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Conserved domains on  [gi|3915413|sp|P75780|]
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RecName: Full=Catecholate siderophore receptor Fiu; AltName: Full=Ferric iron uptake protein; AltName: Full=TonB-dependent receptor Fiu; Flags: Precursor

Protein Classification

catecholate siderophore receptor Fiu( domain architecture ID 11484502)

catecholate siderophore receptor Fiu is involved in the active transport across the outer membrane of iron complexed with catecholate siderophores such as dihydroxybenzoylserine and dihydroxybenzoate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
1-760 0e+00

catecholate siderophore receptor Fiu; Provisional


:

Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 1376.82  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413     1 MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE 80
Cdd:PRK09840   1 MENNRNFPARQFHSLAFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPDQSADPKFSQPLADTTQTITVISE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    81 QVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD 160
Cdd:PRK09840  81 QVIKDQGATNLTEALRNVPGVGTFFAGENGNTTTGDAIYMRGFDTSNSIYVDGIRDIGSISRDTFNTEQVEVIKGPSGTD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   161 YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA 240
Cdd:PRK09840 161 YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   241 FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND 320
Cdd:PRK09840 241 FGLGTANRLYLNYLHVTQNNTPDGGIPTIGLPGYSAPSAGRAALNHAGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   321 NTTIRNTTRWSRVKQDYLMTAIMGGASNITQPT-SDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVE 399
Cdd:PRK09840 321 NTTLRNTTRWSRVKQDYLLTAIMGGASNITTPTpSDVNTWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVE 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   400 FTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSAT 479
Cdd:PRK09840 401 FTRETQTNYGVNPVTLPAVNLYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQLTRDWELNGGIRLDNYHTEYDSAT 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   480 ACGGSGRGAITCPTGVAKGSPVTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRT 559
Cdd:PRK09840 481 ACGGSGRGAITCPAGVAKGSPVTTVDTAKSGNLVNWKAGALYKLTENGNVYINYAVSQQPPGGSNFALAQSGSGNSANRT 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   560 DFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKA 639
Cdd:PRK09840 561 DFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKA 640
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   640 TIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNL 719
Cdd:PRK09840 641 TVKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHRGSDGAVGTPAFTEGYWVADAKLGYRVNRNL 720
                        730       740       750       760
                 ....*....|....*....|....*....|....*....|.
gi 3915413   720 DFQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF 760
Cdd:PRK09840 721 DLQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF 761
 
Name Accession Description Interval E-value
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
1-760 0e+00

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 1376.82  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413     1 MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE 80
Cdd:PRK09840   1 MENNRNFPARQFHSLAFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPDQSADPKFSQPLADTTQTITVISE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    81 QVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD 160
Cdd:PRK09840  81 QVIKDQGATNLTEALRNVPGVGTFFAGENGNTTTGDAIYMRGFDTSNSIYVDGIRDIGSISRDTFNTEQVEVIKGPSGTD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   161 YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA 240
Cdd:PRK09840 161 YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   241 FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND 320
Cdd:PRK09840 241 FGLGTANRLYLNYLHVTQNNTPDGGIPTIGLPGYSAPSAGRAALNHAGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   321 NTTIRNTTRWSRVKQDYLMTAIMGGASNITQPT-SDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVE 399
Cdd:PRK09840 321 NTTLRNTTRWSRVKQDYLLTAIMGGASNITTPTpSDVNTWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVE 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   400 FTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSAT 479
Cdd:PRK09840 401 FTRETQTNYGVNPVTLPAVNLYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQLTRDWELNGGIRLDNYHTEYDSAT 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   480 ACGGSGRGAITCPTGVAKGSPVTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRT 559
Cdd:PRK09840 481 ACGGSGRGAITCPAGVAKGSPVTTVDTAKSGNLVNWKAGALYKLTENGNVYINYAVSQQPPGGSNFALAQSGSGNSANRT 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   560 DFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKA 639
Cdd:PRK09840 561 DFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKA 640
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   640 TIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNL 719
Cdd:PRK09840 641 TVKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHRGSDGAVGTPAFTEGYWVADAKLGYRVNRNL 720
                        730       740       750       760
                 ....*....|....*....|....*....|....*....|.
gi 3915413   720 DFQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF 760
Cdd:PRK09840 721 DLQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF 761
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
63-760 0e+00

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 632.68  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   63 KFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVgAFFAGENGNsttGDAIYMRGADTSNSIYIDGIRDIGSVSR 142
Cdd:COG4774   1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGV-TFGAGEGGN---GDSFSIRGFSASGDIYVDGLRDPGQYRR 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  143 DTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKThD 222
Cdd:COG4774  77 DTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDDLAYRLNGMYRDS-D 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  223 AGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIglpgysapsagtaALNHSGKVDTHNFYGTDSDY 302
Cdd:COG4774 156 SYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVPAV-------------ANGRPVDVDRSTFYGQPDDY 222
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  303 DDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAimggasnitqPTSDVNSWTWSRTANTKDVSNKILTNQTNLT 382
Cdd:COG4774 223 SDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTY----------PTGGNATGTVTRSAYRRDQDNDTLSNQTDLT 292
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  383 STFYTGSIGHDVSTGVEFTRETQTNYGVNPV-TLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFE 461
Cdd:COG4774 293 GKFDTGGVKHTLLAGVEYSREDSDNARYSGGgTAPTVNLYNPVYGAPVTGPTLGGADNDSRTDTTGLYLQDTISLTDRWS 372
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  462 LNGGIRLDNYHTEYDSATAcggsgrgaitcptgvakgspvTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPG 541
Cdd:COG4774 373 LLAGLRYDRFDTDYTDRTT---------------------GATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGG 431
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  542 GNNFAlaqsgsgnSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQN--DDGTYSQYGKKRVEGYEIS 619
Cdd:COG4774 432 GAPSL--------SNAGQALDPEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTNVRTTDpaNPGVYVQTGEQRSRGVELE 503
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  620 VAGNITPAWQVIGGYTQQKATIKNGKDVAQDGsSSLPYTPEHAFTLWSQYQAT-DDISVGAGARYIGSMHKGSDGAVGTP 698
Cdd:COG4774 504 ATGELTPGWSVLAGYTYLDAEITKSANAANVG-NRLPNVPRHSASLWTTYDLPlPGLTLGGGVRYVGSRYADAANTVKLP 582
                       650       660       670       680       690       700
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 3915413  699 afteGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASINKSGYrYHPGEPRTFLLTANMHF 760
Cdd:COG4774 583 ----SYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASAYGSGY-VTPGAPRTVLLSASYRF 639
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
74-760 1.01e-86

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 286.65  E-value: 1.01e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   74 TMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTtgdaIYMRG-ADTSNSIYIDGIRDIGSVSR--------DT 144
Cdd:cd01347   1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGST----ISIRGfGPDRTLVLVDGLPLASSNYGrgvdlntiPP 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  145 FNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSA---WFRRGTLDVN--QVIGDTTAVRLNVMGEK 219
Cdd:cd01347  77 ELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSgaLADDGAFGARLYGAYRD 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  220 TH-----DAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHN 294
Cdd:cd01347 157 GDgtidgDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRD 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  295 FYgtdsdyddstTDTATMRFEHDINDNT-TIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTantkdvsnK 373
Cdd:cd01347 237 RY----------RKRASLGLEHDLNDTGwTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDT--------T 298
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  374 ILTNQTNLTSTFYTGSIGHDVSTGVEFTRETQTnygvnpvtlpavniyhpdssihpggltrnganangqTDTFAIYAFDT 453
Cdd:cd01347 299 QLGFDAGLNAPFGTGPVAHTLTLGVEYRREELD------------------------------------EKQTALYAQDT 342
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  454 LQITRDFELNGGIRLDNYHTEydsatacggsgrgaitcptgvAKGSPVTTVDTAKSGNLMNWKAGALYHLTENGNVYINY 533
Cdd:cd01347 343 IELTDDLTLTLGLRYDHYDQD---------------------SKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASY 401
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  534 AVSQQPPGGNNFALAQSGSGNSANRT-DFKPQKANTSEIGTKWQvLDKRLLLTAALFRTDIENEVEQNDDGT-------Y 605
Cdd:cd01347 402 SQGFRAPSLGELYGGGSHGGTAAVGNpNLKPEKSKQYELGLKYD-PGDGLTLSAALFRIDIKNEIVSTPTNTglglvtvY 480
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  606 SQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDvaQDGSSSLPYTPEHAFTLWSQYQAT-DDISVGAGARYI 684
Cdd:cd01347 481 VNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDG--ATTGNRLPGIPKHTANLGLDYELPdEGLTAGGGVRYR 558
                       650       660       670       680       690       700       710
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 3915413  685 GSMhKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASIN--KSGYRYHPGEPRTFLLTANMHF 760
Cdd:cd01347 559 GKQ-YADTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTSLSvrGSGLYGYYGPGRTYYLSVSYKF 635
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
70-760 2.02e-65

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 229.61  E-value: 2.02e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413     70 DTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAffaGENGNSTTGDAIYMRG---ADTSNSIYIDGIRDIGSVSR---D 143
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVV---GGSGGTTQFGNITIRGfglEVDIDNVYLDGVPLLSRGNLaivD 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    144 TFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGD--TTAVRLNVMGEKtH 221
Cdd:TIGR01783  78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAdgTFRGRLNGARQD-G 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    222 DAGRDKVKNERYGVAPSVAFGLGTANRLYLN-YLHVTQHNTPDGGIPTIGlPGYSAPSAGTAALNHSGKVDTHNFYGtds 300
Cdd:TIGR01783 157 DSFYDGAGEETRLGATATDWQLDDRTLLRLGaYYQKERDRGGYGGLPASG-GTSGRDLSSDRYLGTSSNRNYDDREY--- 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    301 dyddsttDTATMRFEHDINDNTTIRNTTRWSRVKQDylmtAIMGGASNITQPTSDVNswtwsRTANTKDVSNKILTNQTN 380
Cdd:TIGR01783 233 -------LSYGLSLEYQFNDVWTGKQNLRYSYFDTD----SNQVQASGYSSDGGLFG-----RSLTVVNVKQDRVQIDAG 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    381 LTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPvtLPAVNIYHPDSSIHPGGLTRNGANAN---GQTDTFAIYAFDTLQIT 457
Cdd:TIGR01783 297 LDGEFETGPIEHDLLLGVSYGQRTTNRFNNTG--YPSDNIYSLTATSSARTDIGDSPKDRalsSTTKALNGVALQRILLA 374
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    458 RDFELNGGIRLDnyHTEYDSATACGGSgrgaitcptgvakgspvttvDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQ 537
Cdd:TIGR01783 375 DKWTLTLGGRYD--SVDVKSNNGVAGS--------------------TGKRDDSQFTPSLGVAYKPTDDWSLYASYAESF 432
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    538 QPPGgnnfaLAQSGSGNSANrtDFKPQKANTSEIGTKWQvLDKRLLLTAALFRTDIENEVEQNDDG--TYSQYGKKRVEG 615
Cdd:TIGR01783 433 KPGG-----YYPKGAGNSGD--ILEPEKGKNYELGVRYD-LGDSLLATAALFRITKDNQLVQDPVNgtFSVNAGKTRNRG 504
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    616 YEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGsSSLPYTPEHAFTLWSQYQATDD---ISVGAGARYIGSmHKGSD 692
Cdd:TIGR01783 505 VELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQG-NTVPFVPKHTASLWASYAPPVGdngLTLGGGVQYTGK-AYVDG 582
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 3915413    693 GAVGTpafTEGYWVADAKLGYRVNR--NLDFQLNVYNLFDTDYVASINK---SGYRYhPGEPRTFLLTANMHF 760
Cdd:TIGR01783 583 GNTGK---VPSYTVVDLSVRYDLTKkkNLTLALNVNNLFDRDYYTSGYRwgpSAYIY-PGAPRTVGLSVSYDF 651
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
316-759 1.15e-42

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 161.86  E-value: 1.15e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    316 HDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVS 395
Cdd:pfam00593  55 YSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLL 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    396 TGVEFTRETQTNYGVNPVTLPAVNIYHPDSSihpggltrngANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEY 475
Cdd:pfam00593 135 LGVELRTAGLDYRRLDDDAYDPYDPANPSSS----------SYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDG 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    476 DSATAcggsgrgaitcptgvakgspvTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNS 555
Cdd:pfam00593 205 DDGNG---------------------GGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGG 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    556 ANR---TDFKPQKANTSEIGTKWQvlDKRLLLTAALFRTDIENEVEQNDDG--------TYSQYGKKRVEGYEISVAGNI 624
Cdd:pfam00593 264 AVAggnPDLKPETSDNYELGLKYD--DGRLSLSLALFYIDIKNLITSDPDGpglggtvyTYTNVGKARIRGVELELSGRL 341
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    625 tpaWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQ-ATDDISVGAGARYIGSMhKGSDGAVGTPAFTEG 703
Cdd:pfam00593 342 ---WGLGLSGGGYTYTDADDDADADDTGNPLPNVPRHTANLGLTYDfPLGGWGARLGARYVGSG-ERRYGDAANTFKTPG 417
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 3915413    704 YWVADAKLGYRVNRNLDFQLNVYNLFDTDY--VASINKSGYRYHPGEPRTFLLTANMH 759
Cdd:pfam00593 418 YTLVDLSAGYRLNKNLTLRLGVNNLFDKYYkrYYSSGGGNLGGYPGPGRTFYLGLSYK 475
 
Name Accession Description Interval E-value
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
1-760 0e+00

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 1376.82  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413     1 MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISE 80
Cdd:PRK09840   1 MENNRNFPARQFHSLAFFAGLCIGITPVAQALAAEGQTNADDTLVVEASTPSLYAPDQSADPKFSQPLADTTQTITVISE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    81 QVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDTFNTEQVEVIKGPSGTD 160
Cdd:PRK09840  81 QVIKDQGATNLTEALRNVPGVGTFFAGENGNTTTGDAIYMRGFDTSNSIYVDGIRDIGSISRDTFNTEQVEVIKGPSGTD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   161 YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA 240
Cdd:PRK09840 161 YGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVA 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   241 FGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND 320
Cdd:PRK09840 241 FGLGTANRLYLNYLHVTQNNTPDGGIPTIGLPGYSAPSAGRAALNHAGKVDTHNFYGTDSDYDDSTTDTATMRFEHDIND 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   321 NTTIRNTTRWSRVKQDYLMTAIMGGASNITQPT-SDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVE 399
Cdd:PRK09840 321 NTTLRNTTRWSRVKQDYLLTAIMGGASNITTPTpSDVNTWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVE 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   400 FTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSAT 479
Cdd:PRK09840 401 FTRETQTNYGVNPVTLPAVNLYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQLTRDWELNGGIRLDNYHTEYDSAT 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   480 ACGGSGRGAITCPTGVAKGSPVTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRT 559
Cdd:PRK09840 481 ACGGSGRGAITCPAGVAKGSPVTTVDTAKSGNLVNWKAGALYKLTENGNVYINYAVSQQPPGGSNFALAQSGSGNSANRT 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   560 DFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKA 639
Cdd:PRK09840 561 DFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKA 640
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   640 TIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNL 719
Cdd:PRK09840 641 TVKNGKDVAQDGSSSLPYTPEHAFTLWSQYQATDDLSVGGGARYIGSMHRGSDGAVGTPAFTEGYWVADAKLGYRVNRNL 720
                        730       740       750       760
                 ....*....|....*....|....*....|....*....|.
gi 3915413   720 DFQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF 760
Cdd:PRK09840 721 DLQLNVYNLFDTDYVASINKSGYRYHPGEPRTFLLTANMHF 761
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
63-760 0e+00

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 632.68  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   63 KFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVgAFFAGENGNsttGDAIYMRGADTSNSIYIDGIRDIGSVSR 142
Cdd:COG4774   1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGV-TFGAGEGGN---GDSFSIRGFSASGDIYVDGLRDPGQYRR 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  143 DTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGEKThD 222
Cdd:COG4774  77 DTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGSDGQRRATLDVNGPLGDDLAYRLNGMYRDS-D 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  223 AGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIglpgysapsagtaALNHSGKVDTHNFYGTDSDY 302
Cdd:COG4774 156 SYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGVPAV-------------ANGRPVDVDRSTFYGQPDDY 222
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  303 DDSTTDTATMRFEHDINDNTTIRNTTRWSRVKQDYLMTAimggasnitqPTSDVNSWTWSRTANTKDVSNKILTNQTNLT 382
Cdd:COG4774 223 SDSETDSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTY----------PTGGNATGTVTRSAYRRDQDNDTLSNQTDLT 292
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  383 STFYTGSIGHDVSTGVEFTRETQTNYGVNPV-TLPAVNIYHPDSSIHPGGLTRNGANANGQTDTFAIYAFDTLQITRDFE 461
Cdd:COG4774 293 GKFDTGGVKHTLLAGVEYSREDSDNARYSGGgTAPTVNLYNPVYGAPVTGPTLGGADNDSRTDTTGLYLQDTISLTDRWS 372
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  462 LNGGIRLDNYHTEYDSATAcggsgrgaitcptgvakgspvTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPG 541
Cdd:COG4774 373 LLAGLRYDRFDTDYTDRTT---------------------GATTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNPGG 431
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  542 GNNFAlaqsgsgnSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQN--DDGTYSQYGKKRVEGYEIS 619
Cdd:COG4774 432 GAPSL--------SNAGQALDPEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTNVRTTDpaNPGVYVQTGEQRSRGVELE 503
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  620 VAGNITPAWQVIGGYTQQKATIKNGKDVAQDGsSSLPYTPEHAFTLWSQYQAT-DDISVGAGARYIGSMHKGSDGAVGTP 698
Cdd:COG4774 504 ATGELTPGWSVLAGYTYLDAEITKSANAANVG-NRLPNVPRHSASLWTTYDLPlPGLTLGGGVRYVGSRYADAANTVKLP 582
                       650       660       670       680       690       700
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 3915413  699 afteGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASINKSGYrYHPGEPRTFLLTANMHF 760
Cdd:COG4774 583 ----SYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASAYGSGY-VTPGAPRTVLLSASYRF 639
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
19-760 1.52e-136

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 419.30  E-value: 1.52e-136
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   19 AGLCIGITPVAQALAAEGQTNAD----DTLVVEAS---TPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNL 91
Cdd:COG4773   6 AGSGLAAAAAGALAQAAAAAAAEattlPEVTVTGTaegTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTL 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   92 TDALKNVPGVGAffagENGNSTTGDAIYMRGADTSNsIYIDGIR--DIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGS 169
Cdd:COG4773  86 DDALRNVPGVTV----SSYDGGGRDSFSIRGFSIDN-YLRDGLPlgGFGGGQPDTANLERVEVLKGPAGLLYGAGSPGGL 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  170 INMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGD--TTAVRLNVMGEKThDAGRDKVKNERYGVAPSVAFGLGTAN 247
Cdd:COG4773 161 VNLVTKRPTAEPQGEVSLSAGSWDTYRATADVGGPLNEdgTLRYRLNAAYEDG-DSFRDGVDNRRTLIAPSLDWDLTDDT 239
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  248 RLYLNYLHVTQHNTPDGGIptiglpgysAPSAGTAAlnhsgKVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNT 327
Cdd:COG4773 240 TLTLGAEYQDDDSTGDRGF---------LPLDGTLL-----DLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRAN 305
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  328 TRWSRVKQDYLMTAIMGgasnitqpTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVSTGVEFTRETQTN 407
Cdd:COG4773 306 ARYSDSDRDGRSAYAYG--------APDAATGTLTRYASARDGDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDS 377
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  408 YGVNpvtLPAVNIYHPDSSIHPGGLTRNGANaNGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDSATacggsgrg 487
Cdd:COG4773 378 DSAT---AGTINIYNPVYGNLPEPDFDASDT-DTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRL-------- 445
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  488 aitcptgvakgspvTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPpggnnfalaQSGSGNSANRtdFKPQKAN 567
Cdd:COG4773 446 --------------GGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESFEP---------QSGADNNGNP--LDPETGK 500
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  568 TSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGT--YSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGK 645
Cdd:COG4773 501 QYEAGVKGELFDGRLNATLAVFDITQKNVATTDPDNPnfYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDA 580
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  646 DVAQDgsSSLPYTPEHAFTLWSQYQ----ATDDISVGAGARYIGSMHKGSDGAVGTPafteGYWVADAKLGYRVNRNLDF 721
Cdd:COG4773 581 DALEG--KRLTNVPRHTASLWTTYRfpsgALKGLGLGGGVRYVGERYGDAANTFTLP----SYTLVDAGARYDLGKNWTL 654
                       730       740       750
                ....*....|....*....|....*....|....*....
gi 3915413  722 QLNVYNLFDTDYVASINkSGYRYHPGEPRTFLLTANMHF 760
Cdd:COG4773 655 QLNVNNLFDKKYYASSG-SRGYVYYGAPRNVRLSLSYKF 692
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
63-744 6.46e-87

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 287.49  E-value: 6.46e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   63 KFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAffageNGNSTTGDAIYMRGADTSNS---IYIDGIR---- 135
Cdd:COG1629  10 RTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSV-----TSAGGGAGQISIRGFGGGGNrvlVLVDGVPlndp 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  136 ---DIGSVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQViGDTTAVR 212
Cdd:COG1629  85 sggDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGSYGTYRASLSLSGG-NGKLAYR 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  213 LNVMGEKTHDAgRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTaalnhsgkvdt 292
Cdd:COG1629 164 LSASYRDSDGY-RDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGYLTLAALRPRGAMDDGT----------- 231
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  293 hNFYGTDSDYDDSTTDTATMRFEHdINDNTTIRNTTRWSRVKQDYlmtaimggasnitqPTSDVNSWTWSRTANTKDVSN 372
Cdd:COG1629 232 -NPYSNDTDDNTRDRYSLSLEYEH-LGDGLKLSASAYYRYDDTDL--------------DSDFTPTPADGGTLEQTDFDN 295
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  373 KILTNQTNLTSTFYTGSiGHDVSTGVEFTRETQTNYGvnpvtlpavniYHPDSSIHPGGLTRNGANANGQTDTFAIYAFD 452
Cdd:COG1629 296 RTYGLELRLTYDLGFGG-KHTLLVGLDYQRQDLDGSG-----------YPLDLGSGSLPTLTSGADDDGTTTSLALYAQD 363
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  453 TLQITRDFELNGGIRLDNYHTEYDSATAcggsgrgaitcptgvakgsPVTTVDTAKSGNLMNWKAGALYHLTENGNVYIN 532
Cdd:COG1629 364 TYKLTDKLTLTAGLRYDYVSYDVDDTVT-------------------GTDSASGSRSYSAFSPSLGLTYQLSPNLSLYAS 424
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  533 YAVSQQPPGGNNFALAQSGSGNSANrTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDG-------TY 605
Cdd:COG1629 425 YSRGFRAPTFGELYANGTDPYSVGN-PDLKPETSTNYELGLRYRLLDGRLSLSLALFYSDVDNEILSVPLPndsgfstYY 503
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  606 SQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQD-GSSSLPYTPEHAFTLWSQYQATDDISVGAGARYI 684
Cdd:COG1629 504 TNAGKARSYGVELELSYQLTPGLSLNASYSYTDAKFDDDTDGSADlDGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYV 583
                       650       660       670       680       690       700
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  685 GSMhkgSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASINKSGYRY 744
Cdd:COG1629 584 GDR---YLDDANTQGAPGGYTLVDLGAGYRFGDNLTLSLGVDNLFDKKYATSLSVRASNV 640
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
74-760 1.01e-86

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 286.65  E-value: 1.01e-86
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   74 TMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTtgdaIYMRG-ADTSNSIYIDGIRDIGSVSR--------DT 144
Cdd:cd01347   1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGST----ISIRGfGPDRTLVLVDGLPLASSNYGrgvdlntiPP 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  145 FNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSA---WFRRGTLDVN--QVIGDTTAVRLNVMGEK 219
Cdd:cd01347  77 ELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGYGSDnsgSSGGGGFDVSgaLADDGAFGARLYGAYRD 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  220 TH-----DAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHN 294
Cdd:cd01347 157 GDgtidgDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRD 236
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  295 FYgtdsdyddstTDTATMRFEHDINDNT-TIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTantkdvsnK 373
Cdd:cd01347 237 RY----------RKRASLGLEHDLNDTGwTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDT--------T 298
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  374 ILTNQTNLTSTFYTGSIGHDVSTGVEFTRETQTnygvnpvtlpavniyhpdssihpggltrnganangqTDTFAIYAFDT 453
Cdd:cd01347 299 QLGFDAGLNAPFGTGPVAHTLTLGVEYRREELD------------------------------------EKQTALYAQDT 342
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  454 LQITRDFELNGGIRLDNYHTEydsatacggsgrgaitcptgvAKGSPVTTVDTAKSGNLMNWKAGALYHLTENGNVYINY 533
Cdd:cd01347 343 IELTDDLTLTLGLRYDHYDQD---------------------SKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASY 401
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  534 AVSQQPPGGNNFALAQSGSGNSANRT-DFKPQKANTSEIGTKWQvLDKRLLLTAALFRTDIENEVEQNDDGT-------Y 605
Cdd:cd01347 402 SQGFRAPSLGELYGGGSHGGTAAVGNpNLKPEKSKQYELGLKYD-PGDGLTLSAALFRIDIKNEIVSTPTNTglglvtvY 480
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  606 SQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDvaQDGSSSLPYTPEHAFTLWSQYQAT-DDISVGAGARYI 684
Cdd:cd01347 481 VNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRTDG--ATTGNRLPGIPKHTANLGLDYELPdEGLTAGGGVRYR 558
                       650       660       670       680       690       700       710
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 3915413  685 GSMhKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVASIN--KSGYRYHPGEPRTFLLTANMHF 760
Cdd:cd01347 559 GKQ-YADTANGNNTVKVPGYTLVDLSASYQFTKNLTLRLGVNNLFDKDYYTSLSvrGSGLYGYYGPGRTYYLSVSYKF 635
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
70-760 2.02e-65

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 229.61  E-value: 2.02e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413     70 DTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAffaGENGNSTTGDAIYMRG---ADTSNSIYIDGIRDIGSVSR---D 143
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVV---GGSGGTTQFGNITIRGfglEVDIDNVYLDGVPLLSRGNLaivD 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    144 TFNTEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGD--TTAVRLNVMGEKtH 221
Cdd:TIGR01783  78 PAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGTRSGYRTAFDLGGPLGAdgTFRGRLNGARQD-G 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    222 DAGRDKVKNERYGVAPSVAFGLGTANRLYLN-YLHVTQHNTPDGGIPTIGlPGYSAPSAGTAALNHSGKVDTHNFYGtds 300
Cdd:TIGR01783 157 DSFYDGAGEETRLGATATDWQLDDRTLLRLGaYYQKERDRGGYGGLPASG-GTSGRDLSSDRYLGTSSNRNYDDREY--- 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    301 dyddsttDTATMRFEHDINDNTTIRNTTRWSRVKQDylmtAIMGGASNITQPTSDVNswtwsRTANTKDVSNKILTNQTN 380
Cdd:TIGR01783 233 -------LSYGLSLEYQFNDVWTGKQNLRYSYFDTD----SNQVQASGYSSDGGLFG-----RSLTVVNVKQDRVQIDAG 296
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    381 LTSTFYTGSIGHDVSTGVEFTRETQTNYGVNPvtLPAVNIYHPDSSIHPGGLTRNGANAN---GQTDTFAIYAFDTLQIT 457
Cdd:TIGR01783 297 LDGEFETGPIEHDLLLGVSYGQRTTNRFNNTG--YPSDNIYSLTATSSARTDIGDSPKDRalsSTTKALNGVALQRILLA 374
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    458 RDFELNGGIRLDnyHTEYDSATACGGSgrgaitcptgvakgspvttvDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQ 537
Cdd:TIGR01783 375 DKWTLTLGGRYD--SVDVKSNNGVAGS--------------------TGKRDDSQFTPSLGVAYKPTDDWSLYASYAESF 432
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    538 QPPGgnnfaLAQSGSGNSANrtDFKPQKANTSEIGTKWQvLDKRLLLTAALFRTDIENEVEQNDDG--TYSQYGKKRVEG 615
Cdd:TIGR01783 433 KPGG-----YYPKGAGNSGD--ILEPEKGKNYELGVRYD-LGDSLLATAALFRITKDNQLVQDPVNgtFSVNAGKTRNRG 504
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    616 YEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGsSSLPYTPEHAFTLWSQYQATDD---ISVGAGARYIGSmHKGSD 692
Cdd:TIGR01783 505 VELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQG-NTVPFVPKHTASLWASYAPPVGdngLTLGGGVQYTGK-AYVDG 582
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 3915413    693 GAVGTpafTEGYWVADAKLGYRVNR--NLDFQLNVYNLFDTDYVASINK---SGYRYhPGEPRTFLLTANMHF 760
Cdd:TIGR01783 583 GNTGK---VPSYTVVDLSVRYDLTKkkNLTLALNVNNLFDRDYYTSGYRwgpSAYIY-PGAPRTVGLSVSYDF 651
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
23-760 2.88e-62

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 221.34  E-value: 2.88e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   23 IGITPVAQALAAEGQTNADDTLVVeastpslyapqqSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVg 102
Cdd:COG4772   5 LAAALLLAAAAAAEAATTLETVVV------------TGSRAAEARLKDVPGSVSVVDREELENQAATSLREVLRRVPGV- 71
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  103 aFFAGENGnstTGDA--IYMRGADTSNS----IYIDGIrDI---------GSVSRDTFNTEQVEVIKGPSGTDYGRSAPT 167
Cdd:COG4772  72 -NVQEEDG---FGLRpnIGIRGLGPRRSrgitLLEDGI-PIapapygdpaAYYFPDLERMERIEVLRGAAALRYGPQTVG 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  168 GSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDttavrLNVMGEKTHDAG---RDKVKNERYGVAPSVAFGLG 244
Cdd:COG4772 147 GAINFVTRTIPTAFGGELRVTGGSFGYRRTHASVGGTVGN-----FGYLVEYSRKRGdgfRDNSGFDINDFNAKLGYRLS 221
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  245 TANRLYLNYLHVTQHNtpdggiptiGLPGY-------SAPSAGTAALNhSGKVDtHNFYGtdsdyddsttdtatMRFEHD 317
Cdd:COG4772 222 DRQELTLKFQYYDEDA---------NTPGGltdaqfdADPRQSYRPAD-QFDTR-RTQLS--------------LRYEHQ 276
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  318 INDNTTIRNTTRWSRVKQDylmtaimggaSNITQPTSDVNSWTWSRTANTKDVSNkiLTNQTNLTSTFYTGSIGHDVSTG 397
Cdd:COG4772 277 LSDNTTLTTTAYYNDFSRN----------WYIRQNTADPNTPGLGLRGNPRGYRS--YGIEPRLTHRFELGGVPHTLEVG 344
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  398 VEFTRETQTNYGVNPVTLPAVNiyhpdssihpgGLTrNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEYDS 477
Cdd:COG4772 345 LRYHREEEDRKQYVNTYGQGRS-----------GAG-LRRDRRFSADALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTD 412
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  478 AtacggsgrgaitcptgvakGSPVTTVDTAKSGNLMNW--KAGALYHLTENGNVYINYAVSQQPPGGNNFAlaqsgsGNS 555
Cdd:COG4772 413 R-------------------YSTRTGGDDSGSNSYSEFlpGLGLLYQLTDNLQLYANVSRGFEPPTFGDLA------YGN 467
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  556 ANRTDFKPQKANTSEIGTKWQvLDKRLLLTAALFRTDIENEVEQ--NDDGTYSQY---GKKRVEGYEISVAGNITPA--- 627
Cdd:COG4772 468 GGNPDLKPEKSWNYELGTRGR-IGNGLSAEVALFYIDYDNELGScsAAGGDRSTFtnaGETRHQGLELALDYDLLKGggl 546
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  628 -WQVIGGYTQQKATIKNGKDVAQDGSSsLPYTPEHAFTLWSQYQaTDDISVGAGARYIGSMHkgSDGA----VGTPAFTE 702
Cdd:COG4772 547 gLPLFAAYTYTDAEFTSDFGPVFAGNR-LPYVPRHQLTAGLGYE-HGGWTANLNGRYVSEQF--TDAAntvaDGSFGKIP 622
                       730       740       750       760       770
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 3915413  703 GYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVAS-INKSGYRYHPGEPRTFLLTANMHF 760
Cdd:COG4772 623 SYTVLDLSASYDFGKNLSLFAGVNNLFDKRYIASrAPNYAAGIRPGPPRTVYAGLRLKF 681
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
16-722 5.56e-56

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 202.39  E-value: 5.56e-56
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   16 TFFAGLCIGITPVAQA-LAAEGQTNADDTLVVEAStpslyapqqsadpKFSRPVADTTRTMTVISEQVIKDQGATNLTDA 94
Cdd:COG4771   1 LLLASLLLLLALAAQAaDALAEDATELEEVVVTAT-------------RTEQSLSDAPASVSVITAEEIEKLGATDLADA 67
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   95 LKNVPGVgafFAGENGNSTTGDAIYMRGADTSNS-IYIDGIR-----DIGSVSRDTFNT---EQVEVIKGPSGTDYGRSA 165
Cdd:COG4771  68 LRLLPGV---SVTRSGGRGGSSGISIRGLGGDRVlVLIDGVPvnnpaLGGGGDLSYIPPddiERIEVIRGPASALYGSDA 144
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  166 PTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVN-QVIGDTTAVRLNVMGEKTH-------DAGRDKVKNERYGVAP 237
Cdd:COG4771 145 IGGVINIITKKPTDELEGSVSLGYGSNGNGTYSGSLSlGGPGDKLSFLLSGSYRDRDgyldyrnGGFVGNSGYERYNLNA 224
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  238 SVAFGLGTANRLYLNYLHVTQhntpDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFygtdsdyddsttdtatmRFEHD 317
Cdd:COG4771 225 KLGYRLSDNHRLSLSGGYSRQ----DRDGGPPTLGDTEISSDNAGDRDTTTDRGNYSL-----------------RYNGD 283
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  318 INDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQptsdvnswtwsrtantkdvsNKILTNQTNLTSTFytgSIGHDVSTG 397
Cdd:COG4771 284 LGDNLDLSLYYSRTDRDSTNGSLGGSTGSFSDSD--------------------DTTYGLELDLTYPL---GGNHTLTLG 340
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  398 VEFTRETQTNygvnpvtlpavniyhpdssihpgglTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYhteyds 477
Cdd:COG4771 341 AEYRYDDLDS-------------------------SSFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYY------ 389
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  478 atacggsgrgaitcptgvakgspvtTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGG--NNFALAQSGSGNS 555
Cdd:COG4771 390 -------------------------STFGASNYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLaeLYGSGTGTPGRYV 444
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  556 ANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDD----GTYSQY---GKKRVEGYEISVAGNITPAW 628
Cdd:COG4771 445 LGNPDLKPETSDNYELGLEYRLGNGGLSLSLTGFYTDIKDLIVLVPVgpgpGDVLQYenvGKARTYGLELELKYRLGKGL 524
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  629 QVIGGYTQQKATIKNGKDVAQdgsssLPYTPEHAFTLWSQYQATDDISVGAGARYIGSMHKGSDGAVgTPAFTEGYWVAD 708
Cdd:COG4771 525 TLTASYTYLDSKIDDGDTGEP-----LPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGR-LEGYTPGYTLLD 598
                       730
                ....*....|....
gi 3915413  709 AKLGYRVNRNLDFQ 722
Cdd:COG4771 599 LRASYKLTKNLTLS 612
PRK14050 PRK14050
TonB-dependent siderophore receptor;
18-754 4.36e-43

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 166.90  E-value: 4.36e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    18 FAGLCIGitpvAQALAAEGQTNADDTLVVE--------ASTP--SLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQG 87
Cdd:PRK14050  20 LAALVLS----GLVAAQEGNTTQLETIVVEggnaasatATGPvdGYVAKATATGSKTDTPITEIPQSVSVVGRQEMDDRG 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    88 ATNLTD-ALKNVPGVGAFFAGENGNSttgDAIYMRGAD-TSNSIYIDGIR----DIGSVSRDTFNTEQVEVIKGPSGTDY 161
Cdd:PRK14050  96 VTNKVDeALRYTPGVLSQPFGTDGDT---DWFYIRGFDaTQTGVFLDGLNlfsyGFGGFQIDPFMLERVEVLKGPASVLY 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   162 GRSAPTGSINMISKQPRND------SGIDasaSIGSAWFrrgTLDVNQVIGDTTAVRLNVMGE-KTHDAGRDKVKNERYG 234
Cdd:PRK14050 173 GGSNPGGIVNMVSKRPLDEplyyteIGIN---SYGNAFT---GFDVGDKLSDDGTVRYRVTGKvAGGDNYSDYSEDLRGF 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   235 VAPSVAFGLGTANRL--YLNYLHVTQHNTPDGGIPTIglpgysapsaGTAALNHSGKVDTHNFYGT-DSDYDDSTTDTAT 311
Cdd:PRK14050 247 IMPQITYAPDDATSLtvYGYLSGLDQVHVGNGFLPYV----------GTVVDAPFGKIDRDAFYGEpDIDNGSYAQQMLG 316
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   312 MRFEHDINDNTTIRNTTRWS--RVKQDYLMT-AIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNltSTFYTG 388
Cdd:PRK14050 317 YEFSHEFDNGWTFSQNARYGhlHKHEKGPYTyGYVGGATGLPDPTGPDYMLNRIGFEHRSKVDSFSIDNRLE--GEFDTG 394
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   389 SIGHDVSTGVEFT----RETQTNYGVNPVtlpavniyhpdSSIHPGGLTRNGAN---ANG--QTDTFAIYAFDTLQITRD 459
Cdd:PRK14050 395 ALTHNLLFGLDYKyyrlDQVQACCGATPI-----------SATNPVYGTTQGANfvyLDQilTQQQIGIYAQDQIRFGDG 463
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   460 F--ELNGgiRLDNYHTEYDSATacggsgrgaitcptgvakGSPVTTVDTAKSGnlmnwKAGALYHLTENGNVYINYAVSQ 537
Cdd:PRK14050 464 WlvTLNG--RYDYVDTDSDARI------------------GTSYESNDGALSG-----RAGLAYEFDNGLTPYVSAATFF 518
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   538 QPpggnnfaLAQSGSGNSAnrtdFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENeVEQNDDGTY--SQYGKKRVEG 615
Cdd:PRK14050 519 NP-------LVGTLASGPP----LKPEEGEQYEAGIKYEPSFIDGLITASVFQITKKN-VTVTDPLTFasTQLGEVRSRG 586
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   616 YEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSslPY-TPEHAFTLWSQYQATDD----ISVGAGARYIGSMHKG 690
Cdd:PRK14050 587 FELEGKVNLDDNWKALASFTYTDLEITEDANPSLIGNS--PYlVPETQASLWLDYAVTDGafegVSLGAGVRYQGESWAD 664
                        730       740       750       760       770       780
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 3915413   691 SDGAVGTPAFTegywVADAKLGYRVNrNLDFQLNVYNLFDTDYVAS---INKSGYryhpGEPRTFLL 754
Cdd:PRK14050 665 EANTLKVPAAT----LFDAAIRYEKN-DWGASLNVANLFDKEYVAGcqgLLVCGY----GESRTITL 722
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
316-759 1.15e-42

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 161.86  E-value: 1.15e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    316 HDINDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGSIGHDVS 395
Cdd:pfam00593  55 YSDTDRKRLSLGYDYDLGDGLSWLSTLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLL 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    396 TGVEFTRETQTNYGVNPVTLPAVNIYHPDSSihpggltrngANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNYHTEY 475
Cdd:pfam00593 135 LGVELRTAGLDYRRLDDDAYDPYDPANPSSS----------SYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDG 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    476 DSATAcggsgrgaitcptgvakgspvTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNS 555
Cdd:pfam00593 205 DDGNG---------------------GGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGGGGG 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    556 ANR---TDFKPQKANTSEIGTKWQvlDKRLLLTAALFRTDIENEVEQNDDG--------TYSQYGKKRVEGYEISVAGNI 624
Cdd:pfam00593 264 AVAggnPDLKPETSDNYELGLKYD--DGRLSLSLALFYIDIKNLITSDPDGpglggtvyTYTNVGKARIRGVELELSGRL 341
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    625 tpaWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLWSQYQ-ATDDISVGAGARYIGSMhKGSDGAVGTPAFTEG 703
Cdd:pfam00593 342 ---WGLGLSGGGYTYTDADDDADADDTGNPLPNVPRHTANLGLTYDfPLGGWGARLGARYVGSG-ERRYGDAANTFKTPG 417
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 3915413    704 YWVADAKLGYRVNRNLDFQLNVYNLFDTDY--VASINKSGYRYHPGEPRTFLLTANMH 759
Cdd:pfam00593 418 YTLVDLSAGYRLNKNLTLRLGVNNLFDKYYkrYYSSGGGNLGGYPGPGRTFYLGLSYK 475
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
29-736 6.31e-42

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 163.39  E-value: 6.31e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    29 AQALAAEGQtnADDTLVVEASTPS---------LYAPQQSAD-PKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNV 98
Cdd:PRK10044  29 VYAQAAVEP--KEETITVTAAPAPqesawgpaaTIAAKRSATgTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYT 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    99 PGVgafFAGENGNSTTGDAIYMRG---ADTSNSIYIDGIRDIG----SVSRDTFNTEQVEVIKGPSGTDYGRSAPTGSIN 171
Cdd:PRK10044 107 PGV---SVGTRGASNTYDHLIIRGfaaSGQSQNNYLDGLKLQGnfynDAVIDPYMLERAELMRGPVSVLYGKSNPGGLLN 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   172 MISKQPRNDSgidasasIGSAWFRRGT-------LDVNQVIGDTT--AVRLNVMGeKTHDAGRDKVKNERYGVAPSvaFG 242
Cdd:PRK10044 184 MVSKRPTTEP-------LKEVQFKMGTdnlfqtgFDFSDALDDDGvySYRLTGLA-RSANAQQKGSEEQRYAIAPS--FT 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   243 LGTANRLYLNYLHVTQhNTPDggiptIGLPGYsAPSAGTAALNHSGKVDTHNF-YGTDSDYDDSTTDTATMRFEHDINDN 321
Cdd:PRK10044 254 WRPDDKTNFTFLSYFQ-NEPE-----TGYYGW-LPKEGTVEPLPNGKRLPTDFnEGAKNNTYSRNEKMVGYSFDHEFNDT 326
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   322 TTIRNTTRWSRVKQDYLmtAIMGgasnitqptSDVNSwTWSRTANTKDV-SNKILTN---QTNLTSTFYTGSIGHDVSTG 397
Cdd:PRK10044 327 FTVRQNLRYAENKTSQR--SVYG---------YGVCS-DKGHYLNRGYVvDDEKLQNfsvDTQLQSKFATGDVDHTLLTG 394
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   398 VEFTR---ETQTNYGVNPvTLPAVNIYHPD-SSIHPGGLTRNGANANGQTDTfAIYAFDTLQITRDFELNGGirldnyht 473
Cdd:PRK10044 395 VDFMRmrnDINAWFGYAD-SVPLLNLYGPVnTDFDFNANSGPYQILNKQKQT-GLYVQDQAEWDKWLVTLGG-------- 464
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   474 EYDSATacggsgrgaiTCPTGVAKGSPVTTVDTAksgnlMNWKAGALYhLTENG-NVYINYAVSQQPpggnnfalaqsGS 552
Cdd:PRK10044 465 RYDWAD----------QSSLNRVNGTTDKRDDKQ-----FTWRGGVNY-LFDNGiTPYFSYSESFEP-----------SS 517
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   553 GNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFR-TDIENEVEQNDDGTYS-QYGKKRVEGYEISVAGNITPAWQV 630
Cdd:PRK10044 518 GTGKDGNIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQlTKTNNLTADPENSFFSvQGGEIRARGVELEAKAALSANVNV 597
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   631 IGGYTQQKA-----TIKNGKDVAQdgssslpyTPEHAFTLWSQYQ----ATDDISVGAGARYIGSmhkgSDGAVGTPAFT 701
Cdd:PRK10044 598 TGSYTYTDAeyttdTTYKGNTPAQ--------VPKHMASLWADYTffdgPLSGLTLGTGGRYTGS----SYGDPANSFKV 665
                        730       740       750
                 ....*....|....*....|....*....|....*....
gi 3915413   702 EGYWVADAKLGYRVNR-NL---DFQLNVYNLFDTDYVAS 736
Cdd:PRK10044 666 GSYTVVDALVKYDLARfGMagsSVALNVNNLFDREYVAS 704
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
28-731 5.88e-35

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 142.35  E-value: 5.88e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    28 VAQALAAEGQTNADDTLVVEASTPSL-----YAPQQSA-DPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPG- 100
Cdd:PRK14049  30 AGQESVSNEASTALETLVVNGGSGGVitadgYVATSSAtGAKVDTPFLETPQSISSVTEQQLKDRNPQTLLETLAYTPGa 109
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   101 -VGAFfagenGNSTTGDAIYMRGAD-TSNSIYIDGIRDIGSVS----RDTFNTEQVEVIKGPSGTDYGRSAPTGSINMIS 174
Cdd:PRK14049 110 rVGAF-----GFDPRFDAFFVRGFDvTYTGVFRDNLRQPGASSsifkTEPYGLEGVSILRGPSSALYGASGAGGLFNLIT 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   175 KQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDTTAV--RLNVMGeKTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLn 252
Cdd:PRK14049 185 KRPTEEPLREVQVQYGTNNRYQGQFDFSGPVNETDPVyyRLTGLL-RDADTEQVGVPDDRAYIAPAFTWKPDEDTRLTV- 262
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   253 YLHVTQHNTpdGGIPTIglpgYSAPSAGTAALNHSGKVDTHNFYGTDSDYDdsttdtatMRFEHDINDNTTIRNTTRWSR 332
Cdd:PRK14049 263 LGEYSRTKT--GGTAAY----YNDPLTGEVTDIFAGNPAFNDSVQKQGRIG--------YEFEHRLNDTFVFRQNARVST 328
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   333 VKQDylmtAIMGGAsnitQPTSDVNSWTWSRTANT--KDVSNKILTNQtnLTSTFYTGSIGHDVSTGVEFTR---ETQTN 407
Cdd:PRK14049 329 LNID----ADWAFA----YAPNAADPTLLDSSAGTydERLTAFVIDNQ--LEAKFDTGAFEHTLLAGVDYTKlrfRALNG 398
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   408 YGVNPvtlpavniyhPDSSIHPggltrnganangqTDTFAIYAFDTLQITRDFELNGGIRLDNyHTEYDSATACGGSGRG 487
Cdd:PRK14049 399 RGVSP----------PLDTKNP-------------TQGRPVAAIDFSTRTVQDQWQLGTYLQD-QIRYDAWTLTAGGRYD 454
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   488 AITCPTGVAKGSPVTTVDTAKSGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNfalaqsgsgnSANRTDFKPQKAN 567
Cdd:PRK14049 455 WVSTDTDTTDLATDSLTTVSQKDKEFSGRIGLTYETDFGLAPYISYSTAFSPNAGFN----------RATNQPFKPTESE 524
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   568 TSEIGTKWQVLDKRLLLTAALFRTDIEN----EVEQNDDGTYS---QYGKKRVEGYEISVAGNITPAWQVIGGYTQQKAT 640
Cdd:PRK14049 525 QQEVGVKYLLPNSNTLITAALFNIDQTNglyyEVVFLAAGPTNiqvQRGKLRSRGFELEANTSLDNGLSLIASYTYTDVK 604
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   641 IKNGkdVAQDGSSSLPYTPEHAFTLWSQYQATDD-----ISVGAGARYIGSMH-------KGSDGAVGTPAFTEGYWVAD 708
Cdd:PRK14049 605 IIQG--PEGTIGNEVSSVPNHMASAWAHYTLPEGgplygLGLGAGARFVGSSYgndqntfKNSSRVLFDASVGYDFAAID 682
                        730       740
                 ....*....|....*....|...
gi 3915413   709 AKLgyrvnRNLDFQLNVYNLFDT 731
Cdd:PRK14049 683 KKY-----EGLMLQVNATNLFDR 700
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
63-331 2.06e-22

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 98.02  E-value: 2.06e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   63 KFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFFAGENGNSTTgdaIYMRGADTSNS-IYIDGIR----DI 137
Cdd:COG4206   7 RLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAAS---ISIRGLGSNQTlVLIDGVPlndpSL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  138 GSVSRDTFNT---EQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVNQVIGDtTAVRLN 214
Cdd:COG4206  84 GGVDLSLIPPddiERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSASYGSFGTRRLSASLSGGAGK-FSYSLS 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413  215 VMGEKTHD------AGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHNtpdggiptiglpGYSAPSAGTAALNHSG 288
Cdd:COG4206 163 ASYRRSDGyryndpDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSDSER------------GYPGAVGSDRNLRLSL 230
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 3915413  289 KVDTHNFYGTDSDYDDSTTDTATMRFEHDINDNTTIRNTTRWS 331
Cdd:COG4206 231 SLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAG 273
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
67-168 1.39e-21

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 90.02  E-value: 1.39e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413     67 PVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAFfageNGNSTTGDAIYMRGADTS-NSIYIDGIR-------DIG 138
Cdd:pfam07715   1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVS----SGGGGGGSSISIRGFGSNrVLVLVDGVPlnsggggSVD 76
                          90       100       110
                  ....*....|....*....|....*....|
gi 3915413    139 SVSRDTFNTEQVEVIKGPSGTDYGRSAPTG 168
Cdd:pfam07715  77 LNSIDPEDIERVEVLKGPASALYGSGAIGG 106
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
21-760 1.27e-20

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 96.86  E-value: 1.27e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    21 LCIGITPVAQALAAEgqTNADDTLVVEASTPSLYAPQQ--------SADPKFSRPVADTTRTMTVISEQVIKDQGATNLT 92
Cdd:PRK10003  22 GCIALALLPSAAFAA--PATEDTVIVEGSATAPVDDGEqdysvkttSAGTKMQMTQRDIPQSVSIVSQQRMEDQQLQTLG 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    93 DALKNVPGVGAFFAGENGNSttgdaIYMRGADTSNSI------YIDGIRDIGSVSRDTFNTEQVEVIKGPSGTDYGRSAP 166
Cdd:PRK10003 100 EVMENTLGISKSQADSDRAL-----YYSRGFQIDNYMvdgiptYFESRWNLGDALSDTALFERVEVVRGATGLMTGTGNP 174
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   167 TGSINMISKQP--RNDSGiDASASIGSAWFRRGTLDVNQVIGDTTAVRLNVM-GEKTHDAGRDKVKNERYGVAPSVAFGL 243
Cdd:PRK10003 175 SAAINMVRKHAtsREFKG-DVSAEYGSWNKQRYVADLQSPLTEDGKVRARIVaGYQNNDSWLDRYNSEKTFFSGIVDADL 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   244 GTANRLYLNY-LHVTQHNTPD-GGIPTIglpgYSAPSAGTAALNHSGKVDthnfYGTDSDYDDSTTDTATMRFehdiNDN 321
Cdd:PRK10003 254 GDLTTLSAGYeYQRIDVNSPTwGGLPRW----NTDGSSNSYDRARSTAPD----WAYNDKEINKVFMTLKQRF----ADT 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   322 TTIRNTTRWSRVKQDYLMT-----------AIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTfytgsi 390
Cdd:PRK10003 322 WQATLNATHSEVEFDSKMMyvdayvdkatgMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYELFGR------ 395
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   391 GHDVSTGVEFTRETQTNYGVNPVTLPAV--NIYHPDSSIHPgglTRNGANANGQTDTF---AIYAFDTLQITRDFELNGG 465
Cdd:PRK10003 396 QHNLMFGGSYSKQNNRYFSSWANIFPDEigSFYNFNGNFPQ---TDWSPQSLAQDDTThmkSLYAATRVSLADPLHLILG 472
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   466 IRldnyHTEYDSATACGGSGRGAITcptgvakgsPVttvdtaksgnlmnwkAGALYHLTENGNVYINYAVSQQPPGGNNf 545
Cdd:PRK10003 473 AR----YTNWRVDTLTYSMEKNHTT---------PY---------------AGLVYDINDNWSTYASYTSIFQPQNDRD- 523
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   546 alaqsgsgnsANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENeVEQND----DGTYSQYGKKRVEG-----Y 616
Cdd:PRK10003 524 ----------SSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDN-VAQSTgtpiPGSNGETAYKAVDGtvskgV 592
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   617 EISVAGNITPAWQVIGGYTQQKATikngkdvAQDGSSSLPYTPEHAFTLWSQYQ--ATDDISVGAGARYIGSMHKGSDGA 694
Cdd:PRK10003 593 EFELNGAITDNWQLTFGATRYIAE-------DNEGNAVNPNLPRTTVKLFTRYRlpVMPELTVGGGVNWQNRVYTDTVTP 665
                        730       740       750       760       770       780
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 3915413   695 VGTPAFTEG-YWVADAKLGYRVNRNLDFQLNVYNLFDTDYvaSINKSGYRYHpGEPRTFLLTANMHF 760
Cdd:PRK10003 666 YGTFRAEQGsYALVDLFTRYQVTKNFSVQGNVNNLFDKTY--DTNVEGSIVY-GAPRNFSITATYQF 729
PRK13484 PRK13484
IreA family TonB-dependent siderophore receptor;
24-730 1.70e-20

IreA family TonB-dependent siderophore receptor;


Pssm-ID: 139605 [Multi-domain]  Cd Length: 682  Bit Score: 96.61  E-value: 1.70e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    24 GITPVAQALAAEGQTNAD---DTLVVEASTpslYAPQQSADPKfsrpvadttrTMTVISEQVIKDQGATNLTDALKNVPG 100
Cdd:PRK13484  10 GIAVMCSAVISSGYASSDkkeDTLVVTASG---FTQQLRNAPA----------SVSVITSEQLQKKPVSDLVDAVKDVEG 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   101 VGAffageNGNSTTGDaIYMRGADTSNS-IYIDGIRDIGSVSRDTFN-------------TEQVEVIKGPSGTDYGRSAP 166
Cdd:PRK13484  77 ISI-----TGGNEKPD-ISIRGLSGDYTlILVDGRRQSGRESRPNGSggfeagfippveaIERIEVIRGPMSSLYGSDAI 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   167 TGSINMISKqPRNDSGIDASASIGsawfrrGTLDVNQVIGDTTavrlnvmgekthdagrdkvKNERYGVAPSVAFGLGTa 246
Cdd:PRK13484 151 GGVINIITK-PVNNQTWDGVLGLG------GIIQEHGKFGNST-------------------TNDFYLSGPLIKDKLGL- 203
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   247 nRLYlnylhvtqhntpdGGIptiGLPGYSAPSAGTAALNHSGKVDTHNFygtdsdyddstTDTATMRFEHDINDNTTIRN 326
Cdd:PRK13484 204 -QLY-------------GGM---NYRKEDSISQGTPAKDNKNITATLQF-----------TPTESQKFVFEYGKNNQVHT 255
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   327 TTRWSRVKQdYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILTNQTNLTSTFYTGsiGHDVSTGVEFTRETQT 406
Cdd:PRK13484 256 LTPGESLDA-WTMRGNLKQPNSKRETHNSRSHWVAAWNAQGEILHPEIAVYQEKVIREVKSG--KKDKYNHWDLNYESRK 332
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   407 NYGVNPVTLPAVNIYHPDSSIHPGGL-----TRNGANANGQT--------DTFAIYAFDTLQITRDFELNGGIRLDNyHT 473
Cdd:PRK13484 333 PEITNTIIDAKVTAFLPENVLTIGGQfqhaeLRDDSATGKKTtetqsvsiKQKAVFIENEYAATDSLALTGGLRLDN-HE 411
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   474 EYdsatacggsgrgaitcptgvakgspvttvdtaksGNLMNWKAGALYHLTENGNVYINYAVSQQPPGGNNFA-----LA 548
Cdd:PRK13484 412 IY----------------------------------GSYWNPRLYAVYNLTDNLTLKGGIAKAFRAPSIREVSpgfgtLT 457
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   549 QSGSGNSANRTDFKPQKANTSEIGTKWQVlDKRLLLTAALFRTDIENEVEQNDDGT-----------YSQYGKKRVEGYE 617
Cdd:PRK13484 458 QGGASIMYGNRDLKPETSVTEEIGIIYSN-DSGFSASATLFNTDFKNKLTSYDIGTkdpvtglntfiYDNVGEANIRGVE 536
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   618 ISVAGNITPAWQVIGGYTQQKATIKNgKDVAQDGSS----SLPYTPEHAFTLWSQYQATDDISVGAGARYIGSM--HKGS 691
Cdd:PRK13484 537 LATQIPVYDKWHVSANYTFTDSRRKS-DDESLNGKSlkgePLERTPRHAANAKLEWDYTQDITFYSSLNYTGKQiwAAQR 615
                        730       740       750
                 ....*....|....*....|....*....|....*....
gi 3915413   692 DGAVGtPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFD 730
Cdd:PRK13484 616 NGAKV-PRVRNGFTSMDIGLNYQILPDTLINFAVLNVTD 653
PRK13483 PRK13483
ligand-gated channel protein;
19-744 1.26e-19

ligand-gated channel protein;


Pssm-ID: 184080 [Multi-domain]  Cd Length: 660  Bit Score: 93.69  E-value: 1.26e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    19 AGLC-IGITPVAQALAAEGQTNADDTLVVEASTpslyapqqsadpkFSRPVADTTRTMTVISEQVIKDQGATNLTDALKN 97
Cdd:PRK13483  10 SALClLPAVFVTHALAQAAPDKTMETVVVTASG-------------YEQQIRDAPASISVITREDLENRFYRDLTDALLD 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    98 VPGVGAffageNGNSTTGDaIYMRGADTSNS-IYIDGIRDIGSVSR---DTFNTEQ-----------VEVIKGPSGTDYG 162
Cdd:PRK13483  77 VPGVVV-----TGGGDRTD-ISLRGMGSQYTlILVDGKRQSSRETRpnsDGPGVEQawtpplaaierIEVIRGPMSSLYG 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   163 RSAPTGSINMISK----------------QPRNDSGIDASASigsaWFRRGTLDVN----QVIGDTTAvrlnvMGEKTHD 222
Cdd:PRK13483 151 SDAIGGVINIITRkvpnewqgevrldttlQENSDSGNVYQAN----FFVNGPLIKDllglQLYGQYTQ-----REEDDIE 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   223 AG-RDKVKNE---RYGVAPS----VAFGLGTANRLYLNYLHVTQHNTPdggiptiglPGYSAPSAGTAALNHSgkvdthn 294
Cdd:PRK13483 222 GGyRDKDARSltaKLALTPNedhdIMLEVGTSNQERDSTVGKTVAPLA---------PGESCGRRGCPESSTT------- 285
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   295 fygtdsdyddsttdtatmrfEHDiNDNTTIRNTTRWSRVKQDylmtaimggaSNITQPTSDVNSwtwsrtantKDVSNKI 374
Cdd:PRK13483 286 --------------------EYE-RSTVSLSHTGRWDFGTSD----------TYIQHEEFDNKS---------REMKIKN 325
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   375 LTNQTNLTSTFytgSIGHDVSTGVEFTRETQTNYGVNPVTlpavniyhpdssihpgglTRNGANaNGQtdtFAIYAFDTL 454
Cdd:PRK13483 326 TDFQSSLVAPL---GQEHTLTFGAAYNHQDLTDETSNQIS------------------DLTDIS-RTQ---WAVFSEDEW 380
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   455 QITRDFELNGGIRLD---NYHTEYdsatacggSGRgaitcPTGVAKGSPVTTVdtaKSGNLMNWKAGALYHLTEN-GNVy 530
Cdd:PRK13483 381 RIADDFALTGGLRLDhdeNFGGHV--------SPR-----VYGVWNLAPSWTV---KGGVSTGFRAPSLRQTTPDwGQV- 443
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   531 inyavsqqppggnnfalaqSGSGNSANRTDFKPQKANTSEIGTKWQvLDKRLLLTAALFRTDIENEVE-------QNDDG 603
Cdd:PRK13483 444 -------------------SRGGNIYGNPDLKPETSLNKELGLYYD-LGSGLTASLTVFYNEFKDKITrvacpatQCTDG 503
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   604 ---------TYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGkdvaQDGSSSLPYTPEHAFTLWSQYQATDD 674
Cdd:PRK13483 504 pnqfgadptTYVNIDEAVTQGVEASLSYPITSTLSLSGNYTYTDSEQKSG----AYKGSPLNQLPKHLFQASLNWEPTDR 579
                        730       740       750       760       770       780       790
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   675 ISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLNVYNLFDTDyvasINKSGYRY 744
Cdd:PRK13483 580 LNSWARVNYRGEESQPTTGPSSSSFIAPSYTFLDLGANYQLTDNLKLSAGIYNLFDKE----INYEEYGY 645
PRK13513 PRK13513
ligand-gated channel protein;
12-752 5.57e-17

ligand-gated channel protein;


Pssm-ID: 184104 [Multi-domain]  Cd Length: 659  Bit Score: 85.20  E-value: 5.57e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    12 FHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEAStpslyapqqsadpKFSRPVADTTRTMTVISEQVIKDQGATNL 91
Cdd:PRK13513   6 RKTHKAALVIAAAISSQAYAAEKTNTATPTDTMVVTAS-------------GFQQRIQDAPASISVVTREQLENKAYRDV 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    92 TDALKNVPGVGAffageNGNSTTGDaIYMRGADTSNS-IYIDGIRdIGSVS----RDTFNTEQ-----------VEVIKG 155
Cdd:PRK13513  73 TDALKDVPGVVV-----TGGGSTSD-ISIRGMAAKYTlILVDGKR-VDTRStrpnSDGSGIEQgwlpplaaierIEVVRG 145
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   156 PSGTDYGRSAPTGSINMISKQprndsgidasasIGSAWfrRGTLDvnqviGDTTAvrlnvmgEKTHDAGrDKVKNERYGV 235
Cdd:PRK13513 146 PMSSLYGSDAMGGVINIITRK------------VQKEW--HGSLR-----ADATL-------QEDSKSG-DIFQTNAYAS 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   236 APSVAFGLGTanRLYLNYLHVTQHNTPDggiptiglpGYSAPSAGTAALNHSGKVDTHNfygtdsdyddsttdtatmRFE 315
Cdd:PRK13513 199 GPLIDGLLGL--KVSGLLSHRSEDKIID---------GYNEQRMRNGTATFSLTPDDNN------------------EFD 249
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   316 HDINDNTTIRNTT-------RWSRVKQDYLMT--AIM------GGASN-------ITQPTSDVNSWtwsrtantkdvsNK 373
Cdd:PRK13513 250 FEIGRYVQDRNSTpgrtlalNGTNSDTQYDRNnyAIThngyydFGNSTsyiqrdeTRNPSRQMKSV------------DT 317
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   374 ILTNQTnltsTFYTGSigHDVSTGVEFTREtqtnygvnpvtlpavniyhpdsSIHPGGLTRNGANANGQTD--TFAIYAF 451
Cdd:PRK13513 318 IFNTQT----SFLLDD--HTLSLGGQYRYE----------------------ELYDKGNQLPSASDLNKLTrwSWALFAE 369
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   452 DTLQITRDFELNGGIRLD---NYHTEYdsatacggSGRGaitcpTGVAKGSPVTTVdtaKSGNLMNWKAGALYHLTENGn 528
Cdd:PRK13513 370 DEWQMTNDFALTGGIRMDqdqNYGTHW--------TPRL-----YGVWHLADQWTL---KGGVSTGYRSPDLRQATDNW- 432
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   529 vyinyavSQQPPGGNNFALAqsgSGNSanrtDFKPQKANTSEIGTKWQVLDKrLLLTAALFRTDIEN---EVEQNDDG-- 603
Cdd:PRK13513 433 -------GQLTGGGGLPALI---LGNS----DLKPEKSISQEIGILWDNQEN-LNASVTLFNTDFKDkitEVRNCDTTnt 497
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   604 ---------TYS------QYGKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQdgssSLPYTPEHAFTLWSQ 668
Cdd:PRK13513 498 dgqcvfngiNYDfisdriNVDKANMRGVEATFNWDINQAWSLATNYTFTQSEQKSGAFAGQ----PLNQMPKHMANATLN 573
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   669 YQATDDISVGAGARYIGsmhKGSDG------AVGTPAFTegywVADAKLGYRVNRNLDFQLNVYNLFDTDYVASINKS-- 740
Cdd:PRK13513 574 WQTTEDFATWIRINYRG---KTSEYlnrtsmGSGTPSYT----FVDLGASYQLTKELRLMGGVYNLLDKRVDIDVNDKvl 646
                        810
                 ....*....|...
gi 3915413   741 -GYRYHPGEPRTF 752
Cdd:PRK13513 647 dGRRYMVGASYDF 659
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
20-744 7.97e-15

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 78.39  E-value: 7.97e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    20 GLCIgiTPVAQALAAEGQTNADDTLVVEAStpslyAPQQSadpkfsrpVADTTRTMTVISEQVIKDQGATNLTDALKNVP 99
Cdd:PRK10064  11 GLCA--SAISCAWPVLAVDDDGETMVVTAS-----AVEQN--------LKDAPASISVITQEDLQRKPVQNLKDVLKEVP 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   100 GVGafFAGENGNSTTgdaIYMRGADTSNS-IYIDGIR-------------DIGSVSRDTFntEQVEVIKGPSGTDYGRSA 165
Cdd:PRK10064  76 GVQ--LTNEGDNRKG---VSIRGLDSSYTlILIDGKRvnsrnavfrhndfDLNWIPVDAI--ERIEVVRGPMSSLYGSDA 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   166 PTGSINMISKQprndsgidasasIGSAWfrRGTLDVNQVIgdttavrlnvmgeKTHDAGRDKVKNERYGVAPSV--AFGL 243
Cdd:PRK10064 149 LGGVVNIITKK------------IGQKW--HGTVTVDTTI-------------QEHRDRGDTYNGQFFTSGPLIdgVLGM 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   244 GTANRLYLNYLHVTQHNTPDGGIPTIGLPGYSApSAGTAALNHSGKvDTHNF---YGTDsdyddsttdtatmRFEHDIND 320
Cdd:PRK10064 202 KAYGSLAKREKDDPQNSTTTDTGETPRIEGFTS-RDGNVEFAWTPN-QNHDFtagYGFD-------------RQDRDSDS 266
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   321 ---------NTTIRNTTRWSRvkqdylmtaimgGASNITQPTSDVNSWTWSRTANTKDVSNKIltnqtNLTSTFYTGSIG 391
Cdd:PRK10064 267 ldknrlerqNYSLSHNGRWDY------------GNSELKYYGEKVENKNPGNSSPITSESNSI-----DGKYTLPLTAIN 329
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   392 HDVSTGVEFTRETQTnygvNPVTLPAvniyhpdssihpggltrnGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDNY 471
Cdd:PRK10064 330 QFLTFGGEWRHDKLS----DAVNLTG------------------GTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDH 387
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   472 HTEYDSATacggsgrgaitcPTGVAKGSPVTTVdTAKSGNLMNWKAGALYHLTENGnvyinyavsqqppggnnfalaQSG 551
Cdd:PRK10064 388 ETYGDHWS------------PRAYLVYNATDTV-TVKGGWATAFKAPSLLQLSPDW---------------------TSN 433
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   552 SGNSANRT----DFKPQKANTSEIGTKWQVLDKRLLLTAA---LFRTDIENEV------EQNDDGTYSQY---------- 608
Cdd:PRK10064 434 SCRGACKIvgspDLKPETSESWELGLYYMGEEGWLEGVESsvtVFRNDVDDRIsisrtsDVNAAPGYQNFvgfetngrgr 513
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   609 ----------GKKRVEGYEISVAGNITPAWQVIGGYTQQkatikNGKDVAQDGSSSLPYTPEHA--FTLWSQYQATDDIS 676
Cdd:PRK10064 514 rvpvfryynvNKARIQGVETELKIPFNDEWKLSLNYTYN-----DGRDVSNGENKPLSDLPFHTanGTLDWKPLALEDWS 588
                        730       740       750       760       770       780       790
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3915413   677 VGAGARYIGSMHKGSDGAVgTPAfteGYWVADAKLGYRVNRNLDFQLNVYNLFDTDYVA---SINKSGYRY 744
Cdd:PRK10064 589 FYVSGNYTGQKRADSATAK-TPG---GYTIWNTGAAWQVTKDVKLRAGVLNLGDKDLSRddySYNEDGRRY 655
PRK13524 PRK13524
FepA family TonB-dependent siderophore receptor;
10-760 1.33e-11

FepA family TonB-dependent siderophore receptor;


Pssm-ID: 237410 [Multi-domain]  Cd Length: 744  Bit Score: 68.13  E-value: 1.33e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    10 RQFHSLTFFAGLciGITPVAQALAAEGQTNAD------DTLVVEASTPSLYAPQQSadpkfsrpvadttrtmtVISEQVI 83
Cdd:PRK13524   3 KKIHSLALLVNL--GIYGVAQAAEAEDAKTDDtpasheDTIVVTAAEQNLQAPGVS-----------------TITAEDI 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    84 KDQGATN-LTDALKNVPGVGAffageNGNSTTGD-----AIYMRGADTSNS-IYIDG--IRDIGSV------SRDTFN-- 146
Cdd:PRK13524  64 RKRPPANdVSEIIRTMPGVNL-----TGNSTSGQrgnnrQIDIRGMGPENTlILIDGkpVSSRNSVrygwrgERDTRGdt 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   147 -------TEQVEVIKGPSGTDYGRSAPTGSINMISKQPRND--------SGIDASASIGSAW---------------FR- 195
Cdd:PRK13524 139 nwvppemIERIEVLRGPAAARYGNGAAGGVVNIITKKPTGEwhgswntyFNAPEHKAEGATKrtnfslsgplgdelsFRl 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   196 RGTL--------DVNQviGDTTAVRLNVMGekTHDAGRDKVKNE------RYGVAP--SVAFGLGTANRLYLnYLHVTQH 259
Cdd:PRK13524 219 YGNLnktqadawDINQ--GHQSARTGSYAG--TLPAGREGVINKdingllRWDFAPlqSLELEAGYSRQGNL-YAGDTQN 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   260 NTPDG------GIPTIGLPGYsapsagTAALNHSGKVDthnfygtdsdyddsttdtatmrfehdinDNTTIRNTTRWSRV 333
Cdd:PRK13524 294 TNSDAlvkslyGKETNRMYRQ------NYALTHRGGWD----------------------------NGVSTSNYAQYEHT 339
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   334 KQDYLMTAIMGGASNITQPTSDvnswTWSrtanTKDVSNKILTNQTNLtstFYTGSIGHDVSTGVEFTRETQTNYGVNPV 413
Cdd:PRK13524 340 RNSRLPEGLAGGTEGIFNEKAT----QFS----TIDLDDVMLHSEVNL---PFDLLVNQTLTLGTEWNQQRMKDPSSNTQ 408
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   414 TLPAvniyhpDSSIhpGGLTRNGANANGQTDTFAIYAFDTLQITRDFELNGGIRLDnYHTEYDSATacggsgrgaitcpt 493
Cdd:PRK13524 409 ALTS------GGAI--PGVSATGRSPYSKAEIFSLFAEDNMELTDSTMLTPGLRFD-HHSIVGNNW-------------- 465
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   494 gvakgSPVTTVD-------TAKSGNLMNWKAGALYHLTENgnvYINYAVSQQPPGGNNFALAQSGSGnsanrtDFKPQKA 566
Cdd:PRK13524 466 -----SPSLNLSqglgddfTLKMGIARAYKAPNLYQTNPN---YILYSKGQGCYASAGNGCYLQGND------DLKAETS 531
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   567 NTSEIGTKWqvldKRLLLTAAL--FRTDIENEVE-------QNDDGTYSQY-----GKKRVEGYE----ISVAGNITpaW 628
Cdd:PRK13524 532 VNKEIGLEF----KRDGWLAGLtwFRNDYRNKIEagyvpvgTNSVGKTDIYqwenvPKAVVEGLEgtlnVPVSETVN--W 605
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   629 QVIGGYTQQKATIKNGKdvaqdgssSLPYTPEhaFTLWS--QYQATDDISVGAGARYIGSM------HKGSDGAVGTPAF 700
Cdd:PRK13524 606 TNNLTYMLQSKNKTTGD--------PLSIIPE--YTLNStlSWQATEDLSLQSTFTWYGKQkpkkynYKGQPVTGSATKE 675
                        810       820       830       840       850       860       870
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 3915413   701 TEGYWVADAKLGYRVNRNLDFQLNVYNLFD---------TDYVASINKSG-YRYH-PGepRTFLLTANMHF 760
Cdd:PRK13524 676 VSPYSIVGLSATYDVTKNVSLTGGVDNLFDkrlwregnaQTTGDLIAGAGaYTYNePG--RTYYMSLNTHF 744
btuB PRK10641
TonB-dependent vitamin B12 receptor BtuB;
31-237 5.99e-11

TonB-dependent vitamin B12 receptor BtuB;


Pssm-ID: 236730 [Multi-domain]  Cd Length: 614  Bit Score: 65.78  E-value: 5.99e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    31 ALAAEGQTNADDTLVVEAStpslyapqqsadpKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGVGAffaGENG 110
Cdd:PRK10641  15 AFSGWAQDTSPDTLVVTAN-------------RFQQPVSTVLAPTTVVTRDDIDRWQSKSVNDVLRRLPGVDI---AQNG 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   111 NSTTGDAIYMRGADTSNS-IYIDGIR-----DIGSVSRDTFNT---EQVEVIKGPSGTDYGRSAPTGSINMISKqpRNDS 181
Cdd:PRK10641  79 GLGQLSSLFIRGTNSSHVlVLIDGVRlnqagISGSADLSQIPIslvQRIEYIRGPRSAVYGSDAIGGVVNIITT--RDKP 156
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 3915413   182 GIDASASIGSAWFRRGTLDVNQVIGDTTavRLNVMGEKTHDAGRDKVKNERYGVAP 237
Cdd:PRK10641 157 GTTLSAGWGSNGYQNYDGSTQQQLGDNT--RVTLAGDYTYTKGFDVVAYGNTGTQA 210
PRK13486 PRK13486
TonB-dependent receptor;
22-733 4.12e-10

TonB-dependent receptor;


Pssm-ID: 139606 [Multi-domain]  Cd Length: 696  Bit Score: 63.12  E-value: 4.12e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    22 CIGITPVAQAlaaegqtNADDTLVVEAStpslyapqqsadpKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPGV 101
Cdd:PRK13486  13 CLGFSASSIA-------AAEDVMIVSAS-------------GYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEGV 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   102 GAffagENGNSTTGD-AIYMRGADTSNS-IYIDGIRDIGS--VSRDTF---NT---------EQVEVIKGPSGTDYGRSA 165
Cdd:PRK13486  73 DV----ESGTGKTGGlEISIRGMPASYTlILIDGVRQGGSsdVTPNGFsamNTgfmpplaaiERIEVIRGPMSTLYGSDA 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   166 PTGSINMISKQPRNDsgidasasigsaWfrrgtldvnqvigdTTAVrlnvmgekthDAGRDKVKNERYGVAPSVAF---G 242
Cdd:PRK13486 149 MGGVVNIITRKNADK------------W--------------LSSV----------NAGLNLQESNKWGNSSQFNFwssG 192
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   243 LGTANRLYLNYLHVTQHNTpdggiptiglpGYSAPS-AGTAALNHSGKVDTHNFygtdsdyddsttdTATMRFEHDINDN 321
Cdd:PRK13486 193 PLVDDSVSLQVRGSTQQRQ-----------GSSVTSlSDTAATRIPYPTESQNY-------------NLGARLDWKASEQ 248
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   322 TTI---RNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSW---------TWSRTANTKDVSNKILTNQTNLTSTFYTGS 389
Cdd:PRK13486 249 DVLwfdMDTTRQRYDNRDGQLGSLTGGYDRTLRYERNKISAgydhtftfgTWKSYLNWNETENKGRELVRSVLKRDKWGL 328
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   390 IGHDvstgveftRE-TQTNYGVNPVTLPAVNIYHpdsSIHPGGLTRNGANANG----------QTDTFAIYAFDTLQITR 458
Cdd:PRK13486 329 AGQP--------RElKESNLILNSLLLTPLGESH---LVTVGGEFQSSSMKDGvvlastgetfRQKSWSVFAEDEWHLTD 397
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   459 DFELNGGIRldnyhteYDSATACGG--SGRGAITCptgvakgsPVTTVDTAKSGNLMNWKAGALYHLTENGNvyinyAVS 536
Cdd:PRK13486 398 ALALTAGSR-------YEHHEQFGGhfSPRAYLVW--------DVADAWTLKGGVTTGYKAPRMGQLHKGIS-----GVS 457
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   537 QQppggnnfalaqsGSGNSANRTDFKPQKANTSEIGTKWqvlDKRLLLTAAL--FRTDIENEVEQN--DDGT--YSQYGK 610
Cdd:PRK13486 458 GQ------------GKTNLLGNPDLKPEESVSYEAGVYY---DNPAGLNANVtgFMTDFSNKIVSYsiNDNTnsYVNSGK 522
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   611 KRVEGYEIsvAGNItPAW----QVIGGYTQQKATIKNGkdvaQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGS 686
Cdd:PRK13486 523 ARLHGVEF--AGTL-PLWsedvTLSLNYTWTRSEQRDG----DNKGAPLSYTPEHMVNAKLNWQITEEVASWLGARYRGK 595
                        730       740       750       760       770       780
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 3915413   687 mhkgsdgavgTPAFTEGY--------------------W-VADAKLGYRVNRNLDFQLNVYNLFDTDY 733
Cdd:PRK13486 596 ----------TPRFTQNYsslsavqkkvydekgeylkaWtVVDAGLSWKMTDALTLNAAVNNLLNKDY 653
PRK13528 PRK13528
outer membrane receptor FepA; Provisional
8-760 4.45e-09

outer membrane receptor FepA; Provisional


Pssm-ID: 237413 [Multi-domain]  Cd Length: 727  Bit Score: 59.77  E-value: 4.45e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413     8 PARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTLVVEAsTPSLYAPQQsadPKFSrpvadttrtmtVISEQVIKDQG 87
Cdd:PRK13528   1 MGMRVNKILWLLTVLLVGLNSPVSAAESSDDDNGETMVVEA-TAEQELKQQ---PGVS-----------IITAEDIKKRP 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413    88 ATN-LTDALKNVPGVGAffageNGNSTTGD-----AIYMRGADTSNS-IYIDG--------IRDIGSVSRDTFN------ 146
Cdd:PRK13528  66 PVNdLSDIIRKMPGVNL-----TGNSASGTrgnnrQIDIRGMGPENTlILIDGvpvtsrnsVRYSWRGERDTRGdtnwvp 140
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   147 ---TEQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDsgidasasigsaWFRRGTLDVNQ-------------------V 204
Cdd:PRK13528 141 pemVERIEVIRGPAAARYGSGAAGGVVNIITKRPTND------------WHGSLSLYTNQpesskegatrranfslsgpL 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   205 IGDTTAVRLNVMGEKTHD--------------AGRDKVKNEryGVAPSVAFGLGTANRLYLNYLHVTQHNTPDGGIPtig 270
Cdd:PRK13528 209 AGDALTMRLYGNLNKTDAdswdinssagtknaAGREGVRNK--DINGVLSWKMTPQQILDFEAGYSRQGNIYAGDTQ--- 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   271 lpgYSAPSAGTAALNHSGKvDTHNFYGTDSDyddsttdtatmrFEHD-INDNTTIRNTTRWSRVKQDYLMTAIMGG---- 345
Cdd:PRK13528 284 ---NSNSSAVTESLAKSGK-ETNRLYRQNYG------------LTHNgIWDWGQSRLGFYYEKTNNTRMNEGLAGGgegr 347
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   346 -ASNITQPTSDVNSWtwsRTANTKDVSNKILTNQTnltstfytgsighdVSTGVEFTRET-----QTNYGVNPVTLPAVn 419
Cdd:PRK13528 348 iTADQTFTTSRLESY---RTSGELNVPLNWLFEQT--------------LTVGAEWNRDElndpsSTSLTVKDGDIGGI- 409
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   420 iyhpdsSIHPGGltRNGANANgqtDTFAIYAFDTLQITRDFELNGGIRLDnYHTEYdsatacGGSgrgaitcptgvakGS 499
Cdd:PRK13528 410 ------SGSAAD--RSSKNKS---EISALYVEDNIEPVPGTNLIPGLRFD-YHSEF------GSN-------------WS 458
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   500 P-------VTTVDTAKSGNLMNWKAGALYHLTENgnvYINYAVSQQPPGGNNfalaqSGSGNSANRTDFKPQKANTSEIG 572
Cdd:PRK13528 459 PslnlsqeLGDYFKVKAGIARAFKAPNLYQSSEG---YLLYSRGNGCPKDIT-----SGGCYLVGNKNLDPEISVNKEIG 530
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   573 TKWQVLDKRLLLTaaLFRTDIENEVEQNDD-------GTY----SQYGKKRVEGYEISVAGNITPA---WQVIGGYTQQK 638
Cdd:PRK13528 531 LEFTVDDYHASVT--YFRNDYQNKIVAGDDvigrtasGAYilqwQNGGKAVVEGLEGNLLVPLMKDrlnWNTNATYMITS 608
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3915413   639 ATIKNGkdvaqdgsSSLPYTPEHAFTLWSQYQATDDISVGAGARYIGSmHKGSDGAVGTPAFTEG--------YWVADAK 710
Cdd:PRK13528 609 EQKDTG--------NPLSVIPKYTINSTLDWQITQALSANVNWTLYGK-QKPRTHAESRSEETGGlsgkelgaYSLVGVN 679
                        810       820       830       840       850
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 3915413   711 LGYRVNRNLDFQLNVYNLFDtdyvasinKSGYRYHPG-----EP-RTFLLTANMHF 760
Cdd:PRK13528 680 VNYDINKNLRLNVGVSNLFD--------KQIYREGEGantynEPgRAYYAGVTASF 727
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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