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Conserved domains on  [gi|1240241089|gb|PAV24485|]
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DUF2559 domain-containing protein [Tamilnaduibacter salinus]

Protein Classification

YhfG family protein( domain architecture ID 10566788)

YhfG family protein is a DUF2559 domain-containing protein; similar to Escherichia coli protein YhfG

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2559 pfam10832
Protein of unknown function (DUF2559); This family of proteins appear to be restricted to ...
 2-51 1.39e-09

Protein of unknown function (DUF2559); This family of proteins appear to be restricted to Enterobacteriaceae. The sequences are annotated as yhfG however currently no function is known.


:

Pssm-ID: 431516  Cd Length: 54  Bit Score: 47.72  E-value: 1.39e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1240241089  2 ASSSLEAKRAYFAKTRRANYAASLRLEGFDV----KSGDVKYASRRAAVRAHRK 51
Cdd:pfam10832  1 TKLTLKQKKRYFAKTRNANYQASLRLEGLDIplvtLSAEQAAQRLEALRRHYER 54
 
Name Accession Description Interval E-value
DUF2559 pfam10832
Protein of unknown function (DUF2559); This family of proteins appear to be restricted to ...
 2-51 1.39e-09

Protein of unknown function (DUF2559); This family of proteins appear to be restricted to Enterobacteriaceae. The sequences are annotated as yhfG however currently no function is known.


Pssm-ID: 431516  Cd Length: 54  Bit Score: 47.72  E-value: 1.39e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1240241089  2 ASSSLEAKRAYFAKTRRANYAASLRLEGFDV----KSGDVKYASRRAAVRAHRK 51
Cdd:pfam10832  1 TKLTLKQKKRYFAKTRNANYQASLRLEGLDIplvtLSAEQAAQRLEALRRHYER 54
 
Name Accession Description Interval E-value
DUF2559 pfam10832
Protein of unknown function (DUF2559); This family of proteins appear to be restricted to ...
 2-51 1.39e-09

Protein of unknown function (DUF2559); This family of proteins appear to be restricted to Enterobacteriaceae. The sequences are annotated as yhfG however currently no function is known.


Pssm-ID: 431516  Cd Length: 54  Bit Score: 47.72  E-value: 1.39e-09
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1240241089  2 ASSSLEAKRAYFAKTRRANYAASLRLEGFDV----KSGDVKYASRRAAVRAHRK 51
Cdd:pfam10832  1 TKLTLKQKKRYFAKTRNANYQASLRLEGLDIplvtLSAEQAAQRLEALRRHYER 54
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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