFDQRVQAQRYLELYKDL 364
PRK15484 PRK15484
lipopolysaccharide N-acetylglucosaminyltransferase;
271-409 3.01e-03

lipopolysaccharide N-acetylglucosaminyltransferase;


Pssm-ID: 185381 [Multi-domain]  Cd Length: 380  Bit Score: 39.77  E-value: 3.01e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 271 EEKAENKRQlqiAMGLKVNDKVPLFAvvSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPV-LQEGFLAAAAEHPGQV 349
Cdd:PRK15484  177 SNPQPNLRQ---QLNISPDETVLLYA--GRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTaSSKGEKAAYQKKVLEA 251
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1162548635 350 GVQIGyheafSHRIMGG-------------ADVILVPSRF-EPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSS 409
Cdd:PRK15484  252 AKRIG-----DRCIMLGgqppekmhnyyplADLVVVPSQVeEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGI 320
GT4_Bme6-like cd03821
Brucella melitensis Bme6 and similar proteins; This family is most closely related to the GT4 ...
293-471 5.16e-03

Brucella melitensis Bme6 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.


Pssm-ID: 340848 [Multi-domain]  Cd Length: 377  Bit Score: 38.89  E-value: 5.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 293 PLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAG-DPVLQEGFLAAAAEHPGQVGVQIG---YHEAFShRIMGGAD 368
Cdd:cd03821   205 RIILFLGRIHPKKGLDLLIRAARKLAEQGRDWHLVIAGpDDGAYPAFLQLQSSLGLGDRVTFTgplYGEAKW-ALYASAD 283
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1162548635 369 VILVPSRFEPCGLTQLYGLKYGtLPLVrrtggladtVSDSSleNLADGI--ASGFVFeDSNAWSLLRAIRRAFVLWSRPS 446
Cdd:cd03821   284 LFVLPSYSENFGNVVAEALACG-LPVV---------ITDKC--GLSELVeaGCGVVV-DPNVSSLAEALAEALRDPADRK 350
                         170       180
                  ....*....|....*....|....*..
gi 1162548635 447 LWRFVQRQAMTMD--FSWQVAAKSYRE 471
Cdd:cd03821   351 RLGEMARRARQVEenFSWEAVAGQLGE 377
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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