|
Name |
Accession |
Description |
Interval |
E-value |
| flgG |
PRK12693 |
flagellar basal body rod protein FlgG; Provisional |
1-260 |
1.54e-162 |
|
flagellar basal body rod protein FlgG; Provisional
Pssm-ID: 183687 [Multi-domain] Cd Length: 261 Bit Score: 450.47 E-value: 1.54e-162
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERL 80
Cdd:PRK12693 1 MIRALWIAKTGLDAQQTNIDVISNNLANVNTTGFKKSRAVFEDLLYQTIRQPGAQSSQNTTLPSGLQVGTGVRPVATQKI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 81 HSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT 160
Cdd:PRK12693 81 FTQGNLQQTGNSLDVAIEGQGFFQVQLPDGTIAYTRDGSFKLDQDGQLVTSGGYPLQPEITIPENATSITIGTDGTVSVT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 161 QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAY 240
Cdd:PRK12693 161 QAGQAAPQVVGQITLTDFINPAGLESIGENLYLETAASGAPIEGTPGLNGLGTLRQGFLETSNVNVVEELVNMITGQRAY 240
|
250 260
....*....|....*....|
gi 78100014 241 EINSKAVSTTDQMLQKLTQL 260
Cdd:PRK12693 241 EMNSKAISTADQMLQYVNQL 260
|
|
| FlgG |
COG4786 |
Flagellar basal body rod protein FlgG [Cell motility]; |
5-260 |
4.50e-136 |
|
Flagellar basal body rod protein FlgG [Cell motility];
Pssm-ID: 443816 [Multi-domain] Cd Length: 260 Bit Score: 383.78 E-value: 4.50e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 5 LWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQG 84
Cdd:COG4786 1 LYTAASGMLAQQTRLDVISNNLANVNTTGFKRDRAVFEDLLYQLIRRPGAPSSQGTQTPVGLQLGTGVRVAATQTDFTQG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 85 NLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQP---AITIPANALSITIGRDGVVSVTQ 161
Cdd:COG4786 81 SLQQTGNPLDLAIEGDGFFQVQTPDGETAYTRDGSFQLDADGQLVTSDGYPVLPengPITIPEDATSITISEDGTVSVTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 162 QgQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYE 241
Cdd:COG4786 161 A-DGDGQQVGQLGLVDFANPAGLEKVGDNLFRETAASGAPIVGTPGEDGLGTLRQGYLEGSNVDVVEEMVDMIEAQRAYE 239
|
250
....*....|....*....
gi 78100014 242 INSKAVSTTDQMLQKLTQL 260
Cdd:COG4786 240 ANSKVIQTADEMLGKANNL 258
|
|
| flgG_G_neg |
TIGR02488 |
flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the ... |
4-260 |
7.92e-134 |
|
flagellar basal-body rod protein FlgG, Gram-negative bacteria; This family consists of the FlgG protein of the flagellar apparatus in the Proteobacteria and spirochetes. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 131541 [Multi-domain] Cd Length: 259 Bit Score: 377.85 E-value: 7.92e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 4 SLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTT-LPSGLQIGTGVRPVATERLHS 82
Cdd:TIGR02488 1 ALWTAATGMNAQQTNMDVISNNLANVNTTGFKKDRAEFEDLLYQTERQPGAQSSEQQTiLPVGVQVGLGVRVVATQKLFT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 83 QGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQ 162
Cdd:TIGR02488 81 QGSLQNTGNDLDLAIEGEGFFQVLMPDGTTAYTRDGAFKINAEGQLVTSNGYPLQPEITIPENATSITVGSDGEVSVRQG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 163 GQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEI 242
Cdd:TIGR02488 161 GQTEPQEVGQITLATFINPAGLEAVGENLFRETPASGPPQIGTPGLDGFGKLRQGFLEASNVNVVQEMVDMITAQRAYEM 240
|
250
....*....|....*...
gi 78100014 243 NSKAVSTTDQMLQKLTQL 260
Cdd:TIGR02488 241 NSKAIQASDQMLQTVSQL 258
|
|
| flgG |
PRK12816 |
flagellar basal body rod protein FlgG; Reviewed |
1-254 |
1.57e-105 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183766 [Multi-domain] Cd Length: 264 Bit Score: 306.35 E-value: 1.57e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERL 80
Cdd:PRK12816 1 MMRSLWTAASGMNAQQFNIDTIANNLANVNTTGFKKIRAEFEDLIYQTQRRAGTPATEDTVTPLGVQVGHGVKVAATQRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 81 HSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANAL--SITIGRDGVVS 158
Cdd:PRK12816 81 FEQGSLQATGNKLDVAIEGEGFFKILMPDGTYAYTRDGSFKIDANGQLVTSNGYRLLPEIIFPENYIlnSITISEEGIVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 159 VTQQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQR 238
Cdd:PRK12816 161 VKVGEDNDPIELGQIELYRFVNPAGLSAIGKNLFKETIASGQEIPGIPGSEGFGRVLQGFLEMSNVSIVEEMVTMIVAQR 240
|
250
....*....|....*.
gi 78100014 239 AYEINSKAVSTTDQML 254
Cdd:PRK12816 241 AYEINSKAIQTSDNML 256
|
|
| FlgEFG_subfam |
TIGR03506 |
flagellar hook-basal body protein; This model encompasses three closely related flagellar ... |
3-243 |
2.59e-87 |
|
flagellar hook-basal body protein; This model encompasses three closely related flagellar proteins usually denoted FlgE, FlgF and FlgG. The names have often been mis-assigned, however. Three equivalog models, TIGR02489, TIGR02490 and TIGR02488, respectively, separate the individual forms into three genome-context consistent groups. The major differences between these genes are architectural, with variable central sections between relatively conserved N- and C-terminal domains. More distantly related are two other flagellar apparatus familis, FlgC (TIGR01395) which consists of little else but the N-and C-terminal domains and FlgK (TIGR02492) with a substantial but different central domain.
Pssm-ID: 274616 [Multi-domain] Cd Length: 231 Bit Score: 259.11 E-value: 2.59e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 3 SSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGaqsseqttlpsglQIGTGVRPVATERLHS 82
Cdd:TIGR03506 1 MALYTALSGLNAQSSALDVIANNIANANTTGFKRSRAEFQDLLSQSVSGSG-------------QVGGGVRTSGVATDFS 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 83 QGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPA----ITIPANALSITIGRDGVVS 158
Cdd:TIGR03506 68 QGSLQSTGNSLDLAISGDGFFVVQTPDGSEAYTRAGSFKLDADGYLVTSDGYPLLDWgggpITLPPDAGSVSIGEDGTVS 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 159 VTQQGqAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQR 238
Cdd:TIGR03506 148 ATYSN-GQTVELGQIALANFPNPDGLRKEGGNLYSATPGSGAALVGAPGTGGFGTLVSGALEGSNVDLAEELVNMISAQR 226
|
....*
gi 78100014 239 AYEIN 243
Cdd:TIGR03506 227 AYQAN 231
|
|
| flgG |
PRK12692 |
flagellar basal body rod protein FlgG; Reviewed |
4-259 |
4.97e-87 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 139158 [Multi-domain] Cd Length: 262 Bit Score: 259.39 E-value: 4.97e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 4 SLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPG-AQSSEQTTLPSGLQIGTGVRPVATERLHS 82
Cdd:PRK12692 3 ALAIAATGMSAQQLNLEVIANNIANLNTTGFKGARAEFTDLLYQAERQQGvPNQAGQEAVPEGAMLGLGVRAAAIRNLHR 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 83 QGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVTQQ 162
Cdd:PRK12692 83 QGSLAQTGNQLDLAVNGRGYFQVTSPNGEIQYTRAGSFNKNAAGQLVTMEGYAVDPAILIPQNTTQVTINESGQVFAKID 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 163 GQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEI 242
Cdd:PRK12692 163 GQVAPQNLGQLTLANFANESGLEPLGNGLYRETPASGAPVVGNPGDVGFGKIQQGYLEGSNVDPVKEITSLITAQRAFEM 242
|
250
....*....|....*..
gi 78100014 243 NSKAVSTTDQMLQKLTQ 259
Cdd:PRK12692 243 NSKVIQAADEMAGTVSK 259
|
|
| flgG |
PRK12636 |
flagellar basal body rod protein FlgG; Provisional |
1-260 |
6.35e-68 |
|
flagellar basal body rod protein FlgG; Provisional
Pssm-ID: 183640 [Multi-domain] Cd Length: 263 Bit Score: 210.77 E-value: 6.35e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGlQIGTGVRPVATERL 80
Cdd:PRK12636 1 MLRSMYSGISGMKNFQTKLDVIGNNIANVNTYGFKKSRVTFKDMVSQTISGASGPTANRGGVNSK-QVGLGSQLGAIDTI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 81 HSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSsAYTRDGSFQVDQNGQLVTAGGFQVQPA----ITIPANALSITIGRDGV 156
Cdd:PRK12636 80 HTQGSLQTTGRPLDLAISGDGFFRVGDGDNT-AYTRAGNFYLDNEGNIVNADGLYLLGMnggrIQIPTDAQSFSIGADGT 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 157 VSVTQQGQAAPVqVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQV 236
Cdd:PRK12636 159 VSYVDAGGELQT-AGQIGLATFANPDGLEKAGDNLYRETLNSGTPSAVVPGEGGTGKIVSGALEMSNVDLAEEFTEMIVA 237
|
250 260
....*....|....*....|....
gi 78100014 237 QRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:PRK12636 238 QRGFQANTRIITTSDEILQELVNL 261
|
|
| flgG |
PRK12817 |
flagellar basal body rod protein FlgG; Reviewed |
1-253 |
1.03e-62 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183767 [Multi-domain] Cd Length: 260 Bit Score: 197.61 E-value: 1.03e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLpsglQIGTGVRPVATERL 80
Cdd:PRK12817 1 MLRAFWNSKSGMNAQQEKLDSISNNLANVNTTGYKREDVSFSDLVYETLDRKGYPTNDKPEI----ITGTGVKATNWIRD 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 81 HSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGG------FQVQPAI---TIPANALSITI 151
Cdd:PRK12817 77 NQQGNLLTTGNKTDLAIDGEGFFRVIMADGTYAYTRAGNFNIDSNGMLVDDNGnrleiqLEAGVGInnrNTGFDSNNFTV 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 152 GRDGVVSVTQQGQaAPVQVGQLNLTTFMNDTGLESIGENLYTETQSsgapneSTPGLNGAGLLYQGYVETSNVNVAEELV 231
Cdd:PRK12817 157 DEDGGISVKNVDG-QNKKVGKINIYNAVGNDAFISIGDNLYVPSDG------VQVFLNNDVDILQGYLENSNVDLGKEMT 229
|
250 260
....*....|....*....|..
gi 78100014 232 NMIQVQRAYEINSKAVSTTDQM 253
Cdd:PRK12817 230 DMIITQRAFQLSSKGIKTADEM 251
|
|
| FlgE |
COG1749 |
Flagellar hook protein FlgE [Cell motility]; |
1-260 |
4.08e-59 |
|
Flagellar hook protein FlgE [Cell motility];
Pssm-ID: 441355 [Multi-domain] Cd Length: 414 Bit Score: 192.69 E-value: 4.08e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQsseqttlpsglQIGTGVRPVATERL 80
Cdd:COG1749 1 MMMSFNTGVSGLNAASTALDVIGNNIANSNTVGFKSSRAEFADLVAQSLSGANPT-----------QVGGGVRVASVAQI 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 81 HSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQ----------------------- 137
Cdd:COG1749 70 FTQGSLQSTGNALDLAISGNGFFVVSDSGGQTYYTRAGSFSLDKDGYLVNSSGLYLQgypadadgtipdtggglepiqip 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 --------------------------------------------------------------------------------
Cdd:COG1749 150 tgqlpakattkvtlggnlpadatvptapfdptdpttynfstsvtvydslgnshtltlyftktgantwtvyvtvdgadvtg 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 138 --------------------------PAITIP---ANALSITI---------GRDGVVSVTQQGQAA------------- 166
Cdd:COG1749 230 gtgatgtgtltfdsngkltsptsggpGTLTLTvngAAPQTITLdlsgltqyaSSFSVTSLTQDGYAAgtltgvsidddgv 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 167 ---------PVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQ 237
Cdd:COG1749 310 vtatysngqTRPLGQIALATFANPQGLQKLGGNLWAETANSGEPLLGTAGTGGLGSIQSGALESSNVDLAEELVNMIVAQ 389
|
410 420
....*....|....*....|...
gi 78100014 238 RAYEINSKAVSTTDQMLQKLTQL 260
Cdd:COG1749 390 RAYQANAKVITTSDEMLQTLVNL 412
|
|
| FlgF |
COG4787 |
Flagellar basal body rod protein FlgF [Cell motility]; |
5-260 |
3.52e-52 |
|
Flagellar basal body rod protein FlgF [Cell motility];
Pssm-ID: 443817 [Multi-domain] Cd Length: 246 Bit Score: 169.93 E-value: 3.52e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 5 LWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQ----RAVFedllyqtIRQPG----AQSSEQTTlpsglqigtGVRpva 76
Cdd:COG4787 5 IYTAMSGAKQTLEAQAVTANNLANASTTGFRADleaaRAVP-------VQGEGlptrAFAVTETP---------GTD--- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 77 terlHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQV----QPaITIPANAlSITIG 152
Cdd:COG4787 66 ----FSPGPLQQTGRPLDVAIQGDGWLAVQAPDGSEAYTRAGDLQVDANGQLVTGNGLPVlgdgGP-ITIPPGA-KVTIG 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 153 RDGVVSVTQQGQ--AAPVQVGQLNLTT------FMNDTGLesigenLYTetqSSGAPNESTPGLNgaglLYQGYVETSNV 224
Cdd:COG4787 140 ADGTISIVPAGGppNALAEVGRLKLVNpdpaqlVKGDDGL------FRL---KDGGPLPADPNVR----VVSGALEGSNV 206
|
250 260 270
....*....|....*....|....*....|....*.
gi 78100014 225 NVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:COG4787 207 NAVEEMVSMISLARQFEMQMKMMKTADENDQAANQL 242
|
|
| flgE |
PRK05682 |
flagellar hook protein FlgE; Validated |
4-260 |
1.60e-47 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235557 [Multi-domain] Cd Length: 407 Bit Score: 162.31 E-value: 1.60e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 4 SLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQpgaqsseqttlpSGLQIGTGVRPVATERLHSQ 83
Cdd:PRK05682 2 SFNTAVSGLNAASNRLDVIGNNIANANTTGFKSSRAEFADLYANSAGT------------NPTQVGSGVKVAGVAQQFSQ 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 84 GNLSQTNNSKDVAIKGQGFFqVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQ-------------------------- 137
Cdd:PRK05682 70 GSITSTGNSLDLAISGNGFF-VVSNGGNGFYTRAGAFKLDKNGYLVNAAGYYLQgypadadggtpptvgaglvplniptt 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 --------------------------------------------------------------------------------
Cdd:PRK05682 149 alapkattsgtfqgnlpstaafdptdpdtynhstsltvydslgnshtldvyfvktgdntwevyvyddgkpvsttatgtgt 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 138 ------------------------PAITIPANALSITI---------GRDGVVSVTQQGQAA------------------ 166
Cdd:PRK05682 229 ttltfdsngalttttspttfnitgGATNGADGGQTITLdlsgstqyaSGFTVSATTQDGYAPgtltgysidddgtvtavy 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 167 ----PVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEI 242
Cdd:PRK05682 309 sngqTKPLGQIALANFANPDGLTKVGGNVWSATAASGVALIGTAGSGGFGTIQSGALESSNVDLSTELVNMIVAQRNYQA 388
|
410
....*....|....*...
gi 78100014 243 NSKAVSTTDQMLQKLTQL 260
Cdd:PRK05682 389 NAKTIKTQDQLLQTLVNL 406
|
|
| flgF |
PRK12689 |
flagellar basal-body rod protein FlgF; |
11-260 |
1.16e-45 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 183684 [Multi-domain] Cd Length: 253 Bit Score: 153.36 E-value: 1.16e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 11 GLDAQQT---NMDVIANNLANVSTNGFKRQRAVFEDLLyqtirQPGAqsSEQTTLPSGLQIgTGVRPVATERLHSQGNLS 87
Cdd:PRK12689 8 GLSRQMAlerQLDVVANNVANVNTNGFKARSSLFQEYL-----MPGA--HEDNFQRPDRRV-SYVQDRGTPLDLSQGPLE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 88 QTNNSKDVAIKGQGFFQVMLPDGSSaYTRDGSFQVDQNGQLVTAGGFQVQPA---ITIPANALSITIGRDGVVSVTQQGQ 164
Cdd:PRK12689 80 QTKNPLDVAIDGDAFLAVQTPQGER-YTRDGALEINAQGQLVTSDGYPVLGTggpITFQPTDTGIAISPDGTVSVNEGTA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 165 AAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNEStpglngaGLLYQGYVETSNVNVAEELVNMIQVQRAYEins 244
Cdd:PRK12689 159 TTDSIRGKLRLVTFANPQALKKEGANLYAATAPARPADTK-------ARVEQGYIERSNVNPVLEMTRMMEVNRTYT--- 228
|
250
....*....|....*.
gi 78100014 245 kAVSTtdqMLQKLTQL 260
Cdd:PRK12689 229 -QVSS---MLQQQSDL 240
|
|
| flgF |
PRK12640 |
flagellar basal body rod protein FlgF; Reviewed |
8-260 |
1.13e-43 |
|
flagellar basal body rod protein FlgF; Reviewed
Pssm-ID: 183642 [Multi-domain] Cd Length: 246 Bit Score: 148.08 E-value: 1.13e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 8 AKTGLDAQQtnmdVIANNLANVSTNGFKRQravfedlLYQTIRQPgAQSSEQTTLPSGLQIGTGVRpvaterlHSQGNLS 87
Cdd:PRK12640 12 ASQNLNQQA----VVANNLANASTPGFRAD-------LAQARAVP-VFGEGLPTRVFALASTPGAD-------FSPGPLQ 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 88 QTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQV---QPAITIPANAlSITIGRDGVVSVTQQGQ 164
Cdd:PRK12640 73 TTGRPLDVALQGDGWLAVQAPDGSEAYTRNGSLQVDANGQLRTANGLPVlgdGGPIAVPPGA-KITIGADGTISALPPGD 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 165 A--APVQVGQLNLTT------FMNDTGLESigenlytetQSSGAPNESTPGLNgaglLYQGYVETSNVNVAEELVNMIQV 236
Cdd:PRK12640 152 PpnAVAEVGRLKLVNppaaqlTRGDDGLFR---------TTDGAPAPADPTVR----VMSGALEGSNVNAVEEMVSMIAL 218
|
250 260
....*....|....*....|....
gi 78100014 237 QRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:PRK12640 219 ARQFEMQVKMMKTADENAQAANQL 242
|
|
| flgG |
PRK12818 |
flagellar basal body rod protein FlgG; Reviewed |
1-257 |
1.15e-40 |
|
flagellar basal body rod protein FlgG; Reviewed
Pssm-ID: 183768 [Multi-domain] Cd Length: 256 Bit Score: 140.60 E-value: 1.15e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAV---FEDLLYQTiRQPGAQSSEQTTLPSGLQIGTGVRPVAT 77
Cdd:PRK12818 1 MIRGLYTAVSGMITLEAKQDVITNNLANVNTVGYKSDNLAfksFEDVLIEN-YDKKVGNKNVKNIIGGLSMGSKIDEVNT 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 78 erLHSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQpAITIPANALS-ITIGrDGV 156
Cdd:PRK12818 80 --LFTQGIIKSTDKPTDFAIQGRGFFTVERNAGNNYYTRDGHFHVDTQGYLVNDSGYYVL-GRNNATGAREpINVG-NGK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 157 VSVTQQG--QAAPVQVGQLNLTTFMNDTGLESIGENLYTETQssgapnestPGLNGAGLLYQGYVETSNVNVAEELVNMI 234
Cdd:PRK12818 156 FSTDADGniSLDGNASYKFNVADFNDYNSLKKIGDNLYTGNN---------PQNINGAIVRQNSLEKSNVNVTNEMVNMM 226
|
250 260
....*....|....*....|...
gi 78100014 235 QVQRAYEINSKAVSTTDQMLQKL 257
Cdd:PRK12818 227 TTMRSFETNQKIVQSIDETLGKA 249
|
|
| flgF |
PRK12690 |
flagellar hook-basal body complex protein; |
19-252 |
4.70e-39 |
|
flagellar hook-basal body complex protein;
Pssm-ID: 183685 [Multi-domain] Cd Length: 238 Bit Score: 135.97 E-value: 4.70e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 19 MDVIANNLANVSTNGFKRQRAVFEDLLYQTirqPGAQSSEQTTLPSGLQIGtgvrpvaterlHSQGNLSQTNNSKDVAIK 98
Cdd:PRK12690 19 MQVVANNIANASTTGFRREGLVFSEYVKSL---DSGEASLSMARASGRQTD-----------LEQGGLTQTGGQFDFAIE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 99 GQGFFQVMLPDGSSaYTRDGSFQVDQNGQLVTAGGFQV----QPAITIPANALSITIGRDGVVSVTQQgqaapvQVGQLN 174
Cdd:PRK12690 85 GEGFFMVETPQGER-LTRAGSFTPNAEGELVDPDGNRLldagGAPIFIPPDARSVAVGADGTLSADGQ------PLGQIG 157
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 78100014 175 LTTFMNDTGLESIGENLYtetqssgAPNESTPGLNGAGLLyQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQ 252
Cdd:PRK12690 158 LYQPTDPLGLRREGGTRF-------RAEGGVEPAEGARLL-QGFLEGSNVNPVSEIARMIEVQRAYELGQSFLDREDE 227
|
|
| flgF |
PRK12642 |
flagellar basal-body rod protein FlgF; |
1-256 |
2.72e-33 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 237153 [Multi-domain] Cd Length: 241 Bit Score: 120.92 E-value: 2.72e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGlqigtgvrpvaterl 80
Cdd:PRK12642 1 MQSGLYVALSSQMALEKRLDTIADNVANVNTVGFRATEVKFDTVVSDTASKKVAFVSQGKSYLST--------------- 65
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 81 hSQGNLSQTNNSKDVAIKGQGFFQVMLPDGSsAYTRDGSFQVDQNGQLVTAGGFQVQPA----ITIPANALSITIGRDGv 156
Cdd:PRK12642 66 -EAGPLTKTGNPLDFAVKGDAWFSFDTPAGQ-VYTRDGRFTMTSTGELVSVTGYPVLDAggapIQLNPGGGEPTIGADG- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 157 vSVTQQGQaapvQVGQLNLTTFMNDTGLESIGENLYTETqssgAPNESTPGLNGAGLLyQGYVETSNVNVAEELVNMIQV 236
Cdd:PRK12642 143 -AIYQNGV----QVGAIGLFEIDADAGLLRYGNSGVIPD----KPPQPVVDRNSVGVV-QGYLEGSNVNAMTEMTQLISV 212
|
250 260
....*....|....*....|
gi 78100014 237 QRAYEINSKAVSTTDQMLQK 256
Cdd:PRK12642 213 SRAFESVSSLMRQSESSVSE 232
|
|
| flgE |
PRK08425 |
flagellar hook protein FlgE; Validated |
1-137 |
1.36e-29 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 236263 [Multi-domain] Cd Length: 731 Bit Score: 116.72 E-value: 1.36e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRqpgaqsseQTTLPSG-------LQIGTGVR 73
Cdd:PRK08425 1 MMRSLWSGVSGLQAHQIAMDVEGNNIANVNTTGFKYSRASFVDMLSQTKL--------IATAPKGglggqndMQIGLGVG 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 78100014 74 PVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMlPDG--SSAYTRDGSFQVDQNGQLVTAGGFQVQ 137
Cdd:PRK08425 73 VSSTTKIFSQGSIQNTDKNTDLAIQGDGFFIVS-PDGgtTRNYTRDGDFKFDAQGNFVNNGGYVVQ 137
|
|
| flgE_epsilon |
TIGR02489 |
flagellar hook protein FlgE, epsilon proteobacterial; Members of this family are flagellar ... |
1-154 |
9.90e-27 |
|
flagellar hook protein FlgE, epsilon proteobacterial; Members of this family are flagellar hook proteins, designated FlgE, as found in the epsilon subdivision of the Proteobacteria (Helicobacter, Wolinella, and Campylobacter). These proteins differ significantly in architecture from proteins designated FlgE in other lineages; the N-terminal and C-terminal domains are homologous, but members of this family only contain a large central domain that is surface-exposed and variable between strains.
Pssm-ID: 131542 [Multi-domain] Cd Length: 719 Bit Score: 108.50 E-value: 9.90e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRqpgaqsseQTTLPSG-------LQIGTGVR 73
Cdd:TIGR02489 1 MLRSLWSGVSGMQAHQVALDVEGNNIANVNTTGFKYSRADFGDMLSQTVK--------IATSPYDglggqndLSIGLGVS 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 74 PVATERLHSQGNLSQTNNSKDVAIKGQGFFQVMlPDG--SSAYTRDGSFQVDQNGQLVTAGGFQVQpAITIPANALSITI 151
Cdd:TIGR02489 73 ISSTTKIFSQGSVQTTNSKTDVAINGDGFFIVS-DDGglTNYYTRDGAFKFDAYGNFVNNSGYIVQ-GWNRPLEAAESGT 150
|
...
gi 78100014 152 GRD 154
Cdd:TIGR02489 151 MSD 153
|
|
| Flg_bbr_C |
pfam06429 |
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of ... |
182-260 |
1.39e-23 |
|
Flagellar basal body rod FlgEFG protein C-terminal; This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which pfam00460 is often present at the extreme N terminus.
Pssm-ID: 428939 [Multi-domain] Cd Length: 74 Bit Score: 90.79 E-value: 1.39e-23
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 78100014 182 TGLESIGENLYTETQssGAPNESTpglNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:pfam06429 1 AGLEKGGDNLFRETD--GAPILGA---GADGRVQQGYLEGSNVNPVEEMVNMIEAQRAYEANSKVIQTADEMLQTANQL 74
|
|
| flgF |
TIGR02490 |
flagellar basal-body rod protein FlgF; Members of this protein are FlgF, one of several ... |
140-241 |
1.51e-19 |
|
flagellar basal-body rod protein FlgF; Members of this protein are FlgF, one of several homologous flagellar basal-body rod proteins in bacteria. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274160 [Multi-domain] Cd Length: 89 Bit Score: 80.37 E-value: 1.51e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 140 ITIPANAlSITIGRDGVVSVtqqgqaAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLngagllYQGYV 219
Cdd:TIGR02490 1 IVLPPDG-DITIGADGTISQ------DGEEVGRLGLVNFDNPNQLQREGDGLFRATGGGPAPADSNVRV------VQGYL 67
|
90 100
....*....|....*....|..
gi 78100014 220 ETSNVNVAEELVNMIQVQRAYE 241
Cdd:TIGR02490 68 EGSNVNAVSEMVDMIEAQRAYE 89
|
|
| flgE |
PRK08425 |
flagellar hook protein FlgE; Validated |
170-260 |
1.71e-17 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 236263 [Multi-domain] Cd Length: 731 Bit Score: 81.67 E-value: 1.71e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 170 VGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVST 249
Cdd:PRK08425 639 LAQVALANFANNAGLQAEGGNVFSQTANSGQAVIGAAGTGGRGSISGSKLEMSNVDLSRSLTQLIVIQRGFQANSKTITT 718
|
90
....*....|.
gi 78100014 250 TDQMLQKLTQL 260
Cdd:PRK08425 719 SDQMLNTLLQL 729
|
|
| flgE |
PRK06803 |
flagellar basal body protein FlaE; |
4-259 |
2.79e-17 |
|
flagellar basal body protein FlaE;
Pssm-ID: 235862 [Multi-domain] Cd Length: 402 Bit Score: 80.59 E-value: 2.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 4 SLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTirQPGaqsseqttlpsglqiGTGVRPVaTERLHSQ 83
Cdd:PRK06803 2 SFNIALSGLNATTQQLNTISNNIANSSTKGFKGSRTEFSSIYNGG--QPG---------------GVEVSSV-SQNFSKD 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 84 GNLSQTNNSKDVAIKGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGG---------------------FQVQPA--- 139
Cdd:PRK06803 64 GSLTYTGRGLDLAISGGGFFVLKESDGDTAYTRAGMFRSDVDGYLTDPQGmklqgypvdaagnlqtgnvsdLQVQTAslp 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 --------------------------------------------------------------------------------
Cdd:PRK06803 144 akatdqldfvanldasvtpidpsvspfdptdeksynssttstvydslgnehavtqyfvktatnewavhytvdggdvtppl 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 140 -----------------ITIP---------ANALSITIGRDGV--------VSVTQQ-----GQAAPVQV---------- 170
Cdd:PRK06803 224 ghtlqfddtgalipgkgSTINlhgtfnpagASDYDIDIDYTGStqyaadfnNSRNKSngytsGELNGVRIedngmvyaty 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 171 --------GQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEI 242
Cdd:PRK06803 304 tngqrqlqGQVVLANFANPNGLVTVSNTAWSASNKSGAPILGTPGTGTLGSLTSGALEGSNVDITAELVGLMTAQRNYQA 383
|
410
....*....|....*..
gi 78100014 243 NSKAVSTTDQMLQKLTQ 259
Cdd:PRK06803 384 NAKVISTNDTMQQALFN 400
|
|
| flgF |
PRK12641 |
flagellar basal-body rod protein FlgF; |
18-260 |
1.21e-16 |
|
flagellar basal-body rod protein FlgF;
Pssm-ID: 105809 [Multi-domain] Cd Length: 252 Bit Score: 76.91 E-value: 1.21e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 18 NMDVIANNLANVSTNGFKRQRAVFedllyqtIRQPGAQSseqttlpsglQIGTGVRPVATERLHSQGNLSQTNNSKDVAI 97
Cdd:PRK12641 18 KQAIIANNLANISTTGFKEKFILA-------IQNHNVKN----------LYNSDKKITKEYYNLSPGTLRYTGRNLDLFI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 98 KGQGFFQVMLPDGSSAYTRDGSFQVDQNGQLvTAGGFQV---QPAITIPANaLSITIGRDGVVSVTQQGQAAPVQ--VGQ 172
Cdd:PRK12641 81 KDNGWLTIKDTNGQEAYTKNGHLKINSKRKL-TVQNNEVignNGNIIIPKN-INLKISSNGVITSIKNNHKHIVEtkIGS 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 173 LNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQ-GYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTD 251
Cdd:PRK12641 159 LKLVQLPSQDLIQKENGLFYLKKNNEINKKHTKNIKHSSKIRVQsGMLEESNVNASKNMIEMISNARQFEMQMKIISMCD 238
|
....*....
gi 78100014 252 QMLQKLTQL 260
Cdd:PRK12641 239 QNTEYANQL 247
|
|
| flgF |
PRK12643 |
flagellar basal body rod protein FlgF; Reviewed |
21-224 |
6.51e-14 |
|
flagellar basal body rod protein FlgF; Reviewed
Pssm-ID: 139117 [Multi-domain] Cd Length: 209 Bit Score: 68.72 E-value: 6.51e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 21 VIANNLANVSTNGFKRQRAVFEDLlyqTIRQPG-AQSSEQTTLPSGLQIgtgvrpvaterlhSQGNLSQTNNSKDVAIKG 99
Cdd:PRK12643 21 VTANNLANASTPGFRAQLAAMRAV---PIDGPSlATRTMVTTSTPGVDI-------------SQGTMNFSGRPLDVALQQ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 100 QGFFQVMLPDGSSAYTRDGSFQVDQNGQLvTAGGFQV---QPAITIPANAlSITIGRDGVVSVTQQGQaAPVQVGQLNLT 176
Cdd:PRK12643 85 DGYLAVQLPDGSEAYTRNGNIQISANGQM-TVQGYPLmgdNGPIDVPPQA-AVTIAADGTISALNAGD-SPNTIAQLGQI 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 78100014 177 TFMNDTGLESI-GEN----LYTETQSS-GAPNESTPglngagLLYQGYVETSNV 224
Cdd:PRK12643 162 KRVQATAGEMMhGDDglfhLTPETQQArGAQLPNDP------LVKPGEREHQWL 209
|
|
| flgG |
PRK12819 |
flagellar basal-body rod protein FlgG; |
5-256 |
4.13e-13 |
|
flagellar basal-body rod protein FlgG;
Pssm-ID: 183769 [Multi-domain] Cd Length: 257 Bit Score: 67.21 E-value: 4.13e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 5 LWIAKTGLDAQQTNMDVIANNLANVSTNGFKrqravFEDLLYQTIrqpGAQSSEQTTLPSGLQIGT---GVRPVATERLH 81
Cdd:PRK12819 4 LYIGSMGMMNYMQRINVHSNNVANAQTTGFK-----AENMTSKVF---DVQDTYRRGDGAVTNIGSvdyAVVPAATHVNL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 82 SQGNLSQTNNSKDV-----AIKGQGFFqVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQV----QPAITIPANAlSITIG 152
Cdd:PRK12819 76 VQGNIQMTNSDTDFflddgPAGTSSFF-VTSKNGETFLTRDGSFTLNSDRYLQTASGAFVmgenNERIRIPEGA-KVAVQ 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 153 RDGVV--SVTQQgqaapvQVGQLNlTTFMNDTGLESIGENLYTETQSSGAPNESTPglNGAGLLYQGYVETSNVNVAEEL 230
Cdd:PRK12819 154 ADGTLydAVTQN------NIARLQ-TKTVSAEQNDRLVQRENKSFTLAEGNIANLP--NGQGIVKNGMLENSNVDMTKEM 224
|
250 260
....*....|....*....|....*.
gi 78100014 231 VNMIQVQRAYEINSKAVSTTDQMLQK 256
Cdd:PRK12819 225 ADLMTDQRMIQASQRVMTSFDKIYEK 250
|
|
| flgE |
PRK05841 |
flagellar hook protein FlgE; Validated |
149-260 |
4.49e-13 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235620 [Multi-domain] Cd Length: 603 Bit Score: 68.33 E-value: 4.49e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 149 ITIGRDGVVSVT-QQGQAAPVqvGQLNLTTFMNDTGLESIGENLY--TETQSSGAPNESTP----GLNGAGLLYQG---- 217
Cdd:PRK05841 480 VRIDENGVISLAfSNGVVEPM--GRIGIAAFTNDQGLRKVGGNLFemQEGTINGENRPLSGnpilGWDEEGKLKFGkvrh 557
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 78100014 218 -YVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:PRK05841 558 kYLETSNVDAGNALTNLILMQRGYSMNARAFGTGDDLIKEAISL 601
|
|
| flgE |
PRK12637 |
flagellar hook protein FlgE; Provisional |
108-260 |
5.38e-13 |
|
flagellar hook protein FlgE; Provisional
Pssm-ID: 183641 [Multi-domain] Cd Length: 473 Bit Score: 68.24 E-value: 5.38e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 108 PDGSSAYTRDGSFQVDQNGqlVTAGGFQVQPAIT----IPANALSITIGRDGVVsVTQQGQAAPVQVGQLNLTTFMNDTG 183
Cdd:PRK12637 319 PGGNAAPADPLAITVSYNG--VTQYGSDFAPKVVqngySSGEFMGLSVGKDGSL-VAKYTNGETQTIGTLVLANFNNVQG 395
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 78100014 184 LESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:PRK12637 396 LQPVGNNAWVETSESGQATLGQPGTNGLATIAGQALEASNVDMSRELVNMIVAQRTYQANAQTIKTQDEVMQVLMNM 472
|
|
| flgE |
PRK12637 |
flagellar hook protein FlgE; Provisional |
8-180 |
1.19e-12 |
|
flagellar hook protein FlgE; Provisional
Pssm-ID: 183641 [Multi-domain] Cd Length: 473 Bit Score: 67.09 E-value: 1.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 8 AKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTirqpgaqsseqttlpsglQIGTGVRPVATERLHSQGNLS 87
Cdd:PRK12637 6 GLSGLNAASQNLDVIGNNIANSGTVGFKSGAASFADVYASS------------------RVGLGVKVSAINQRFTVGNIS 67
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 88 QTNNSKDVAIK-GQGFFQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQpaiTIPANAlsitIGRDGVVSVTQQGQAA 166
Cdd:PRK12637 68 TTGGEYDMAIDgGKGFFRLTDQSGGVFYSRNGEFMVDKNFYIVNAQGFRLT---GYPAGG----VGAQPVDLQLPQGNIA 140
|
170
....*....|....
gi 78100014 167 PVQVGQLNLTTFMN 180
Cdd:PRK12637 141 PQATSTAGLQTNLN 154
|
|
| FlgC |
COG1558 |
Flagellar basal body rod protein FlgC [Cell motility]; |
216-256 |
2.64e-11 |
|
Flagellar basal body rod protein FlgC [Cell motility];
Pssm-ID: 441166 [Multi-domain] Cd Length: 135 Bit Score: 59.74 E-value: 2.64e-11
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 78100014 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQK 256
Cdd:COG1558 89 DGYVRYPNVNVVEEMVDMISASRSYEANVEVINTAKSMLLK 129
|
|
| flgC |
PRK05681 |
flagellar basal body rod protein FlgC; Reviewed |
216-256 |
2.08e-10 |
|
flagellar basal body rod protein FlgC; Reviewed
Pssm-ID: 235556 [Multi-domain] Cd Length: 135 Bit Score: 57.14 E-value: 2.08e-10
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 78100014 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQK 256
Cdd:PRK05681 88 KGYVKYPNVNVVVEMVDMISASRSYEANVEVLNAAKSMMQK 128
|
|
| FlgC |
TIGR01395 |
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components ... |
217-260 |
2.80e-10 |
|
flagellar basal-body rod protein FlgC; This model represents FlgC, one of several components of bacterial flagella that share a domain described by pfam00460. FlgC is part of the basal body. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 130462 [Multi-domain] Cd Length: 135 Bit Score: 56.98 E-value: 2.80e-10
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 78100014 217 GYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:TIGR01395 90 GYVKMPNVNVVEEMVDMIEASRSYEANVQVFNTAKSMFLRTLEI 133
|
|
| flgK_ends |
TIGR02492 |
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of ... |
3-91 |
2.28e-09 |
|
flagellar hook-associated protein FlgK; The flagellar hook-associated protein FlgK of bacterial flagella has conserved N- and C-terminal domains. The central region is highly variable in length and sequence, and often contains substantial runs of low-complexity sequence. This model is built from an alignment of FlgK sequences with the central region excised. Note that several other proteins of the flagellar apparatus also are homologous in the N- and C-terminal regions to FlgK, but are excluded from this model. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274162 [Multi-domain] Cd Length: 323 Bit Score: 56.97 E-value: 2.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 3 SSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVfedllyqtirqpgaQSSEQTTLPSGLQIGTGVRPVATERLHS 82
Cdd:TIGR02492 1 SLLNIAKSGLSASQIALSVTSNNIANANTPGYSRQRAV--------------LTAVPAGGQGGKQIGTGVKVTSIRRIQD 66
|
....*....
gi 78100014 83 QGNLSQTNN 91
Cdd:TIGR02492 67 QFLDNQYRR 75
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
1-83 |
1.55e-08 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 54.88 E-value: 1.55e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVfedllyqtirqpgaQSSEQTTLPSGLQIGTGVRPVATERL 80
Cdd:COG1256 2 LFSALNIALSGLNAAQRALDVTSHNIANANTPGYSRQRVV--------------LSAAGPTATGAGQVGTGVRVTGIRRI 67
|
...
gi 78100014 81 HSQ 83
Cdd:COG1256 68 RDE 70
|
|
| flgK |
PRK07739 |
flagellar hook-associated protein FlgK; Validated |
4-83 |
2.25e-08 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236084 [Multi-domain] Cd Length: 507 Bit Score: 54.25 E-value: 2.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 4 SLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFedllyQTIRQPGAQSSEQTTLPsgLQIGTGVRPVATERLHSQ 83
Cdd:PRK07739 7 GLETARRGLFAQQAALYVTGHNIANANTPGYTRQRVNL-----AATPPYPTPGMNRPKIP--GQMGTGVEAGSVERIRDQ 79
|
|
| flgE |
PRK05841 |
flagellar hook protein FlgE; Validated |
1-136 |
1.00e-07 |
|
flagellar hook protein FlgE; Validated
Pssm-ID: 235620 [Multi-domain] Cd Length: 603 Bit Score: 52.54 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVrpVATErl 80
Cdd:PRK05841 1 MNDTLLNAYSGIKTHQFGLDSLSNNIANVNTLGYRSNIPEFKTLFSSHLDALNAKSVVANDRNYGVTGSSNA--ISNK-- 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 81 hsQGNLSQTNNSKDVAIKGQGFFQV---------MLPDGSSA-----YTRDGSFQVDQNGQLVTAGGFQV 136
Cdd:PRK05841 77 --DGEYKPSDGEFHMAYQGKGWFVVgpnkngsmtINKDGFSKkqdnyFTRDGSFARDADGYLVNPEGYYV 144
|
|
| flgK |
PRK08471 |
flagellar hook-associated protein FlgK; Validated |
193-257 |
6.80e-07 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236270 [Multi-domain] Cd Length: 613 Bit Score: 50.05 E-value: 6.80e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 78100014 193 TETQSSGAPNESTPGLNGAglLYQGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKL 257
Cdd:PRK08471 546 SDTEKNNRINDTNKALLNS--VKKEYQSISGVSTDEELVNLIKFQSSYGAAAKIITTIDQMLDTL 608
|
|
| flgK |
PRK08471 |
flagellar hook-associated protein FlgK; Validated |
3-81 |
1.04e-06 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236270 [Multi-domain] Cd Length: 613 Bit Score: 49.28 E-value: 1.04e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 78100014 3 SSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVfedllyqtirqpgaQSSEQTTLPSGLQIGTGVRPVATERLH 81
Cdd:PRK08471 6 SSLNTGYTGLQAAQVMVDTTGNNISNASSEFYTRQRVV--------------QSAQAALNTGGGNVGTGTDIETIVRIH 70
|
|
| FlgB |
COG1815 |
Flagellar basal body rod protein FlgB [Cell motility]; |
7-95 |
1.05e-06 |
|
Flagellar basal body rod protein FlgB [Cell motility];
Pssm-ID: 441420 Cd Length: 135 Bit Score: 46.82 E-value: 1.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 7 IAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNL 86
Cdd:COG1815 11 LLEKALDLRSLRQEVIASNIANADTPGYKARDVDFEAALKAALGGGSAGLALATTNPRHIPGSAGSSVSPEVLYRTPTQP 90
|
....*....
gi 78100014 87 SQTNNSKDV 95
Cdd:COG1815 91 SLDGNTVDL 99
|
|
| flgC |
PRK05681 |
flagellar basal body rod protein FlgC; Reviewed |
1-42 |
1.15e-06 |
|
flagellar basal body rod protein FlgC; Reviewed
Pssm-ID: 235556 [Multi-domain] Cd Length: 135 Bit Score: 46.74 E-value: 1.15e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNG------FKRQRAVFE 42
Cdd:PRK05681 3 LFSSFNIAGSGLSAQSQRLNVISSNIANADSTAapdgdpYRRKQVVFA 50
|
|
| flgC |
PRK12628 |
flagellar basal body rod protein FlgC; Provisional |
217-260 |
3.32e-06 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 79089 Cd Length: 140 Bit Score: 45.60 E-value: 3.32e-06
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 78100014 217 GYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:PRK12628 95 GFVYTSNINYVEEMANIISASRSYQMNIELLNTTKQLMQRTLQL 138
|
|
| FlgK |
COG1256 |
Flagellar hook-associated protein FlgK [Cell motility]; |
222-257 |
1.33e-05 |
|
Flagellar hook-associated protein FlgK [Cell motility];
Pssm-ID: 440868 [Multi-domain] Cd Length: 479 Bit Score: 45.64 E-value: 1.33e-05
10 20 30
....*....|....*....|....*....|....*.
gi 78100014 222 SNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKL 257
Cdd:COG1256 439 SGVNLDEEMANLIKFQQAYQANARVITTADEMLDTL 474
|
|
| flgB |
PRK12623 |
flagellar basal body rod protein FlgB; Provisional |
9-45 |
1.39e-05 |
|
flagellar basal body rod protein FlgB; Provisional
Pssm-ID: 183630 Cd Length: 131 Bit Score: 43.62 E-value: 1.39e-05
10 20 30
....*....|....*....|....*....|....*..
gi 78100014 9 KTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLL 45
Cdd:PRK12623 17 KKGLDASSYRGKVISNNIANVNTKGYKRHYVTFEENL 53
|
|
| flgC |
PRK12630 |
flagellar basal body rod protein FlgC; Provisional |
1-45 |
5.59e-05 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183635 Cd Length: 143 Bit Score: 42.13 E-value: 5.59e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVST----NG--FKRQRAVFEDLL 45
Cdd:PRK12630 3 AFDTMRISASGLSAERLRMDTIASNIANATTtrtaDGgpYKRKIAVFQENL 53
|
|
| FlgB |
TIGR01396 |
flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components ... |
4-95 |
8.75e-05 |
|
flagellar basal-body rod protein FlgB; This model represents FlgB, one of several components of bacterial flagella that share a domain described by pfam00460. FlgB is part of the basal body. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 273598 [Multi-domain] Cd Length: 131 Bit Score: 41.22 E-value: 8.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 4 SLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQSSE--QTTLPSGLQIGTGVRPVATERLH 81
Cdd:TIGR01396 4 AFGLLQQALDVRSLRQEVIANNIANVDTPGYKAKDVSFEAELKKALDNERNSKLTlaRTDTRPRHLNAQDSNSVEPSLQY 83
|
90
....*....|....*
gi 78100014 82 SQGNLSQTN-NSKDV 95
Cdd:TIGR01396 84 DYTTQVKNDgNNVDI 98
|
|
| flgC |
PRK12631 |
flagellar basal body rod protein FlgC; Provisional |
217-256 |
1.43e-04 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183636 Cd Length: 138 Bit Score: 40.71 E-value: 1.43e-04
10 20 30 40
....*....|....*....|....*....|....*....|
gi 78100014 217 GYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQK 256
Cdd:PRK12631 93 GFIYKPNVNVMEEMADMISASRSYQMNVQVAEAAKSMLQQ 132
|
|
| flgK |
PRK06665 |
flagellar hook-associated protein FlgK; Validated |
3-83 |
1.67e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180650 [Multi-domain] Cd Length: 627 Bit Score: 42.73 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 3 SSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDllYQTIRQPGAQSSEQTTlpsglQIGTGVRPVATERLHS 82
Cdd:PRK06665 6 SGIEIGKRSLFAHKQALQTTGHNISNASTKGYSRQRVTMKT--FDPLYAPSLNRAEKPG-----QIGQGVEIQSIERIRD 78
|
.
gi 78100014 83 Q 83
Cdd:PRK06665 79 E 79
|
|
| flgK |
PRK05683 |
flagellar hook-associated protein FlgK; Validated |
3-100 |
1.94e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235558 [Multi-domain] Cd Length: 676 Bit Score: 42.41 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 3 SSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVfedllyqtirqPGAQSSEQTtlpSGLQIGTG-----VRPVAT 77
Cdd:PRK05683 2 SLISIGLSGLGASQTALAVTGNNIANVDTAGYSRQQTV-----------QTTKASQQS---GAGYIGTGttladVRRIYN 67
|
90 100
....*....|....*....|...
gi 78100014 78 ERLHSQGNLSQTNNSKDVAIKGQ 100
Cdd:PRK05683 68 SFLDTQLRTATSLNSDASAYLGQ 90
|
|
| Flg_bb_rod |
pfam00460 |
Flagella basal body rod protein; |
5-34 |
3.19e-04 |
|
Flagella basal body rod protein;
Pssm-ID: 459821 [Multi-domain] Cd Length: 30 Bit Score: 37.16 E-value: 3.19e-04
10 20 30
....*....|....*....|....*....|
gi 78100014 5 LWIAKTGLDAQQTNMDVIANNLANVSTNGF 34
Cdd:pfam00460 1 LYTAVSALNAQQIRLDVIANNIANANTPGY 30
|
|
| flgC |
PRK12630 |
flagellar basal body rod protein FlgC; Provisional |
216-256 |
4.90e-04 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183635 Cd Length: 143 Bit Score: 39.43 E-value: 4.90e-04
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 78100014 216 QGYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQK 256
Cdd:PRK12630 97 EGYVSMPNVNVLNEMADMMASTRSYEANVTAINAEKSMFSK 137
|
|
| flgK |
PRK06665 |
flagellar hook-associated protein FlgK; Validated |
221-254 |
7.89e-04 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 180650 [Multi-domain] Cd Length: 627 Bit Score: 40.42 E-value: 7.89e-04
10 20 30
....*....|....*....|....*....|....
gi 78100014 221 TSNVNVAEELVNMIQVQRAYEINSKAVSTTDQML 254
Cdd:PRK06665 585 VSGVNLDEELANMIEFQHGYNASARFISVSNELL 618
|
|
| flgK |
PRK06945 |
flagellar hook-associated protein FlgK; Validated |
1-92 |
1.88e-03 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 235895 [Multi-domain] Cd Length: 651 Bit Score: 39.23 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 78100014 1 MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVfedllyqtirqpgaQSSEQTTLPSGLQIGTGVRPVATERL 80
Cdd:PRK06945 1 SSSLLNIGLSGLNAAQWGLTTTGHNISNAATPGYSRQRVV--------------QAEAGGQYTGSGYLGQGVNVVTVKRQ 66
|
90
....*....|..
gi 78100014 81 HSQGNLSQTNNS 92
Cdd:PRK06945 67 YSQYLSAQLNNA 78
|
|
| flgB |
PRK12622 |
flagellar basal body rod protein FlgB; Provisional |
12-56 |
5.37e-03 |
|
flagellar basal body rod protein FlgB; Provisional
Pssm-ID: 183629 Cd Length: 135 Bit Score: 36.44 E-value: 5.37e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 78100014 12 LDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLLYQTIRQPGAQS 56
Cdd:PRK12622 15 LDVLSLRQSVIADNIANVDTPNFKRSKVTFESELERAILNEDKND 59
|
|
| flgC |
PRK12632 |
flagellar basal body rod protein FlgC; Provisional |
217-260 |
5.70e-03 |
|
flagellar basal body rod protein FlgC; Provisional
Pssm-ID: 183637 [Multi-domain] Cd Length: 130 Bit Score: 35.94 E-value: 5.70e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 78100014 217 GYVETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKLTQL 260
Cdd:PRK12632 84 GYYDGSNVDLVVEIADAREAQRSYEANLRMFDQARQMSSSLLDL 127
|
|
| flgK |
PRK12714 |
flagellar hook-associated protein FlgK; Provisional |
220-257 |
5.99e-03 |
|
flagellar hook-associated protein FlgK; Provisional
Pssm-ID: 183697 [Multi-domain] Cd Length: 624 Bit Score: 37.62 E-value: 5.99e-03
10 20 30
....*....|....*....|....*....|....*...
gi 78100014 220 ETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKL 257
Cdd:PRK12714 582 SISGVNLDEEAANMLKLQQAYQAAAQMISTADTMFQAI 619
|
|
| flgC |
PRK12782 |
flagellar basal body rod protein FlgC; Reviewed |
3-33 |
6.94e-03 |
|
flagellar basal body rod protein FlgC; Reviewed
Pssm-ID: 139220 Cd Length: 138 Bit Score: 35.89 E-value: 6.94e-03
10 20 30
....*....|....*....|....*....|.
gi 78100014 3 SSLWIAKTGLDAQQTNMDVIANNLANVSTNG 33
Cdd:PRK12782 7 ASSRIASSGLEAQSTRLRVVSENLANAQSTG 37
|
|
| flgK |
PRK07739 |
flagellar hook-associated protein FlgK; Validated |
220-257 |
8.02e-03 |
|
flagellar hook-associated protein FlgK; Validated
Pssm-ID: 236084 [Multi-domain] Cd Length: 507 Bit Score: 37.30 E-value: 8.02e-03
10 20 30
....*....|....*....|....*....|....*...
gi 78100014 220 ETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMLQKL 257
Cdd:PRK07739 461 SVSGVSLDEEMTNMIKFQHAYNAAARMITAIDEMLDKI 498
|
|
| |
