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Conserved domains on  [gi|1266290647|gb|PHB81937|]
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pentapeptide repeat-containing protein [Bacillus toyonensis]

Protein Classification

pentapeptide repeat-containing protein( domain architecture ID 11442852)

pentapeptide repeat-containing protein (PRP) adopts a beta-helical structure and may have a targeting or structural function

CATH:  2.160.20.10
PubMed:  33925937|9655353

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
185-244 5.43e-18

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


:

Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 79.21  E-value: 5.43e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 185 RGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:COG1357    95 SGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADL 154
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
185-244 5.43e-18

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 79.21  E-value: 5.43e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 185 RGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:COG1357    95 SGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADL 154
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 202-241 4.07e-12

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 59.28  E-value: 4.07e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1266290647 202 ANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTN 241
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15197 PRK15197
type III secretion system effector PipB;
164-259 2.98e-09

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 56.48  E-value: 2.98e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 164 LETSELVWKEMNATRKKRIIHRGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSI 243
Cdd:PRK15197  156 LRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAI 235

                          90       100
                  ....*....|....*....|
gi 1266290647 244 F----LTQVQINAAKGDKHT 259
Cdd:PRK15197  236 LfgsdLTDTKLNGAKLDKIA 255
 
Name Accession Description Interval E-value
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
185-244 5.43e-18

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 79.21  E-value: 5.43e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 185 RGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:COG1357    95 SGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADL 154
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
185-244 6.12e-17

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 76.52  E-value: 6.12e-17
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 185 RGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:COG1357   105 RGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANL 164
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
185-244 1.68e-16

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 75.36  E-value: 1.68e-16
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 185 RGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:COG1357   100 SGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANL 159
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
185-253 2.22e-16

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 74.98  E-value: 2.22e-16
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1266290647 185 RGADLM---GANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIF----LTQVQINAA 253
Cdd:COG1357    82 SGANLAnlsGANLSGANLSGANLRGANLSGANLSGADLSGADLSGANLSGADLSGANLSGANLsgadLSGADLSGA 157
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
185-241 5.44e-16

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 73.82  E-value: 5.44e-16
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1266290647 185 RGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTN 241
Cdd:COG1357   110 SGANLSGADLSGADLSGANLSGADLSGANLSGANLSGADLSGADLSGANLSGANLSG 166
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
185-251 1.99e-13

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 66.89  E-value: 1.99e-13
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1266290647 185 RGADL----MGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIFLTQVQIN 251
Cdd:COG1357    23 SGANLsgalSGANLSGANLSGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANLANLSGAN 93
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
180-244 4.53e-13

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 65.73  E-value: 4.53e-13
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1266290647 180 KRIIHRGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLI---GADLRDADIRGADFTNSIF 244
Cdd:COG1357    42 SGANLTGANLSGADLSGADLSGANLSGADLSGANLTGADLSGANLAnlsGANLSGANLSGANLRGANL 109
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 202-241 4.07e-12

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 59.28  E-value: 4.07e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1266290647 202 ANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTN 241
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 198-236 5.23e-11

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 56.19  E-value: 5.23e-11
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 1266290647 198 NLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRG 236
Cdd:pfam00805   2 NLSGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 187-224 1.27e-09

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 52.34  E-value: 1.27e-09
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1266290647 187 ADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADL 224
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADLSGANL 38
PRK15197 PRK15197
type III secretion system effector PipB;
164-259 2.98e-09

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 56.48  E-value: 2.98e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 164 LETSELVWKEMNATRKKRIIHRGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSI 243
Cdd:PRK15197  156 LRGVNLAHKDFQGEDLSDIDASNADFRETTLSNVNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAI 235

                          90       100
                  ....*....|....*....|
gi 1266290647 244 F----LTQVQINAAKGDKHT 259
Cdd:PRK15197  236 LfgsdLTDTKLNGAKLDKIA 255
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 185-221 3.63e-08

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 48.49  E-value: 3.63e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
gi 1266290647 185 RGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRG 221
Cdd:pfam00805   4 SGANLSGANLSGANLSGANLTGANLSGADLSGANLSG 40
PRK15196 PRK15196
type III secretion system effector PipB2;
185-243 4.73e-08

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 53.09  E-value: 4.73e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1266290647 185 RGADLMGANLKKKNL-----QGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSI 243
Cdd:PRK15196  155 KGAVLTGANLTAENLcdadlSGANLEGAVLFMADCEGANFKGANLSGTSLGDSNFKNACLEDSI 218
Pentapeptide pfam00805
Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The ...
 212-244 2.19e-07

Pentapeptide repeats (8 copies); These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.


Pssm-ID: 459943 [Multi-domain]  Cd Length: 40  Bit Score: 46.18  E-value: 2.19e-07
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1266290647 212 ANLNGADLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:pfam00805   1 ANLSGANLSGANLSGANLSGANLTGANLSGADL 33
YjbI COG1357
Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];
198-244 4.60e-07

Uncharacterized conserved protein YjbI, contains pentapeptide repeats [Function unknown];


Pssm-ID: 440968 [Multi-domain]  Cd Length: 178  Bit Score: 48.78  E-value: 4.60e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1266290647 198 NLQGANLRGAYLIAANLNGADLRGADLIGAdLRDADIRGADFTNSIF 244
Cdd:COG1357     1 DLSGADLSGADLSGADLSGADLSGANLSGA-LSGANLSGANLSGANL 46
PRK15196 PRK15196
type III secretion system effector PipB2;
186-241 1.08e-06

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 49.23  E-value: 1.08e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1266290647 186 GADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTN 241
Cdd:PRK15196  266 RADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKD 321
PRK15196 PRK15196
type III secretion system effector PipB2;
198-239 1.83e-06

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 48.46  E-value: 1.83e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1266290647 198 NLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADF 239
Cdd:PRK15196  153 NLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANF 194
PRK15197 PRK15197
type III secretion system effector PipB;
187-262 5.56e-06

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 46.85  E-value: 5.56e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1266290647 187 ADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIFLTQVQInaaKGDKHTKLP 262
Cdd:PRK15197  204 VNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSDLTDTKLNGAKLDKIALTLAKALTGADL---TGSQHTPTP 276
PRK15196 PRK15196
type III secretion system effector PipB2;
187-244 7.95e-06

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 46.54  E-value: 7.95e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1266290647 187 ADLMGANLKKKNLQGANLRGAYLIAANLNGA-----DLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:PRK15196  257 TNLSGATLIRADMSGATLQGATIMAAIMEGAvltraNLRKASFISTNLDGADLAEANLNNTCF 319
PRK15196 PRK15196
type III secretion system effector PipB2;
185-242 1.07e-05

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 46.15  E-value: 1.07e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1266290647 185 RGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRD---ADIRGADFTNS 242
Cdd:PRK15196  275 QGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDctlTHLRTEDATMS 335
PRK15196 PRK15196
type III secretion system effector PipB2;
174-253 1.35e-05

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 45.77  E-value: 1.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 174 MNATRKKRIIHrGADLMGANLKKKNLQGANLRGAYLIAANLNGAD-----LRGADLIGADLRDADIRGADFTNSIF---- 244
Cdd:PRK15196  210 KNACLEDSIMC-GATLDHANLTGANLQHASLLGCSMIECNCSGANmdhtnLSGATLIRADMSGATLQGATIMAAIMegav 288


                  ....*....
gi 1266290647 245 LTQVQINAA 253
Cdd:PRK15196  289 LTRANLRKA 297
PRK15196 PRK15196
type III secretion system effector PipB2;
191-242 2.14e-05

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 45.00  E-value: 2.14e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1266290647 191 GANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNS 242
Cdd:PRK15196  151 GMNLKGAVLTGANLTAENLCDADLSGANLEGAVLFMADCEGANFKGANLSGT 202
PRK15197 PRK15197
type III secretion system effector PipB;
188-253 2.96e-05

type III secretion system effector PipB;


Pssm-ID: 185119 [Multi-domain]  Cd Length: 291  Bit Score: 44.53  E-value: 2.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 188 DLMGANLKKKNLQG----------ANLRGA-----YLIAANLNGADLRGADLIGADLRDADIRGADFTNSiFLTQVQINA 252
Cdd:PRK15197  155 NLRGVNLAHKDFQGedlsdidasnADFRETtlsnvNLVGANLCCANLHAVNLMGSNMTKANLTHADLTCA-NMSGVNLTA 233


                  .
gi 1266290647 253 A 253
Cdd:PRK15197  234 A 234
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
186-244 4.88e-05

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 40.72  E-value: 4.88e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1266290647 186 GADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:pfam13599  10 GCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQFSGCNLKNSNF 68
PRK15196 PRK15196
type III secretion system effector PipB2;
188-242 1.22e-04

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 42.69  E-value: 1.22e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1266290647 188 DLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNS 242
Cdd:PRK15196  248 NCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFIST 302
PRK15196 PRK15196
type III secretion system effector PipB2;
185-241 2.93e-04

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 41.53  E-value: 2.93e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1266290647 185 RGADLMGANLKKKNLQGANLR-----GAYLIAANLNGADLRGADLIGADLRDADIRGA--DFTN 241
Cdd:PRK15196  195 KGANLSGTSLGDSNFKNACLEdsimcGATLDHANLTGANLQHASLLGCSMIECNCSGAnmDHTN 258
PRK15196 PRK15196
type III secretion system effector PipB2;
186-245 6.82e-04

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 40.37  E-value: 6.82e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266290647 186 GADLMGANLKKK----------NLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIFL 245
Cdd:PRK15196  171 DADLSGANLEGAvlfmadcegaNFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASLL 240
PRK15196 PRK15196
type III secretion system effector PipB2;
183-244 1.75e-03

type III secretion system effector PipB2;


Pssm-ID: 185118 [Multi-domain]  Cd Length: 350  Bit Score: 39.22  E-value: 1.75e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1266290647 183 IHRGADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLigADLRDADIRGADFTNSIF 244
Cdd:PRK15196  283 IMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTL--THLRTEDATMSTSTQTLF 342
Pentapeptide_4 pfam13599
Pentapeptide repeats (9 copies);
187-244 2.21e-03

Pentapeptide repeats (9 copies);


Pssm-ID: 433339 [Multi-domain]  Cd Length: 78  Bit Score: 36.10  E-value: 2.21e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1266290647 187 ADLMGANLKKKNLQGANLRGAYLIAANLNGADLRGADLIGADLRDADIRGADFTNSIF 244
Cdd:pfam13599   1 ADFTRCSFEGCKLSGTEFYHATLKDCNFTECNLVNVNFDDCNLRDVDFLEAQLKNAQF 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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