flavin reductase-like protein (plasmid) [Rhizobium sp. N4311]
NUDIX hydrolase; bifunctional NUDIX hydrolase family protein/GNAT family N-acetyltransferase( domain architecture ID 10658198)
NUDIX hydrolase catalyzes the hydrolysis of nucleoside diphosphates linked to other moieties (X); it requires a divalent cation, such as Mg2+ or Mn2+ for its activity| bifunctional GNAT family N-acetyltransferase/NUDIX hydrolase which contains an N-terminal domain which may catalyze the transfer of an acetyl group from acetyl-CoA to a substrate and a C-terminal domain which may catalyze the hydrolysis of nucleoside diphosphates linked to other moieties and require a divalent cation, such as Mg2+ or Mn2+ for its activity
List of domain hits
Name | Accession | Description | Interval | E-value | |||
RutF | COG1853 | FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; FMN reductase RutF, ... |
13-164 | 2.47e-54 | |||
FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; FMN reductase RutF, DIM6/NTAB family is part of the Pathway/BioSystem: Pyrimidine degradation : Pssm-ID: 441458 Cd Length: 160 Bit Score: 175.02 E-value: 2.47e-54
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NUDIX_Hydrolase super family | cl00447 | NUDIX hydrolase superfamily; NUDIX hydrolase is a superfamily of enzymes found in all three ... |
179-291 | 1.17e-04 | |||
NUDIX hydrolase superfamily; NUDIX hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue NUDIX motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of NUDIX hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the NUDIX hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase. The actual alignment was detected with superfamily member cd04511: Pssm-ID: 469772 [Multi-domain] Cd Length: 123 Bit Score: 41.02 E-value: 1.17e-04
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Name | Accession | Description | Interval | E-value | |||
RutF | COG1853 | FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; FMN reductase RutF, ... |
13-164 | 2.47e-54 | |||
FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; FMN reductase RutF, DIM6/NTAB family is part of the Pathway/BioSystem: Pyrimidine degradation Pssm-ID: 441458 Cd Length: 160 Bit Score: 175.02 E-value: 2.47e-54
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Flavin_Reduct | smart00903 | Flavin reductase like domain; This entry represents the FMN-binding domain found in NAD(P) ... |
21-162 | 1.32e-53 | |||
Flavin reductase like domain; This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology. Pssm-ID: 214900 Cd Length: 147 Bit Score: 172.73 E-value: 1.32e-53
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Flavin_Reduct | pfam01613 | Flavin reductase like domain; This is a flavin reductase family consisting of enzymes known to ... |
21-166 | 1.58e-46 | |||
Flavin reductase like domain; This is a flavin reductase family consisting of enzymes known to be flavin reductases as well as various oxidoreductase and monooxygenase components. VlmR is a flavin reductase that functions in a two-component enzyme system to provide isobutylamine N-hydroxylase with reduced flavin and may be involved in the synthesis of valanimycin. SnaC is a flavin reductase that provides reduced flavin for the oxidation of pristinamycin IIB to pristinamycin IIA as catalyzed by SnaA, SnaB heterodimer. This flavin reductase region characterized by enzymes of the family is present in the C-terminus of potential FMN proteins from Synechocystis sp. suggesting it is a flavin reductase domain. Pssm-ID: 460266 Cd Length: 149 Bit Score: 154.36 E-value: 1.58e-46
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hpaC | PRK15486 | 4-hydroxyphenylacetate 3-monooxygenase reductase subunit; Provisional |
17-151 | 3.83e-06 | |||
4-hydroxyphenylacetate 3-monooxygenase reductase subunit; Provisional Pssm-ID: 185383 Cd Length: 170 Bit Score: 46.57 E-value: 3.83e-06
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NUDIX_Hydrolase | cd04511 | uncharacterized NUDIX hydrolase subfamily; NUDIX hydrolase is a superfamily of enzymes found ... |
179-291 | 1.17e-04 | |||
uncharacterized NUDIX hydrolase subfamily; NUDIX hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue NUDIX motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of NUDIX hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the NUDIX hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase. Pssm-ID: 467545 [Multi-domain] Cd Length: 123 Bit Score: 41.02 E-value: 1.17e-04
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Name | Accession | Description | Interval | E-value | |||
RutF | COG1853 | FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; FMN reductase RutF, ... |
13-164 | 2.47e-54 | |||
FMN reductase RutF, DIM6/NTAB family [Energy production and conversion]; FMN reductase RutF, DIM6/NTAB family is part of the Pathway/BioSystem: Pyrimidine degradation Pssm-ID: 441458 Cd Length: 160 Bit Score: 175.02 E-value: 2.47e-54
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Flavin_Reduct | smart00903 | Flavin reductase like domain; This entry represents the FMN-binding domain found in NAD(P) ... |
21-162 | 1.32e-53 | |||
Flavin reductase like domain; This entry represents the FMN-binding domain found in NAD(P)H-flavin oxidoreductases (flavin reductases), a class of enzymes capable of producing reduced flavin for bacterial bioluminescence and other biological processes. This domain is also found in various other oxidoreductase and monooxygenase enzymes... This domain consists of a beta-barrel with Greek key topology, and is related to the ferredoxin reductase-like FAD-binding domain. The flavin reductases have a different dimerisation mode than that found in the PNP oxidase-like family, which also carries an FMN-binding domain with a similar topology. Pssm-ID: 214900 Cd Length: 147 Bit Score: 172.73 E-value: 1.32e-53
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Flavin_Reduct | pfam01613 | Flavin reductase like domain; This is a flavin reductase family consisting of enzymes known to ... |
21-166 | 1.58e-46 | |||
Flavin reductase like domain; This is a flavin reductase family consisting of enzymes known to be flavin reductases as well as various oxidoreductase and monooxygenase components. VlmR is a flavin reductase that functions in a two-component enzyme system to provide isobutylamine N-hydroxylase with reduced flavin and may be involved in the synthesis of valanimycin. SnaC is a flavin reductase that provides reduced flavin for the oxidation of pristinamycin IIB to pristinamycin IIA as catalyzed by SnaA, SnaB heterodimer. This flavin reductase region characterized by enzymes of the family is present in the C-terminus of potential FMN proteins from Synechocystis sp. suggesting it is a flavin reductase domain. Pssm-ID: 460266 Cd Length: 149 Bit Score: 154.36 E-value: 1.58e-46
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hpaC | PRK15486 | 4-hydroxyphenylacetate 3-monooxygenase reductase subunit; Provisional |
17-151 | 3.83e-06 | |||
4-hydroxyphenylacetate 3-monooxygenase reductase subunit; Provisional Pssm-ID: 185383 Cd Length: 170 Bit Score: 46.57 E-value: 3.83e-06
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NUDIX_Hydrolase | cd04511 | uncharacterized NUDIX hydrolase subfamily; NUDIX hydrolase is a superfamily of enzymes found ... |
179-291 | 1.17e-04 | |||
uncharacterized NUDIX hydrolase subfamily; NUDIX hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue NUDIX motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of NUDIX hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the NUDIX hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase. Pssm-ID: 467545 [Multi-domain] Cd Length: 123 Bit Score: 41.02 E-value: 1.17e-04
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Blast search parameters | ||||
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