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Conserved domains on  [gi|1263193396|gb|PFX75311|]
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arginine-ornithine antiporter [Bacillus cereus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
arg_ornith_anti super family cl30103
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
10-473 6.09e-176

arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR03810:

Pssm-ID: 163522  Cd Length: 468  Bit Score: 501.89  E-value: 6.09e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGAIIIGWCITAMGMIPLALVYQTLARQKPELEGGIYSYARAGFGEY 89
Cdd:TIGR03810   1 KKLGLGALTALVVGSMIGSGIFSLPSDMAAGAAAGAVLIGWVITGVGMLALAFSFQNLANKKPELDGGVYSYAKAGFGPF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  90 IGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNNVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPI 169
Cdd:TIGR03810  81 MGFISAWGYWLSAWLGNVAYATLLFSTLGYFFPIFGGGNNPPSIIGASVLLWCVHFLVLRGVEGAAFINTITTIAKLVPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 170 VLFIVVMVTAFRWDTFTHDFWG--EGTLSLSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVMGLILVMS 247
Cdd:TIGR03810 161 FVFIVIGIFAFKGDTFTNDFWGnaNGGFSLGSVMTQVKNMMLVTVWVFIGIEGASMLSARAEKRSDVGKATVIGLIGVLA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 248 IYILISVLSMGAMTRSELSVLETPSMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTK 327
Cdd:TIGR03810 241 IYVLVSVLSYGIMTQAQLAGLKNPSMAYVLEHMVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKYFGK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 328 TNKKQTPHMALWISNGVAQIIFIIVLFSESTYQIMYFIASTSILLPYLLSALFQFKLVITNELKDAKLKNGALALIASIY 407
Cdd:TIGR03810 321 ENANGAPTNALWLTNGLIQIFLLTTLFSEQAYNFAISLATSAILVPYLWSAAYQVKLSWRGGQERGRRKQLLIGLVALLY 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1263193396 408 SVWLLYAAGLKNLLLVSIVYGIGIIVYTFARKEQGNRCFAGAEKYVMWAIIIAAITSLYMLLTGNI 473
Cdd:TIGR03810 401 AVWLIYAAGLKYLLLSAILYAPGIYFYARARKEKGGPVFTKGELLIFAAIVAGAVIAIYLLATGLI 466
 
Name Accession Description Interval E-value
arg_ornith_anti TIGR03810
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
10-473 6.09e-176

arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 163522  Cd Length: 468  Bit Score: 501.89  E-value: 6.09e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGAIIIGWCITAMGMIPLALVYQTLARQKPELEGGIYSYARAGFGEY 89
Cdd:TIGR03810   1 KKLGLGALTALVVGSMIGSGIFSLPSDMAAGAAAGAVLIGWVITGVGMLALAFSFQNLANKKPELDGGVYSYAKAGFGPF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  90 IGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNNVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPI 169
Cdd:TIGR03810  81 MGFISAWGYWLSAWLGNVAYATLLFSTLGYFFPIFGGGNNPPSIIGASVLLWCVHFLVLRGVEGAAFINTITTIAKLVPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 170 VLFIVVMVTAFRWDTFTHDFWG--EGTLSLSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVMGLILVMS 247
Cdd:TIGR03810 161 FVFIVIGIFAFKGDTFTNDFWGnaNGGFSLGSVMTQVKNMMLVTVWVFIGIEGASMLSARAEKRSDVGKATVIGLIGVLA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 248 IYILISVLSMGAMTRSELSVLETPSMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTK 327
Cdd:TIGR03810 241 IYVLVSVLSYGIMTQAQLAGLKNPSMAYVLEHMVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKYFGK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 328 TNKKQTPHMALWISNGVAQIIFIIVLFSESTYQIMYFIASTSILLPYLLSALFQFKLVITNELKDAKLKNGALALIASIY 407
Cdd:TIGR03810 321 ENANGAPTNALWLTNGLIQIFLLTTLFSEQAYNFAISLATSAILVPYLWSAAYQVKLSWRGGQERGRRKQLLIGLVALLY 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1263193396 408 SVWLLYAAGLKNLLLVSIVYGIGIIVYTFARKEQGNRCFAGAEKYVMWAIIIAAITSLYMLLTGNI 473
Cdd:TIGR03810 401 AVWLIYAAGLKYLLLSAILYAPGIYFYARARKEKGGPVFTKGELLIFAAIVAGAVIAIYLLATGLI 466
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
10-442 7.42e-64

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 213.22  E-value: 7.42e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLAVGAnSGAIIIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYARAGFGEY 89
Cdd:COG0531    11 RKLGLFDLVALGVGAIIGAGIFVLPGLAAGLA-GPAAILAWLIAGLLALLVALSYAELASAFPR-AGGAYTYARRALGPL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  90 IGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIfkggnnVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPI 169
Cdd:COG0531    89 LGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPA------GGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 170 VLFIVVMVTAFRWDTFTHdfWGEGTLSLSAILGqvknTMLVTLWVFIGVEGAVVLSGRAKN-SRDVGKATVMGLILVMSI 248
Cdd:COG0531   163 LLFIVVGLFAFDPANFTP--FLPAGGGLSGVLA----ALALAFFAFTGFEAIANLAEEAKNpKRNIPRAIILSLLIVGVL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 249 YILISVLSMGAMTRSELSVLETPsMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTKT 328
Cdd:COG0531   237 YILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKV 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 329 NKK-QTPHMALWISNGVAqiiFIIVLFSESTYQIMYFIASTSILLPYLLSALFQFKLVITNEL--KDAKLKNGALALIAS 405
Cdd:COG0531   316 HPRfGTPVNAILLTGVIA---LLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDlpRPFRVPLPLIPILGI 392
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 1263193396 406 IYSVWLLYAAGLKNLLLVSIVYGIGIIVYTFARKEQG 442
Cdd:COG0531   393 LLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHP 429
PRK10644 PRK10644
arginine/agmatine antiporter;
10-441 4.05e-51

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 179.60  E-value: 4.05e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLAvgANSGAIIIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYARAGFGEY 89
Cdd:PRK10644    8 HKVGLIPVTLMVAGNIMGSGVFLLPANLA--STGGIAIYGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYARRCFGPF 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  90 IGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKggNNVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPI 169
Cdd:PRK10644   85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK--DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPI 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 170 VLFIVVMVTAFRWDTFTHDFWGEGTLSLSAIlgqvKNTMLVTLWVFIGVEGAVVLSGRAKN-SRDVGKATVMGLILVMSI 248
Cdd:PRK10644  163 VGIAVFGWFWFRGETYMAAWNVSGLGTFGAI----QSTLNVTLWSFIGVESASVAAGVVKNpKRNVPIATIGGVLIAAVC 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 249 YILISVLSMGAMTRSELSVLETPsMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTKT 328
Cdd:PRK10644  239 YVLSSTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARV 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 329 NKKQTPHMALWISnGVAQIIFIIVLFSESTYQIMYFIASTSI---LLPYLLSALfQFKLVITNELKDAKLKNGALALIAS 405
Cdd:PRK10644  318 NKAGTPVAGLLIV-GVLMTIFQLSSISPNASKEFGLVSSVSViftLVPYLYTCA-ALLLLGHGHFGKARPAYLAVTLIAF 395
                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 1263193396 406 IYSVWLLYAAGLKNLLLVSIVYGIGIIVYTFARKEQ 441
Cdd:PRK10644  396 VYCIWAVVGSGAKEVMWSFVTLMVITAFYALNYNRL 431
AA_permease_2 pfam13520
Amino acid permease;
12-414 2.51e-40

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 149.77  E-value: 2.51e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  12 LGFFPLIALVVGTMVGGGVFSLPHDLAVGANsgAIIIGWCITAMGMIPLALVYQTLARQKPeLEGGIYSYARAGFGEYIG 91
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVASGGPA--LIVWGWIAAIIFSLAVGLVYAELSSALP-RSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  92 FNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNNVASIVGASLLLWTLHFLILFGIRE-ASIMNVIATIGKLVPIV 170
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVREsAKIQNILGILKLLLPLI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 171 LFIVVMVTAFRWDTFThDFWGEGTLSLSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNsRDVGKATVMGLILVMSIYI 250
Cdd:pfam13520 158 LIIILGLVTADGGGFN-LLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK-RNVPKAIFIGVIIVGVLYI 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 251 LISVLSMGAMTRSELSVLET--PSMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFP--KVFT 326
Cdd:pfam13520 236 LVNIAFFGVVPDDEIALSSGlgQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFA 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 327 KTNKKQTPHMALWISNGVAQIIFIIVLFSESTYQIMYFIASTSILLPYLLSALFQFKLVITNELKDAKLKNGALALIASI 406
Cdd:pfam13520 316 KVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVAIFGIL 395

                  ....*...
gi 1263193396 407 YSVWLLYA 414
Cdd:pfam13520 396 FSLFLIVA 403
 
Name Accession Description Interval E-value
arg_ornith_anti TIGR03810
arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine ...
10-473 6.09e-176

arginine-ornithine antiporter; Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 163522  Cd Length: 468  Bit Score: 501.89  E-value: 6.09e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGAIIIGWCITAMGMIPLALVYQTLARQKPELEGGIYSYARAGFGEY 89
Cdd:TIGR03810   1 KKLGLGALTALVVGSMIGSGIFSLPSDMAAGAAAGAVLIGWVITGVGMLALAFSFQNLANKKPELDGGVYSYAKAGFGPF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  90 IGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNNVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPI 169
Cdd:TIGR03810  81 MGFISAWGYWLSAWLGNVAYATLLFSTLGYFFPIFGGGNNPPSIIGASVLLWCVHFLVLRGVEGAAFINTITTIAKLVPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 170 VLFIVVMVTAFRWDTFTHDFWG--EGTLSLSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVMGLILVMS 247
Cdd:TIGR03810 161 FVFIVIGIFAFKGDTFTNDFWGnaNGGFSLGSVMTQVKNMMLVTVWVFIGIEGASMLSARAEKRSDVGKATVIGLIGVLA 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 248 IYILISVLSMGAMTRSELSVLETPSMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTK 327
Cdd:TIGR03810 241 IYVLVSVLSYGIMTQAQLAGLKNPSMAYVLEHMVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKYFGK 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 328 TNKKQTPHMALWISNGVAQIIFIIVLFSESTYQIMYFIASTSILLPYLLSALFQFKLVITNELKDAKLKNGALALIASIY 407
Cdd:TIGR03810 321 ENANGAPTNALWLTNGLIQIFLLTTLFSEQAYNFAISLATSAILVPYLWSAAYQVKLSWRGGQERGRRKQLLIGLVALLY 400
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1263193396 408 SVWLLYAAGLKNLLLVSIVYGIGIIVYTFARKEQGNRCFAGAEKYVMWAIIIAAITSLYMLLTGNI 473
Cdd:TIGR03810 401 AVWLIYAAGLKYLLLSAILYAPGIYFYARARKEKGGPVFTKGELLIFAAIVAGAVIAIYLLATGLI 466
2A0302 TIGR00905
transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several ...
10-475 5.58e-162

transporter, basic amino acid/polyamine antiporter (APA) family; This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129983  Cd Length: 473  Bit Score: 466.46  E-value: 5.58e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGAIIIGWCITAMGMIPLALVYQTLARQKPELEGGIYSYARAGFGEY 89
Cdd:TIGR00905   7 KKLGLFALTALVIGSMIGSGIFSLPQNLASVAGPGAVIIGWIITGVGMLALAFVFAILATKKPELDGGIYAYAREGFGPY 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  90 IGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNNVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPI 169
Cdd:TIGR00905  87 IGFMSGWGYWLSAWIGNVAYAVLLFSALGYFFPLFGSGNPVPSILGASVLLWVFTFLVLRGVRQAAFINTITTIAKLIPL 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 170 VLFIVVMVTAFRWDTFTHDFWGEGTLSLSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVMGLILVMSIY 249
Cdd:TIGR00905 167 FLFIIIGWFWFKLDLFTADFWGHDVPSLGSVFSQVKNTMLVTLWVFIGIEGAVVSSGRAKNKSDVGKATVLGTLGALVIY 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 250 ILISVLSMGAMTRSELSVLETPSMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTKTN 329
Cdd:TIGR00905 247 ILITLLSLGVLPQQELANLPNPSMAAVLEMIVGKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKIFGRVN 326
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 330 KKQTPHMALWISNGVAQIIFIIVLFSESTYQIMYFIASTSILLPYLLSALFQFKLVITNELKDAKL-KNGALALIASIYS 408
Cdd:TIGR00905 327 KNGAPSVALLLTNILIQLFLLLTLLTSSAYNVLVSLAVVMILVPYLLSAAYLLKLAKVGTYPKIKNrKALIVGVIACVYS 406
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1263193396 409 VWLLYAAGLKNLLLVSIVYGIGIIVYTFARKEQGNRCFAGAEKYVMWAIIIAAITSLYMLLTGNIKM 475
Cdd:TIGR00905 407 IWLLYAAGLKYLLLGFILYAPGIIFYGRARKERGKHVFNKKEILIATIIVIAAIIAIWLLVNGSISI 473
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
10-442 7.42e-64

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 213.22  E-value: 7.42e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLAVGAnSGAIIIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYARAGFGEY 89
Cdd:COG0531    11 RKLGLFDLVALGVGAIIGAGIFVLPGLAAGLA-GPAAILAWLIAGLLALLVALSYAELASAFPR-AGGAYTYARRALGPL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  90 IGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIfkggnnVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPI 169
Cdd:COG0531    89 LGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPA------GGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 170 VLFIVVMVTAFRWDTFTHdfWGEGTLSLSAILGqvknTMLVTLWVFIGVEGAVVLSGRAKN-SRDVGKATVMGLILVMSI 248
Cdd:COG0531   163 LLFIVVGLFAFDPANFTP--FLPAGGGLSGVLA----ALALAFFAFTGFEAIANLAEEAKNpKRNIPRAIILSLLIVGVL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 249 YILISVLSMGAMTRSELSVLETPsMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTKT 328
Cdd:COG0531   237 YILVSLALTGVVPYDELAASGAP-LADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKV 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 329 NKK-QTPHMALWISNGVAqiiFIIVLFSESTYQIMYFIASTSILLPYLLSALFQFKLVITNEL--KDAKLKNGALALIAS 405
Cdd:COG0531   316 HPRfGTPVNAILLTGVIA---LLLLLLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDlpRPFRVPLPLIPILGI 392
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 1263193396 406 IYSVWLLYAAGLKNLLLVSIVYGIGIIVYTFARKEQG 442
Cdd:COG0531   393 LLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHP 429
PRK10644 PRK10644
arginine/agmatine antiporter;
10-441 4.05e-51

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 179.60  E-value: 4.05e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLAvgANSGAIIIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYARAGFGEY 89
Cdd:PRK10644    8 HKVGLIPVTLMVAGNIMGSGVFLLPANLA--STGGIAIYGWLVTIIGALGLSMVYAKMSSLDPS-PGGSYAYARRCFGPF 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  90 IGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKggNNVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVPI 169
Cdd:PRK10644   85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILK--DPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPI 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 170 VLFIVVMVTAFRWDTFTHDFWGEGTLSLSAIlgqvKNTMLVTLWVFIGVEGAVVLSGRAKN-SRDVGKATVMGLILVMSI 248
Cdd:PRK10644  163 VGIAVFGWFWFRGETYMAAWNVSGLGTFGAI----QSTLNVTLWSFIGVESASVAAGVVKNpKRNVPIATIGGVLIAAVC 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 249 YILISVLSMGAMTRSELSVLETPsMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTKT 328
Cdd:PRK10644  239 YVLSSTAIMGMIPNAALRVSASP-FGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARV 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 329 NKKQTPHMALWISnGVAQIIFIIVLFSESTYQIMYFIASTSI---LLPYLLSALfQFKLVITNELKDAKLKNGALALIAS 405
Cdd:PRK10644  318 NKAGTPVAGLLIV-GVLMTIFQLSSISPNASKEFGLVSSVSViftLVPYLYTCA-ALLLLGHGHFGKARPAYLAVTLIAF 395
                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 1263193396 406 IYSVWLLYAAGLKNLLLVSIVYGIGIIVYTFARKEQ 441
Cdd:PRK10644  396 VYCIWAVVGSGAKEVMWSFVTLMVITAFYALNYNRL 431
AA_permease_2 pfam13520
Amino acid permease;
12-414 2.51e-40

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 149.77  E-value: 2.51e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  12 LGFFPLIALVVGTMVGGGVFSLPHDLAVGANsgAIIIGWCITAMGMIPLALVYQTLARQKPeLEGGIYSYARAGFGEYIG 91
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVASGGPA--LIVWGWIAAIIFSLAVGLVYAELSSALP-RSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  92 FNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKGGNNVASIVGASLLLWTLHFLILFGIRE-ASIMNVIATIGKLVPIV 170
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSALGPDLVPTTWLTYGIAIAILIIFAIINIRGVREsAKIQNILGILKLLLPLI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 171 LFIVVMVTAFRWDTFThDFWGEGTLSLSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNsRDVGKATVMGLILVMSIYI 250
Cdd:pfam13520 158 LIIILGLVTADGGGFN-LLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKK-RNVPKAIFIGVIIVGVLYI 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 251 LISVLSMGAMTRSELSVLET--PSMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFP--KVFT 326
Cdd:pfam13520 236 LVNIAFFGVVPDDEIALSSGlgQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFA 315
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 327 KTNKKQTPHMALWISNGVAQIIFIIVLFSESTYQIMYFIASTSILLPYLLSALFQFKLVITNELKDAKLKNGALALIASI 406
Cdd:pfam13520 316 KVNKFGSPIRAIILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPVAIFGIL 395

                  ....*...
gi 1263193396 407 YSVWLLYA 414
Cdd:pfam13520 396 FSLFLIVA 403
potE PRK10655
putrescine transporter; Provisional
10-439 3.30e-23

putrescine transporter; Provisional


Pssm-ID: 182622  Cd Length: 438  Bit Score: 101.65  E-value: 3.30e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLA-VGANSgaiIIGWCITAMGMIPLALVYQTLAR--QKPeleGGIYSYARAGF 86
Cdd:PRK10655    6 NKMGVVQLTILTAVNMMGSGIIMLPTKLAqVGTIS---ILSWLVTAVGSMALAYAFAKCGMfsRKS---GGMGGYAEYAF 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  87 GEYIGFNSAWGYWLAGILGNVAtimLLFSTLGYFFPIFKGGNNVASIVGASL-LLWTLHFLILFGIREASIMNVIATIGK 165
Cdd:PRK10655   80 GKSGNFMANYTYGVSLLIANVA---IAISAVGYGTELFGATLSPVQICLATIgVLWLCTVANFGGARITGQISSVTVWGV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 166 LVPIVLFIVVMVTAFRWDTFThDFWGEGTLSLSAILGQvknTMLVTLWVFIGVEGAVVLSGRAKN-SRDVGKATVMGLIL 244
Cdd:PRK10655  157 IIPVVGLSIIGWFWFSPSLYV-AAWNPHHLPFFSAVGS---SIAMTLWAFLGLESACANSDAVENpERNVPIAVLGGTLG 232
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 245 VMSIYILISVLSMGAMTRSELSVLETPsMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKV 324
Cdd:PRK10655  233 AAVIYIVSTNVIAGIVPNMELANSTAP-FGLAFAQMFNPTVGKIVMALMVMSCCGSLLGWQFTIAQVFKSSADEGYFPKI 311
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 325 FTKTNKKQTPHMALwISNGVAQIIFIIVLFSES---TYQIMYFIASTSILLPYLLS--ALFQFKLVITNELKDAKLKNgA 399
Cdd:PRK10655  312 FSRVTKVDAPVQGM-LIIVVIQSLLSLMTISPSlnsQFNVLVNLAVVTNIIPYILSmaALVIIQKVANVPPSKAKVAN-F 389
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 1263193396 400 LALIASIYSVWLLYAAGLKNLLLVSIVYGIGIIVYTFARK 439
Cdd:PRK10655  390 IAFVGALYSFYALYSSGEEAMLYGSIVTFLGWTLYGLISP 429
cadB PRK10435
cadaverine/lysine antiporter;
10-379 4.71e-22

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 98.28  E-value: 4.71e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  10 KKLGFFPLIALVVGTMVGGGVFSLPHDLA-VGANSgaiIIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYArAGFGE 88
Cdd:PRK10435    5 KKIGLFACTGVVAGNMMGSGIALLPANLAsIGSIA---IWGWIISIIGAMSLAYVYARLATKNPQ-QGGPIAYA-GEISP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  89 YIGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPIFKggNNVASIVGASLLLWTLHFLILFGIREASIMNVIATIGKLVP 168
Cdd:PRK10435   80 AFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLN--DPIPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIP 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 169 IVLFIVVMVTAFRWDTFTHDFWGEGTLSLSAILgqvkNTMLVTLWVFIGVEGAVVLSGRAKN-SRDVGKATVMGLILVMS 247
Cdd:PRK10435  158 VVGTAIVGWHWFDAATYAANWNTSDTTDGHAII----KSILLCLWAFVGVESAAVSTGMVKNpKRTVPLATMLGTGLAGI 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 248 IYILISVLSMGAMTRSELSVLETPSMGHVLEhVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTK 327
Cdd:PRK10435  234 IYIAATQVISGMFPASVMAASGAPFAISAST-ILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGE 312
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1263193396 328 TNKKQTPHMALWISN--GVAQIIFIIVLFSESTYQIMYFIASTSI-----LLPYLLSAL 379
Cdd:PRK10435  313 VDKNGIPKKGLLLAAvkMTALMILITLMNSSGGKASDLFGELTGIavlltMLPYFYSCV 371
frlA PRK11357
amino acid permease;
7-352 1.55e-12

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 69.11  E-value: 1.55e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396   7 QIEKKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGAI-IIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYARAG 85
Cdd:PRK11357    5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtVLAFVIGGLIVIPQMCVYAELSTAYPE-NGADYVYLKNA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  86 FGEYIGFNSAWGYWLAGILGNVATIML-LFSTLGYFFPIfkggNNVASIVGASLLLWTLHFLILFGIREASIMNVIATIG 164
Cdd:PRK11357   84 GSRPLAFLSGWASFWANDAPSLSIMALaIVSNLGFLTPI----DPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 165 KLVPIVLFIVVMVTAFRWDTFTHDfwGEGTLSLSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKN-SRDVGKATVMGLI 243
Cdd:PRK11357  160 KIIPFTIVIGLGIFWFKAENFAAP--TTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNpGKTMPRALIGSCL 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 244 LVMSIYILISVLSMGAMTRSELSVLETPsMGHVLEHV--VGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVF 321
Cdd:PRK11357  238 LVLVLYTLLALVISGLMPFDKLANSETP-ISDALTWIpaLGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLF 316
                         330       340       350
                  ....*....|....*....|....*....|..
gi 1263193396 322 PKVFTKTNKK-QTPHMALWISNGVAqIIFIIV 352
Cdd:PRK11357  317 FKCFGHVHPKyNTPDVSIILQGALG-IFFIFV 347
AA_permease pfam00324
Amino acid permease;
44-379 6.17e-11

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 64.26  E-value: 6.17e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  44 GAIIIGWCITAMGMIPLALVYQTLARQKPeLEGGIYSYARAGFGEYIGFNSAWGYWLAGIlgnvATIMLLFSTLGYFFPI 123
Cdd:pfam00324  29 AGALLGYLISGVVIFLVMLSLGEISTNGP-VSGGFYTYASRFLGPSLGFATGWNYWLSWI----TVLALELTAASILIQF 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 124 FKGGNNVASIVGASLLLWTLHFLI-LFGIREASIMNVIATIGKLVPIVLFIVVMV--------TAFRWDTFTHDFWGEGT 194
Cdd:pfam00324 104 WELVPDIPYLWVWGAVFLVLLTIInLVGVKWYGEAEFWFALIKIIAIIGFIIVGIillsggnpNDGAIFRYLGDNGGKNN 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 195 LSlSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSR-DVGKATVMGLILVMSIYILISVLSMGAMTRSELSVLE---- 269
Cdd:pfam00324 184 FP-PGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEkSIPKAILQVIWRITIFYILSLLAIGLLVPWNDPGLLNdsas 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 270 -TPSMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTKTNKKQTPHMALWISNGVAQII 348
Cdd:pfam00324 263 aASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLKKVDKRGVPLRAILVSMVISLLA 342
                         330       340       350
                  ....*....|....*....|....*....|..
gi 1263193396 349 FIIVLFSEST-YQIMYFIASTSILLPYLLSAL 379
Cdd:pfam00324 343 LLLASLNPAIvFNFLLAISGLSGLIVWGLISL 374
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
4-371 1.34e-07

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 53.98  E-value: 1.34e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396   4 GVVQIEKKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANS-GAIIIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYA 82
Cdd:TIGR00911  36 EAVALKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNAGSvGLALIMWAVCGIFSIVGALVYAELGTTIPK-SGGEYNYI 114
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  83 RAGFGEYIGFNSAWGYWLAGILGNVATIMLLFST--LGYFFPIFKGGNNVASIVGASLLLWtLHFLILFGIREASIMNVI 160
Cdd:TIGR00911 115 LEVFGPLLAFLRLWIELLVIRPGSQAVNALNFAIyiLTPVFPDCEVPEWAIRLVAVLCVLL-LTLVNCLSVKWATRVQDI 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 161 ATIGKLVpIVLFIVVM--VTAFRWDTFTHDFWG--EGTlslSAILGQVKNTMLVTLWVFIGVEGAVVLSGRAKNS-RDVG 235
Cdd:TIGR00911 194 FTACKLL-ALLLIIITgwVQLGKGGVESLNPKNafEGT---ETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPyRTLP 269
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 236 KATVMGLILVMSIYILISVLSMGAMTRSEL--SVLETPSMGHVLEHVVGpWgAVAINIGLvaSLVGTLIGWFLLVSEISH 313
Cdd:TIGR00911 270 IAIIISMPIVTFIYVLTNIAYFTVLSPEELlaSLAVAVDFGERLLGVMS-W-AMPALVGL--SCFGSVNGSLFSSSRLFF 345
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1263193396 314 VAGKDGVFPKVFTKTN-KKQTPHMALWISNGVAQI------IFIIVLFSESTYQIMYFIASTSIL 371
Cdd:TIGR00911 346 VGGREGHLPSLLSMIHvKRLTPLPSLLIVCTLTLLmlfsgdIYSLINLISFANWLFNALAVAGLL 410
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
7-374 6.54e-05

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 45.19  E-value: 6.54e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396   7 QIEKKLGFFPLIALVVGTMVGGGVFSLPHDLAVGANSGAIIIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYARAGF 86
Cdd:TIGR00906  25 KMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPK-AGSAYLYSYVTV 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  87 GEYIGFNSAWGYWLAGILGNVATIM--------LLFSTLGYFFPIFKGGNNVASIVG----ASLLLWTLHFLILFGIREA 154
Cdd:TIGR00906 104 GELWAFITGWNLILEYVIGTAAVARswsayfdeLLNKQIGQFRRTYFKLNYDGLAEYpdffAVCLILLLAVLLSFGVKES 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 155 SIMNVIATIgklVPIVLFIVVMVTAFRWDTFTH----DFWGEGTLSLSAILGQVKNTMlVTLWVFIGVEGAVVLSGRAKN 230
Cdd:TIGR00906 184 AWVNKIFTA---INILVLLFVIIAGFTKADVANwsitEEKGAGGFMPYGFTGVLSGAA-TCFFAFIGFDAIATTGEEVKN 259
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 231 -SRDVGKATVMGLILVMSIYILISVlSMGAMTRSELSVLETPSMGhVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVS 309
Cdd:TIGR00906 260 pQRAIPIGIVTSLLVCFVAYFLMSA-ALTLMMPYYLLDPDAPFPV-AFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLP 337
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1263193396 310 EISHVAGKDGVFPKVFTKTN-KKQTPHMALWISNGVAQIIFIIV-------LFSESTYQIMYFIASTSILLPY 374
Cdd:TIGR00906 338 RVIYAMARDGLLFKWLAQINsKTKTPINATVVSGAIAALMAFLFdlkalvdLLSIGTLLAYSLVAACVLILRY 410
PRK10197 PRK10197
GABA permease;
37-384 1.86e-03

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 40.76  E-value: 1.86e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  37 LAVGANSGAIIIGWCITAMGMIPLALVYQTLARQKPElEGGIYSYARAGFGEYIGFNSAWGYWLAGIL-----GNVATIM 111
Cdd:PRK10197   18 VAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPD-TGSFSTYADKAIGRWAGYTIGWLYWWFWVLvipleANIAAMI 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 112 LLFSTLGYFFPIFKGGNNVAsIVGASLLlwtlhflilfGIREASIMNVIATIGKLVPIVLFIVVMVTA------FRWDTF 185
Cdd:PRK10197   97 LHSWVPGIPIWLFSLVITLA-LTGSNLL----------SVKNYGEFEFWLALCKVIAILAFIFLGAVAisgfypYAEVSG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 186 THDFWGEGTLSLSAiLGQVKNTMLVTLWVFIGVEGAVVLSGRAKNSRDVGKATVMGLILVMSIYILISVLSMGAMTRSEL 265
Cdd:PRK10197  166 ISRLWDSGGFMPNG-FGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNM 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 266 SVLET-PSMGHVLEHVVGPWGAVAINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTKTNKKQTPHMALWISNGV 344
Cdd:PRK10197  245 PGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVLLSTGA 324
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1263193396 345 AQIIFIIVLFSESTYQIMYFIASTSI-LLPYLLSALFQFKL 384
Cdd:PRK10197  325 AFLTVVVNYYAPAKVFKFLIDSSGAIaLLVYLVIAVSQLRM 365
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
76-384 2.50e-03

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 40.10  E-value: 2.50e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396  76 GGIYSYARAGFGEYIGFNSAWGYWLAGILGNVATIMLLFSTLGYFFPifkggnnvasivGASLLLWTLHFLILFGireas 155
Cdd:COG1113    79 GSFSDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFP------------DVPQWVWALVFLVLLT----- 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 156 IMNVIA-----------TIGKLVPIVLFIVV----MVTAFRWDTFT----HDFWGEGTL---SLSAILGqvknTMLVTLW 213
Cdd:COG1113   142 AINLLSvklfgefefwfALIKVVAIVAFIVVglllIFFGFGLPGGPpaglSNLWDHGGFfpnGIGGVLA----ALQIVVF 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 214 VFIGVEGAVVLSGRAKN-SRDVGKA--TVMGLIL---VMSIYILISVLSMgamtrSELSVLETPsMGHVLEHVVGPWGAV 287
Cdd:COG1113   218 AFGGIELVGIAAAEAKDpEKTIPKAinSVIWRILlfyVGSLFVILALVPW-----NQIGAGGSP-FVTVFSLLGIPAAAG 291
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1263193396 288 AINIGLVASLVGTLIGWFLLVSEISHVAGKDGVFPKVFTKTNKKQTPHMALWISNGVAQI-IFIIVLFSESTYQIMYFIA 366
Cdd:COG1113   292 IMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIgVVLNYLLPEKAFTFLLSIS 371
                         330
                  ....*....|....*...
gi 1263193396 367 STSILLPYLLSALFQFKL 384
Cdd:COG1113   372 GFGALFVWLMILVSQLKF 389
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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