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Conserved domains on  [gi|1255383621|gb|PDW40397|]
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flagellar hook-basal body complex protein FliE [Helicobacter pylori]

Protein Classification

flagellar hook-basal body complex protein FliE( domain architecture ID 10012092)

flagellar hook-basal body complex protein FliE which serves as a structural assembly platform for the rod, and may also serve as a regulator of flagellum-specific secretion

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliE PRK03907
flagellar hook-basal body complex protein FliE;
13-109 4.78e-50

flagellar hook-basal body complex protein FliE;


:

Pssm-ID: 235173  Cd Length: 97  Bit Score: 153.47  E-value: 4.78e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  13 PFSELNTDNRTKREESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLMLE 92
Cdd:PRK03907    1 PFNNLNTDNRTKNEESGSTFKEQKGGEFSKLLKQSINELNKTQEQSEKALADIATGQVKDLHQAAIAIGKAETSMKLMLE 80

                          90
                  ....*....|....*..
gi 1255383621  93 VRNKAISAYKELLRTQI 109
Cdd:PRK03907   81 VRNKAISAYKEILRTQI 97
 
Name Accession Description Interval E-value
fliE PRK03907
flagellar hook-basal body complex protein FliE;
13-109 4.78e-50

flagellar hook-basal body complex protein FliE;


Pssm-ID: 235173  Cd Length: 97  Bit Score: 153.47  E-value: 4.78e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  13 PFSELNTDNRTKREESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLMLE 92
Cdd:PRK03907    1 PFNNLNTDNRTKNEESGSTFKEQKGGEFSKLLKQSINELNKTQEQSEKALADIATGQVKDLHQAAIAIGKAETSMKLMLE 80

                          90
                  ....*....|....*..
gi 1255383621  93 VRNKAISAYKELLRTQI 109
Cdd:PRK03907   81 VRNKAISAYKEILRTQI 97
fliE TIGR00205
flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar ...
 3-108 1.36e-38

flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar hook-basal body complex located possibly at (MS-ring)-rod junction. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 272960  Cd Length: 108  Bit Score: 125.04  E-value: 1.36e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621   3 AIHNDKSLLSPFSELNTDN-RTKREESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATG-QIKDLHQAAIAI 80
Cdd:TIGR00205   1 MVRNDAFAISPFINLNTQNpHTAVNLFSSKSKAQDNDSFSDLLKNSITDLNKTQLASDKVTEQAALGpSSVDLHDVMIAM 80

                          90       100
                  ....*....|....*....|....*...
gi 1255383621  81 GKAETSMKLMLEVRNKAISAYKELLRTQ 108
Cdd:TIGR00205  81 QKASMSMSILKEVRNKAVKAYQEIMRMQ 108
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
27-109 2.82e-26

Flagellar hook-basal body complex protein FliE;


Pssm-ID: 460429  Cd Length: 89  Bit Score: 93.01  E-value: 2.82e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  27 ESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLR 106
Cdd:pfam02049   7 SAASAAAAAGGGSFASVLKDALDEVNQTQQEAEALAEAFATGEPVDLHDVMIAMQKASLSLQLTVQVRNKLVEAYQEIMR 86


                  ...
gi 1255383621 107 TQI 109
Cdd:pfam02049  87 MQV 89
FliE COG1677
Flagellar hook-basal body complex protein FliE [Cell motility];
11-109 4.04e-25

Flagellar hook-basal body complex protein FliE [Cell motility];


Pssm-ID: 441283  Cd Length: 105  Bit Score: 90.80  E-value: 4.04e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  11 LSPFSELNTDNRTKREESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLM 90
Cdd:COG1677     7 INAYAQLQALAAQAAPSAAAAAPAAGGASFGDVLKDALDDVNQTQQEAEALAQAFATGKSVDLHDVMIAMQKASLSLQLT 86

                          90
                  ....*....|....*....
gi 1255383621  91 LEVRNKAISAYKELLRTQI 109
Cdd:COG1677    87 VQVRNKLVEAYQEIMRMQV 105
 
Name Accession Description Interval E-value
fliE PRK03907
flagellar hook-basal body complex protein FliE;
13-109 4.78e-50

flagellar hook-basal body complex protein FliE;


Pssm-ID: 235173  Cd Length: 97  Bit Score: 153.47  E-value: 4.78e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  13 PFSELNTDNRTKREESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLMLE 92
Cdd:PRK03907    1 PFNNLNTDNRTKNEESGSTFKEQKGGEFSKLLKQSINELNKTQEQSEKALADIATGQVKDLHQAAIAIGKAETSMKLMLE 80

                          90
                  ....*....|....*..
gi 1255383621  93 VRNKAISAYKELLRTQI 109
Cdd:PRK03907   81 VRNKAISAYKEILRTQI 97
fliE TIGR00205
flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar ...
 3-108 1.36e-38

flagellar hook-basal body complex protein FliE; fliE is a component of the flagellar hook-basal body complex located possibly at (MS-ring)-rod junction. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 272960  Cd Length: 108  Bit Score: 125.04  E-value: 1.36e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621   3 AIHNDKSLLSPFSELNTDN-RTKREESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATG-QIKDLHQAAIAI 80
Cdd:TIGR00205   1 MVRNDAFAISPFINLNTQNpHTAVNLFSSKSKAQDNDSFSDLLKNSITDLNKTQLASDKVTEQAALGpSSVDLHDVMIAM 80

                          90       100
                  ....*....|....*....|....*...
gi 1255383621  81 GKAETSMKLMLEVRNKAISAYKELLRTQ 108
Cdd:TIGR00205  81 QKASMSMSILKEVRNKAVKAYQEIMRMQ 108
FliE pfam02049
Flagellar hook-basal body complex protein FliE;
27-109 2.82e-26

Flagellar hook-basal body complex protein FliE;


Pssm-ID: 460429  Cd Length: 89  Bit Score: 93.01  E-value: 2.82e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  27 ESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLR 106
Cdd:pfam02049   7 SAASAAAAAGGGSFASVLKDALDEVNQTQQEAEALAEAFATGEPVDLHDVMIAMQKASLSLQLTVQVRNKLVEAYQEIMR 86


                  ...
gi 1255383621 107 TQI 109
Cdd:pfam02049  87 MQV 89
FliE COG1677
Flagellar hook-basal body complex protein FliE [Cell motility];
11-109 4.04e-25

Flagellar hook-basal body complex protein FliE [Cell motility];


Pssm-ID: 441283  Cd Length: 105  Bit Score: 90.80  E-value: 4.04e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  11 LSPFSELNTDNRTKREESGNAFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLM 90
Cdd:COG1677     7 INAYAQLQALAAQAAPSAAAAAPAAGGASFGDVLKDALDDVNQTQQEAEALAQAFATGKSVDLHDVMIAMQKASLSLQLT 86

                          90
                  ....*....|....*....
gi 1255383621  91 LEVRNKAISAYKELLRTQI 109
Cdd:COG1677    87 VQVRNKLVEAYQEIMRMQV 105
fliE PRK12728
flagellar hook-basal body protein FliE; Provisional
 11-109 1.03e-17

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 237183  Cd Length: 102  Bit Score: 71.91  E-value: 1.03e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  11 LSPFSELNTDNRTKREESGNAFKEQKggEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLM 90
Cdd:PRK12728    6 ISPNQKVFDQNGSNKTNKNNPAEAQK--SFSDFLKEALNKVNELQVEADNSTEKLVKGEIVDLHDVMIAAQKASISLQLT 83

                          90
                  ....*....|....*....
gi 1255383621  91 LEVRNKAISAYKELLRTQI 109
Cdd:PRK12728   84 VQIRNKVVEAYQEIMRMQL 102
fliE PRK00253
flagellar hook-basal body protein FliE; Reviewed
 40-109 4.98e-10

flagellar hook-basal body protein FliE; Reviewed


Pssm-ID: 178948  Cd Length: 108  Bit Score: 52.27  E-value: 4.98e-10
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1255383621  40 FSKLLKQSINELNNTQEQSDKALADMATGQIK-DLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
Cdd:PRK00253   38 FAGQLKAALDKVNDTQQAARTLAEKFELGDPGvSLNDVMIALQKASVSFQAGIQVRNKLVAAYQEIMNMQV 108
fliE PRK00732
flagellar hook-basal body complex protein FliE;
26-109 2.78e-08

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179101  Cd Length: 102  Bit Score: 47.44  E-value: 2.78e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  26 EESGNAFKEQKGG-EFSKLLKQSINELNNTQEQSDKALADMATGQiKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKEL 104
Cdd:PRK00732   19 VPSGGGGGGDKGGpSFGALLKDAMGSVLEAGRKSDAQTAAMASGK-ANLMDVVTAVAETDVAVSTLVSVRDRVIQAYEEI 97


                  ....*
gi 1255383621 105 LRTQI 109
Cdd:PRK00732   98 MRMPI 102
fliE PRK01699
flagellar hook-basal body complex protein FliE;
12-109 2.76e-05

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179322  Cd Length: 99  Bit Score: 39.61  E-value: 2.76e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1255383621  12 SPFSELNTDNRTKREESGNAfkeqKGGEFSKLLkqsiNELNNTQEQSDKALADMATGQIKDLHQAAIAIGKAETSMKLML 91
Cdd:PRK01699   10 QPFGAIQSIGAPKTSQTSVV----EGKKFIDLL----EDMNQTQNNAQTAVYDLLTKGVGETHDVLIQQKKAESQMKTAA 81

                          90
                  ....*....|....*...
gi 1255383621  92 EVRNKAISAYKELLRTQI 109
Cdd:PRK01699   82 LVRDNLIENYKSLINMQI 99
fliE PRK00790
flagellar hook-basal body complex protein FliE;
34-109 4.53e-03

flagellar hook-basal body complex protein FliE;


Pssm-ID: 179126  Cd Length: 109  Bit Score: 33.86  E-value: 4.53e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1255383621  34 EQKGGEFSKLLKQSINELNNTQEQSDKA-LADMATGQikDLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI 109
Cdd:PRK00790   35 AAPGASFASVLGQMAGDAVQTLKAAEATsIQAIKGKA--DTREVVDAVMQAEQALQTAVAIRDKVVEAYLEILRMPI 109
fliE PRK12729
flagellar hook-basal body protein FliE; Provisional
 38-104 7.42e-03

flagellar hook-basal body protein FliE; Provisional


Pssm-ID: 183707  Cd Length: 127  Bit Score: 33.86  E-value: 7.42e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1255383621  38 GEFSKLLKQSINELNNTQEQSDKALADMA-TGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKEL 104
Cdd:PRK12729   56 ESFSEAMKNALTSVNDLQVEADELTQKMVfDPNSVDAHDVMIASEKARVALTFTKTIADGVVRAYREL 123
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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