|
Name |
Accession |
Description |
Interval |
E-value |
| FepD |
COG0609 |
ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and ... |
31-334 |
1.43e-88 |
|
ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440374 Cd Length: 306 Bit Score: 268.09 E-value: 1.43e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 31 AMVLGAADTSIKDVWLALTSSAKGDKI-SIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLSGGANAAL 109
Cdd:COG0609 1 SLSLGAVPISLSDVLRALLGPDGDPTAdLIVWDLRLPRVLLALLVGAALAVAGALMQGLTRNPLADPGILGVSSGAALGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 110 ALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIGmAKKGGLSPLRIVLAGAAVSAFLLAISEGVGIYFKISQ--DVSLWT 187
Cdd:COG0609 81 VLAIVLGGGLSALGLPLAAFLGALLAALLVYLLA-RRGGGLSPLRLVLAGVAVSALFSALTSLLLLLADPEQlrSIVFWL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 188 AGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVGNMAFIGL 267
Cdd:COG0609 160 MGSLAGASWDDVLLLLPVLLIGLLLALLLARALNALALGDETARSLGVNVERLRLLLLLLAALLTGAAVAVAGPIGFVGL 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1194007201 268 MVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIVRKGG 334
Cdd:COG0609 240 VVPHIARLLVGPDHRRLLPASALLGALLLLLADTLARTILAPAELPVGIVTALIGAPFFLYLLRRRR 306
|
|
| FecCD |
pfam01032 |
FecCD transport family; This is a sub-family of bacterial binding protein-dependent transport ... |
23-332 |
5.71e-72 |
|
FecCD transport family; This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.
Pssm-ID: 426003 Cd Length: 311 Bit Score: 225.48 E-value: 5.71e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 23 AFFLIFMVAMVLGAADTSIKDVWLALTSSAKGDKISIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLS 102
Cdd:pfam01032 1 LLLLLILLSLFIGAVKISPSDVFSALLGGDDSLAALIVLDLRLPRVLAALLVGAALAVSGALLQTVTRNPLADPSILGIS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 103 GGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIGMaKKGGLSPLRIVLAGAAVSAFLLAISEGVGIYF--KIS 180
Cdd:pfam01032 81 SGAALGAVLAILLGGSLSLFALPLAAFIGALLAALLVYFLSR-GRGGASPLRLILAGIAVSALLSALTSLLLLLLnpEAL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 181 QDVSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVG 260
Cdd:pfam01032 160 QSILFWLMGSLSGANWSDVLILLPLLLIGLILLLLLARKLNLLSLGDDTAKSLGVNVNRVRLLLLLLASLLTAASVAVVG 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1194007201 261 NMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIVRK 332
Cdd:pfam01032 240 PIGFVGLIVPHIARLLVGANHRRLLPLSALLGALLLLLADILARTILSPYELPVGIVTALIGAPFFIYLLLR 311
|
|
| fecC |
PRK11228 |
iron-dicitrate ABC transporter permease FecC; |
43-334 |
1.04e-51 |
|
iron-dicitrate ABC transporter permease FecC;
Pssm-ID: 183042 Cd Length: 323 Bit Score: 173.73 E-value: 1.04e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 43 DVWLALTSSAKGDKISII-REIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLSGGANAALALTLAFNPS-IS 120
Cdd:PRK11228 29 DALNALLPGHTPTLPEALvQNLRLPRSLVAVLIGASLALAGALLQTLTHNPLASPSLLGINSGAALAMALTSALSPTpFA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 121 YLYLTLACFIGAAVGAIMVFGIGMAKKGGLSPLRIVLAGAAVSAFLLAISEGVGIYFKI-SQDVSLWTAGGVIGTTWSQL 199
Cdd:PRK11228 109 GYSLAFIAACGGGLSWLLVMTAGGGWRHTHDRNRLILAGIALSALCMALTRITLLLAEDhAYGIFYWLAGGVSHARWQEV 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 200 KVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVGNMAFIGLMVPHMVRPIVGP 279
Cdd:PRK11228 189 WQLLPFVVTAVPVVLLLANQLNLLNLSDSSAHTLGVNLTRLRLVVNMLVLLLVGACVSVAGPVAFIGLLVPHLARFWIGY 268
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1194007201 280 DYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIVRKGG 334
Cdd:PRK11228 269 DQRNVLPMSMLLGATLMLLADLLARALAFPGELPAGAVLALIGAPCFVWLARRRG 323
|
|
| F420-0_ABCperm |
TIGR03869 |
proposed F420-0 ABC transporter, permease protein; his small clade of ABC-type transporter ... |
28-333 |
1.65e-46 |
|
proposed F420-0 ABC transporter, permease protein; his small clade of ABC-type transporter permease protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and an ATPase (TIGR03873). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with an F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this permease protein is a component of a F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Pssm-ID: 163581 Cd Length: 325 Bit Score: 160.41 E-value: 1.65e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 28 FMVAMVLGAADTSIKDVW------LALTSSAKGDKISIIR-----EIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADP 96
Cdd:TIGR03869 6 LVVAVTIGPADISVGEVWrsvaahLGRGEGFPGVALSRLQdaivwDLRLPRVLTAAAVGAGLAIAGAVMQSLTRNPLADP 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 97 GLLGLSGGANAALALTLAFNPSISylyLTLACFIGAAVGAIMVFGIGMAkKGGLSPLRIVLAGAAVSAFLLAISEGVgIY 176
Cdd:TIGR03869 86 YLLGLSSGASLGAVAVLVLGVAVL---LPVAAFAGALLALAATLGLART-LGTLTPTRTILAGLAVSQLCAAVTSFV-IF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 177 FKISQD----VSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLA 252
Cdd:TIGR03869 161 WSATGDsyreILSWLMGSLAGATWGSVAIAGGALLVVGLVLLASGRVLDAFAFGDSSAAALGVDVERTRWLLLTLVALLT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 253 GASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIVRK 332
Cdd:TIGR03869 241 GALVSVSGAIGFVGLILPHAVRLLTGPRHRLLLPVSALAGAVFLVWADTLARTVFAPRELPVGIITALIGAPVFAVLLYR 320
|
.
gi 1194007201 333 G 333
Cdd:TIGR03869 321 S 321
|
|
| TM_ABC_iron-siderophores_like |
cd06550 |
Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
69-330 |
4.69e-42 |
|
Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The TMs are bundles of alpha helices that transverse the cytoplasmic membrane multiple times. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Each TM has a prominent cytoplasmic loop which contacts an ABC and represents a conserved motif. The two TMs form either a homodimer (e.g. in the case of the BtuC subunits of the Escherichia coli BtuCD vitamin B12 transporter), a heterodimer (e.g. the TroC and TroD subunits of the Treponema pallidum general transition metal transporter, TroBCD), or a pseudo-heterodimer (e.g. the FhuB protein of the E. coli ferrichrome transporter, FhuBC). FhuB contains two tandem TMs which associate to form the pseudo-heterodimer. Both FhuB TMs are found in this hierarchy.
Pssm-ID: 119348 [Multi-domain] Cd Length: 261 Bit Score: 146.93 E-value: 4.69e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 69 VAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLSGGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIgmAKKG 148
Cdd:cd06550 2 LAALLVGAALAVSGAILQSLTRNRLASPSILGISHGALLGVVLALLLGIGLSNYALGAFAFAGALAIALLVLLL--ASRG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 149 GLSPLRIVLAGAAVSAFLLAISEGVGIYF-KISQDVSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSE 227
Cdd:cd06550 80 GLSPSKLILIGIVLSAFFSAGVILISLLSdDSLQDLNIWLFGSILGVTWEDLLILLIILLLVLLLLLLLSRKLNLLTFDE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 228 EVAIGLGQKIIVIKTILFIIIILLAGASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTIN 307
Cdd:cd06550 160 DLAKSLGINVNLLRLLLLLLVALLVVAAVALVGVILFVGLIAPHLARRLFGRSHRYLLPLSALLGAILLLLGDLLSRTLL 239
|
250 260
....*....|....*....|...
gi 1194007201 308 aPYETPVAAIVAIVGLPFFLFIV 330
Cdd:cd06550 240 -PSELPVGPVTALLGAPYFLYLL 261
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| FepD |
COG0609 |
ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and ... |
31-334 |
1.43e-88 |
|
ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440374 Cd Length: 306 Bit Score: 268.09 E-value: 1.43e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 31 AMVLGAADTSIKDVWLALTSSAKGDKI-SIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLSGGANAAL 109
Cdd:COG0609 1 SLSLGAVPISLSDVLRALLGPDGDPTAdLIVWDLRLPRVLLALLVGAALAVAGALMQGLTRNPLADPGILGVSSGAALGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 110 ALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIGmAKKGGLSPLRIVLAGAAVSAFLLAISEGVGIYFKISQ--DVSLWT 187
Cdd:COG0609 81 VLAIVLGGGLSALGLPLAAFLGALLAALLVYLLA-RRGGGLSPLRLVLAGVAVSALFSALTSLLLLLADPEQlrSIVFWL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 188 AGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVGNMAFIGL 267
Cdd:COG0609 160 MGSLAGASWDDVLLLLPVLLIGLLLALLLARALNALALGDETARSLGVNVERLRLLLLLLAALLTGAAVAVAGPIGFVGL 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1194007201 268 MVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIVRKGG 334
Cdd:COG0609 240 VVPHIARLLVGPDHRRLLPASALLGALLLLLADTLARTILAPAELPVGIVTALIGAPFFLYLLRRRR 306
|
|
| FecCD |
pfam01032 |
FecCD transport family; This is a sub-family of bacterial binding protein-dependent transport ... |
23-332 |
5.71e-72 |
|
FecCD transport family; This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.
Pssm-ID: 426003 Cd Length: 311 Bit Score: 225.48 E-value: 5.71e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 23 AFFLIFMVAMVLGAADTSIKDVWLALTSSAKGDKISIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLS 102
Cdd:pfam01032 1 LLLLLILLSLFIGAVKISPSDVFSALLGGDDSLAALIVLDLRLPRVLAALLVGAALAVSGALLQTVTRNPLADPSILGIS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 103 GGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIGMaKKGGLSPLRIVLAGAAVSAFLLAISEGVGIYF--KIS 180
Cdd:pfam01032 81 SGAALGAVLAILLGGSLSLFALPLAAFIGALLAALLVYFLSR-GRGGASPLRLILAGIAVSALLSALTSLLLLLLnpEAL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 181 QDVSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVG 260
Cdd:pfam01032 160 QSILFWLMGSLSGANWSDVLILLPLLLIGLILLLLLARKLNLLSLGDDTAKSLGVNVNRVRLLLLLLASLLTAASVAVVG 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1194007201 261 NMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIVRK 332
Cdd:pfam01032 240 PIGFVGLIVPHIARLLVGANHRRLLPLSALLGALLLLLADILARTILSPYELPVGIVTALIGAPFFIYLLLR 311
|
|
| fecC |
PRK11228 |
iron-dicitrate ABC transporter permease FecC; |
43-334 |
1.04e-51 |
|
iron-dicitrate ABC transporter permease FecC;
Pssm-ID: 183042 Cd Length: 323 Bit Score: 173.73 E-value: 1.04e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 43 DVWLALTSSAKGDKISII-REIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLSGGANAALALTLAFNPS-IS 120
Cdd:PRK11228 29 DALNALLPGHTPTLPEALvQNLRLPRSLVAVLIGASLALAGALLQTLTHNPLASPSLLGINSGAALAMALTSALSPTpFA 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 121 YLYLTLACFIGAAVGAIMVFGIGMAKKGGLSPLRIVLAGAAVSAFLLAISEGVGIYFKI-SQDVSLWTAGGVIGTTWSQL 199
Cdd:PRK11228 109 GYSLAFIAACGGGLSWLLVMTAGGGWRHTHDRNRLILAGIALSALCMALTRITLLLAEDhAYGIFYWLAGGVSHARWQEV 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 200 KVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVGNMAFIGLMVPHMVRPIVGP 279
Cdd:PRK11228 189 WQLLPFVVTAVPVVLLLANQLNLLNLSDSSAHTLGVNLTRLRLVVNMLVLLLVGACVSVAGPVAFIGLLVPHLARFWIGY 268
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1194007201 280 DYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIVRKGG 334
Cdd:PRK11228 269 DQRNVLPMSMLLGATLMLLADLLARALAFPGELPAGAVLALIGAPCFVWLARRRG 323
|
|
| PRK10577 |
PRK10577 |
Fe(3+)-hydroxamate ABC transporter permease FhuB; |
17-335 |
2.23e-51 |
|
Fe(3+)-hydroxamate ABC transporter permease FhuB;
Pssm-ID: 236720 [Multi-domain] Cd Length: 668 Bit Score: 180.42 E-value: 2.23e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 17 LILSIIAFFLIFMVAMVLGAADTSIKDVWLAltssakGDKISIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADP 96
Cdd:PRK10577 356 AWLLALGLLLLLALVVALSFGRDAHGWNWLS------GQLLDALLPLRLPRLLAALLAGAMLAVAGTLLQRLTRNPLASP 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 97 GLLGLSGGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIgmAKKGGLSPLRIVLAGAAVSAFLLAI------S 170
Cdd:PRK10577 430 EVLGISSGAGLGVVLALFLVPGAGFGWLLAAALLGALAALALILLL--ARRGGFAPERLLLTGIALSALFTALiqlllaS 507
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 171 EGVGIYFKISqdvslWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIIL 250
Cdd:PRK10577 508 GDPRAAQLLT-----WLSGSTYGVTWAQALPLLIVAVLLLALALLLRRWLDLLPLGDDTARALGLPVTRARLALLLLAAL 582
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 251 LAGASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIV 330
Cdd:PRK10577 583 LTAAATATVGPLSFVGLMAPHLARMLGGRRARPQLVLAALLGALLMVLADWLGRTLLFPYQIPAGLLAALIGAPYFLWLL 662
|
....*
gi 1194007201 331 RKGGK 335
Cdd:PRK10577 663 RRSRR 667
|
|
| PRK10441 |
PRK10441 |
Fe(3+)-siderophore ABC transporter permease; |
1-336 |
6.77e-49 |
|
Fe(3+)-siderophore ABC transporter permease;
Pssm-ID: 182464 Cd Length: 335 Bit Score: 166.81 E-value: 6.77e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 1 MTKEHDNTRSIAFTYKLILSIIAFFLifmvAMVLGAADTSIKDVWLALTSSAKGDKISIIREIRLPREVAAIFVGAGLAV 80
Cdd:PRK10441 1 MSGSVAVTRAIAVPGLLLLLIIATAL----SLLIGAKSLPASVVLEALSGTCQSADCTIVLDARLPRTLAGLLAGGALGL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 81 SGAIMQGLTRNPLADPGLLGLSGGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIGMAKKGGLSPLRIVLAGA 160
Cdd:PRK10441 77 AGALMQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 161 AVSAFLLAISEGVGIYFKISQD-VSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIV 239
Cdd:PRK10441 157 ALAAVLEGLTSGIALLNPDVYDqLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVAR 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 240 IKTILFIIIILLAGASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTInAPYETPVAAIVA 319
Cdd:PRK10441 237 TQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLL-VPGELRVSVVSA 315
|
330
....*....|....*..
gi 1194007201 320 IVGLPFFLFIVRKGGKM 336
Cdd:PRK10441 316 FIGAPVLIFLVRRKTRG 332
|
|
| BtuC |
COG4139 |
ABC-type cobalamin transport system, permease component BtuC [Coenzyme transport and ... |
15-336 |
1.74e-47 |
|
ABC-type cobalamin transport system, permease component BtuC [Coenzyme transport and metabolism];
Pssm-ID: 443314 Cd Length: 327 Bit Score: 162.71 E-value: 1.74e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 15 YKLILSIIAFFLIFMVAMVLGaadtsikDVWLALTSSAKGDKISIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLA 94
Cdd:COG4139 13 RWLLLLLLLLLLLFVLSLCAG-------EVWIPPTQWLSEAWQLFVWQLRLPRTLAAVLVGASLAVSGAVMQALFENPLA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 95 DPGLLGLSGGANAALALTLAFNPS-ISYLYLTLACFIGAAVgaIMVFGIGMAKKGgLSPLRIVLAGAAVSAFLLAISEgV 173
Cdd:COG4139 86 EPGLLGISNGAGVGLVLVVLLGGGlLPPWLLSLAAIAGALL--VTLLLLAFARRR-LSNARLLLIGVALGIICSAIMT-W 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 174 GIYFKISQDVS---LWTAGGVIGTTWSQLkVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIIL 250
Cdd:COG4139 162 AVYFSSSLDLRqlmYWMMGSFGGVDWRQL-WLLLALLPVLLWLCLQGKPLNLLLLGENQARQLGLSVHRWRNLLVLATGL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 251 LAGASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIV 330
Cdd:COG4139 241 LVGVSVALAGPIGFVGLVVPHLLRLLGTTDHRFLLPACALAGAALLLLADIIARLALSSAELPIGVVTATLGAPVFIWLL 320
|
....*.
gi 1194007201 331 RKGGKM 336
Cdd:COG4139 321 LRRRKI 326
|
|
| F420-0_ABCperm |
TIGR03869 |
proposed F420-0 ABC transporter, permease protein; his small clade of ABC-type transporter ... |
28-333 |
1.65e-46 |
|
proposed F420-0 ABC transporter, permease protein; his small clade of ABC-type transporter permease protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and an ATPase (TIGR03873). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with an F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this permease protein is a component of a F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Pssm-ID: 163581 Cd Length: 325 Bit Score: 160.41 E-value: 1.65e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 28 FMVAMVLGAADTSIKDVW------LALTSSAKGDKISIIR-----EIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADP 96
Cdd:TIGR03869 6 LVVAVTIGPADISVGEVWrsvaahLGRGEGFPGVALSRLQdaivwDLRLPRVLTAAAVGAGLAIAGAVMQSLTRNPLADP 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 97 GLLGLSGGANAALALTLAFNPSISylyLTLACFIGAAVGAIMVFGIGMAkKGGLSPLRIVLAGAAVSAFLLAISEGVgIY 176
Cdd:TIGR03869 86 YLLGLSSGASLGAVAVLVLGVAVL---LPVAAFAGALLALAATLGLART-LGTLTPTRTILAGLAVSQLCAAVTSFV-IF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 177 FKISQD----VSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLA 252
Cdd:TIGR03869 161 WSATGDsyreILSWLMGSLAGATWGSVAIAGGALLVVGLVLLASGRVLDAFAFGDSSAAALGVDVERTRWLLLTLVALLT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 253 GASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFIVRK 332
Cdd:TIGR03869 241 GALVSVSGAIGFVGLILPHAVRLLTGPRHRLLLPVSALAGAVFLVWADTLARTVFAPRELPVGIITALIGAPVFAVLLYR 320
|
.
gi 1194007201 333 G 333
Cdd:TIGR03869 321 S 321
|
|
| btuC |
PRK09535 |
cobalamin ABC transporter permease BtuC; |
59-332 |
2.13e-45 |
|
cobalamin ABC transporter permease BtuC;
Pssm-ID: 236553 Cd Length: 366 Bit Score: 158.38 E-value: 2.13e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 59 IIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLSGGANAALALTLAFnPSISYLYLTLACFIGAAVGAIM 138
Cdd:PRK09535 90 IVLQIRLPRILLAATVGFALAAAGTVMQGFFRNPMADPSIIGVSSGAAVGAVAAIVL-PLAVPFGLQAAAFAGALVAAFG 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 139 VFGIgmAKKGGLSPL-RIVLAGAAVSAFLLAISEGVGIYFKIS-QDVSLWTAGGVIGTTWSQLKVIIPVISISIFIAILL 216
Cdd:PRK09535 169 VYAI--ATENGRTPVaTLLLAGVAVQTFLGAVISYLLLHSGESlRRAVYWLMGHLHGSTWSDVEVALPVVVVGFVVLLAY 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 217 AKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFM 296
Cdd:PRK09535 247 ARDLNVLLLGEEDAHTLGIEVERTKRLLLALASVVTAAAVAVAGVIGFVGLIVPHVMRLLVGPDHRILLPTSALAGASFL 326
|
250 260 270
....*....|....*....|....*....|....*.
gi 1194007201 297 LLADTIGRTinAPYETPVAAIVAIVGLPFFLFIVRK 332
Cdd:PRK09535 327 VATDTVARS--GPAEVPVGIVTAALGAPFFLYLLRT 360
|
|
| fecD |
PRK09777 |
Fe(3+) dicitrate ABC transporter permease subunit FecD; |
17-329 |
8.89e-44 |
|
Fe(3+) dicitrate ABC transporter permease subunit FecD;
Pssm-ID: 182071 Cd Length: 318 Bit Score: 152.89 E-value: 8.89e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 17 LILSIIAFFLIFMVAMVLGAADTSIKDVWLALTSSAKGDkiSIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADP 96
Cdd:PRK09777 6 VIFITLALAGCALLSLRMGVIPLPWRALLTDWQAGDEHY--YVLMEYRLPRLLLALFVGAALAVSGVLVQGIVRNPLASP 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 97 GLLGLSGGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIGmakkGGLSPLRIVLAGAAVSAFLLAISEgvgiY 176
Cdd:PRK09777 84 DILGVNHAASLASVGALLLFPSLPVMWLPLLAFIGGMAGLILLKMLA----GTHQPMKLALTGVALSALWASLTD----Y 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 177 FKIS--QDVS---LWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILL 251
Cdd:PRK09777 156 LMLSrpQDINnalLWLTGSLWGRDWSFVKVALPWLILLLPLSLSFCRDLDLLALGDARATTLGVSVPHTQFWALLLAVAL 235
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1194007201 252 AGASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFI 329
Cdd:PRK09777 236 TATGVAACGPISFIGLVVPHLMRSLVGGRHRRLLPVSALTGALLLLLADLLARIIHPPLELPAGVLTAIIGAPWFFWL 313
|
|
| PRK10577 |
PRK10577 |
Fe(3+)-hydroxamate ABC transporter permease FhuB; |
17-333 |
1.26e-43 |
|
Fe(3+)-hydroxamate ABC transporter permease FhuB;
Pssm-ID: 236720 [Multi-domain] Cd Length: 668 Bit Score: 159.23 E-value: 1.26e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 17 LILSIIAFFLIFMVAMVLGAADTSIKDVWLALTSSAKGDKISII-REIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLAD 95
Cdd:PRK10577 14 ALLLALLLLLALALTLTQLSAALPLSQWLQALWGPDADDLEQLLlHYSRLPRLAIALLVGAALGLAGALLQQVLRNPLAS 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 96 PGLLGLSGGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIGMAKkgGLSPLRIVLAGAAVSAFLLAISEGVGI 175
Cdd:PRK10577 94 PTTLGVAAGAQLALVLATLFAPALLALASQLAAFAGGLLAAALVFALAGGK--RLSPLRLVLAGMVVSLYLGALTTLLLL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 176 YFK-ISQDVSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGA 254
Cdd:PRK10577 172 FNEqYLQGLFLWGAGSLAQNDWSGVQRLLPRLLVGLLLLLLLARPLTLLGLGDDVARSLGLAVSLTRLAALALAVLLSAA 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 255 SVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPY--ETPVAAIVAIVGLPFFLFIVRK 332
Cdd:PRK10577 252 VVSAVGPIGFIGLAAPNLARLLGARRLRARLPLSPLIGALLLLLTDQLVRLLAGVGgeLLPTGAVTALIGAPLLLWLLPR 331
|
.
gi 1194007201 333 G 333
Cdd:PRK10577 332 L 332
|
|
| FepG |
COG4779 |
ABC-type enterobactin transport system, permease component [Inorganic ion transport and ... |
25-329 |
9.38e-43 |
|
ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 443810 Cd Length: 344 Bit Score: 151.04 E-value: 9.38e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 25 FLIFMVAMVLGAADTSIKDVWLALTSSAKGDKISIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLSGG 104
Cdd:COG4779 34 LALAVLALTLGDYPLSPGDVLRALLGEGDPGASFVVLELRLPRALAALLVGAALGLSGAIFQSLTRNPLASPDIIGITAG 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 105 ANAALALTLAFNPSiSYLYLTLACFIGAAVGAIMVFgiGMAKKGGLSPLRIVLAGAAVSAFLLAISEGVGIYFKI--SQD 182
Cdd:COG4779 114 ASAGAVAAIVVLGG-SGLAVALGALAGGLATALLVY--LLAWRGGVSGYRLILVGIGVSAMLTAVNSYLLTRADLedAQS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 183 VSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGASVALVGNM 262
Cdd:COG4779 191 AAVWLTGSLNGRTWEDVLPLAVALAVLLPLALALARRLRLLELGDDTAAALGVRVERTRLLLLLVAVALAAVATAAAGPI 270
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1194007201 263 AFIGLMVPHMVRPIVGPDYRFVIPmSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFLFI 329
Cdd:COG4779 271 AFVALAAPQIARRLTRSPGPPLLP-SALVGALLLLAADLVAQHLLAPVQLPVGVVTGALGGPYLLWL 336
|
|
| TM_ABC_iron-siderophores_like |
cd06550 |
Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
69-330 |
4.69e-42 |
|
Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The TMs are bundles of alpha helices that transverse the cytoplasmic membrane multiple times. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Each TM has a prominent cytoplasmic loop which contacts an ABC and represents a conserved motif. The two TMs form either a homodimer (e.g. in the case of the BtuC subunits of the Escherichia coli BtuCD vitamin B12 transporter), a heterodimer (e.g. the TroC and TroD subunits of the Treponema pallidum general transition metal transporter, TroBCD), or a pseudo-heterodimer (e.g. the FhuB protein of the E. coli ferrichrome transporter, FhuBC). FhuB contains two tandem TMs which associate to form the pseudo-heterodimer. Both FhuB TMs are found in this hierarchy.
Pssm-ID: 119348 [Multi-domain] Cd Length: 261 Bit Score: 146.93 E-value: 4.69e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 69 VAAIFVGAGLAVSGAIMQGLTRNPLADPGLLGLSGGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFGIgmAKKG 148
Cdd:cd06550 2 LAALLVGAALAVSGAILQSLTRNRLASPSILGISHGALLGVVLALLLGIGLSNYALGAFAFAGALAIALLVLLL--ASRG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 149 GLSPLRIVLAGAAVSAFLLAISEGVGIYF-KISQDVSLWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSE 227
Cdd:cd06550 80 GLSPSKLILIGIVLSAFFSAGVILISLLSdDSLQDLNIWLFGSILGVTWEDLLILLIILLLVLLLLLLLSRKLNLLTFDE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 228 EVAIGLGQKIIVIKTILFIIIILLAGASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTIN 307
Cdd:cd06550 160 DLAKSLGINVNLLRLLLLLLVALLVVAAVALVGVILFVGLIAPHLARRLFGRSHRYLLPLSALLGAILLLLGDLLSRTLL 239
|
250 260
....*....|....*....|...
gi 1194007201 308 aPYETPVAAIVAIVGLPFFLFIV 330
Cdd:cd06550 240 -PSELPVGPVTALLGAPYFLYLL 261
|
|
| PRK03784 |
PRK03784 |
vtamin B12-transporter permease; Provisional |
17-327 |
4.85e-42 |
|
vtamin B12-transporter permease; Provisional
Pssm-ID: 235159 Cd Length: 331 Bit Score: 148.56 E-value: 4.85e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 17 LILSIIAFFLIFMVAMVLGaadtsikDVWLALTSSAKGDKISIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADP 96
Cdd:PRK03784 18 LLGLSVLLLLALLLSLCAG-------EQWISPGDWLSPRGELFVWQLRLPRTLAVLLVGAALAVSGAVMQALFENPLAEP 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 97 GLLGLSGGANAALALTLAFNPSISYLYLTLACFIGAAVGAIMVFgIGMAKKGGLSPLRIVLAGAAVSAFLLAISEGvGIY 176
Cdd:PRK03784 91 GLLGVSNGAGVALVAAVLLGQGLLPPWALSLCAIAGALLITLIL-LRFARRHRLSTSRLLLAGVALGIICSALMTW-AVY 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 177 FKISQDVSL---WTAGGVIGTTWSQlKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAG 253
Cdd:PRK03784 169 FSTSLDLRQlmyWMMGGFGGVDWRQ-SWLMLALLPVLIWLCCQGRPLNMLALGEISARQLGLPLWFWRNLLVLATGWLVG 247
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1194007201 254 ASVALVGNMAFIGLMVPHMVRPIVGPDYRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAIVAIVGLPFFL 327
Cdd:PRK03784 248 VSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASLLLLADIVARLALASAELPIGVVTATLGAPVFI 321
|
|
| PRK10440 |
PRK10440 |
iron-enterobactin ABC transporter permease; |
18-335 |
1.38e-26 |
|
iron-enterobactin ABC transporter permease;
Pssm-ID: 182463 Cd Length: 330 Bit Score: 107.49 E-value: 1.38e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 18 ILSIIAFFLIFMVAMVLGAADTSIKDVWLALTSSAKGDKISIIREIRLPREVAAIFVGAGLAVSGAIMQGLTRNPLADPG 97
Cdd:PRK10440 13 LLLLAACVAAGLWGLRSGAVTLETSQVFAALMGDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPD 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 98 LLGL-SGGANAALALTLAFNPsiSYLYLTLACFIGAAVGAIMVFgiGMAKKGGLSPLRIVLAGAAVSAFLLAISEGVGIY 176
Cdd:PRK10440 93 VMGFnTGAWSGVLVAMVLFGQ--DLTAIALAAMAGGIVTSLLVW--LLAWRNGIDTFRLIIIGIGVRAMLVAFNTWLLLK 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 177 FKISQDVS--LWTAGGVIGTTWSQLKVIIPVISISIFIAILLAKKLTVLSFSEEVAIGLGQKIIVIKTILFIIIILLAGA 254
Cdd:PRK10440 169 ASLETALTagLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLEMGDDTACALGVSVERSRLLLMLVAVVLTAA 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1194007201 255 SVALVGNMAFIGLMVPHMVRPIVGPDyRFVIPMSAIAGASFMLLADTIGRTINAPYETPVAAI-VAIVGLPFFLFIVRKG 333
Cdd:PRK10440 249 ATALAGPISFIALVAPHIARRLSGTA-RWGLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVtVSLGGIYLIVLLIQES 327
|
..
gi 1194007201 334 GK 335
Cdd:PRK10440 328 RK 329
|
|
|