|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
4-440 |
6.64e-136 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 399.20 E-value: 6.64e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 4 KYLKIMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYVVAE------------- 70
Cdd:COG1167 13 LYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARlpapapapraaaa 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 71 ------FQHRTNENEVIDFLSAGPDKNVMPYLEFQHCINQAIEHYKEELFTYSDQQGSYSLRVQLVKHLQNLQVFTQAER 144
Cdd:COG1167 93 vaapalRRLLEAAPGVIDLGSGAPDPDLFPLAALRRALRRALRRLPPALLGYGDPQGLPELREAIARYLARRGVPASPDQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 145 LVVVSGSQQALHLLVSMpFPNGKNNILIEQPTYFGFIESLTLHQATAFGIELSMKGIDLDRLEYIFRNNDIKFFYIIPRF 224
Cdd:COG1167 173 ILITSGAQQALDLALRA-LLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVDEDGLDLDALEAALRRHRPRAVYVTPSH 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 225 HNPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGDLDPDAKS-DPLFSFNPSGRVIYIKSFSKIFLPGLRIAAVVLP-SL 302
Cdd:COG1167 252 QNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPpPPLAALDAPGRVIYIGSFSKTLAPGLRLGYLVAPgRL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 303 MNSnFLRYKFSSDFNSSALSQGALEIYLKSGMFTSHLKKIKEVYHTKMQTLVEACDLLLPAHTHFSKPTSGFYLSISLPE 382
Cdd:COG1167 332 IER-LARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVTGPPGGLHLWLELPE 410
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1265182472 383 HVTAKQIVHMLNEQHIYVDDASRFFLPEYKRDTlLRLSISQVNTNTIKRGIEQLAQCI 440
Cdd:COG1167 411 GVDAEALAAAALARGILVAPGSAFSADGPPRNG-LRLGFGAPSEEELEEALRRLAELL 467
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
81-438 |
1.41e-59 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 198.72 E-value: 1.41e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 81 IDFLSAGPDKNVMPYLEFqhciNQAIEHYKEELFTYSDQQGSYSLRVQLVKHLQN-LQVFTQAERLVVVSGSQQALHLLV 159
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLE----ALAAAALRAGLLGYYPDPGLPELREAIAEWLGRrGGVDVPPEEIVVTNGAQEALSLLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 160 SMpFPNGKNNILIEQPTYFGFIESLTLHQATAFGIELSMKGIDLDRLEYIF--RNNDIKFFYIIPrFHNPLGHCYTNFEK 237
Cdd:cd00609 77 RA-LLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEaaKTPKTKLLYLNN-PNNPTGAVLSEEEL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 238 KKIVELAEKYDVYIVEDDFLGDLDPDAKSDPLFSFNPS-GRVIYIKSFSKIF-LPGLRIAAVVLP-SLMNSNFLRYKFSS 314
Cdd:cd00609 155 EELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAyERVIVLRSFSKTFgLPGLRIGYLIAPpEELLERLKKLLPYT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 315 DFNSSALSQGALEIYLKSGmfTSHLKKIKEVYHTKMQTLVEACDLLLPAHTHfsKPTSGFYLSISLPEHVTAKQIVHMLN 394
Cdd:cd00609 235 TSGPSTLSQAAAAAALDDG--EEHLEELRERYRRRRDALLEALKELGPLVVV--KPSGGFFLWLDLPEGDDEEFLERLLL 310
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1265182472 395 EQHIYVDDASRFFlpeYKRDTLLRLSISQvNTNTIKRGIEQLAQ 438
Cdd:cd00609 311 EAGVVVRPGSAFG---EGGEGFVRLSFAT-PEEELEEALERLAE 350
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
91-436 |
1.27e-24 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 104.31 E-value: 1.27e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 91 NVMPYLEFQHCINQAIEHY-KEELFTYSDQQGSYSLRVQLVKHLQNL-QVFTQAERLVVVSGSQQALHLLVSMPFPNGKN 168
Cdd:pfam00155 9 NEYLGDTLPAVAKAEKDALaGGTRNLYGPTDGHPELREALAKFLGRSpVLKLDREAAVVFGSGAGANIEALIFLLANPGD 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 169 NILIEQPTYFGFIESLTLHQATAFGIELSM---KGIDLDRLEYIFRNNdIKFFyIIPRFHNPLGHCYTNFEKKKIVELAE 245
Cdd:pfam00155 89 AILVPAPTYASYIRIARLAGGEVVRYPLYDsndFHLDFDALEAALKEK-PKVV-LHTSPHNPTGTVATLEELEKLLDLAK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 246 KYDVYIVEDDFLGDL---DPDAKSDPLFsFNPSGRVIYIKSFSKIF-LPGLRIAAVVLpslmNSNFLRY--KFSSDFNSS 319
Cdd:pfam00155 167 EHNILLLVDEAYAGFvfgSPDAVATRAL-LAEGPNLLVVGSFSKAFgLAGWRVGYILG----NAAVISQlrKLARPFYSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 320 ALSQGAL-EIYLKSGMFTSHLKKIKEVYHTKMQTLVEACDLLLPAHThfsKPTSGFYlSISLPEHVTAKQIVH-MLNEQH 397
Cdd:pfam00155 242 THLQAAAaAALSDPLLVASELEEMRQRIKERRDYLRDGLQAAGLSVL---PSQAGFF-LLTGLDPETAKELAQvLLEEVG 317
|
330 340 350
....*....|....*....|....*....|....*....
gi 1265182472 398 IYVDDASRFFLPEYkrdtlLRLSISQVNTNTIKRGIEQL 436
Cdd:pfam00155 318 VYVTPGSSPGVPGW-----LRITVAGGTEEELEELLEAI 351
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
8-441 |
1.52e-12 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 68.92 E-value: 1.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 8 IMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYV-----VAEFQHRTNENEVID 82
Cdd:PRK15481 10 IFDSIRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIrgspsPVALEGGDPGTPLHD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 83 FLSAGPDKNVMPYLefqhciNQAIEH--YKEELftYSDQQGSYSLRVQLVKHLQnlQVFTQAERLVVVSGSQQALH-LLV 159
Cdd:PRK15481 90 LAGGNPDPQRLPDL------SRYFARlsRTPRL--YGDAPVSPELHAWAARWLR--DDCPVAFEIDLTSGAIDAIErLLC 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 160 SMPFPNGKnnILIEQPTYFGFIESLTLHQATAFGIELSMKGIDLDRLEYIFRNNdIKFFYIIPRFHNPLGHCYTNFEKKK 239
Cdd:PRK15481 160 AHLLPGDS--VAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQG-ARAVILTPRAHNPTGCSLSARRAAA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 240 IVELAEKY-DVYIVEDDFLGDLdpdaKSDPLFSFNP--SGRVIYIKSFSKIFLPGLRIAAVVLPSlMNSNFLRYKFSSDF 316
Cdd:PRK15481 237 LRNLLARYpQVLVIIDDHFALL----SSSPYHSVIPqtTQRWALIRSVSKALGPDLRLAFVASDS-ATSARLRLRLNSGT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 317 N-SSALSQGALEIYLKSGMFTSHLKKIKEVYHTKMQTLVEAcdllLPAH-THFSKPTSGFYLSISLPEHVTAkqIVHMLN 394
Cdd:PRK15481 312 QwVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARA----LQQYgIAIPSPGDGLNLWLPLDTDSQA--TALTLA 385
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1265182472 395 EQHIYVDDASRFFLPEYKRDtlLRLSISQVNTNTIKRGIEQLAQCIT 441
Cdd:PRK15481 386 KSGWLVREGEAFGVSAPSHG--LRITLSTLNDAEINRLAADLHQALN 430
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
8-67 |
9.50e-12 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 59.90 E-value: 9.50e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 8 IMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYV 67
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
116-418 |
1.12e-09 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 60.18 E-value: 1.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 116 YSDQQGSYSLRVQLVKHLQNLQVFTQAERLVVVSGSQQALHLLVSMpFPNGKNNILIEQPtyfGFIESLTLhqATAFGIE 195
Cdd:TIGR01264 69 YAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAA-LANAGQNILVPRP---GFPLYETL--AESMGIE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 196 LSMKG--------IDLDRLEYIFrnnDIKFFYIIprFHNPLGHCYTNFEKK---KIVELAEKYDVYIVEDDFLGDLD-PD 263
Cdd:TIGR01264 143 VKLYNllpdksweIDLKQLESLI---DEKTAALI--VNNPSNPCGSVFSRQhleEILAVAERQCLPIIADEIYGDMVfSG 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 264 AKSDPLFSFNPSGRVIYIKSFSKIFL-PGLRIAAVVLPSLMNS-----NFLRYKFSSDFNSSALSQGALEIYLksgmfts 337
Cdd:TIGR01264 218 ATFEPLASLSSTVPILSCGGLAKRWLvPGWRLGWIIIHDRRGIlrdirDGLVKLSQRILGPCTIVQGALPSIL------- 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 338 hLKKIKEVYHTKMQTLVEACDLLLPAHTHF-----SKPTSGFYL--SISLPEHVTAKQIVH----MLNEQHIYVDDASRF 406
Cdd:TIGR01264 291 -LRTPQEYFDGTLSVLESNAMLCYGALAAVpglrpVMPSGAMYMmvGIEMEHFPEFKNDVEfterLVAEQSVFCLPGSCF 369
|
330
....*....|..
gi 1265182472 407 FLPEYKRDTLLR 418
Cdd:TIGR01264 370 EYPGFFRVVLTV 381
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
4-440 |
6.64e-136 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 399.20 E-value: 6.64e-136
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 4 KYLKIMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYVVAE------------- 70
Cdd:COG1167 13 LYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFVAARlpapapapraaaa 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 71 ------FQHRTNENEVIDFLSAGPDKNVMPYLEFQHCINQAIEHYKEELFTYSDQQGSYSLRVQLVKHLQNLQVFTQAER 144
Cdd:COG1167 93 vaapalRRLLEAAPGVIDLGSGAPDPDLFPLAALRRALRRALRRLPPALLGYGDPQGLPELREAIARYLARRGVPASPDQ 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 145 LVVVSGSQQALHLLVSMpFPNGKNNILIEQPTYFGFIESLTLHQATAFGIELSMKGIDLDRLEYIFRNNDIKFFYIIPRF 224
Cdd:COG1167 173 ILITSGAQQALDLALRA-LLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVDEDGLDLDALEAALRRHRPRAVYVTPSH 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 225 HNPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGDLDPDAKS-DPLFSFNPSGRVIYIKSFSKIFLPGLRIAAVVLP-SL 302
Cdd:COG1167 252 QNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPpPPLAALDAPGRVIYIGSFSKTLAPGLRLGYLVAPgRL 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 303 MNSnFLRYKFSSDFNSSALSQGALEIYLKSGMFTSHLKKIKEVYHTKMQTLVEACDLLLPAHTHFSKPTSGFYLSISLPE 382
Cdd:COG1167 332 IER-LARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLPDGLRVTGPPGGLHLWLELPE 410
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1265182472 383 HVTAKQIVHMLNEQHIYVDDASRFFLPEYKRDTlLRLSISQVNTNTIKRGIEQLAQCI 440
Cdd:COG1167 411 GVDAEALAAAALARGILVAPGSAFSADGPPRNG-LRLGFGAPSEEELEEALRRLAELL 467
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
81-438 |
1.41e-59 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 198.72 E-value: 1.41e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 81 IDFLSAGPDKNVMPYLEFqhciNQAIEHYKEELFTYSDQQGSYSLRVQLVKHLQN-LQVFTQAERLVVVSGSQQALHLLV 159
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLE----ALAAAALRAGLLGYYPDPGLPELREAIAEWLGRrGGVDVPPEEIVVTNGAQEALSLLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 160 SMpFPNGKNNILIEQPTYFGFIESLTLHQATAFGIELSMKGIDLDRLEYIF--RNNDIKFFYIIPrFHNPLGHCYTNFEK 237
Cdd:cd00609 77 RA-LLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEaaKTPKTKLLYLNN-PNNPTGAVLSEEEL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 238 KKIVELAEKYDVYIVEDDFLGDLDPDAKSDPLFSFNPS-GRVIYIKSFSKIF-LPGLRIAAVVLP-SLMNSNFLRYKFSS 314
Cdd:cd00609 155 EELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAyERVIVLRSFSKTFgLPGLRIGYLIAPpEELLERLKKLLPYT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 315 DFNSSALSQGALEIYLKSGmfTSHLKKIKEVYHTKMQTLVEACDLLLPAHTHfsKPTSGFYLSISLPEHVTAKQIVHMLN 394
Cdd:cd00609 235 TSGPSTLSQAAAAAALDDG--EEHLEELRERYRRRRDALLEALKELGPLVVV--KPSGGFFLWLDLPEGDDEEFLERLLL 310
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1265182472 395 EQHIYVDDASRFFlpeYKRDTLLRLSISQvNTNTIKRGIEQLAQ 438
Cdd:cd00609 311 EAGVVVRPGSAFG---EGGEGFVRLSFAT-PEEELEEALERLAE 350
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
91-436 |
1.27e-24 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 104.31 E-value: 1.27e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 91 NVMPYLEFQHCINQAIEHY-KEELFTYSDQQGSYSLRVQLVKHLQNL-QVFTQAERLVVVSGSQQALHLLVSMPFPNGKN 168
Cdd:pfam00155 9 NEYLGDTLPAVAKAEKDALaGGTRNLYGPTDGHPELREALAKFLGRSpVLKLDREAAVVFGSGAGANIEALIFLLANPGD 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 169 NILIEQPTYFGFIESLTLHQATAFGIELSM---KGIDLDRLEYIFRNNdIKFFyIIPRFHNPLGHCYTNFEKKKIVELAE 245
Cdd:pfam00155 89 AILVPAPTYASYIRIARLAGGEVVRYPLYDsndFHLDFDALEAALKEK-PKVV-LHTSPHNPTGTVATLEELEKLLDLAK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 246 KYDVYIVEDDFLGDL---DPDAKSDPLFsFNPSGRVIYIKSFSKIF-LPGLRIAAVVLpslmNSNFLRY--KFSSDFNSS 319
Cdd:pfam00155 167 EHNILLLVDEAYAGFvfgSPDAVATRAL-LAEGPNLLVVGSFSKAFgLAGWRVGYILG----NAAVISQlrKLARPFYSS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 320 ALSQGAL-EIYLKSGMFTSHLKKIKEVYHTKMQTLVEACDLLLPAHThfsKPTSGFYlSISLPEHVTAKQIVH-MLNEQH 397
Cdd:pfam00155 242 THLQAAAaAALSDPLLVASELEEMRQRIKERRDYLRDGLQAAGLSVL---PSQAGFF-LLTGLDPETAKELAQvLLEEVG 317
|
330 340 350
....*....|....*....|....*....|....*....
gi 1265182472 398 IYVDDASRFFLPEYkrdtlLRLSISQVNTNTIKRGIEQL 436
Cdd:pfam00155 318 VYVTPGSSPGVPGW-----LRITVAGGTEEELEELLEAI 351
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
79-438 |
2.80e-24 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 104.06 E-value: 2.80e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 79 EVIDfLSAG-PDKNVmpyleFQHCINQAIEHYKEELFTYSDQQGSYSLRVQLVKHLQNLQ-VFTQAERLVVVSGSQQALH 156
Cdd:COG0436 31 DVID-LGIGePDFPT-----PDHIREAAIEALDDGVTGYTPSAGIPELREAIAAYYKRRYgVDLDPDEILVTNGAKEALA 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 157 LLVSMPFPNGkNNILIEQPTYFGFIESLTLHQATAFGIELSMKG---IDLDRLE-YIfrNNDIKFFYII-PrfHNPLGHC 231
Cdd:COG0436 105 LALLALLNPG-DEVLVPDPGYPSYRAAVRLAGGKPVPVPLDEENgflPDPEALEaAI--TPRTKAIVLNsP--NNPTGAV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 232 YTNFEKKKIVELAEKYDVYIVEDDFLGDLDPD-AKSDPLFSF-NPSGRVIYIKSFSKIF-LPGLRIAAVVLPSLMNSNFL 308
Cdd:COG0436 180 YSREELEALAELAREHDLLVISDEIYEELVYDgAEHVSILSLpGLKDRTIVINSFSKSYaMTGWRIGYAVGPPELIAALL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 309 RYKFSSDFNSSALSQGALEIYLKSGMftSHLKKIKEVYHTKMQTLVEAcdlLLPAHTHFSKPTSGFYLSISLPEHV-TAK 387
Cdd:COG0436 260 KLQSNLTSCAPTPAQYAAAAALEGPQ--DYVEEMRAEYRRRRDLLVEG---LNEIGLSVVKPEGAFYLFADVPELGlDSE 334
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1265182472 388 QIV-HMLNEQHIYV-------DDASRFFlpeykrdtllRLSISQvNTNTIKRGIEQLAQ 438
Cdd:COG0436 335 EFAeRLLEEAGVAVvpgsafgPAGEGYV----------RISYAT-SEERLEEALERLAR 382
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
5-69 |
8.23e-18 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 79.07 E-value: 8.23e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1265182472 5 YLKIMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYVVA 69
Cdd:COG1725 12 YEQIADQIKEAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRGKGTFVAE 76
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
4-67 |
8.60e-18 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 77.10 E-value: 8.60e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1265182472 4 KYLKIMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYV 67
Cdd:cd07377 2 LYEQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFV 65
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
8-441 |
1.52e-12 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 68.92 E-value: 1.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 8 IMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYV-----VAEFQHRTNENEVID 82
Cdd:PRK15481 10 IFDSIRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIrgspsPVALEGGDPGTPLHD 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 83 FLSAGPDKNVMPYLefqhciNQAIEH--YKEELftYSDQQGSYSLRVQLVKHLQnlQVFTQAERLVVVSGSQQALH-LLV 159
Cdd:PRK15481 90 LAGGNPDPQRLPDL------SRYFARlsRTPRL--YGDAPVSPELHAWAARWLR--DDCPVAFEIDLTSGAIDAIErLLC 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 160 SMPFPNGKnnILIEQPTYFGFIESLTLHQATAFGIELSMKGIDLDRLEYIFRNNdIKFFYIIPRFHNPLGHCYTNFEKKK 239
Cdd:PRK15481 160 AHLLPGDS--VAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERALAQG-ARAVILTPRAHNPTGCSLSARRAAA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 240 IVELAEKY-DVYIVEDDFLGDLdpdaKSDPLFSFNP--SGRVIYIKSFSKIFLPGLRIAAVVLPSlMNSNFLRYKFSSDF 316
Cdd:PRK15481 237 LRNLLARYpQVLVIIDDHFALL----SSSPYHSVIPqtTQRWALIRSVSKALGPDLRLAFVASDS-ATSARLRLRLNSGT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 317 N-SSALSQGALEIYLKSGMFTSHLKKIKEVYHTKMQTLVEAcdllLPAH-THFSKPTSGFYLSISLPEHVTAkqIVHMLN 394
Cdd:PRK15481 312 QwVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARA----LQQYgIAIPSPGDGLNLWLPLDTDSQA--TALTLA 385
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1265182472 395 EQHIYVDDASRFFLPEYKRDtlLRLSISQVNTNTIKRGIEQLAQCIT 441
Cdd:PRK15481 386 KSGWLVREGEAFGVSAPSHG--LRITLSTLNDAEINRLAADLHQALN 430
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
226-400 |
3.33e-12 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 67.86 E-value: 3.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 226 NPLGHCYTNFEKKKIVELAEKYDVYIVED----DFLGDLDPDAKSDPlfsfnpsGRVIYIKSFSKIF-LPGLRIAAVV-L 299
Cdd:PRK06225 168 NPLGSSYTEEEIKEFAEIARDNDAFLLHDctyrDFAREHTLAAEYAP-------EHTVTSYSFSKIFgMAGLRIGAVVaT 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 300 PSLMNSnfLRYKFSSDFNSSALSQGALEIYLKSGmfTSHLKKIKEVYHTKMQTLVEACD----LLLPAHthfskPTSGFY 375
Cdd:PRK06225 241 PDLIEV--VKSIVINDLGTNVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAVDeiegVFLPVY-----PSHGNM 311
|
170 180
....*....|....*....|....*.
gi 1265182472 376 LSISLPEH-VTAKQIVHMLNEQHIYV 400
Cdd:PRK06225 312 MVIDISEAgIDPEDLVEYLLERKIFV 337
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
4-69 |
7.55e-12 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 64.88 E-value: 7.55e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1265182472 4 KYLKIMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYVVA 69
Cdd:COG2188 6 LYLQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFVAE 71
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
8-67 |
9.50e-12 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 59.90 E-value: 9.50e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 8 IMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYV 67
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| MalY |
COG1168 |
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor ... |
141-301 |
1.06e-10 |
|
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism, General function prediction only];
Pssm-ID: 440782 Cd Length: 387 Bit Score: 63.19 E-value: 1.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 141 QAERLVVVSGSQQALHLLVSMpFPNGKNNILIEQPTYFGFIESLTLHQATAFGIELSMKG----IDLDRLEYIFRNNdIK 216
Cdd:COG1168 86 DPEWIVFTPGVVPGLALAIRA-FTEPGDGVLIQTPVYPPFFKAIENNGRELVENPLILEDgryrIDFDDLEAKLDPG-VK 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 217 FFyII--PrfHNPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGDL-DPDAKSDPLFSFNPSG--RVIYIKSFSKIF-LP 290
Cdd:COG1168 164 LL-LLcnP--HNPTGRVWTREELERLAELCERHDVLVISDEIHADLvLPGHKHTPFASLSEEAadRTITLTSPSKTFnLA 240
|
170
....*....|.
gi 1265182472 291 GLRIAAVVLPS 301
Cdd:COG1168 241 GLKASYAIIPN 251
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
104-421 |
3.28e-10 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 61.30 E-value: 3.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 104 QAIEHYKEELFTYSDQqGSYSLRVQLVKHLQnlqvfTQAERLVVVSGSQQALHLLVSMPFPNGKNnILIEQPTYFGFIES 183
Cdd:COG0079 33 EAIAAALDALNRYPDP-DATALREALAEYYG-----VPPEQVLVGNGSDELIQLLARAFLGPGDE-VLVPEPTFSEYPIA 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 184 LTLHQATAFGIELSMK-GIDLDR-LEYIFRNNDIkfFYII-PrfHNPLGHCytnFEKKKIVELAEK--YDVYIVED---- 254
Cdd:COG0079 106 ARAAGAEVVEVPLDEDfSLDLDAlLAAITERTDL--VFLCnP--NNPTGTL---LPREELEALLEAlpADGLVVVDeaya 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 255 DFLGDLD---PDAKSDPlfsfnpsgRVIYIKSFSKIF-LPGLRIAAVVlpslMNSNFLRY--KFSSDFNSSALSQGALEI 328
Cdd:COG0079 179 EFVPEEDsalPLLARYP--------NLVVLRTFSKAYgLAGLRLGYAI----ASPELIAAlrRVRGPWNVNSLAQAAALA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 329 YLKSgmfTSHLKKIKEVYHTKMQTLVEACD-LLLPAHthfskPTSGFYLSISLPEhvTAKQIVHMLNEQHIYVDDASRFF 407
Cdd:COG0079 247 ALED---RAYLEETRARLRAERERLAAALRaLGLTVY-----PSQANFVLVRVPE--DAAELFEALLERGILVRDFSSFG 316
|
330
....*....|....
gi 1265182472 408 LPEYkrdtlLRLSI 421
Cdd:COG0079 317 LPDY-----LRITV 325
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
104-381 |
8.54e-10 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 60.25 E-value: 8.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 104 QAIEHYKEELFTYSDQQGSYSLRVQLVKHLQNLQVFTQAERLVVVSGSQQALhLLVSMPFPNGKNNILIEQP---TYFGF 180
Cdd:PRK07568 50 EAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAI-LFAMMAICDPGDEILVPEPfyaNYNGF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 181 iesltlhqATAFGIELsmKGIdLDRLEYIFRNNDIKFF--YIIPRFH--------NPLGHCYTNFEKKKIVELAEKYDVY 250
Cdd:PRK07568 129 --------ATSAGVKI--VPV-TTKIEEGFHLPSKEEIekLITPKTKailisnpgNPTGVVYTKEELEMLAEIAKKHDLF 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 251 IVED----DFLGDldpDAKSDPLFSF-NPSGRVIYIKSFSKIF-LPGLRIAAVVL--PSLMNSNFlrykfssDFNSSALS 322
Cdd:PRK07568 198 LISDevyrEFVYD---GLKYTSALSLeGLEDRVIIIDSVSKRYsACGARIGCLISknKELIAAAM-------KLCQARLS 267
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1265182472 323 QGALEIYLKSGMFT---SHLKKIKEVYHTKMQTLVEAcdllLPAH--THFSKPTSGFYLSISLP 381
Cdd:PRK07568 268 PPTLEQIGAAALLDtpeSYFDEVREEYKKRRDILYEE----LNKIpgVVCEKPKGAFYIIAKLP 327
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
116-418 |
1.12e-09 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 60.18 E-value: 1.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 116 YSDQQGSYSLRVQLVKHLQNLQVFTQAERLVVVSGSQQALHLLVSMpFPNGKNNILIEQPtyfGFIESLTLhqATAFGIE 195
Cdd:TIGR01264 69 YAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAA-LANAGQNILVPRP---GFPLYETL--AESMGIE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 196 LSMKG--------IDLDRLEYIFrnnDIKFFYIIprFHNPLGHCYTNFEKK---KIVELAEKYDVYIVEDDFLGDLD-PD 263
Cdd:TIGR01264 143 VKLYNllpdksweIDLKQLESLI---DEKTAALI--VNNPSNPCGSVFSRQhleEILAVAERQCLPIIADEIYGDMVfSG 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 264 AKSDPLFSFNPSGRVIYIKSFSKIFL-PGLRIAAVVLPSLMNS-----NFLRYKFSSDFNSSALSQGALEIYLksgmfts 337
Cdd:TIGR01264 218 ATFEPLASLSSTVPILSCGGLAKRWLvPGWRLGWIIIHDRRGIlrdirDGLVKLSQRILGPCTIVQGALPSIL------- 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 338 hLKKIKEVYHTKMQTLVEACDLLLPAHTHF-----SKPTSGFYL--SISLPEHVTAKQIVH----MLNEQHIYVDDASRF 406
Cdd:TIGR01264 291 -LRTPQEYFDGTLSVLESNAMLCYGALAAVpglrpVMPSGAMYMmvGIEMEHFPEFKNDVEfterLVAEQSVFCLPGSCF 369
|
330
....*....|..
gi 1265182472 407 FLPEYKRDTLLR 418
Cdd:TIGR01264 370 EYPGFFRVVLTV 381
|
|
| PRK06348 |
PRK06348 |
pyridoxal phosphate-dependent aminotransferase; |
79-400 |
4.73e-09 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180537 Cd Length: 384 Bit Score: 57.81 E-value: 4.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 79 EVIDFLSAGPDknvmpYLEFQHCINQAIEHYKEELFTYSDQQGSYSLRVQLVKHLQ-NLQVFTQAERLVVVSGSQQALHL 157
Cdd:PRK06348 30 DIIDLSLGDPD-----LITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSkNYDLSFKRNEIMATVGACHGMYL 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 158 LVSMPFPNGkNNILIEQPTYFGFIESLTLHQATAFGIELSMK---GIDLDRLEYIFrNNDIKFFyIIPRFHNPLGHCYTN 234
Cdd:PRK06348 105 ALQSILDPG-DEVIIHEPYFTPYKDQIEMVGGKPIILETYEEdgfQINVKKLEALI-TSKTKAI-ILNSPNNPTGAVFSK 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 235 FEKKKIVELAEKYDVYIVEDD------FLGDLDPDAKSDPLfsfnpSGRVIYIKSFSKIF-LPGLRIAAVVLPSLMNSNF 307
Cdd:PRK06348 182 ETLEEIAKIAIEYDLFIISDEvydgfsFYEDFVPMATLAGM-----PERTITFGSFSKDFaMTGWRIGYVIAPDYIIETA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 308 LRYKFSSDFNSSALSQGALEIYLKsgMFTSHLKKIKEVYHTKMQTLVEACDLL--LPAHthfsKPTSGFYLSISLPE-HV 384
Cdd:PRK06348 257 KIINEGICFSAPTISQRAAIYALK--HRDTIVPLIKEEFQKRLEYAYKRIESIpnLSLH----PPKGSIYAFINIKKtGL 330
|
330
....*....|....*..
gi 1265182472 385 TAKQIV-HMLNEQHIYV 400
Cdd:PRK06348 331 SSVEFCeKLLKEAHVLV 347
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
116-299 |
1.06e-08 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 56.96 E-value: 1.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 116 YSDQQGSYSLRVQLVKHL-QNLQVFTQAERLVVVSGSQQALHLLVSMpFPNGKNNILIEQPTYfgfieSLTLHQATAFGI 194
Cdd:TIGR01265 69 YAPSVGALAAREAVAEYLsSDLPGKLTADDVVLTSGCSQAIEICIEA-LANPGANILVPRPGF-----PLYDTRAAFSGL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 195 E------LSMKG--IDLDRLEYIFRNNDIKFFYIIPrfHNPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGDLD-PDAK 265
Cdd:TIGR01265 143 EvrlydlLPEKDweIDLDGLESLADEKTVAIVVINP--SNPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVfGDAP 220
|
170 180 190
....*....|....*....|....*....|....*
gi 1265182472 266 SDPLFSFNPSGRVIYIKSFSKIFL-PGLRIAAVVL 299
Cdd:TIGR01265 221 FIPMASFASIVPVLSLGGISKRWVvPGWRLGWIII 255
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
4-67 |
3.37e-08 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 49.92 E-value: 3.37e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1265182472 4 KYLKIMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYV 67
Cdd:pfam00392 1 LYEQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTFV 64
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
102-301 |
6.18e-07 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 51.42 E-value: 6.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 102 INQAIEHYKEELFT-YSDQQGSYSLRVQLVKHLQNL-QVFTQAERLVVVSGSQQALHLLVSMPFPNGkNNILIEQPTYFG 179
Cdd:PRK08361 51 IKEAAKRALDEGWThYTPNAGIPELREAIAEYYKKFyGVDVDVDNVIVTAGAYEATYLAFESLLEEG-DEVIIPDPAFVC 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 180 FIESLTLHQATAFGIELSMKG---IDLDRL-EYIFRNNDIkffYIIPRFHNPLGHCYTNFEKKKIVELAEKYDVYIVEDD 255
Cdd:PRK08361 130 YVEDAKIAEAKPIRIPLREENefqPDPDELlELITKRTRM---IVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDE 206
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1265182472 256 ----FLGDldpDAKSDPLFSFNPSGrVIYIKSFSKIF-LPGLRIAAVVLPS 301
Cdd:PRK08361 207 pyehFLYE---GAKHYPMIKYAPDN-TILANSFSKTFaMTGWRLGFVIAPE 253
|
|
| PRK06207 |
PRK06207 |
pyridoxal phosphate-dependent aminotransferase; |
116-254 |
7.68e-06 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235742 Cd Length: 405 Bit Score: 47.84 E-value: 7.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 116 YSDQQGSYSLRVQLVKHLQNlqvFTQA-----ERLVVVSGSQQALHLLVSMPFPNGkNNILIEQPTYFGFIESLTLHQAT 190
Cdd:PRK06207 74 YTEYRGDADIRELLAARLAA---FTGApvdaaDELIITPGTQGALFLAVAATVARG-DKVAIVQPDYFANRKLVEFFEGE 149
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 191 AFGIEL------SMKGIDLDRLEYIFRNNDIKFFYIIPrfHNPLGHCYTNFEKKKIVELAEKYDVYIVED 254
Cdd:PRK06207 150 MVPVQLdylsadKRAGLDLDQLEEAFKAGVRVFLFSNP--NNPAGVVYSAEEIAQIAALARRYGATVIVD 217
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
111-375 |
1.57e-05 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 47.04 E-value: 1.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 111 EELFT-YSDQQGSYSLRVQLVKHL-QNLQV-FTQAERLVVVSGSQQALHLLVSMPFPNGKNNILIEqPTYFGFIESLTLH 187
Cdd:PRK07682 47 EQGYTsYTANAGLLELRQEIAKYLkKRFAVsYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVE-PSFVSYAPLVTLA 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 188 QATAFGIELSMKG---IDLDRLEYIF--RNNDIkffyIIPRFHNPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGDLDP 262
Cdd:PRK07682 126 GGVPVPVATTLENefkVQPAQIEAAItaKTKAI----LLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTY 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 263 DaksDPLFSF----NPSGRVIYIKSFSKIF-LPGLRIAAVVLPSLMNSNFLRYKFSSDFNSSALSQ-GALEIyLKSGMft 336
Cdd:PRK07682 202 D---EAYTSFasikGMRERTILISGFSKGFaMTGWRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQfAALEA-LRAGN-- 275
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1265182472 337 SHLKKIKEVYHTKMQTLVEACDLL-LPAHThfskPTSGFY 375
Cdd:PRK07682 276 DDVIRMRDSYRKRRNFFVTSFNEIgLTCHV----PGGAFY 311
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
116-390 |
4.88e-05 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 45.32 E-value: 4.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 116 YSDQQGSYSLRVQLVKHLQNL-QVFTQAERLVVVSGSQQALHLLVSMPFPNGkNNILIEQPTYFGFIESLTLHQATAFGI 194
Cdd:PRK06108 57 YTHNLGIPELREALARYVSRLhGVATPPERIAVTSSGVQALMLAAQALVGPG-DEVVAVTPLWPNLVAAPKILGARVVCV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 195 ELSMKG----IDLDRLE--------YIFRNNdikffyiiPrfHNPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGdldp 262
Cdd:PRK06108 136 PLDFGGggwtLDLDRLLaaitprtrALFINS--------P--NNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE---- 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 263 daksdpLFSFNPSG-------------RVIYIKSFSKIFL-PGLRIAAVVLP-SLMN--SNFLRYKFSSdfnSSALSQGA 325
Cdd:PRK06108 202 ------RLYYAPGGrapsfldiaepddRIIFVNSFSKNWAmTGWRLGWLVAPpALGQvlEKLIEYNTSC---VAQFVQRA 272
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1265182472 326 LEIYLKSG-MFTSHLkkikevyhtkMQTLVEACDLLLPA-----HTHFSKPTSGFYLSISLPEHV----TAKQIV 390
Cdd:PRK06108 273 AVAALDEGeDFVAEL----------VARLRRSRDHLVDAlralpGVEVAKPDGAMYAFFRIPGVTdslaLAKRLV 337
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
147-303 |
2.25e-04 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 43.37 E-value: 2.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 147 VVSGSQQALHLLVSMpFPNGKNNILIEQPtyfGF-IESLTlhqATAFGIE------LSMKG--IDLDRLEYIFRNNDIKF 217
Cdd:PLN02656 101 ITSGCTQAIDVALSM-LARPGANILLPRP---GFpIYELC---AAFRHLEvryvdlLPEKGweVDLDAVEALADQNTVAL 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 218 FYIIPrfHNPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGDLDPDAKS-DPLFSFNPSGRVIYIKSFSKIFL-PGLRIA 295
Cdd:PLN02656 174 VIINP--GNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPfVPMGVFGSIVPVLTLGSLSKRWIvPGWRLG 251
|
170
....*....|
gi 1265182472 296 AVVL--PSLM 303
Cdd:PLN02656 252 WFVTtdPSGS 261
|
|
| PRK08354 |
PRK08354 |
putative aminotransferase; Provisional |
95-288 |
6.49e-04 |
|
putative aminotransferase; Provisional
Pssm-ID: 169399 Cd Length: 311 Bit Score: 41.64 E-value: 6.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 95 YLEFQHCINQAIEHYKEELFTYS-DQQGSYSLRVQLVKHLQNLQvftqAERLVVVSGSQQALHLLvSMPFPNGKNNIlIE 173
Cdd:PRK08354 10 LIDFSASVNPYPPEWLDEMFERAkEISGRYTYYEWLEEEFSKLF----GEPIVITAGITEALYLI-GILALRDRKVI-IP 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 174 QPTYfGFIESLtlhqATAFGIELSMKGIDLDRLEYIFRNNDIKFFyiiPRFHNPLGHCYTNFEKKKIVELAEKYDVYIVE 253
Cdd:PRK08354 84 RHTY-GEYERV----ARFFAARIIKGPNDPEKLEELVERNSVVFF---CNPNNPDGKFYNFKELKPLLDAVEDRNALLIL 155
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1265182472 254 DDFLGDLDPDAKSDP------LFSFN-----PSGRVIYIKSFSKIF 288
Cdd:PRK08354 156 DEAFIDFVKKPESPEgeniikLRTFTksyglPGIRVGYVKGFEEAF 201
|
|
| avtA |
PRK09440 |
valine--pyruvate transaminase; Provisional |
150-437 |
6.97e-04 |
|
valine--pyruvate transaminase; Provisional
Pssm-ID: 236517 Cd Length: 416 Bit Score: 41.76 E-value: 6.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 150 GSQQALHLLVSM---PFPNGKN-NILIE-QPTYFGFIESlTLHQ----ATAFGIELSMKG-----IDLDRLEYifrNNDI 215
Cdd:PRK09440 105 GSQSAFFYLFNLfagRRADGSLkKILFPlAPEYIGYADA-GLEEdlfvSYRPNIELLPEGqfkyhVDFEHLHI---DEDT 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 216 KFfYIIPRFHNPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGDLDPD---AKSDPLFSFNpsgrVIYIKSFSKIFLPGL 292
Cdd:PRK09440 181 GA-ICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGiifSEATPLWNPN----IILCMSLSKLGLPGV 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 293 RIAAVVLP-------SLMNSNflrykfsSDFNSSALSQGALEIYLKSGmftsHLKK-----IKEVYHTKMQTLVEACDLL 360
Cdd:PRK09440 256 RCGIVIADeeiiealSNMNGI-------ISLAPGRLGPAIAAEMIESG----DLLRlsetvIRPFYRQKVQLAIALLRRY 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 361 LPA-----HthfsKPTSGFYLSISLPE-HVTAKQIVHMLNEQHIYVDDASRFFlPEYKRD-----TLLRLSISQVNTnTI 429
Cdd:PRK09440 325 LPDepcliH----KPEGAIFLWLWFKDlPITTEELYQRLKARGVLVVPGHYFF-PGLDEDwphahQCIRMNYVQDDE-EI 398
|
....*...
gi 1265182472 430 KRGIEQLA 437
Cdd:PRK09440 399 EKGIAILA 406
|
|
| PRK09764 |
PRK09764 |
GntR family transcriptional regulator; |
4-70 |
8.68e-04 |
|
GntR family transcriptional regulator;
Pssm-ID: 182065 [Multi-domain] Cd Length: 240 Bit Score: 40.97 E-value: 8.68e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1265182472 4 KYLKIMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYVVAE 70
Cdd:PRK09764 6 LYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEE 72
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
79-453 |
8.87e-04 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 41.33 E-value: 8.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 79 EVIDFLSAGPDknvMPYLEFqhcINQAIEHYKEElftysDQQGSYSLRVQLVKHLQNLQVFTQAERLVV--------VSG 150
Cdd:PRK07681 33 KMIDLSIGNPD---MPPADF---VREEMVHTANQ-----KESYGYTLSGIQEFHEAVTEYYNNTHNVILnadkevllLMG 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 151 SQQAL-HLlvSMPFPNGKNNILIEQPTYFGFIESLTLHQATAFGIELSMKGIDLDRLEYIFRNNDIKFFYIIPRF-HNPL 228
Cdd:PRK07681 102 SQDGLvHL--PMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFpGNPV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 229 GHCYTNFEKKKIVELAEKYDVYIVEDDFLGDLDPDA-KSDPLFSFNPSGRV-IYIKSFSKIF-LPGLRIAAVVLPSLMNS 305
Cdd:PRK07681 180 PAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGnKPISFLSVPGAKEVgVEINSLSKSYsLAGSRIGYMIGNEEIVR 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 306 NFLRYKFSSDFNS-SALSQGALEIYLKSGMFtshLKKIKEVYHTKMQTLVEAcdlLLPAHTHFSKPTSGFYLSISLPEHV 384
Cdd:PRK07681 260 ALTQFKSNTDYGVfLPIQKAACAALRNGAAF---CEKNRGIYQERRDTLVDG---FRTFGWNVDKPAGSMFVWAEIPKGW 333
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1265182472 385 TAKQIVHMLNEQHIYVDDASRFFLPEykRDTLLRLSISQvNTNTIKRGIEQLAQCITLIDDRKNQPIPN 453
Cdd:PRK07681 334 TSLSFAYALMDRANVVVTPGHAFGPH--GEGFVRIALVQ-DEEVLQQAVENIRNSGIFALEKVDELVKN 399
|
|
| PRK11523 |
PRK11523 |
transcriptional regulator ExuR; |
5-88 |
1.15e-03 |
|
transcriptional regulator ExuR;
Pssm-ID: 183176 [Multi-domain] Cd Length: 253 Bit Score: 40.60 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 5 YLKIMEEIKLGLATGSLIAGGKLPSVRRLSQHFSCSKNTVIKAYSELEKEHLIYSVPKSGYYVVA-EFQHRTNENEVIDF 83
Cdd:PRK11523 10 YQQLAAELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVVSnQPRHQQAADNNMEF 89
|
....*
gi 1265182472 84 LSAGP 88
Cdd:PRK11523 90 ANYGP 94
|
|
| PRK06290 |
PRK06290 |
LL-diaminopimelate aminotransferase; |
226-407 |
1.78e-03 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 235772 Cd Length: 410 Bit Score: 40.41 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 226 NPLGHCYTNFEKKKIVELAEKYDVYIVEDDFLGDLDPDAKSDPLFSFNPSGRV-IYIKSFSKIF-LPGLRIAAVVLPSLM 303
Cdd:PRK06290 190 NPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVgVEIHSLSKAYnMTGWRLAFVVGNELI 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1265182472 304 NSNFLRYKFSSDFNSSALSQGALEIYLKSGMFTshlKKIKEVYHTKMQTLVEAC-DLLLPAhthfSKPTSGFYLSISLPE 382
Cdd:PRK06290 270 VKAFATVKDNNDSGQFIAIQKAGIYALDHPEIT---EKIREKYSRRLDKLVKILnEVGFKA----EMPGGTFYLYVKAPK 342
|
170 180 190
....*....|....*....|....*....|....*.
gi 1265182472 383 HV-------TAKQIVHMLNEQHIYV----DDASRFF 407
Cdd:PRK06290 343 GTksgikfeNAEEFSQYLIKEKLIStvpwDDAGHFL 378
|
|
| |
