NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1265433492|gb|PGT51484|]
View 

preprotein translocase subunit SecG [Priestia megaterium]

Protein Classification

preprotein translocase subunit SecG( domain architecture ID 10003479)

preprotein translocase subunit SecG is involved in protein export and participates in an early event of protein translocation

Gene Symbol:  secG
Gene Ontology:  GO:0043952|GO:0009306|GO:0015450|GO:0005886
PubMed:  15546659|10732681|10066476|9184221
SCOP:  4004237

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 1-75 1.55e-16

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


:

Pssm-ID: 440925  Cd Length: 91  Bit Score: 67.13  E-value: 1.55e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1265433492  1 MHTLLITLLVIVSIALIVVVVLQSSKTTGLSGAISGG-AETLFGkqkARGIDLVLHRLTVVLSILFFVLTLAVSYF 75
Cdd:COG1314    1 MYTVLLVLHVIVAILLIGLVLLQSGKGAGLGAAFGGGaSGTLFG---ARGAANFLTRATAILAVLFFVLSLVLAYL 73
 
Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 1-75 1.55e-16

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440925  Cd Length: 91  Bit Score: 67.13  E-value: 1.55e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1265433492  1 MHTLLITLLVIVSIALIVVVVLQSSKTTGLSGAISGG-AETLFGkqkARGIDLVLHRLTVVLSILFFVLTLAVSYF 75
Cdd:COG1314    1 MYTVLLVLHVIVAILLIGLVLLQSGKGAGLGAAFGGGaSGTLFG---ARGAANFLTRATAILAVLFFVLSLVLAYL 73
SecG pfam03840
Preprotein translocase SecG subunit;
4-74 2.36e-12

Preprotein translocase SecG subunit;


Pssm-ID: 461074  Cd Length: 69  Bit Score: 55.89  E-value: 2.36e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1265433492  4 LLITLLVIVSIALIVVVVLQSSKTTGLSGAISGGAETLFGkqKARGIDLVLHRLTVVLSILFFVLTLAVSY 74
Cdd:pfam03840  1 ILLILLIIVSILLIVLVLLQSGKGAGLSGAFGGGSDSLFG--GSRGAENFLTKITAILAILFFVLSLVLAL 69
secG TIGR00810
protein translocase, SecG subunit; This family of proteins forms a complex with SecY and SecE. ...
 2-75 1.35e-09

protein translocase, SecG subunit; This family of proteins forms a complex with SecY and SecE. SecA then recruits the SecYEG complex to form an active protein translocation channel. [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 273280  Cd Length: 73  Bit Score: 49.04  E-value: 1.35e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1265433492  2 HTLLITLLVIVSIALIVVVVLQSSKTTGLSGAISGGAETLFGkqKARGIDLVLHRLTVVLSILFFVLTLAVSYF 75
Cdd:TIGR00810  1 YTVLLILHIIVAILLIVLVLLQSGKGGGLGGAFGGGASQSLF--GSRGAEKFLSRLTAVLAVLFFILSLALAYL 72
 
Name Accession Description Interval E-value
SecG COG1314
Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular ...
 1-75 1.55e-16

Protein translocase subunit SecG [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 440925  Cd Length: 91  Bit Score: 67.13  E-value: 1.55e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1265433492  1 MHTLLITLLVIVSIALIVVVVLQSSKTTGLSGAISGG-AETLFGkqkARGIDLVLHRLTVVLSILFFVLTLAVSYF 75
Cdd:COG1314    1 MYTVLLVLHVIVAILLIGLVLLQSGKGAGLGAAFGGGaSGTLFG---ARGAANFLTRATAILAVLFFVLSLVLAYL 73
SecG pfam03840
Preprotein translocase SecG subunit;
4-74 2.36e-12

Preprotein translocase SecG subunit;


Pssm-ID: 461074  Cd Length: 69  Bit Score: 55.89  E-value: 2.36e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1265433492  4 LLITLLVIVSIALIVVVVLQSSKTTGLSGAISGGAETLFGkqKARGIDLVLHRLTVVLSILFFVLTLAVSY 74
Cdd:pfam03840  1 ILLILLIIVSILLIVLVLLQSGKGAGLSGAFGGGSDSLFG--GSRGAENFLTKITAILAILFFVLSLVLAL 69
secG TIGR00810
protein translocase, SecG subunit; This family of proteins forms a complex with SecY and SecE. ...
 2-75 1.35e-09

protein translocase, SecG subunit; This family of proteins forms a complex with SecY and SecE. SecA then recruits the SecYEG complex to form an active protein translocation channel. [Protein fate, Protein and peptide secretion and trafficking]


Pssm-ID: 273280  Cd Length: 73  Bit Score: 49.04  E-value: 1.35e-09
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1265433492  2 HTLLITLLVIVSIALIVVVVLQSSKTTGLSGAISGGAETLFGkqKARGIDLVLHRLTVVLSILFFVLTLAVSYF 75
Cdd:TIGR00810  1 YTVLLILHIIVAILLIVLVLLQSGKGGGLGGAFGGGASQSLF--GSRGAEKFLSRLTAVLAVLFFILSLALAYL 72
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH