NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1253836928|gb|PDP62671|]
View 

DUF1661 domain-containing protein [Porphyromonas gingivalis]

Protein Classification

DUF1661 domain-containing protein( domain architecture ID 10545282)

DUF1661 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF1661 pfam07877
Protein of unknown function (DUF1661); This is a family containing bacterial proteins of ...
 13-43 2.03e-12

Protein of unknown function (DUF1661); This is a family containing bacterial proteins of unknown function. Many of the proteins in this family are hypothetical.


:

Pssm-ID: 285160  Cd Length: 31  Bit Score: 57.11  E-value: 2.03e-12
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1253836928  13 LVREVKNLRATAKKISRHFFRKYEPQSGDFR 43
Cdd:pfam07877   1 LVREFKNSRAKTKKFSRHFFRKYAPQSGDFR 31
 
Name Accession Description Interval E-value
DUF1661 pfam07877
Protein of unknown function (DUF1661); This is a family containing bacterial proteins of ...
 13-43 2.03e-12

Protein of unknown function (DUF1661); This is a family containing bacterial proteins of unknown function. Many of the proteins in this family are hypothetical.


Pssm-ID: 285160  Cd Length: 31  Bit Score: 57.11  E-value: 2.03e-12
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1253836928  13 LVREVKNLRATAKKISRHFFRKYEPQSGDFR 43
Cdd:pfam07877   1 LVREFKNSRAKTKKFSRHFFRKYAPQSGDFR 31
 
Name Accession Description Interval E-value
DUF1661 pfam07877
Protein of unknown function (DUF1661); This is a family containing bacterial proteins of ...
 13-43 2.03e-12

Protein of unknown function (DUF1661); This is a family containing bacterial proteins of unknown function. Many of the proteins in this family are hypothetical.


Pssm-ID: 285160  Cd Length: 31  Bit Score: 57.11  E-value: 2.03e-12
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1253836928  13 LVREVKNLRATAKKISRHFFRKYEPQSGDFR 43
Cdd:pfam07877   1 LVREFKNSRAKTKKFSRHFFRKYAPQSGDFR 31
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH