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Conserved domains on  [gi|1198680711|gb|OUP62007|]
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DUF4860 domain-containing protein [Faecalitalea cylindroides]

Protein Classification

DUF4860 domain-containing protein( domain architecture ID 11241215)

DUF4860 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4860 pfam16152
Domain of unknown function (DUF4860); This family consists of uncharacterized proteins around ...
 45-137 1.07e-27

Domain of unknown function (DUF4860); This family consists of uncharacterized proteins around 160 residues in length and is mainly found in various Eubacterium and Clostridium species. The function of this family is unknown.


:

Pssm-ID: 435172  Cd Length: 98  Bit Score: 98.46  E-value: 1.07e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198680711  45 SKLYTPIAYLTQKIHSYDSQGQVTTETIDGIQCLVL----SDDQTKTYIYQKEDFLQELYVLSTSEVDLDSGQKMMSCDS 120
Cdd:pfam16152   1 YNARTALSYITEKIRQNDREGAVSVGELDGTPALVLtetiDGEVYVTYIYYYDGALRELFVREGTSLTPEDGQEILELKD 80

                          90
                  ....*....|....*...
gi 1198680711 121 FEV-QIEENVVEMKVQDQ 137
Cdd:pfam16152  81 FSIeQVSDRLLHFTVTDE 98
 
Name Accession Description Interval E-value
DUF4860 pfam16152
Domain of unknown function (DUF4860); This family consists of uncharacterized proteins around ...
 45-137 1.07e-27

Domain of unknown function (DUF4860); This family consists of uncharacterized proteins around 160 residues in length and is mainly found in various Eubacterium and Clostridium species. The function of this family is unknown.


Pssm-ID: 435172  Cd Length: 98  Bit Score: 98.46  E-value: 1.07e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198680711  45 SKLYTPIAYLTQKIHSYDSQGQVTTETIDGIQCLVL----SDDQTKTYIYQKEDFLQELYVLSTSEVDLDSGQKMMSCDS 120
Cdd:pfam16152   1 YNARTALSYITEKIRQNDREGAVSVGELDGTPALVLtetiDGEVYVTYIYYYDGALRELFVREGTSLTPEDGQEILELKD 80

                          90
                  ....*....|....*...
gi 1198680711 121 FEV-QIEENVVEMKVQDQ 137
Cdd:pfam16152  81 FSIeQVSDRLLHFTVTDE 98
 
Name Accession Description Interval E-value
DUF4860 pfam16152
Domain of unknown function (DUF4860); This family consists of uncharacterized proteins around ...
 45-137 1.07e-27

Domain of unknown function (DUF4860); This family consists of uncharacterized proteins around 160 residues in length and is mainly found in various Eubacterium and Clostridium species. The function of this family is unknown.


Pssm-ID: 435172  Cd Length: 98  Bit Score: 98.46  E-value: 1.07e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1198680711  45 SKLYTPIAYLTQKIHSYDSQGQVTTETIDGIQCLVL----SDDQTKTYIYQKEDFLQELYVLSTSEVDLDSGQKMMSCDS 120
Cdd:pfam16152   1 YNARTALSYITEKIRQNDREGAVSVGELDGTPALVLtetiDGEVYVTYIYYYDGALRELFVREGTSLTPEDGQEILELKD 80

                          90
                  ....*....|....*...
gi 1198680711 121 FEV-QIEENVVEMKVQDQ 137
Cdd:pfam16152  81 FSIeQVSDRLLHFTVTDE 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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