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Conserved domains on  [gi|1251812611|gb|PDH50222|]
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lysophospholipase [Rhodothermaeota bacterium MED-G16]

Protein Classification

SGNH/GDSL hydrolase family protein( domain architecture ID 10110766)

SGNH/GDSL hydrolase family protein is a hydrolytic enzyme such as an esterase or lipase; may have multifunctional properties including broad substrate specificity and regiospecificity

CATH:  3.40.50.1110
EC:  3.1.-.-
Gene Ontology:  GO:0016788
PubMed:  35871440|15522763
SCOP:  3001315

Graphical summary

 Zoom to residue level

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Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
SGNH_hydrolase_like_1 cd01832
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
27-205 2.30e-35

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.


:

Pssm-ID: 238870  Cd Length: 185  Bit Score: 123.53  E-value: 2.30e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  27 SYLALGDSYTIGESIEVED----SYPNQLKEKIDIIDS---LKIIAKTGWTTDE-LIDTLNNSNLKQYDIVSLLIGVNNQ 98
Cdd:cd01832     1 RYVALGDSITEGVGDPVPDggyrGWADRLAAALAAADPgieYANLAVRGRRTAQiLAEQLPAALALRPDLVTLLAGGNDI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  99 FR-GYSIDNYKVEFENLLAktiRYSNNKKNVFVLSIPDYGV-TPFGQSRGKekiynEINAYNDINRIISEKYNVMYFNIT 176
Cdd:cd01832    81 LRpGTDPDTYRADLEEAVR---RLRAAGARVVVFTIPDPAVlEPFRRRVRA-----RLAAYNAVIRAVAARYGAVHVDLW 152
                         170       180
                  ....*....|....*....|....*....
gi 1251812611 177 DISRRAenDLTLLANDKLHPSEKMYAEWV 205
Cdd:cd01832   153 EHPEFA--DPRLWASDRLHPSAAGHARLA 179
 
Name Accession Description Interval E-value
SGNH_hydrolase_like_1 cd01832
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
27-205 2.30e-35

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.


Pssm-ID: 238870  Cd Length: 185  Bit Score: 123.53  E-value: 2.30e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  27 SYLALGDSYTIGESIEVED----SYPNQLKEKIDIIDS---LKIIAKTGWTTDE-LIDTLNNSNLKQYDIVSLLIGVNNQ 98
Cdd:cd01832     1 RYVALGDSITEGVGDPVPDggyrGWADRLAAALAAADPgieYANLAVRGRRTAQiLAEQLPAALALRPDLVTLLAGGNDI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  99 FR-GYSIDNYKVEFENLLAktiRYSNNKKNVFVLSIPDYGV-TPFGQSRGKekiynEINAYNDINRIISEKYNVMYFNIT 176
Cdd:cd01832    81 LRpGTDPDTYRADLEEAVR---RLRAAGARVVVFTIPDPAVlEPFRRRVRA-----RLAAYNAVIRAVAARYGAVHVDLW 152
                         170       180
                  ....*....|....*....|....*....
gi 1251812611 177 DISRRAenDLTLLANDKLHPSEKMYAEWV 205
Cdd:cd01832   153 EHPEFA--DPRLWASDRLHPSAAGHARLA 179
TesA COG2755
Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle ...
19-208 2.22e-27

Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism];


Pssm-ID: 442045 [Multi-domain]  Cd Length: 191  Bit Score: 102.80  E-value: 2.22e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  19 KDYSRPSLSYLALGDSYTIGESIEVEDSYPNQLKEKIDIIDsLKII--AKTGWTTDELIDTLNNSNLK-QYDIVSLLIGV 95
Cdd:COG2755     2 KAAAGKPLRIVALGDSITAGYGASRERGWPALLARRLAAAD-VRVVnaGISGATTADLLARLDRDLLAlKPDLVVIELGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  96 NNQFRGY--SIDNYKVEFENLLAKTIRYSNNKKnVFVLSIPdygvtPFgqsRGKEKIYNEINAYNDINRIISEKYNVMYF 173
Cdd:COG2755    81 NDLLRGLgvSPEEFRANLEALIDRLRAAGPGAR-VVLVTPP-----PR---LRPNYLNERIEAYNAAIRELAAEYGVPLV 151
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1251812611 174 NITDISRRAENDLTLLANDKLHPSEKMYAEWVNLM 208
Cdd:COG2755   152 DLYAALRDAGDLPDLLTADGLHPNAAGYRLIAEAV 186
Lipase_GDSL_2 pfam13472
GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are ...
30-202 6.54e-19

GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are similar to pfam00657.


Pssm-ID: 463889  Cd Length: 176  Bit Score: 80.28  E-value: 6.54e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  30 ALGDSYTIGESIE-VEDSYPNQLKEKID---IIDSLKIIAKTGWTTDELIDT-LNNSNLKQYDIVSLLIGVNNQFRGYSI 104
Cdd:pfam13472   1 ALGDSITAGYGATgGDRSYPGWLARLLArrlGADVVNNLGISGATTRLDLLErLDDVLRLKPDLVVILLGTNDLGRGVSA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611 105 DNYKVEFENLLAKTIRYSNNKKnvfVLSIPDYGVTPFGQSRGKEkIYNEINAYNDINRIISEKYNVMYFNITDISRRAEN 184
Cdd:pfam13472  81 ARAAANLEALIDALRAAGPDAR---VLLIGPLPVGPPPPLDERR-LNARIAEYNAAIREVAAERGVPYVDLWDALRDDGG 156
                         170
                  ....*....|....*....
gi 1251812611 185 DL-TLLANDKLHPSEKMYA 202
Cdd:pfam13472 157 WLpDLLADDGLHPNAAGYR 175
 
Name Accession Description Interval E-value
SGNH_hydrolase_like_1 cd01832
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
27-205 2.30e-35

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.


Pssm-ID: 238870  Cd Length: 185  Bit Score: 123.53  E-value: 2.30e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  27 SYLALGDSYTIGESIEVED----SYPNQLKEKIDIIDS---LKIIAKTGWTTDE-LIDTLNNSNLKQYDIVSLLIGVNNQ 98
Cdd:cd01832     1 RYVALGDSITEGVGDPVPDggyrGWADRLAAALAAADPgieYANLAVRGRRTAQiLAEQLPAALALRPDLVTLLAGGNDI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  99 FR-GYSIDNYKVEFENLLAktiRYSNNKKNVFVLSIPDYGV-TPFGQSRGKekiynEINAYNDINRIISEKYNVMYFNIT 176
Cdd:cd01832    81 LRpGTDPDTYRADLEEAVR---RLRAAGARVVVFTIPDPAVlEPFRRRVRA-----RLAAYNAVIRAVAARYGAVHVDLW 152
                         170       180
                  ....*....|....*....|....*....
gi 1251812611 177 DISRRAenDLTLLANDKLHPSEKMYAEWV 205
Cdd:cd01832   153 EHPEFA--DPRLWASDRLHPSAAGHARLA 179
TesA COG2755
Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle ...
19-208 2.22e-27

Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK [Cell cycle control, cell division, chromosome partitioning, Lipid transport and metabolism];


Pssm-ID: 442045 [Multi-domain]  Cd Length: 191  Bit Score: 102.80  E-value: 2.22e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  19 KDYSRPSLSYLALGDSYTIGESIEVEDSYPNQLKEKIDIIDsLKII--AKTGWTTDELIDTLNNSNLK-QYDIVSLLIGV 95
Cdd:COG2755     2 KAAAGKPLRIVALGDSITAGYGASRERGWPALLARRLAAAD-VRVVnaGISGATTADLLARLDRDLLAlKPDLVVIELGT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  96 NNQFRGY--SIDNYKVEFENLLAKTIRYSNNKKnVFVLSIPdygvtPFgqsRGKEKIYNEINAYNDINRIISEKYNVMYF 173
Cdd:COG2755    81 NDLLRGLgvSPEEFRANLEALIDRLRAAGPGAR-VVLVTPP-----PR---LRPNYLNERIEAYNAAIRELAAEYGVPLV 151
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1251812611 174 NITDISRRAENDLTLLANDKLHPSEKMYAEWVNLM 208
Cdd:COG2755   152 DLYAALRDAGDLPDLLTADGLHPNAAGYRLIAEAV 186
Lipase_GDSL_2 pfam13472
GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are ...
30-202 6.54e-19

GDSL-like Lipase/Acylhydrolase family; This family of presumed lipases and related enzymes are similar to pfam00657.


Pssm-ID: 463889  Cd Length: 176  Bit Score: 80.28  E-value: 6.54e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  30 ALGDSYTIGESIE-VEDSYPNQLKEKID---IIDSLKIIAKTGWTTDELIDT-LNNSNLKQYDIVSLLIGVNNQFRGYSI 104
Cdd:pfam13472   1 ALGDSITAGYGATgGDRSYPGWLARLLArrlGADVVNNLGISGATTRLDLLErLDDVLRLKPDLVVILLGTNDLGRGVSA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611 105 DNYKVEFENLLAKTIRYSNNKKnvfVLSIPDYGVTPFGQSRGKEkIYNEINAYNDINRIISEKYNVMYFNITDISRRAEN 184
Cdd:pfam13472  81 ARAAANLEALIDALRAAGPDAR---VLLIGPLPVGPPPPLDERR-LNARIAEYNAAIREVAAERGVPYVDLWDALRDDGG 156
                         170
                  ....*....|....*....
gi 1251812611 185 DL-TLLANDKLHPSEKMYA 202
Cdd:pfam13472 157 WLpDLLADDGLHPNAAGYR 175
SGNH_hydrolase cd00229
SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary ...
28-208 3.85e-12

SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.


Pssm-ID: 238141 [Multi-domain]  Cd Length: 187  Bit Score: 62.43  E-value: 3.85e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  28 YLALGDSYTIGESIEVEDSYP----NQLKEKIDIIDSLKIIAKTGWTTDELIDTLNNS---NLKQYDIVSLLIGVNNQFR 100
Cdd:cd00229     1 ILVIGDSITAGYGASSGSTFYslllYLLLLAGGPGVEVINLGVSGATTADALRRLGLRlalLKDKPDLVIIELGTNDLGR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611 101 G--YSIDNYKVEFENLLaKTIRYSNNKKNVFVLSIPDYGVTPFGQSRGKEKiYNEINAynDINRIISEKYNVMYFNITDI 178
Cdd:cd00229    81 GgdTSIDEFKANLEELL-DALRERAPGAKVILITPPPPPPREGLLGRALPR-YNEAIK--AVAAENPAPSGVDLVDLAAL 156
                         170       180       190
                  ....*....|....*....|....*....|
gi 1251812611 179 SRRAENDLtlLANDKLHPSEKMYAEWVNLM 208
Cdd:cd00229   157 LGDEDKSL--YSPDGIHPNPAGHKLIAEAL 184
SGNH_hydrolase_YpmR_like cd04506
Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The ...
28-201 8.77e-10

Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.


Pssm-ID: 239947  Cd Length: 204  Bit Score: 56.10  E-value: 8.77e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  28 YLALGDSYTIGESIEVEDSY-----PNQLKEKIDIIDSLKIIAKTGWTTDELIDTLNNS----NLKQYDIVSLLIGVNNQ 98
Cdd:cd04506     2 IVALGDSLTEGVGDETGKGGyvgrlDKLIETKTVKKVTVQNFGVSGDRSDQLLKRLKTKkvqkELKKADVITITIGGNDL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  99 FRGYSIDN--------------YKVEFENLLaKTIRYSNNKKNVFVLSIpdYgvTPFGQSRGKEKIYNE-INAYNDINRI 163
Cdd:cd04506    82 MQVLEKNFlsldvedfkkaeetYQNNLKKIF-KEIRKLNPDAPIFLVGL--Y--NPFYVYFPNITEINDiVNDWNEASQK 156
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1251812611 164 ISEKYNVMYF-NITDISRRAENDLtLLANDKLHPSEKMY 201
Cdd:cd04506   157 LASQYKNAYFvPIFDLFSDGQNKY-LLTSDHFHPNDKGY 194
FeeA_FeeB_like cd01836
SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of ...
24-214 2.79e-08

SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238874  Cd Length: 191  Bit Score: 51.88  E-value: 2.79e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  24 PSLSYLALGDSYTIG---ESIE--VEDSYPNQLKEKIDIIDSLKIIAKTGWTTDELIDTLNNSNLKQYDIVSLLIGVNNQ 98
Cdd:cd01836     1 PPLRLLVLGDSTAAGvgvETQDqaLAGQLARGLAAITGRGVRWRLFAKTGATSADLLRQLAPLPETRFDVAVISIGVNDV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  99 FRGYSIDNYKVEFENLLaKTIRYSNNKKNVFVLSIPDYGVTP--------FGQSRGkeKIYNEINAyndinRIISEKYNV 170
Cdd:cd01836    81 THLTSIARWRKQLAELV-DALRAKFPGARVVVTAVPPLGRFPalpqplrwLLGRRA--RLLNRALE-----RLASEAPRV 152
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1251812611 171 MYFNITDISRRAendltLLANDKLHPSEKMYAEWVNLMKLQILD 214
Cdd:cd01836   153 TLLPATGPLFPA-----LFASDGFHPSAAGYAVWAEALAPAIAA 191
sialate_O-acetylesterase_like2 cd01828
sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases ...
68-209 1.79e-06

sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238866  Cd Length: 169  Bit Score: 46.50  E-value: 1.79e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  68 GWTTDELIDTLNNSNLKQYDIVSLLIGVNNQFRGYSIDNYKVEFENLLAKTIRYSNNKKnVFVLSIPdygvtPFGQsrgK 147
Cdd:cd01828    31 GDTTRGLLARLDEDVALQPKAIFIMIGINDLAQGTSDEDIVANYRTILEKLRKHFPNIK-IVVQSIL-----PVGE---L 101
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1251812611 148 EKIYNE-INAYNDINRIISEKYNVMYFNI----TDISRRAENDLTllaNDKLHPSEKMYAEWVNLMK 209
Cdd:cd01828   102 KSIPNEqIEELNRQLAQLAQQEGVTFLDLwavfTNADGDLKNEFT---TDGLHLNAKGYAVWAAALQ 165
Lysophospholipase_L1_like cd01822
Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this ...
29-205 1.13e-05

Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.


Pssm-ID: 238860 [Multi-domain]  Cd Length: 177  Bit Score: 44.04  E-value: 1.13e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  29 LALGDSYTIGESIEVEDSYPNQLKEKIDIID-SLKII--AKTGWTTDELIDTLNNSnLKQY--DIVSLLIGVNNQFRGYS 103
Cdd:cd01822     4 LALGDSLTAGYGLPPEEGWPALLQKRLDARGiDVTVInaGVSGDTTAGGLARLPAL-LAQHkpDLVILELGGNDGLRGIP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611 104 IDnykvEFENLLAKTIRYSNNKK-NVFVLSI---PDYGvtpfgqsrgkeKIYNEinAYNDINRIISEKYNV--MYFNITD 177
Cdd:cd01822    83 PD----QTRANLRQMIETAQARGaPVLLVGMqapPNYG-----------PRYTR--RFAAIYPELAEEYGVplVPFFLEG 145
                         170       180       190
                  ....*....|....*....|....*....|.
gi 1251812611 178 ISRRAEndltLLANDKLHPSEKMY---AEWV 205
Cdd:cd01822   146 VAGDPE----LMQSDGIHPNAEGQpiiAENV 172
Lipase_GDSL pfam00657
GDSL-like Lipase/Acylhydrolase;
28-208 1.87e-05

GDSL-like Lipase/Acylhydrolase;


Pssm-ID: 459892 [Multi-domain]  Cd Length: 210  Bit Score: 44.10  E-value: 1.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  28 YLALGDSYT--IGESIEVEDSYPNQLK----EKIDIIDSLKII----AKTGWTTDELIDTL--------NNSNLKQYDIV 89
Cdd:pfam00657   1 IVAFGDSLTdgGGDGPGGRFSWGDLLAdflaRKLGVPGSGYNHganfAIGGATIEDLPIQLeqllrlisDVKDQAKPDLV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  90 SLLIGVNNQFRGYSIDNYKVEF-----ENLLAKTIRYSNNKKNVFVLSIPDYGVTPFgqsRGKEKIYNEINAY--NDINR 162
Cdd:pfam00657  81 TIFIGANDLCNFLSSPARSKKRvpdllDELRANLPQLGLGARKFWVHGLGPLGCTPP---KGCYELYNALAEEynERLNE 157
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1251812611 163 IIS------EKYNVMYFNITD----ISRRAENDLTllaNDKLHPSEKMYAEWVNLM 208
Cdd:pfam00657 158 LVNslaaaaEDANVVYVDIYGfedpTDPCCGIGLE---PDGLHPSEKGYKAVAEAI 210
SGNH_hydrolase_like_2 cd01834
SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The ...
47-198 1.16e-04

SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238872  Cd Length: 191  Bit Score: 41.51  E-value: 1.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  47 YPNQlkeKIDIIDSlkiiaktGWTTDELIDTLNNSNL----KQYDIVSLLIGVNNQFRGY----SIDNYKVEFENLLAKT 118
Cdd:cd01834    29 YPEL---KLTFRNL-------GWSGDTVSDLAARRDRdvlpAKPDVVSIMFGINDSFRGFddpvGLEKFKTNLRRLIDRL 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611 119 IRYSNNKKnvFVLsipdygVTPF-----GQSRGKEKIYNE-INAYNDINRIISEKYNV----MYFNITDISRRAENdlTL 188
Cdd:cd01834    99 KNKESAPR--IVL------VSPIayeanEDPLPDGAEYNAnLAAYADAVRELAAENGVafvdLFTPMKEAFQKAGE--AV 168
                         170
                  ....*....|
gi 1251812611 189 LANDKLHPSE 198
Cdd:cd01834   169 LTVDGVHPNE 178
XynB_like cd01833
SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted ...
68-204 7.58e-04

SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.


Pssm-ID: 238871  Cd Length: 157  Bit Score: 38.76  E-value: 7.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1251812611  68 GWTTDElIDTLNNSNLKQY--DIVSLLIGVNNQFRGYSIDNYKVEFENLLAKTIRYSNNKKnVFVLSIPdygvtPFGQSR 145
Cdd:cd01833    22 GYLIDQ-IAAAAADWVLAAkpDVVLLHLGTNDLVLNRDPDTAPDRLRALIDQMRAANPDVK-IIVATLI-----PTTDAS 94
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1251812611 146 GKekiyNEINAYND-INRIISEKYNV--------MYFNITDISRRAendltllanDKLHPS----EKMYAEW 204
Cdd:cd01833    95 GN----ARIAEYNAaIPGVVADLRTAgspvvlvdMSTGYTTADDLY---------DGLHPNdqgyKKMADAW 153
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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