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Concise Results
Standard Results
Full Results
peptidoglycan glycosyltransferase FtsI [Shigella boydii]
Protein Classification
peptidoglycan glycosyltransferase FtsI ( domain architecture ID 11487651 )
peptidoglycan glycosyltransferase FtsI is an essential cell division protein that catalyzes cross-linking of the peptidoglycan cell wall at the division septum
List of domain hits
Name
Accession
Description
Interval
E-value
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
2-579
0e+00
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 1272.06
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 2 KAAAKTQK P KRQEE H ANFISWRFALLCGCILLAL A FLLGRVAWLQVI S PDMLV K EGDMRSLRVQ Q VSTSRGMITDRSGRP 81
Cdd:PRK15105 1 KAAAKTQK L KRQEE Q ANFISWRFALLCGCILLAL V FLLGRVAWLQVI N PDMLV R EGDMRSLRVQ E VSTSRGMITDRSGRP 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 82 LAVSVPVKAIWADPKEVHDAGGISV G DRWKALA N ALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 161
Cdd:PRK15105 81 LAVSVPVKAIWADPKEVHDAGGISV D DRWKALA D ALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 162 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDE H LQ 241
Cdd:PRK15105 161 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDE R LQ 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 242 ALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPK E AMRNR T ITDVFEPGSTVKPMVVMTALQRG 321
Cdd:PRK15105 241 ALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPK D AMRNR A ITDVFEPGSTVKPMVVMTALQRG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 322 VV R ENSVLNT I PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 401
Cdd:PRK15105 321 VV K ENSVLNT V PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 402 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 481
Cdd:PRK15105 401 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 482 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 561
Cdd:PRK15105 481 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 560
570
....*....|....*...
gi 1241331358 562 NIEPDAL T TGDKNEFVIN 579
Cdd:PRK15105 561 NIEPDAL P TGDKNEFVIN 578
Name
Accession
Description
Interval
E-value
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
2-579
0e+00
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 1272.06
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 2 KAAAKTQK P KRQEE H ANFISWRFALLCGCILLAL A FLLGRVAWLQVI S PDMLV K EGDMRSLRVQ Q VSTSRGMITDRSGRP 81
Cdd:PRK15105 1 KAAAKTQK L KRQEE Q ANFISWRFALLCGCILLAL V FLLGRVAWLQVI N PDMLV R EGDMRSLRVQ E VSTSRGMITDRSGRP 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 82 LAVSVPVKAIWADPKEVHDAGGISV G DRWKALA N ALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 161
Cdd:PRK15105 81 LAVSVPVKAIWADPKEVHDAGGISV D DRWKALA D ALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 162 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDE H LQ 241
Cdd:PRK15105 161 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDE R LQ 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 242 ALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPK E AMRNR T ITDVFEPGSTVKPMVVMTALQRG 321
Cdd:PRK15105 241 ALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPK D AMRNR A ITDVFEPGSTVKPMVVMTALQRG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 322 VV R ENSVLNT I PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 401
Cdd:PRK15105 321 VV K ENSVLNT V PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 402 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 481
Cdd:PRK15105 401 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 482 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 561
Cdd:PRK15105 481 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 560
570
....*....|....*...
gi 1241331358 562 NIEPDAL T TGDKNEFVIN 579
Cdd:PRK15105 561 NIEPDAL P TGDKNEFVIN 578
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
17-562
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 621.07
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 17 ANFISW R FA LL CGCI LL ALAF L L GR VAW LQV ISP D MLVKEGDMRSL R VQQVSTS RG M I T DR S G RP LA VS VPV KAIW ADP K 96
Cdd:COG0768 7 KRLFRR R LL LL FLLV LL LFLL L V GR LFY LQV VEG D EYAELAEENRI R TVPIPAP RG L I Y DR N G NV LA TN VPV YSLY ADP E 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 97 EV H D aggis VGDRWKA LA NA L NIPLDQ L SARINAN p KGRFI YL A R QVN P DM A DY I KK LKLPG IHLRE E SR RYYP S GE VT A 176
Cdd:COG0768 87 EV K D ----- PEETAEK LA KL L GLDPEE L RKKLKKK - SRFPV YL K R NLS P EE A AR I RA LKLPG VYVEA E YK RYYP Y GE LA A 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 177 H LI G FTNV ---- D SQ G IE G V EK SFDKW L T G Q PG E R I V RK D RY GRVI E D ISS - TDSQAAHN L A L S ID EH LQ ALVYRE L NN A 251
Cdd:COG0768 161 H VL G YVGE ingg D GI G KS G L EK AYEDL L R G T PG K R R V EV D AR GRVI R D LGE e KPPVPGKD L V L T ID SD LQ KIAEEA L KK A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 252 V AFN KA E SG SA V LV D VN TGE V LAMA NS PS YN PN NLS G T P K E AM RNR TITDVF EPGST V KP MVVMT AL QR GV VRENSVLN - 330
Cdd:COG0768 241 V EEY KA K SG AV V VM D PK TGE I LAMA SY PS FD PN LFV G G P D E PL RNR AVQGTY EPGST F KP FTAAA AL EE GV ITPDTTFD c 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 331 TIP YR IN G HE I K D -- VARYSE LTLT GV L Q KSSNVG VS KLAL AMPSSA L V D TYSR FGLG KA T NLG L V GE R SGL Y P QKQ RW S 408
Cdd:COG0768 321 PGY YR VG G RT I R D wd RGGHGT LTLT EA L A KSSNVG FY KLAL RLGIDK L Y D YLKK FGLG QK T GID L P GE A SGL L P SPK RW Y 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 409 DI E R AT F S F G Y GL M VTPLQLA RV YA T I GSY G IYRPLSIT K ---------- VDP P VPGE RV FPESIVR TV VHM ME S V AL - P 477
Cdd:COG0768 401 PG E T AT M S I G Q GL S VTPLQLA QA YA A I ANG G VLVKPHLV K eivdpdgevv KEE P EVLR RV ISPETAE TV REG ME G V VN e P 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 478 GG GGVK AAI K GYR I A I KTGTA KK V GP - D G R Y I - NKY IA YTA G V APA SQ PR F A LV VV IND P Q a G KY YGG A V S APVF GA IM G 555
Cdd:COG0768 481 GG TARR AAI P GYR V A G KTGTA QV V DI g N G G Y Y k GRH IA SFV G F APA DN PR Y A VA VV VEN P G - G GA YGG T V A APVF RE IM E 559
....*..
gi 1241331358 556 GV LR TMN 562
Cdd:COG0768 560 AY LR LLG 566
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
23-554
3.87e-96
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 305.60
E-value: 3.87e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 23 R FAL L C G CI L LALAF L LG R VAW LQVI SPDMLVKEGDMRSL R VQQVSTS RG M I T DR S G RP LA VSV P VKAIWAD P KE V H D AG 102
Cdd:TIGR03423 2 R ALV L G G LV L ALFGV L AA R LFY LQVI RGEEYATLSEDNRI R LVPIPPP RG L I L DR N G VL LA DNR P SFSLEIV P EK V D D LD 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 103 gi SVG DR wka LA NA L NIPLDQLSAR --- INANPKGRF I Y L ARQVNPDMADYI -- KKLK LPG IHLREESR RYYP S GE VT AH 177
Cdd:TIGR03423 82 -- ATL DR --- LA KL L DLDPEDIARF lke LKRSRRFEP I P L KSDLTEEEVARF av NQYR LPG VEIEARLK RYYP Y GE LA AH 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 178 LI G FTN - VDSQGI E ---------------- G V EK SFDKW L T G Q PG E R I V RKDRY GRVI EDI S STDSQAAHN L A L S ID EH L 240
Cdd:TIGR03423 157 VL G YVG e INEEDL E rlepanyaggdyigks G I EK YYEDE L R G K PG Y R E V EVNAR GRVI RTL S RVPPVPGKD L V L T ID AR L 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 241 Q ALVYRE L nnavafn KAES G SA V LV D VN TGE V LAM ANS PS YN PN ------------ N L SGT P KEAMR NR T I TD V FE PGST 308
Cdd:TIGR03423 237 Q QAAEKA L ------- GGRR G AV V VM D PR TGE I LAM VST PS FD PN lfvdgisskdyk A L LND P DRPLL NR A I QG V YP PGST 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 309 V KP M V VMT AL QR GV VRENSVLNTIP - YRIN G HEIKDVA R -- YSELT L TGVLQK S SN V GVSK LAL AMPSSALVDTYS RFG L 385
Cdd:TIGR03423 310 F KP V V ALA AL EE GV ITPETRIYCPG y FQLG G RRFRCWK R gg HGRVD L RKAIEE S CD V YFYQ LAL RLGIDKIAEYAK RFG F 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 386 G KA T NLG L V GE R SGL Y P -------- QK Q R W SDIE ra T FSFGY G --- LM VTPLQLA RVY A TIGSY G - I Y R P ---------- 443
Cdd:TIGR03423 390 G QK T GID L P GE K SGL V P srewkrkr FG Q P W YPGD -- T LNVSI G qgy VL VTPLQLA VAT A ALANG G k L Y K P hlvksiedpd 467
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 444 - LSITKVD P P V PGERVFPESIVRT V VHM M ES V A - L PGG GGVK A AI - KG Y RI A I KTGTA KK V GP -- DGR Y INKY I AYT --- 515
Cdd:TIGR03423 468 g GVVRRTE P E V LRPLPISPENLDV V REG M RD V V n G PGG TARR A RL g LP Y KM A G KTGTA QV V SL kq GEK Y DAEQ I PER lrd 547
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 1241331358 516 ---- AGV AP ASQ P RF A LV V VIN dp QA G ky Y G GAVS AP VFGA IM 554
Cdd:TIGR03423 548 half VAF AP YDN P KI A VA V IVE -- HG G -- G G SSAA AP IARK IM 586
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
260-554
3.75e-94
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 290.47
E-value: 3.75e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 260 GSAV LV D VN TGEVLAM ANS PSY N PN N lsgt PKEAM RNR TI T DVF EPGST V KP MVVMT AL QR GV VRENSVLNTI P YRI - N G 338
Cdd:pfam00905 1 GSAV VL D PK TGEVLAM VGK PSY D PN G ---- FIGPL RNR AV T SRY EPGST F KP FTALA AL DN GV LKPDETIFDW P GKQ q G G 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 339 HE I K D -- VARYSEL TL TGV L QK SSN VGVS KLA LAMPSSA L VDTYSR FG L G KA T NL GL V GE RS G L yp QKQR W sd I E R AT F S 416
Cdd:pfam00905 77 KS I G D wn QDQVGIG TL RQA L EY SSN WYMQ KLA QKLGADK L RSYLKK FG Y G NK T GI GL P GE NA G Y -- LTPY W -- L E G AT A S 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 417 FG Y GL MV TPLQ L A RV YA T I GSY G IYR P LSIT K ----- VDP P V PGERVFPE S IVRT V VH M MES V ALP G G G GVK AA IK GY RI 491
Cdd:pfam00905 153 FG I GL TI TPLQ Q A QA YA A I ANG G KLV P PHLV K siedk VDP K V LNKLPISK S TAEK V KD M LRL V VND G T G TGT AA VP GY KV 232
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1241331358 492 A I KTGTA KKV GP D G R -- Y INKY I AYTA G V APA SQ P RF A LV V V I N DP Q ag K YYGG A V S AP V F GA I M 554
Cdd:pfam00905 233 A G KTGTA QVA GP K G G gy Y DGAQ I GWFV G Y APA DN P KY A FA V L I D DP K -- R YYGG K V A AP I F KD I L 295
Name
Accession
Description
Interval
E-value
PRK15105
PRK15105 peptidoglycan synthase FtsI; Provisional
2-579
0e+00
peptidoglycan synthase FtsI; Provisional
Pssm-ID: 185060 [Multi-domain]
Cd Length: 578
Bit Score: 1272.06
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 2 KAAAKTQK P KRQEE H ANFISWRFALLCGCILLAL A FLLGRVAWLQVI S PDMLV K EGDMRSLRVQ Q VSTSRGMITDRSGRP 81
Cdd:PRK15105 1 KAAAKTQK L KRQEE Q ANFISWRFALLCGCILLAL V FLLGRVAWLQVI N PDMLV R EGDMRSLRVQ E VSTSRGMITDRSGRP 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 82 LAVSVPVKAIWADPKEVHDAGGISV G DRWKALA N ALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 161
Cdd:PRK15105 81 LAVSVPVKAIWADPKEVHDAGGISV D DRWKALA D ALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIHL 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 162 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDE H LQ 241
Cdd:PRK15105 161 REESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVIEDISSTDSQAAHNLALSIDE R LQ 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 242 ALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPK E AMRNR T ITDVFEPGSTVKPMVVMTALQRG 321
Cdd:PRK15105 241 ALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMANSPSYNPNNLSGTPK D AMRNR A ITDVFEPGSTVKPMVVMTALQRG 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 322 VV R ENSVLNT I PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 401
Cdd:PRK15105 321 VV K ENSVLNT V PYRINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLGLVGERSGLY 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 402 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 481
Cdd:PRK15105 401 PQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVDPPVPGERVFPESIVRTVVHMMESVALPGGGG 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 482 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 561
Cdd:PRK15105 481 VKAAIKGYRIAIKTGTAKKVGPDGRYINKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTM 560
570
....*....|....*...
gi 1241331358 562 NIEPDAL T TGDKNEFVIN 579
Cdd:PRK15105 561 NIEPDAL P TGDKNEFVIN 578
FtsI
COG0768 Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell ...
17-562
0e+00
Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2) [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440531 [Multi-domain]
Cd Length: 568
Bit Score: 621.07
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 17 ANFISW R FA LL CGCI LL ALAF L L GR VAW LQV ISP D MLVKEGDMRSL R VQQVSTS RG M I T DR S G RP LA VS VPV KAIW ADP K 96
Cdd:COG0768 7 KRLFRR R LL LL FLLV LL LFLL L V GR LFY LQV VEG D EYAELAEENRI R TVPIPAP RG L I Y DR N G NV LA TN VPV YSLY ADP E 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 97 EV H D aggis VGDRWKA LA NA L NIPLDQ L SARINAN p KGRFI YL A R QVN P DM A DY I KK LKLPG IHLRE E SR RYYP S GE VT A 176
Cdd:COG0768 87 EV K D ----- PEETAEK LA KL L GLDPEE L RKKLKKK - SRFPV YL K R NLS P EE A AR I RA LKLPG VYVEA E YK RYYP Y GE LA A 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 177 H LI G FTNV ---- D SQ G IE G V EK SFDKW L T G Q PG E R I V RK D RY GRVI E D ISS - TDSQAAHN L A L S ID EH LQ ALVYRE L NN A 251
Cdd:COG0768 161 H VL G YVGE ingg D GI G KS G L EK AYEDL L R G T PG K R R V EV D AR GRVI R D LGE e KPPVPGKD L V L T ID SD LQ KIAEEA L KK A 240
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 252 V AFN KA E SG SA V LV D VN TGE V LAMA NS PS YN PN NLS G T P K E AM RNR TITDVF EPGST V KP MVVMT AL QR GV VRENSVLN - 330
Cdd:COG0768 241 V EEY KA K SG AV V VM D PK TGE I LAMA SY PS FD PN LFV G G P D E PL RNR AVQGTY EPGST F KP FTAAA AL EE GV ITPDTTFD c 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 331 TIP YR IN G HE I K D -- VARYSE LTLT GV L Q KSSNVG VS KLAL AMPSSA L V D TYSR FGLG KA T NLG L V GE R SGL Y P QKQ RW S 408
Cdd:COG0768 321 PGY YR VG G RT I R D wd RGGHGT LTLT EA L A KSSNVG FY KLAL RLGIDK L Y D YLKK FGLG QK T GID L P GE A SGL L P SPK RW Y 400
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 409 DI E R AT F S F G Y GL M VTPLQLA RV YA T I GSY G IYRPLSIT K ---------- VDP P VPGE RV FPESIVR TV VHM ME S V AL - P 477
Cdd:COG0768 401 PG E T AT M S I G Q GL S VTPLQLA QA YA A I ANG G VLVKPHLV K eivdpdgevv KEE P EVLR RV ISPETAE TV REG ME G V VN e P 480
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 478 GG GGVK AAI K GYR I A I KTGTA KK V GP - D G R Y I - NKY IA YTA G V APA SQ PR F A LV VV IND P Q a G KY YGG A V S APVF GA IM G 555
Cdd:COG0768 481 GG TARR AAI P GYR V A G KTGTA QV V DI g N G G Y Y k GRH IA SFV G F APA DN PR Y A VA VV VEN P G - G GA YGG T V A APVF RE IM E 559
....*..
gi 1241331358 556 GV LR TMN 562
Cdd:COG0768 560 AY LR LLG 566
pbp2_mrdA
TIGR03423 penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ...
23-554
3.87e-96
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain]
Cd Length: 592
Bit Score: 305.60
E-value: 3.87e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 23 R FAL L C G CI L LALAF L LG R VAW LQVI SPDMLVKEGDMRSL R VQQVSTS RG M I T DR S G RP LA VSV P VKAIWAD P KE V H D AG 102
Cdd:TIGR03423 2 R ALV L G G LV L ALFGV L AA R LFY LQVI RGEEYATLSEDNRI R LVPIPPP RG L I L DR N G VL LA DNR P SFSLEIV P EK V D D LD 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 103 gi SVG DR wka LA NA L NIPLDQLSAR --- INANPKGRF I Y L ARQVNPDMADYI -- KKLK LPG IHLREESR RYYP S GE VT AH 177
Cdd:TIGR03423 82 -- ATL DR --- LA KL L DLDPEDIARF lke LKRSRRFEP I P L KSDLTEEEVARF av NQYR LPG VEIEARLK RYYP Y GE LA AH 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 178 LI G FTN - VDSQGI E ---------------- G V EK SFDKW L T G Q PG E R I V RKDRY GRVI EDI S STDSQAAHN L A L S ID EH L 240
Cdd:TIGR03423 157 VL G YVG e INEEDL E rlepanyaggdyigks G I EK YYEDE L R G K PG Y R E V EVNAR GRVI RTL S RVPPVPGKD L V L T ID AR L 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 241 Q ALVYRE L nnavafn KAES G SA V LV D VN TGE V LAM ANS PS YN PN ------------ N L SGT P KEAMR NR T I TD V FE PGST 308
Cdd:TIGR03423 237 Q QAAEKA L ------- GGRR G AV V VM D PR TGE I LAM VST PS FD PN lfvdgisskdyk A L LND P DRPLL NR A I QG V YP PGST 309
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 309 V KP M V VMT AL QR GV VRENSVLNTIP - YRIN G HEIKDVA R -- YSELT L TGVLQK S SN V GVSK LAL AMPSSALVDTYS RFG L 385
Cdd:TIGR03423 310 F KP V V ALA AL EE GV ITPETRIYCPG y FQLG G RRFRCWK R gg HGRVD L RKAIEE S CD V YFYQ LAL RLGIDKIAEYAK RFG F 389
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 386 G KA T NLG L V GE R SGL Y P -------- QK Q R W SDIE ra T FSFGY G --- LM VTPLQLA RVY A TIGSY G - I Y R P ---------- 443
Cdd:TIGR03423 390 G QK T GID L P GE K SGL V P srewkrkr FG Q P W YPGD -- T LNVSI G qgy VL VTPLQLA VAT A ALANG G k L Y K P hlvksiedpd 467
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 444 - LSITKVD P P V PGERVFPESIVRT V VHM M ES V A - L PGG GGVK A AI - KG Y RI A I KTGTA KK V GP -- DGR Y INKY I AYT --- 515
Cdd:TIGR03423 468 g GVVRRTE P E V LRPLPISPENLDV V REG M RD V V n G PGG TARR A RL g LP Y KM A G KTGTA QV V SL kq GEK Y DAEQ I PER lrd 547
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 1241331358 516 ---- AGV AP ASQ P RF A LV V VIN dp QA G ky Y G GAVS AP VFGA IM 554
Cdd:TIGR03423 548 half VAF AP YDN P KI A VA V IVE -- HG G -- G G SSAA AP IARK IM 586
Transpeptidase
pfam00905 Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss: ...
260-554
3.75e-94
Penicillin binding protein transpeptidase domain; The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain]
Cd Length: 296
Bit Score: 290.47
E-value: 3.75e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 260 GSAV LV D VN TGEVLAM ANS PSY N PN N lsgt PKEAM RNR TI T DVF EPGST V KP MVVMT AL QR GV VRENSVLNTI P YRI - N G 338
Cdd:pfam00905 1 GSAV VL D PK TGEVLAM VGK PSY D PN G ---- FIGPL RNR AV T SRY EPGST F KP FTALA AL DN GV LKPDETIFDW P GKQ q G G 76
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 339 HE I K D -- VARYSEL TL TGV L QK SSN VGVS KLA LAMPSSA L VDTYSR FG L G KA T NL GL V GE RS G L yp QKQR W sd I E R AT F S 416
Cdd:pfam00905 77 KS I G D wn QDQVGIG TL RQA L EY SSN WYMQ KLA QKLGADK L RSYLKK FG Y G NK T GI GL P GE NA G Y -- LTPY W -- L E G AT A S 152
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 417 FG Y GL MV TPLQ L A RV YA T I GSY G IYR P LSIT K ----- VDP P V PGERVFPE S IVRT V VH M MES V ALP G G G GVK AA IK GY RI 491
Cdd:pfam00905 153 FG I GL TI TPLQ Q A QA YA A I ANG G KLV P PHLV K siedk VDP K V LNKLPISK S TAEK V KD M LRL V VND G T G TGT AA VP GY KV 232
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1241331358 492 A I KTGTA KKV GP D G R -- Y INKY I AYTA G V APA SQ P RF A LV V V I N DP Q ag K YYGG A V S AP V F GA I M 554
Cdd:pfam00905 233 A G KTGTA QVA GP K G G gy Y DGAQ I GWFV G Y APA DN P KY A FA V L I D DP K -- R YYGG K V A AP I F KD I L 295
PRK10795
PRK10795 penicillin-binding protein 2; Provisional
31-574
1.16e-35
penicillin-binding protein 2; Provisional
Pssm-ID: 236761 [Multi-domain]
Cd Length: 634
Bit Score: 141.83
E-value: 1.16e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 31 ILL ALAF L LGRVAW LQ VISPDMLVKEGDMRSLRVQQVST SRG M I T DR S G R PLA VSVPVKAIWAD P KE V HD aggis VGDRW 110
Cdd:PRK10795 29 ILL LTGV L IANLYN LQ IVRFTDYQTRSNENRIKLVPIAP SRG I I Y DR N G T PLA LNRTIYQLEMM P EK V DN ----- LQQTL 103
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 111 K AL ANALNIPL D QLS A ---- R INAN pkg RF IYLARQV N PDMAD ---- YIKKLKL PG IHLREES RRYYP S G EVTA H L IG FT 182
Cdd:PRK10795 104 D AL RSVVDLTD D DIA A frke R ARSR --- RF TSIPVKT N LTEVQ varf AVNQYRF PG VEVKGYQ RRYYP Y G SALT H V IG YV 180
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 183 N --------- V D SQ G IE ------------ G V E KSFDKW L T G QP G ERI V RKDRY GRVI EDISSTDS QA A H NLA L SI D EH LQ 241
Cdd:PRK10795 181 S kindkdver L D KE G KL anyaathdigkl G I E RYYEDV L H G KT G YEE V EVNNR GRVI RQLHEQPP QA G H DIY L TL D LK LQ 260
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 242 ALVYRE L NNAV A fnkaesg SA V LV D VN TG EV LA MANS PSY N PN ------------ N L SGT P KEAMR NR TITD V FE P G STV 309
Cdd:PRK10795 261 QYIETL L AGSR A ------- AV V VT D PR TG GI LA LVST PSY D PN lfvdgisskdys G L LND P NRPLI NR ATQG V YP P A STV 333
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 310 KP M V VMT AL QR GV VRE N SV L NT i P -- YRIN G H E -- IK D VARY -- SE L TL T GV L QK S SNVGVSKL A LA M PSSA L VDTYSR F 383
Cdd:PRK10795 334 KP Y V AVS AL SA GV ITR N TS L FD - P gw WQLP G S E kr YR D WKKW gh GR L NV T KS L EE S ADTFFYQV A YD M GIDR L SEWMGK F 412
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 384 G L G KA T NLG L VG ERSG LY P Q -------- K QR W SDIERATFSF G Y G L - MV TP L Q LARVYA T IGSY G - IYR P -- L SI T KV D - 450
Cdd:PRK10795 413 G Y G HY T GID L AE ERSG NM P T rewkqkrf K KP W YQGDTIPVGI G Q G Y w TA TP I Q MSKALM T LIND G i VKV P hl L MS T AE D g 492
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 451 PP VP GER vf P ESIVRTVV H M --------- M ES VA - L P G G GGV K A - A IKG Y R IA I K T GTA KKV G -- PDGR Y INKY IA ---- 513
Cdd:PRK10795 493 KQ VP WVQ -- P HEPPVGDI H S gyweiakdg M YG VA n R P N G TAH K Y f A SAP Y K IA A K S GTA QVF G lk ANET Y NAHK IA erlr 570
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1241331358 514 --- YTAGV AP ASQ P RF A LVVVIND pqagkyy GGA vs A P VF G A IM GGV L rtmniep D ALTT GD K N 574
Cdd:PRK10795 571 dhk LMTAF AP YNN P QV A VAIILEN ------- GGA -- G P AV G T IM RQI L ------- D HIML GD N N 618
MrcB
COG0744 Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall ...
235-565
3.45e-32
Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440507 [Multi-domain]
Cd Length: 630
Bit Score: 131.58
E-value: 3.45e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 235 SI D EH LQ ALVYRELN N AVAFN K AES -- GSA V L VD VN TGEVLAM ANSPS Y NPNNL sgtpkeamr NR TITDVFE PGST V KP M 312
Cdd:COG0744 300 TL D PK LQ KAAEKAVK N VLPEG K PGG lq AAL V V VD PK TGEVLAM VGGRD Y GKSQF --------- NR ATQAKRQ PGST F KP F 370
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 313 V VMT AL QR G V v RENSVLNTI P YRIN G -- HEI K DVAR -- YSEL TL TGV L QK S S N VGVSK LA LAMPSSAL VDT YS R F G LGKA 388
Cdd:COG0744 371 V YAA AL EQ G Y - TPATTVDDE P VTFP G gg WSP K NYDG ry RGPV TL REA L AN S L N TPAVR LA QEVGLDKV VDT AR R L G ITSP 449
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 389 TNLGL vgersglypqkqrwsdieratf S FGY G LM - V T PL QL A RV YAT IGSY G I Y - R P LS ITKV --------- DPPVPG E R 457
Cdd:COG0744 450 LDPNP ---------------------- S LAL G TS e V S PL EM A SA YAT FANG G V Y v E P HA ITKV tdadgkvly EAKPKC E Q 507
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 458 V FPESIVRTVVH M MES V a LPG G G G VK A AIK G YRI A I KTGT A kkvgpdgryi N KY ----- IA YT agvapasq P RFALV V VI 532
Cdd:COG0744 508 V ISPEVAYLMTD M LQD V - VTS G T G RA A RLP G RPV A G KTGT T ---------- N DN rdawf VG YT -------- P QLVTA V WV 568
330 340 350
....*....|....*....|....*....|....*.
gi 1241331358 533 --- NDPQA G KYY GG AVS AP VFGAI M GGV L RTMNI E P 565
Cdd:COG0744 569 gnd DNSPM G YVT GG SLP AP IWRDF M EAA L EGLPV E D 604
PBP_dimer
pfam03717 Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of ...
70-219
7.68e-27
Penicillin-binding Protein dimerization domain; This domain is found at the N terminus of Class B High Molecular Weight Penicillin-Binding Proteins. Its function has not been precisely defined, but is strongly implicated in PBP polymerization. The domain forms a largely disordered 'sugar tongs' structure.
Pssm-ID: 427460 [Multi-domain]
Cd Length: 178
Bit Score: 107.02
E-value: 7.68e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 70 S RG M I T DR S G RP LA VSV PV KAIWAD P KEVHD A GGISVGDR wka LA NA L NIPL D QLSARI ------- N ANPKGRFIYLARQ 142
Cdd:pfam03717 5 P RG E I Y DR N G VV LA TNK PV YSLTIT P SKLKK A DALKTALK --- LA KL L SNYE D LDDEDL terflkm N SYKSYYPVVIKKN 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 143 VNPDMADY I KK -- L K LPG IHLREESR RYYP S GE VT AHL I G FTNV ----------------- D SQ G IE G V EK SFDKW L T G Q 203
Cdd:pfam03717 82 LSEEEVAR I EE nl L E LPG VSIETDPV RYYP Y GE LA AHL L G YVGE iteeelekyldkgysrg D LV G KS G L EK QYESV L R G K 161
170
....*....|....*.
gi 1241331358 204 P G E R I V RK D RY GRVI E 219
Cdd:pfam03717 162 D G V R Q V EV D AL GRVI R 177
PbpC
COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ...
228-518
1.18e-17
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443980 [Multi-domain]
Cd Length: 773
Bit Score: 86.81
E-value: 1.18e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 228 AAHNLALSI D EH LQ ALVY R ELNNA V A --- F N KAESGSAVL VD VN TGEVLA MAN S PSY - NPNNLS --- GT pk E A M R N rtit 300
Cdd:COG4953 270 GGTRIRTTL D AG LQ RRLE R LVRRY V R rlk Q N GIHNAAVLV VD NR TGEVLA YVG S ADF f DASRQG qvd MV -- R A L R S ---- 343
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 301 dvfe PGST V KP MVVMT AL QR G VVRENSV L NTI P YRIN G HEIKD var YSE ----- LTLTGV L QK S S N V gvsklalam P SSA 375
Cdd:COG4953 344 ---- PGST L KP FLYGL AL DQ G LIHPETL L ADV P TSFG G YRPEN --- FDG tfqgp VSAREA L AR S L N I --------- P AVR 407
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 376 L VDTY -- S RF g LGKATNL GL vge R SG L Y P QKQ rwsdieratfsfg YGL M ------- VT PLQ L ARV YA TIGSY G IY RPL SI 446
Cdd:COG4953 408 L LEAL gp A RF - YARLRRA GL --- R LL L P P AEH ------------- YGL S lilggae VT LEE L VGL YA ALARG G EA RPL RL 470
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1241331358 447 TKVD P PV PG E R VFPESIVRT V VHMMES V AL P G G - G G VK A AIKGYR IA I KTGT ------ A KK VG PD GR yinkyia YT A GV 518
Cdd:COG4953 471 LAGE P AS PG R R LLSPGAAWL V RDILSD V PR P D G a F G WR A LDSPPP IA W KTGT sygfrd A WA VG FT GR ------- YT V GV 542
PRK14850
PRK14850 penicillin-binding protein 1b; Provisional
260-508
8.21e-04
penicillin-binding protein 1b; Provisional
Pssm-ID: 237835 [Multi-domain]
Cd Length: 764
Bit Score: 42.53
E-value: 8.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 260 GSA V LV D VNT GEV L A MAN S P sy N P N n LS G TPKEAMRN R T I tdvfep GS TV KP MVVM TAL - Q RGVVRE N SVLNTI P YR I -- 336
Cdd:PRK14850 416 VAM V II D RFS GEV R A LIG S S -- K P E - FN G YNRALKAR R S I ------ GS LS KP ITYL TAL s Q PEKYHL N TWISDT P IS I kl 486
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 337 - NG HEIK ---- DVARYSELT L TGV L QK S S N VGVSK L ALAMPSSA LVD TYSRF G LGK atnlglvg ERSGLY P qkqrwsdie 411
Cdd:PRK14850 487 d NG QYWT pknn NFSFSGKVM L IDA L IH S I N IPTVH L SINLGLKK LVD SWILL G ISS -------- NYITPL P --------- 549
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1241331358 412 ra TF S F G y GLMV TP LQL A R V YAT IGS Y G IYR pl S ITKVDPPVPGERV ----- FP E S I ------- VRTVVHM M ES V ALP G G 479
Cdd:PRK14850 550 -- SI S L G - AINL TP MEV A Q V FQI IGS G G YKS -- S LSSIRSIISDDNK vlyqn FP Q S K hvessqa SYLTLYA M QQ V VKS G T 624
250 260 270
....*....|....*....|....*....|....*.
gi 1241331358 480 G - GVKAAI K GYRI A I KTGT AKK ------ VG P DG RYI 508
Cdd:PRK14850 625 A k SLGTIF K EFSL A G KTGT TNN lvdswf VG I DG KQV 660
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
