|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
4-479 |
4.64e-174 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 497.43 E-value: 4.64e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 4 LVWKPDMSLASPLYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVvnnN 83
Cdd:COG1167 1 MLIRLDRDSSGPLYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFV---A 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 84 ENTSTYAPPPNWQSYVETglhypnlPAIQDINQAEfyPHVIRLGTGELAPSLLPEKKMKLIMNKLLQ--SNVPLGYEEPK 161
Cdd:COG1167 78 ARLPAPAPAPRAAAAVAA-------PALRRLLEAA--PGVIDLGSGAPDPDLFPLAALRRALRRALRrlPPALLGYGDPQ 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 162 GNLYLREKIAGYLKGHGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPMDENGL 241
Cdd:COG1167 149 GLPELREAIARYLARRGVPASPDQILITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVDEDGL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 242 NASYIAKYKKQFNASILYTIPSFHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKNGIVLH 321
Cdd:COG1167 229 DLDALEAALRRHRPRAVYVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPPPPLAALDAPGRVIY 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 322 IGSMSKVISPGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFTNGLYDEHLQFVRNELKKRRDFMLHMLEKY 401
Cdd:COG1167 309 IGSFSKTLAPGLRLGYLVAPGRLIERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARH 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 402 CREIATWYEPTGGFYIWLHMNVPVSNRSLFDKALQEKILLNPGTLY--DRSANQFLRLSYSYATLEEIEIGIKKLAQLIK 479
Cdd:COG1167 389 LPDGLRVTGPPGGLHLWLELPEGVDAEALAAAALARGILVAPGSAFsaDGPPRNGLRLGFGAPSEEELEEALRRLAELLR 468
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
124-476 |
1.84e-81 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 256.11 E-value: 1.84e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 124 IRLGTGELAPSLLPEKKMKLIMNKLLQSNvpLGYEEPKGNLYLREKIAGYLKG-HGVYVSPDSILIVSGAIQALQLISMG 202
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGL--LGYYPDPGLPELREAIAEWLGRrGGVDVPPEEIVVTNGAQEALSLLLRA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 203 LLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPMDENG--LNASYIAKYKKQFNASILYTIPsFHNPTNFSMNAEKRKEV 280
Cdd:cd00609 79 LLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGgfLLDLELLEAAKTPKTKLLYLNN-PNNPTGAVLSEEELEEL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 281 MEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVGP-ESVIQRLADIKMQTDYG 358
Cdd:cd00609 158 AELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGlPGLRIGYLIAPpEELLERLKKLLPYTTSG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 359 SSSISQQIAAEWFTNGlyDEHLQFVRNELKKRRDFMLHMLEKYCREIATwyEPTGGFYIWLHMNVPVSNRSLFDKALQEK 438
Cdd:cd00609 238 PSTLSQAAAAAALDDG--EEHLEELRERYRRRRDALLEALKELGPLVVV--KPSGGFFLWLDLPEGDDEEFLERLLLEAG 313
|
330 340 350
....*....|....*....|....*....|....*...
gi 1266725804 439 ILLNPGTLYDRSANQFLRLSYSYATlEEIEIGIKKLAQ 476
Cdd:cd00609 314 VVVRPGSAFGEGGEGFVRLSFATPE-EELEEALERLAE 350
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
121-479 |
1.61e-50 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 176.47 E-value: 1.61e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 121 PHVIRLGTGElaPSLLPEKKMKLIMNKLLQSNVpLGYEEPKGNLYLREKIAGYLKGH-GVYVSPDSILIVSGAIQALQLI 199
Cdd:COG0436 30 EDVIDLGIGE--PDFPTPDHIREAAIEALDDGV-TGYTPSAGIPELREAIAAYYKRRyGVDLDPDEILVTNGAKEALALA 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 200 SMGLLPKGASILLEKPSY-LYSlNVFQSAGMRLIGIPMD-ENG--LNASYIAKYKKQfNASILYtIPSFHNPTNFSMNAE 275
Cdd:COG0436 107 LLALLNPGDEVLVPDPGYpSYR-AAVRLAGGKPVPVPLDeENGflPDPEALEAAITP-RTKAIV-LNSPNNPTGAVYSRE 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 276 KRKEVMEICNEIGLPIIEDAVYQDLWFD--EPVSkPLKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIK 352
Cdd:COG0436 184 ELEALAELAREHDLLVISDEIYEELVYDgaEHVS-ILSLPGLKDRTIVINSFSKSYAmTGWRIGYAVGPPELIAALLKLQ 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 353 MQTDYGSSSISQQIAAEWFTNGlyDEHLQFVRNELKKRRDFMLHMLEK---YCReiatwyEPTGGFYIWLhmNVPVSNRS 429
Cdd:COG0436 263 SNLTSCAPTPAQYAAAAALEGP--QDYVEEMRAEYRRRRDLLVEGLNEiglSVV------KPEGAFYLFA--DVPELGLD 332
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1266725804 430 LFD--KAL--QEKILLNPGTLYDRSANQFLRLSYSyATLEEIEIGIKKLAQLIK 479
Cdd:COG0436 333 SEEfaERLleEAGVAVVPGSAFGPAGEGYVRISYA-TSEERLEEALERLARFLE 385
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
121-474 |
3.94e-33 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 128.58 E-value: 3.94e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 121 PHVIRLGTGElaPSLLPEKKMKLIMNKLLQSNVPLGYEEPKGNLYLREKIAGYLKGHGV--YVSPDSILIVSGAIQALQL 198
Cdd:pfam00155 1 TDKINLGSNE--YLGDTLPAVAKAEKDALAGGTRNLYGPTDGHPELREALAKFLGRSPVlkLDREAAVVFGSGAGANIEA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 199 ISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPM-DENGLNA---SYIAKYKKqfnASILYTIPSFHNPTNFSMNA 274
Cdd:pfam00155 79 LIFLLANPGDAILVPAPTYASYIRIARLAGGEVVRYPLyDSNDFHLdfdALEAALKE---KPKVVLHTSPHNPTGTVATL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 275 EKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKNGIVLHI-GSMSKVIS-PGLRIGWIVGPESVIQRLAdiK 352
Cdd:pfam00155 156 EELEKLLDLAKEHNILLLVDEAYAGFVFGSPDAVATRALLAEGPNLLVvGSFSKAFGlAGWRVGYILGNAAVISQLR--K 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 353 MQTDYGSSSISQQIAAEWFTN-GLYDEHLQFVRNELKKRRDFMLHMLEKycREIaTWYEPTGGFYIWLHMNvPVSNRSLF 431
Cdd:pfam00155 234 LARPFYSSTHLQAAAAAALSDpLLVASELEEMRQRIKERRDYLRDGLQA--AGL-SVLPSQAGFFLLTGLD-PETAKELA 309
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1266725804 432 DKALQE-KILLNPGTLYDRSAnqFLRLSYSYATLEEIEIGIKKL 474
Cdd:pfam00155 310 QVLLEEvGVYVTPGSSPGVPG--WLRITVAGGTEEELEELLEAI 351
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
166-479 |
2.33e-26 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 110.21 E-value: 2.33e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 166 LREKIAGYLKG-HGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYL-YSlNVFQSAGMRLIGIPMD-ENG-- 240
Cdd:PRK05764 73 LREAIAAKLKRdNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVsYP-EMVKLAGGVPVFVPTGeENGfk 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 241 -----LNASYIAKYKkqfnaSILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDE-----PVSKPL 310
Cdd:PRK05764 152 ltveqLEAAITPKTK-----ALILNSPS--NPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGaeftsIASLSP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 311 KAYDKngiVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFTNGlyDEHLQFVRNELKK 389
Cdd:PRK05764 225 ELRDR---TITVNGFSKAYAmTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGP--QDEVEEMRQAFEE 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 390 RRDFMLHMLekycREIA--TWYEPTGGFYIWlhMNV-PVSNRSLF-DKALQEKILLN------PGTLYDrsANQFLRLsy 459
Cdd:PRK05764 300 RRDLMVDGL----NEIPglECPKPEGAFYVF--PNVsKLLGKSITdSLEFAEALLEEagvavvPGIAFG--APGYVRL-- 369
|
330 340
....*....|....*....|.
gi 1266725804 460 SYAT-LEEIEIGIKKLAQLIK 479
Cdd:PRK05764 370 SYATsLEDLEEGLERIERFLE 390
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
109-479 |
2.34e-26 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 110.20 E-value: 2.34e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 109 PAIQDI---------NQAEFYPHVIRLGTGElaPSLLPEKKMKLIMNKLLQSNVPlGYEEPKGNLYLREKIAGYLKG-HG 178
Cdd:PRK07683 7 PRVKDIqisgirqfsNMVQNYDNLISLTIGQ--PDFPTPSHVKEAAKRAITENYT-SYTHNAGLLELRKAACNFVKDkYD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 179 VYVSPDS-ILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPMDENG--LNASYIAKYKKQFNA 255
Cdd:PRK07683 84 LHYSPESeIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGfrLTAEALENAITEKTR 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 256 SILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEP---VSKPLKAYDKNgIVlhIGSMSKVIS-P 331
Cdd:PRK07683 164 CVVLPYPS--NPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPhtsIAHFPEMREKT-IV--INGLSKSHSmT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 332 GLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFTNGlyDEHLQFVRNELKKRRDFMLHMLEKYCREIAtwyEP 411
Cdd:PRK07683 239 GWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAG--KDDAKMMRHQYKKRRDYVYNRLISMGLDVE---KP 313
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1266725804 412 TGGFYIWlhMNVPVSNRSLFDKAL----QEKILLNPGTLYDRSANQFLRLSYSYaTLEEIEIGIKKLAQLIK 479
Cdd:PRK07683 314 TGAFYLF--PSIGHFTMSSFDFALdlveEAGLAVVPGSAFSEYGEGYVRLSYAY-SIETLKEGLDRLEAFLQ 382
|
|
| PRK07337 |
PRK07337 |
pyridoxal phosphate-dependent aminotransferase; |
122-466 |
3.58e-24 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180937 Cd Length: 388 Bit Score: 103.99 E-value: 3.58e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 122 HVIRLGTGE---LAPSLLPEKKMKLIMNKLLQSNVPLGYEEpkgnlyLREKIAG-YLKGHGVYVSPDSILIVSGAIQALQ 197
Cdd:PRK07337 31 DIIHMGIGEpdfTAPEPVVEAAARALRRGVTQYTSALGLAP------LREAIAAwYARRFGLDVAPERIVVTAGASAALL 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 198 LISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIP--------MDENGLNASYIAKYKKQFNASilytiPSfhNPTN 269
Cdd:PRK07337 105 LACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPsgpaerfqLTAADVEAAWGERTRGVLLAS-----PS--NPTG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 270 FSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLkAYDKNgiVLHIGSMSKVIS-PGLRIGWIVGPES---VI 345
Cdd:PRK07337 178 TSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSAL-SLGDD--VITINSFSKYFNmTGWRLGWLVVPEAlvgTF 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 346 QRLAdikmQTDY-GSSSISQQIAAEWF---TNGLYDEHlqfvRNELKKRRDFMLHMLEKYCREIATwyEPTGGFYIWL-- 419
Cdd:PRK07337 255 EKLA----QNLFiCASALAQHAALACFepdTLAIYERR----RAEFKRRRDFIVPALESLGFKVPV--MPDGAFYVYAdc 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1266725804 420 ----HMNVPVSNRSLFDKALQEKILLNPGTLYDRSANQ-FLRLSY--SYATLEE 466
Cdd:PRK07337 325 rgvaHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRdYIRLSYatSMSRLEE 378
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
116-458 |
1.30e-23 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 101.36 E-value: 1.30e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 116 QAEFYPHVIRLGTGE--LAPsllPEKKMKLIMNKLLQSNVplgYEEPkGNLYLREKIAGYlkgHGVyvSPDSILIVSGAI 193
Cdd:COG0079 8 PIEEPEDIIKLSSNEnpYGP---PPKVLEAIAAALDALNR---YPDP-DATALREALAEY---YGV--PPEQVLVGNGSD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 194 QALQLISMGLLPKGASILLEKPSY-LYSLNVfQSAGMRLIGIPMDEN-GLN-ASYIAKYKKQfnASILYtIPSFHNPTNF 270
Cdd:COG0079 76 ELIQLLARAFLGPGDEVLVPEPTFsEYPIAA-RAAGAEVVEVPLDEDfSLDlDALLAAITER--TDLVF-LCNPNNPTGT 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 271 SMNAEKRKEVMEICNEIGLPIIeDAVYQDlwF-DEPVS--KPLKAYDkNGIVLHigSMSKVIS-PGLRIGWIVGPESVIQ 346
Cdd:COG0079 152 LLPREELEALLEALPADGLVVV-DEAYAE--FvPEEDSalPLLARYP-NLVVLR--TFSKAYGlAGLRLGYAIASPELIA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 347 RLAdiKMQTDYGSSSISQQIAAEWFTNglyDEHLQFVRNELKKRRDFMLHMLEKycREIATWyePTGGFYIWLHmnVPVS 426
Cdd:COG0079 226 ALR--RVRGPWNVNSLAQAAALAALED---RAYLEETRARLRAERERLAAALRA--LGLTVY--PSQANFVLVR--VPED 294
|
330 340 350
....*....|....*....|....*....|..
gi 1266725804 427 NRSLFDKALQEKILLNPGTLYDrsANQFLRLS 458
Cdd:COG0079 295 AAELFEALLERGILVRDFSSFG--LPDYLRIT 324
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
162-475 |
2.92e-23 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 101.34 E-value: 2.92e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 162 GNLYLREKIAGYLKG--HGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPMDEN 239
Cdd:PRK07309 68 GLLELRQAAADFVKEkyNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTEN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 240 G-------LNASyIAKYKKQFNASILyTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDL-WFDEP-VSKPL 310
Cdd:PRK07309 148 DfvltpemLEKA-ILEQGDKLKAVIL-NYPA--NPTGVTYSREQIKALADVLKKYDIFVISDEVYSELtYTGEPhVSIAE 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 311 KAYDkNGIVLHIGSMSKVISpGLRIGWIVGPESVIqrlADIKMQTDY---GSSSISQQIAAEWFTNGLYDEhlQFVRNEL 387
Cdd:PRK07309 224 YLPD-QTILINGLSKSHAMT-GWRIGLIFAPAEFT---AQLIKSHQYlvtAATTMAQFAAVEALTNGKDDA--LPMKKEY 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 388 KKRRDFMLHMLEKYCREIAtwyEPTGGFYIWlhMNVPV-----SNRSLFDKALQEKILLNPGTLYDRSANQFLRLSYSyA 462
Cdd:PRK07309 297 IKRRDYIIEKMTDLGFKII---KPDGAFYIF--AKIPAgynqdSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA-A 370
|
330
....*....|...
gi 1266725804 463 TLEEIEIGIKKLA 475
Cdd:PRK07309 371 SMETIKEAMKRLK 383
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
13-423 |
1.10e-21 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 97.04 E-value: 1.10e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 13 ASPLYKQIETYIKErivnGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNnnentstyAPP 92
Cdd:PRK15481 7 ANEIFDSIRQLIQA----GRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRG--------SPS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 93 PNWQsyvETGLhyPNLPaiqdinqaefyphVIRLGTGELAPSLLPEkkmkliMNKLLQ--SNVPLGYEEPKGNLYLREKI 170
Cdd:PRK15481 75 PVAL---EGGD--PGTP-------------LHDLAGGNPDPQRLPD------LSRYFArlSRTPRLYGDAPVSPELHAWA 130
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 171 AGYLKGHgvYVSPDSILIVSGAIQALQ-LISMGLLPkGASILLEKPSYLYSLNVFQSAGMRLIGIPMDENGLNASYIAKY 249
Cdd:PRK15481 131 ARWLRDD--CPVAFEIDLTSGAIDAIErLLCAHLLP-GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAEGMQPEKLERA 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 250 KKQFNASILYTiPSFHNPTNFSMNAEKRKEVMEICNEIG--LPIIEDavYQDLWFDEPVSKPLKAYDKNGIVlhIGSMSK 327
Cdd:PRK15481 208 LAQGARAVILT-PRAHNPTGCSLSARRAAALRNLLARYPqvLVIIDD--HFALLSSSPYHSVIPQTTQRWAL--IRSVSK 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 328 VISPGLRIGWIVGPESVIQRLadiKMQTDYGSSSIS---QQIAAEWFTNGLYDEHLQFVRNELKKRRDFMLHMLEKYCRE 404
Cdd:PRK15481 283 ALGPDLRLAFVASDSATSARL---RLRLNSGTQWVShllQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIA 359
|
410
....*....|....*....
gi 1266725804 405 IATwyePTGGFYIWLHMNV 423
Cdd:PRK15481 360 IPS---PGDGLNLWLPLDT 375
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
15-79 |
3.45e-21 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 86.73 E-value: 3.45e-21
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1266725804 15 PLYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIV 79
Cdd:cd07377 1 PLYEQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFV 65
|
|
| PRK08363 |
PRK08363 |
alanine aminotransferase; Validated |
157-447 |
1.75e-20 |
|
alanine aminotransferase; Validated
Pssm-ID: 181402 Cd Length: 398 Bit Score: 93.33 E-value: 1.75e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 157 YEEPKGNLYLREKIAGYLKG-HGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSY-LYSLNVFQSAGMRLIGI 234
Cdd:PRK08363 66 YGPSEGLPELREAIVKREKRkNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYpPYTGLVKFYGGVPVEYR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 235 PMDENGLNASYIAKYKKQFNASILYTIPSFHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLK-AY 313
Cdd:PRK08363 146 TIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSlTK 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 314 DKNGIVLHigSMSKV-ISPGLRIGWI--VGPE-------SVIQRLADIKMqtdygSSSISQQIAAEWFTNGLYDeHLQFV 383
Cdd:PRK08363 226 DVPVIVMN--GLSKVyFATGWRLGYIyfVDPEgklaevrEAIDKLARIRL-----CPNTPAQFAAIAGLTGPMD-YLEEY 297
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1266725804 384 RNELKKRRDFMLHMLEKYCREIATwyEPTGGFYIWLHMNVpvsNRSLFDKALQEKILLNPGTLY 447
Cdd:PRK08363 298 MKKLKERRDYIYKRLNEIPGISTT--KPQGAFYIFPRIEE---GPWKDDKEFVLDVLHEAHVLF 356
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
155-417 |
5.51e-20 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 91.45 E-value: 5.51e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 155 LGYEEPKGNLYLREKIAGYLKGHGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYL-YslNVF-QSAGMRLI 232
Cdd:PRK07568 60 LAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYAnY--NGFaTSAGVKIV 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 233 GIPMD-ENGLNASYIAKYKKQFNA---SILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEpvSK 308
Cdd:PRK07568 138 PVTTKiEEGFHLPSKEEIEKLITPktkAILISNPG--NPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDG--LK 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 309 PLKAYDKNGI---VLHIGSMSKVISP-GLRIGWIVGP-ESVIQ--------RLadikmqtdygSSSISQQIAAEwftnGL 375
Cdd:PRK07568 214 YTSALSLEGLedrVIIIDSVSKRYSAcGARIGCLISKnKELIAaamklcqaRL----------SPPTLEQIGAA----AL 279
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1266725804 376 YD---EHLQFVRNELKKRRDFMLHMLEKYcrEIATWYEPTGGFYI 417
Cdd:PRK07568 280 LDtpeSYFDEVREEYKKRRDILYEELNKI--PGVVCEKPKGAFYI 322
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
13-87 |
1.14e-19 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 88.00 E-value: 1.14e-19
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1266725804 13 ASPLYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNNNENTS 87
Cdd:COG2188 3 PVPLYLQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFVAEPKIEYP 77
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
166-475 |
6.67e-19 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 88.19 E-value: 6.67e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 166 LREKIAG-YLKGHGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPMDENG---L 241
Cdd:PRK08960 74 LREAIAGfYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSryqL 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 242 NASYIAKYKKQFNASILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKngiVLH 321
Cdd:PRK08960 154 TPALVERHWNADTVGALVASPA--NPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDD---AFV 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 322 IGSMSKVIS-PGLRIGWIVGPESVI---QRLAdikmQTDYGS-SSISQQIAAEWFTnglyDEHLQFV---RNELKKRRDF 393
Cdd:PRK08960 229 LNSFSKYFGmTGWRLGWLVAPPAAVpelEKLA----QNLYISaSTPAQHAALACFE----PETLAILearRAEFARRRDF 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 394 MLHMLEKYCREIATwyEPTGGFYIWLHMNVPVSNRSLFDKAL--QEKILLNPGTLYDRS-ANQFLRLSYSyATLEEIEIG 470
Cdd:PRK08960 301 LLPALRELGFGIAV--EPQGAFYLYADISAFGGDAFAFCRHFleTEHVAFTPGLDFGRHqAGQHVRFAYT-QSLPRLQEA 377
|
....*
gi 1266725804 471 IKKLA 475
Cdd:PRK08960 378 VERIA 382
|
|
| PRK07324 |
PRK07324 |
transaminase; Validated |
136-479 |
3.44e-18 |
|
transaminase; Validated
Pssm-ID: 235989 Cd Length: 373 Bit Score: 86.14 E-value: 3.44e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 136 LPEKKMKLIMNKLLQSnvPLGYEEPKGNLYLREKIAGYLKGhgvyVSPDSILIVSGAIQALQLISMGLLPKGASILLEKP 215
Cdd:PRK07324 39 LAGKNPEAFYQELGQK--KLTYGWIEGSPEFKEAVASLYQN----VKPENILQTNGATGANFLVLYALVEPGDHVISVYP 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 216 SY--LYSLNVFQSAGMRLIGIPMDENGLnaSYIAKYKKQFNASI-LYTIPSFHNPTNFSMNAEKRKEVMEICNEIGLPII 292
Cdd:PRK07324 113 TYqqLYDIPESLGAEVDYWQLKEENGWL--PDLDELRRLVRPNTkLICINNANNPTGALMDRAYLEEIVEIARSVDAYVL 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 293 EDAVYqdLWFDEPVSKPLKA--YDKnGIVlhIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKmqtDYgsSSISQqiaae 369
Cdd:PRK07324 191 SDEVY--RPLDEDGSTPSIAdlYEK-GIS--TNSMSKTYSlPGIRVGWIAANEEVIDILRKYR---DY--TMICA----- 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 370 wftnGLYDEHL-QFV---RNELKKR-RDFM---LHMLEKYCRE--IATWYEPTGGFYIWLHMNVPVSNRSLFDKALQEK- 438
Cdd:PRK07324 256 ----GVFDDMLaSLAlehRDAILERnRKIVrtnLAILDEWVAKepRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETg 331
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1266725804 439 ILLNPGTLYDRSanQFLRLSY--SYATLEEieiGIKKLAQLIK 479
Cdd:PRK07324 332 VLLVPGNRFDLE--GHVRIGYccDTETLKK---GLKKLSEFLR 369
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
9-84 |
6.14e-18 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 79.45 E-value: 6.14e-18
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1266725804 9 DMSLASPLYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNNNE 84
Cdd:COG1725 4 DFDSGVPIYEQIADQIKEAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRGKGTFVAEDAR 79
|
|
| PRK08361 |
PRK08361 |
aspartate aminotransferase; Provisional |
123-468 |
1.26e-17 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 236248 [Multi-domain] Cd Length: 391 Bit Score: 84.54 E-value: 1.26e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 123 VIRLGTGElaPSLLPEKKMKLIMNKLLQSNVPlGYEEPKGNLYLREKIAGYLKGH-GVYVSPDSILIVSGAIQALQLISM 201
Cdd:PRK08361 35 VISLGIGE--PDFDTPKNIKEAAKRALDEGWT-HYTPNAGIPELREAIAEYYKKFyGVDVDVDNVIVTAGAYEATYLAFE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 202 GLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPM-DENGLNASYIAKYKKQFNASILYTIPSFHNPTNFSMNAEKRKEV 280
Cdd:PRK08361 112 SLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLrEENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAI 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 281 MEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKNGIVLhIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGS 359
Cdd:PRK08361 192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTIL-ANSFSKTFAmTGWRLGFVIAPEQVIKDMIKLHAYIIGNV 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 360 SSISQQIAAEWFTNGLYDEHLQFVRNELKKRRDFMLhmleKYCREIA--TWYEPTGGFYIWLHMNVPVSNRSLFDKALQE 437
Cdd:PRK08361 271 ASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVL----KRLKEMPhiKVFEPKGAFYVFANIDETGMSSEDFAEWLLE 346
|
330 340 350
....*....|....*....|....*....|...
gi 1266725804 438 K--ILLNPGTLYDRSANQFLRLSYSYATLEEIE 468
Cdd:PRK08361 347 KarVVVIPGTAFGKAGEGYIRISYATSKEKLIE 379
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
157-479 |
6.13e-17 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 82.48 E-value: 6.13e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 157 YEEPKGNLYLREKIAGYLKGH-GVYVSPDSILIVS-GAIQALQLISMGLLPKGASILLEKPSYL-YSLNVFQSAGmrlIG 233
Cdd:PRK07682 53 YTANAGLLELRQEIAKYLKKRfAVSYDPNDEIIVTvGASQALDVAMRAIINPGDEVLIVEPSFVsYAPLVTLAGG---VP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 234 IPMDENG-----LNASYIAKYKKQFNASILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEP-VS 307
Cdd:PRK07682 130 VPVATTLenefkVQPAQIEAAITAKTKAILLCSPN--NPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAyTS 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 308 KPLKAYDKNGIVLhIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFTNGLYDehLQFVRNE 386
Cdd:PRK07682 208 FASIKGMRERTIL-ISGFSKGFAmTGWRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDD--VIRMRDS 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 387 LKKRRDFMLHMLekycREIA-TWYEPTGGFYIWLHMNVPVSNRSLFDKAL--QEKILLNPGTLYDRSANQFLRLSYSyAT 463
Cdd:PRK07682 285 YRKRRNFFVTSF----NEIGlTCHVPGGAFYAFPSISSTGLSSEEFAEQLllEEKVAVVPGSVFGESGEGFIRCSYA-TS 359
|
330
....*....|....*.
gi 1266725804 464 LEEIEIGIKKLAQLIK 479
Cdd:PRK07682 360 LEQLQEAMKRMKRFVE 375
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
123-364 |
7.14e-17 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 82.39 E-value: 7.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 123 VIRLGTGE--LAPSLLPEKKMKLIMNKLLQSNVPLGYEEPKGNLYLREKIAGYLKGHGVYV-SPDSILIVSGAIQALQLI 199
Cdd:TIGR01265 33 VIPLSHGDpsVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKlTADDVVLTSGCSQAIEIC 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 200 SMGLLPKGASILLEKPSY-LY-SLNVFQSAGMRLIGIpMDENG--LNASYIAKYKKQFNASILYTIPSfhNPTNFSMNAE 275
Cdd:TIGR01265 113 IEALANPGANILVPRPGFpLYdTRAAFSGLEVRLYDL-LPEKDweIDLDGLESLADEKTVAIVVINPS--NPCGSVFSRD 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 276 KRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKNGIVLHIGSMSK-VISPGLRIGWI-------VGPESVIQR 347
Cdd:TIGR01265 190 HLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKrWVVPGWRLGWIiihdphgIFRDTVLQG 269
|
250
....*....|....*..
gi 1266725804 348 LADIKMQTdYGSSSISQ 364
Cdd:TIGR01265 270 LKNLLQRI-LGPATIVQ 285
|
|
| PRK07681 |
PRK07681 |
LL-diaminopimelate aminotransferase; |
124-458 |
1.04e-16 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181081 Cd Length: 399 Bit Score: 81.78 E-value: 1.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 124 IRLGTGelAPSLLPEKKMKLIMNKLLQSNVPLGYEePKGNLYLREKIAGYLKG-HGVYVSPDS-ILIVSGAIQALQLISM 201
Cdd:PRK07681 35 IDLSIG--NPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNtHNVILNADKeVLLLMGSQDGLVHLPM 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 202 GLLPKGASILLEKPSY-LYSLNVfQSAGMRLIGIPM-DENGL--NASYIAKYKKQFNASILYTIPSfhNPTNFSMNAEKR 277
Cdd:PRK07681 112 VYANPGDIILVPDPGYtAYETGI-QMAGATSYYMPLkKENDFlpDLELIPEEIADKAKMMILNFPG--NPVPAMAHEDFF 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 278 KEVMEICNEIGLPIIEDAVYQDLWFDEpvSKPLKAYDKNG---IVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKM 353
Cdd:PRK07681 189 KEVIAFAKKHNIIVVHDFAYAEFYFDG--NKPISFLSVPGakeVGVEINSLSKSYSlAGSRIGYMIGNEEIVRALTQFKS 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 354 QTDYGSSSISQQIAAEWFTNGlyDEHLQFVRNELKKRRDFMLHMLEKYCREIAtwyEPTGGFYIWlhMNVPVSNRSL-FD 432
Cdd:PRK07681 267 NTDYGVFLPIQKAACAALRNG--AAFCEKNRGIYQERRDTLVDGFRTFGWNVD---KPAGSMFVW--AEIPKGWTSLsFA 339
|
330 340
....*....|....*....|....*...
gi 1266725804 433 KALQEK--ILLNPGTLYDRSANQFLRLS 458
Cdd:PRK07681 340 YALMDRanVVVTPGHAFGPHGEGFVRIA 367
|
|
| avtA |
PRK09440 |
valine--pyruvate transaminase; Provisional |
113-479 |
2.10e-16 |
|
valine--pyruvate transaminase; Provisional
Pssm-ID: 236517 Cd Length: 416 Bit Score: 81.05 E-value: 2.10e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 113 DINQAEFYPHVIRLGTGElaPSLLPEkkM----KLIMNKLLQS----NVPLGYEEPKGNLYLREKIAGYLKGH-GVYVSP 183
Cdd:PRK09440 22 DLNDGLRTPGAIMLGGGN--PAHIPE--MedyfRDLLADLLASgkltEALGNYDGPQGKDELIEALAALLNERyGWNISP 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 184 DSILIVSGAiQAL--QLISM--GLLPKGA--SILLE-KPSYL-YSlnvfqSAGM---RLIGIP----MDENGLnasyiAK 248
Cdd:PRK09440 98 QNIALTNGS-QSAffYLFNLfaGRRADGSlkKILFPlAPEYIgYA-----DAGLeedLFVSYRpnieLLPEGQ-----FK 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 249 YKKQFNA-SILYTIPS--FHNPTNFSMNAEKRKEVMEI---CNEIGLPIIEDAVY----QDLWFDEpvSKPLkaYDKNgi 318
Cdd:PRK09440 167 YHVDFEHlHIDEDTGAicVSRPTNPTGNVLTDEELEKLdalARQHNIPLLIDNAYgppfPGIIFSE--ATPL--WNPN-- 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 319 VLHIGSMSKVISPGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFTNGlydEHLQFVRNELK----KRRDFM 394
Cdd:PRK09440 241 IILCMSLSKLGLPGVRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESG---DLLRLSETVIRpfyrQKVQLA 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 395 LHMLEKYCREIaTWY--EPTGGFYIWLHM-NVPVSNRSLFDKALQEKILLNPGTLY----DRS---ANQFLRLSYSyATL 464
Cdd:PRK09440 318 IALLRRYLPDE-PCLihKPEGAIFLWLWFkDLPITTEELYQRLKARGVLVVPGHYFfpglDEDwphAHQCIRMNYV-QDD 395
|
410
....*....|....*
gi 1266725804 465 EEIEIGIKKLAQLIK 479
Cdd:PRK09440 396 EEIEKGIAILAEEVE 410
|
|
| PRK06348 |
PRK06348 |
pyridoxal phosphate-dependent aminotransferase; |
157-458 |
1.32e-15 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180537 Cd Length: 384 Bit Score: 78.22 E-value: 1.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 157 YEEPKGNLYLREKIAG-YLKGHGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIP 235
Cdd:PRK06348 62 YTDSGGDVELIEEIIKyYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 236 -MDENGLNASyIAKYKKQFN----ASILYTiPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSkPL 310
Cdd:PRK06348 142 tYEEDGFQIN-VKKLEALITsktkAIILNS-PN--NPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFV-PM 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 311 KAYDK---NGIVlhIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFTNglYDEHLQFVRNE 386
Cdd:PRK06348 217 ATLAGmpeRTIT--FGSFSKDFAmTGWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKH--RDTIVPLIKEE 292
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1266725804 387 LKKRRDFMLHMLEKYCReiATWYEPTGGFYIWLHM-NVPVSNRSLFDKALQE-KILLNPGTLYDRSANQFLRLS 458
Cdd:PRK06348 293 FQKRLEYAYKRIESIPN--LSLHPPKGSIYAFINIkKTGLSSVEFCEKLLKEaHVLVIPGKAFGESGEGYIRLA 364
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
165-479 |
3.62e-15 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 76.91 E-value: 3.62e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 165 YLREKIAGYL-KGHGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPMDENG--- 240
Cdd:PRK06108 65 ELREALARYVsRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGggw 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 241 ------LNASYIAKYKkqfnaSILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKP----L 310
Cdd:PRK06108 145 tldldrLLAAITPRTR-----ALFINSPN--NPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPsfldI 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 311 KAYDKNGIVLHigSMSKVIS-PGLRIGWIVGPESVIQRLADIkmqTDYGSSSISQ--QIAAEwftnGLYDEHLQFVRNE- 386
Cdd:PRK06108 218 AEPDDRIIFVN--SFSKNWAmTGWRLGWLVAPPALGQVLEKL---IEYNTSCVAQfvQRAAV----AALDEGEDFVAELv 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 387 --LKKRRDFMLHMLEKYCREIATwyEPTGGFYIWLhmNVPVSNRSL-FDKALQEK--ILLNPGTLYDRSANQFLRLSYSY 461
Cdd:PRK06108 289 arLRRSRDHLVDALRALPGVEVA--KPDGAMYAFF--RIPGVTDSLaLAKRLVDEagLGLAPGTAFGPGGEGFLRWCFAR 364
|
330
....*....|....*...
gi 1266725804 462 ATlEEIEIGIKKLAQLIK 479
Cdd:PRK06108 365 DP-ARLDEAVERLRRFLA 381
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
16-79 |
5.12e-15 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 69.57 E-value: 5.12e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1266725804 16 LYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIV 79
Cdd:pfam00392 1 LYEQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTFV 64
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
20-79 |
9.88e-15 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 68.37 E-value: 9.88e-15
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 20 IETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIV 79
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTFV 60
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
123-339 |
6.32e-14 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 73.28 E-value: 6.32e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 123 VIRLGTGE--LAPSLLPEKKMKLIMNKLLQSNVPLGYEEPKGNLYLREKIAGYLKGHGVYVSPDSILIVSGAIQALQLIS 200
Cdd:TIGR01264 33 MIKLSIGDptVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 201 MGLLPKGASILLEKPSY-LYSlNVFQSAG--MRLIGIPMDEN-GLNASYIAKYKKQFNASILYTIPSfhNPTNFSMNAEK 276
Cdd:TIGR01264 113 AALANAGQNILVPRPGFpLYE-TLAESMGieVKLYNLLPDKSwEIDLKQLESLIDEKTAALIVNNPS--NPCGSVFSRQH 189
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1266725804 277 RKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKNGIVLHIGSMSK-VISPGLRIGWIV 339
Cdd:TIGR01264 190 LEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKrWLVPGWRLGWII 253
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
13-84 |
7.60e-14 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 70.73 E-value: 7.60e-14
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1266725804 13 ASPLYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNNNE 84
Cdd:COG2186 5 RRSLAEQVAEQLRELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQGGGTFVREPSP 76
|
|
| PRK09148 |
PRK09148 |
LL-diaminopimelate aminotransferase; |
156-479 |
2.39e-13 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181674 [Multi-domain] Cd Length: 405 Bit Score: 71.63 E-value: 2.39e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 156 GYEEPKGNLYLREKIAGYL-KGHGVYVSPDSILIVS-GAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIG 233
Cdd:PRK09148 63 RYSASKGIPGLRRAQAAYYaRRFGVKLNPDTQVVATlGSKEGFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRS 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 234 IPM--DENglnasyiakYKKQFNASILYTIP-------SF-HNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFD 303
Cdd:PRK09148 143 VPAepDEE---------FFPALERAVRHSIPkpialivNYpSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFD 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 304 -EPVSKPLKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGS-SSIsqQIAAEWFTNGLYDEhL 380
Cdd:PRK09148 214 gNPPPSVLQVPGAKDVTVEFTSMSKTFSmAGWRMGFAVGNERLIAALTRVKSYLDYGAfTPI--QVAATAALNGPQDC-I 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 381 QFVRNELKKRRDFMLHMLEKYCREIATwyePTGGFYIWlhMNVPVSNRSL----FDKALQEK--ILLNPGTLYDRSANQF 454
Cdd:PRK09148 291 AEMRELYKKRRDVLVESFGRAGWDIPP---PAASMFAW--APIPEAFRHLgsleFSKLLVEKadVAVAPGVGFGEHGDGY 365
|
330 340
....*....|....*....|....*
gi 1266725804 455 LRLSysyatLEEIEIGIKKLAQLIK 479
Cdd:PRK09148 366 VRIA-----LVENEQRIRQAARNIK 385
|
|
| PRK05957 |
PRK05957 |
pyridoxal phosphate-dependent aminotransferase; |
106-479 |
1.09e-12 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235654 Cd Length: 389 Bit Score: 69.33 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 106 PNLPAIQDINQAEfyPHVIRLGTGELapSLLPEKKMKLIMNKLLQSNVPLGYEEPKGNLYLREKIAGYLKG-HGVYVSPD 184
Cdd:PRK05957 14 PIIPVVGQLIREN--PGTISLGQGVV--SYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQdNGIELNNE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 185 SILIVS-GAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPMDEN-GLNASYIAKYKKQFNASILyTIp 262
Cdd:PRK05957 90 QAIVVTaGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNyQLQPEAIEQAITPKTRAIV-TI- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 263 SFHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDE-PVSKPLKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVG 340
Cdd:PRK05957 168 SPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGvKHFSPGSIPGSGNHTISLYSLSKAYGfASWRIGYMVI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 341 PESVIQRLADIKMQTDYGSSSISQQ--IAAEWFTNGLYDEHLQfvrnELKKRRDFMLHML---EKYCreiaTWYEPTGGF 415
Cdd:PRK05957 248 PIHLLEAIKKIQDTILICPPVVSQYaaLGALQVGKSYCQQHLP----EIAQVRQILLKSLgqlQDRC----TLHPANGAF 319
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1266725804 416 YIWLHMNVPVSNRSLFDKALQE-KILLNPGTLYDRSANQFLRLSYSYATLEEIEIGIKKLAQLIK 479
Cdd:PRK05957 320 YCFLKVNTDLNDFELVKQLIREyRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLK 384
|
|
| PRK05942 |
PRK05942 |
aspartate aminotransferase; Provisional |
156-458 |
1.09e-12 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 180317 Cd Length: 394 Bit Score: 69.36 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 156 GYEEPKGNLYLREKIAG-YLKGHGVYVSPDS-ILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIG 233
Cdd:PRK05942 68 GYPPFEGTASFRQAITDwYHRRYGVELDPDSeALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 234 IPMD-ENG--LNASYIAKYKKQfNASILY-TIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFD--EPVS 307
Cdd:PRK05942 148 IILKpENDwlIDLSSIPEEVAQ-QAKILYfNYPS--NPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDgyQPTS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 308 KpLKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQiAAEWFTNgLYDEHLQFVRNE 386
Cdd:PRK05942 225 L-LEIPGAKDIGVEFHTLSKTYNmAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQK-AAETALQ-LPDSYLQQVQER 301
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1266725804 387 LKKRRDFMLHMLEKYCREIatwyEPT-GGFYIWLHMNVPVSNRSLFDKALQEK-ILLNPGTLYDRSANQFLRLS 458
Cdd:PRK05942 302 YRTRRDFLIQGLGELGWNI----PPTkATMYLWVPCPVGMGSTDFALNVLQKTgVVVTPGNAFGEGGEGYVRIS 371
|
|
| PLN00145 |
PLN00145 |
tyrosine/nicotianamine aminotransferase; Provisional |
149-357 |
2.37e-12 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 215074 [Multi-domain] Cd Length: 430 Bit Score: 68.64 E-value: 2.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 149 LQSNVPLGYEEPKGNLYLREKIAGYLKGHGVY-VSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLY--SLNVFQ 225
Cdd:PLN00145 82 LRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYeLSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLyeARAVFS 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 226 SAGMRLIG-IPMDENGLNASYIAKYKKQFNASILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDE 304
Cdd:PLN00145 162 GLEVRHFDlLPERGWEVDLEGVEALADENTVAMVIINPN--NPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS 239
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1266725804 305 PVSKPLKAYDKNGIVLHIGSMSKV-ISPGLRIGWIV--GPESVIQRLADIKMQTDY 357
Cdd:PLN00145 240 KPFVPMGVFGEVAPVLTLGSISKRwVVPGWRLGWIAtcDPNGILKETKVVDSIRNY 295
|
|
| PRK07777 |
PRK07777 |
putative succinyldiaminopimelate transaminase DapC; |
166-394 |
3.19e-12 |
|
putative succinyldiaminopimelate transaminase DapC;
Pssm-ID: 236095 [Multi-domain] Cd Length: 387 Bit Score: 68.14 E-value: 3.19e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 166 LREKIAGY-LKGHGVYVSPDS-ILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPM------- 236
Cdd:PRK07777 66 LRAAIAAQrRRRYGLEYDPDTeVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLvpdgrgf 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 237 --DENGLNASYIAKYKkqfnasiLYTIPSFHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYD 314
Cdd:PRK07777 146 alDLDALRAAVTPRTR-------ALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLP 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 315 knGI---VLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFTNGlyDEHLQFVRNELKKR 390
Cdd:PRK07777 219 --GMrerTVTISSAAKTFNvTGWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHE--DAWVAALRDSLQAK 294
|
....
gi 1266725804 391 RDFM 394
Cdd:PRK07777 295 RDRL 298
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
154-469 |
4.88e-12 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 67.47 E-value: 4.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 154 PLGYEEpkgnlyLREKIAGYLKghgvyVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIG 233
Cdd:PRK06225 65 PEGFPE------LRELILKDLG-----LDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIE 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 234 IPM--DENGLNASYIA-KYKKQFNASILYTI-PSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSkp 309
Cdd:PRK06225 134 VPIysEECNYKLTPELvKENMDENTRLIYLIdPL--NPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLA-- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 310 LKAYDKNGIVLHigSMSKVIS-PGLRIGWIVGPESVIQRLADIKMqTDYGSSSISQQIAaewfTNGLY--DEHLQFVRNE 386
Cdd:PRK06225 210 AEYAPEHTVTSY--SFSKIFGmAGLRIGAVVATPDLIEVVKSIVI-NDLGTNVIAQEAA----IAGLKvkDEWIDRIRRT 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 387 LKKRRdfmlHMLEKYCREIATWYEPT----GGFYIWLHMNVPVSNRSLFDKALQEKILLNPGTLY-DRSANQFLRLSYSY 461
Cdd:PRK06225 283 TFKNQ----KLIKEAVDEIEGVFLPVypshGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTsKRFGDRYIRVSFSI 358
|
....*...
gi 1266725804 462 ATlEEIEI 469
Cdd:PRK06225 359 PR-EQVEV 365
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
149-339 |
2.07e-11 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 65.72 E-value: 2.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 149 LQSNVPLGYEEPKGNLYLREKIAGYLKGHGVY-VSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSY-LYSLNV-FQ 225
Cdd:PLN02656 61 LQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYkLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFpIYELCAaFR 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 226 SAGMRLIGIpMDENGLNASYIAKYKKQFNASILYTIPSFHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEP 305
Cdd:PLN02656 141 HLEVRYVDL-LPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN 219
|
170 180 190
....*....|....*....|....*....|....*
gi 1266725804 306 VSKPLKAYDKNGIVLHIGSMSKV-ISPGLRIGWIV 339
Cdd:PLN02656 220 PFVPMGVFGSIVPVLTLGSLSKRwIVPGWRLGWFV 254
|
|
| PRK08175 |
PRK08175 |
aminotransferase; Validated |
156-458 |
7.13e-11 |
|
aminotransferase; Validated
Pssm-ID: 181268 [Multi-domain] Cd Length: 395 Bit Score: 63.96 E-value: 7.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 156 GYEEPKGNLYLREKIAG-YLKGHGVYVSPDSILIVS-GAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIG 233
Cdd:PRK08175 62 GYSTSRGIPRLRRAISRwYQDRYDVDIDPESEAIVTiGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRS 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 234 IPMDENGlnaSYIAKYKKQFNASI------LYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVS 307
Cdd:PRK08175 142 VPLVEGV---DFFNELERAIRESYpkpkmmILGFPS--NPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 308 KP-LKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSiSQQIAAEWFTNGlYDEHLQFVRN 385
Cdd:PRK08175 217 PSiMQVPGAKDVAVEFFTLSKSYNmAGWRIGFMVGNPELVSALARIKSYHDYGTFT-PLQVAAIAALEG-DQQCVRDIAE 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 386 ELKKRRDFMLHMLEKycreiATWY--EPTGGFYIWlhMNVPVSNRSL----FDKAL--QEKILLNPGTLYDRSANQFLRL 457
Cdd:PRK08175 295 QYKRRRDVLVKGLHE-----AGWMveMPKASMYVW--AKIPEPYAAMgsleFAKKLlnEAKVCVSPGIGFGDYGDTHVRF 367
|
.
gi 1266725804 458 S 458
Cdd:PRK08175 368 A 368
|
|
| PRK05839 |
PRK05839 |
succinyldiaminopimelate transaminase; |
238-479 |
1.89e-10 |
|
succinyldiaminopimelate transaminase;
Pssm-ID: 180281 Cd Length: 374 Bit Score: 62.40 E-value: 1.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 238 ENGLNASYIAKYKKQFNASILytiPSFHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKNG 317
Cdd:PRK05839 141 ENDFTPSLNEKELQEVDLVIL---NSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVG 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 318 -----IVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAA-EWftngLYDEHLQFVRNELKKr 390
Cdd:PRK05839 218 nesfkNVLVINSISKRSSaPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAvAW----LDDEHAEFFRNIYAK- 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 391 rDFmlhmleKYCREIATWYEPTGGFYIWLhmnvPVSNRSLFDKALQEK--ILLNPGTLYDRS--ANQFLRLS--YSYATL 464
Cdd:PRK05839 293 -NL------KLAREILGITIPPATFYVWL----PVDNDEEFTKKLYQNegIKVLPGSFLGRNgiGKGYVRIAlvYDTPKL 361
|
250
....*....|....*
gi 1266725804 465 EEIeigIKKLAQLIK 479
Cdd:PRK05839 362 EKA---LEIIKTYLE 373
|
|
| MalY |
COG1168 |
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor ... |
155-476 |
3.51e-10 |
|
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism, General function prediction only];
Pssm-ID: 440782 Cd Length: 387 Bit Score: 61.65 E-value: 3.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 155 LGYEEPKGNLYlrEKIAGYLKG-HGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIG 233
Cdd:COG1168 60 FGYTAPPDEYY--EAIIDWLKRrHGWEIDPEWIVFTPGVVPGLALAIRAFTEPGDGVLIQTPVYPPFFKAIENNGRELVE 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 234 IPMDENglNASY---IAKYKKQFNASI-LYTIPSFHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDE----P 305
Cdd:COG1168 138 NPLILE--DGRYridFDDLEAKLDPGVkLLLLCNPHNPTGRVWTREELERLAELCERHDVLVISDEIHADLVLPGhkhtP 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 306 VSKPLKAYDKNGIVLHigSMSKV--IsPGLRIGWIVGPESVI-QRLADIKMQTDYGSSSISQQIAAEW-FTNGlyDEHLQ 381
Cdd:COG1168 216 FASLSEEAADRTITLT--SPSKTfnL-AGLKASYAIIPNPALrARFARALEGLGLPSPNVLGLVATEAaYREG--EEWLD 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 382 FVRNELKKRRDFMLHMLEKYCREIaTWYEPTGGFYIWLHM-NVPVSNRSLFDKALQE-KILLNPGTLYDRSANQFLRLSY 459
Cdd:COG1168 291 ELLAYLRGNRDLLAEFLAEHLPGV-KVTPPEATYLAWLDCrALGLDDEELAEFLLEKaGVALSDGATFGEGGEGFVRLNF 369
|
330
....*....|....*....
gi 1266725804 460 --SYATLEEieiGIKKLAQ 476
Cdd:COG1168 370 acPRAVLEE---ALERLAK 385
|
|
| PRK06107 |
PRK06107 |
aspartate transaminase; |
166-420 |
4.01e-10 |
|
aspartate transaminase;
Pssm-ID: 180403 Cd Length: 402 Bit Score: 61.67 E-value: 4.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 166 LREKIAGYLKGH-GVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYL-YSLNVFQSAGMRLI-------GIPM 236
Cdd:PRK06107 75 LRKAIIAKLERRnGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVsYPDMVLANDGTPVIvacpeeqGFKL 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 237 DENGLNASYIAKYKkqfnaSILYTIPSfhNPTNFSMNAEKRK---EVMEICNEIGlpIIEDAVYQDLWF-DEPVSKPLKA 312
Cdd:PRK06107 155 TPEALEAAITPRTR-----WLILNAPS--NPTGAVYSRAELRalaDVLLRHPHVL--VLTDDIYDHIRFdDEPTPHLLAA 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 313 Y----DKngiVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFTNglyDEhlQFVRNEL 387
Cdd:PRK06107 226 ApelrDR---VLVTNGVSKTYAmTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNG---DQ--SFVTESV 297
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1266725804 388 ---KKRRDFMLHMLEK----YCReiatwyEPTGGFYIWLH 420
Cdd:PRK06107 298 avyKQRRDYALALLNAipglSCL------VPDGAFYLYVN 331
|
|
| PRK08636 |
PRK08636 |
LL-diaminopimelate aminotransferase; |
144-479 |
5.51e-10 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 236316 Cd Length: 403 Bit Score: 61.26 E-value: 5.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 144 IMNKLLQS-NVPL--GYEEPKGNLYLREKIAG-YLKGHGVYVSPDSILIVS-----GAIQALQLISmgllPKGASILLEK 214
Cdd:PRK08636 51 IIDKLCESaQKPKthGYSVSKGIYKLRLAICNwYKRKYNVDLDPETEVVATmgskeGYVHLVQAIT----NPGDVAIVPD 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 215 PSYLYSLNVFQSAGMRLIGIPM--------DENGlnasYIAKYKKQFNASI---LYTIPSF-HNPTNFSMNAEKRKEVME 282
Cdd:PRK08636 127 PAYPIHSQAFILAGGNVHKMPLeynedfelDEDQ----FFENLEKALRESSpkpKYVVVNFpHNPTTATVEKSFYERLVA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 283 ICNEIGLPIIEDAVYQDLWFDEPVSKP-LKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGS- 359
Cdd:PRK08636 203 LAKKERFYIISDIAYADITFDGYKTPSiLEVEGAKDVAVESYTLSKSYNmAGWRVGFVVGNKKLVGALKKIKSWLDYGMf 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 360 SSIsqQIAAEWFTNGlYDEHLQFVRNELKKRRDFMLHMLEKYCREIATwyePTGGFYIWLHMNVPVSNR-SL-FDKAL-- 435
Cdd:PRK08636 283 TPI--QVAATIALDG-DQSCVEEIRETYRKRRDVLIESFANAGWELQK---PRASMFVWAKIPEPARHLgSLeFSKQLlt 356
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 1266725804 436 QEKILLNPGTLYDRSANQFLRLSysyatLEEIEIGIKKLAQLIK 479
Cdd:PRK08636 357 EAKVAVSPGIGFGEYGDEYVRIA-----LIENENRIRQAARNIK 395
|
|
| PRK06207 |
PRK06207 |
pyridoxal phosphate-dependent aminotransferase; |
157-479 |
3.05e-09 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235742 Cd Length: 405 Bit Score: 58.62 E-value: 3.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 157 YEEPKGNLYLREKIAGYLKGH-GVYVSPDSILIVSGAIQ-ALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGI 234
Cdd:PRK06207 74 YTEYRGDADIRELLAARLAAFtGAPVDAADELIITPGTQgALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 235 PMD------ENGLNASYIAKYKKQFNASILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSK 308
Cdd:PRK06207 154 QLDylsadkRAGLDLDQLEEAFKAGVRVFLFSNPN--NPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYT 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 309 PLKAY--DKNGIVLHIGSmSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGSSSISQQIAAEWFtnglyDEHLQFVRN 385
Cdd:PRK06207 232 HLRALpiDPENVITIMGP-SKTESlSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWF-----SEPDGWMKD 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 386 ELKKR---RDFMLHMLeKYCREIATwYEPTGGFYIWLHMNVPVSNRSLFDKAL--QEKILLNPGTLYDRSANQFLRLSYS 460
Cdd:PRK06207 306 RIARHqaiRDDLLRVL-RGVEGVFV-RAPQAGSYLFPRLPRLAVSLHDFVKILrlQAGVIVTPGTEFSPHTADSIRLNFS 383
|
330
....*....|....*....
gi 1266725804 461 YATLEEIEiGIKKLAQLIK 479
Cdd:PRK06207 384 QDHAAAVA-AAERIAQLIE 401
|
|
| PRK06290 |
PRK06290 |
LL-diaminopimelate aminotransferase; |
120-479 |
4.72e-09 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 235772 Cd Length: 410 Bit Score: 58.13 E-value: 4.72e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 120 YPHV--IRLGTGElaPSLLPEKKMKLIMNKLLQSNVPLGYEEpKGNLYLREKIAGYLKG-HGV-YVSPDSILIVS-GAIQ 194
Cdd:PRK06290 41 HPDMelIDMGVGE--PDEMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKvFGVkDIDPVTEVIHSiGSKP 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 195 ALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPM-DENG----LNAsyIAKYKKQfNASILY-TIPSfhNPT 268
Cdd:PRK06290 118 ALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLlEENNflpdLDS--IPKDIKE-KAKLLYlNYPN--NPT 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 269 NFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEpvsKPLK------AYDKnGIVLHigSMSKVIS-PGLRIGWIVGP 341
Cdd:PRK06290 193 GAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG---KPLSflsvpgAKEV-GVEIH--SLSKAYNmTGWRLAFVVGN 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 342 ESVIQRLADIKMQTDYGSSSISQQIAAEWFTNglyDEHLQFVRNELKKRRDFMLHMLEKyCREIATwyEPTGGFYIWLHM 421
Cdd:PRK06290 267 ELIVKAFATVKDNNDSGQFIAIQKAGIYALDH---PEITEKIREKYSRRLDKLVKILNE-VGFKAE--MPGGTFYLYVKA 340
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1266725804 422 NVPVSNRSLFDKA-------LQEKILlnpGTLYDRSANQFLRLSYSY-ATLEEIEigiKKLAQLIK 479
Cdd:PRK06290 341 PKGTKSGIKFENAeefsqylIKEKLI---STVPWDDAGHFLRFSVTFeAKDEEEE---DRILEEIK 400
|
|
| PLN00143 |
PLN00143 |
tyrosine/nicotianamine aminotransferase; Provisional |
157-466 |
9.36e-09 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 165711 [Multi-domain] Cd Length: 409 Bit Score: 57.33 E-value: 9.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 157 YEEPKGNLYLREKIAGYLKGHGVY-VSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSY--LYSLNVFQSAGMRLIG 233
Cdd:PLN00143 70 YAPTGGILPARRAIADYLSNDLPYqLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFpdVETYAIFHHLEIRHFD 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 234 IpMDENGLNASYIAKYKKQFNASILYTIPSFHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAY 313
Cdd:PLN00143 150 L-LPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLF 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 314 DKNGIVLHIGSMSKV-ISPGLRIGWIV--GPESVIQR--LAD-IKMQTDYGSSS----------ISQQIAAEWFTNGLyd 377
Cdd:PLN00143 229 ASIVPVITLGSISKRwMIPGWGLGWLVtcDPSGLLQIceIADsIKKALNPAPFPptfiqaaipeILEKTTEDFFSKTI-- 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 378 ehlqfvrNELKKRRDFMLHMLEKY-CreIATWYEPTGGFYIWLHMNVPVSNRSLFDK------ALQEKILLNPGTLYdrS 450
Cdd:PLN00143 307 -------NILRAALAFCYDKLKEIpC--IMCPQKAEGAFFALVKLNLLLLEDIEDDMefclklAKEESLIILPGVTV--G 375
|
330
....*....|....*...
gi 1266725804 451 ANQFLRLSYS--YATLEE 466
Cdd:PLN00143 376 LKNWLRITFAveQSSLED 393
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
156-477 |
3.86e-08 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 55.35 E-value: 3.86e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 156 GYEEPKGNLYLREKIAGYLKGH-GVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGI 234
Cdd:PRK07550 62 LYGPVEGLPELREAYAAHYSRLyGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 235 PMDE-NGL--NASYIAKYKKQFNASILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDlwFDEPVSKP-- 309
Cdd:PRK07550 142 PCDEgPGLlpDPAAAEALITPRTRAIALVTPN--NPTGVVYPPELLHELYDLARRHGIALILDETYRD--FDSGGGAPhd 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 310 -LKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIkMQTDYGSSSISQQIAAEWftnGLydEHL-QFV--- 383
Cdd:PRK07550 218 lFADPDWDDTLVHLYSFSKSYAlTGHRVGAVVASPARIAEIEKF-MDTVAICAPRIGQIAVAW---GL--PNLaDWRagn 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 384 RNELKKRRDFMLHMLEKycreIATW-YEPTGGFYIWL-HMNVPVSNRSLFDKALQEK-ILLNPGTLYDRSANQFLRLSYS 460
Cdd:PRK07550 292 RAEIARRRDAFRAVFAR----LPGWeLLASGAYFAYVrHPFPDRPSREVARRLAKEAgILCLPGTMFGPGQEGYLRLAFA 367
|
330
....*....|....*..
gi 1266725804 461 YATLEEIEIGIKKLAQL 477
Cdd:PRK07550 368 NADVAGIGELVERLRAF 384
|
|
| trehalos_R_Bsub |
TIGR02404 |
trehalose operon repressor, B. subtilis-type; This family consists of repressors of the GntR ... |
17-83 |
5.72e-08 |
|
trehalose operon repressor, B. subtilis-type; This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli. [Regulatory functions, DNA interactions]
Pssm-ID: 274116 [Multi-domain] Cd Length: 233 Bit Score: 53.52 E-value: 5.72e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1266725804 17 YKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNNN 83
Cdd:TIGR02404 2 YEQIYQDLEQKITKGQYKEGDYLPSEHELMDQYGASRETVRKALNLLTERGYIQKIQGKGSIVLNRK 68
|
|
| PRK11523 |
PRK11523 |
transcriptional regulator ExuR; |
10-119 |
9.18e-08 |
|
transcriptional regulator ExuR;
Pssm-ID: 183176 [Multi-domain] Cd Length: 253 Bit Score: 53.31 E-value: 9.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 10 MSLASP--LYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNNNENts 87
Cdd:PRK11523 1 MEITEPrrLYQQLAAELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPR-- 78
|
90 100 110
....*....|....*....|....*....|....
gi 1266725804 88 tYAPPPNWQSYVETGLHYPNLPAIQDI--NQAEF 119
Cdd:PRK11523 79 -HQQAADNNMEFANYGPFELLQARQLIesNIAEF 111
|
|
| PRK08068 |
PRK08068 |
transaminase; Reviewed |
161-424 |
1.55e-07 |
|
transaminase; Reviewed
Pssm-ID: 181219 Cd Length: 389 Bit Score: 53.39 E-value: 1.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 161 KGNLYLREKIAG-YLKGHGVYVSPDS-ILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIPM-D 237
Cdd:PRK08068 70 RGYPFLKEAAADfYKREYGVTLDPETeVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLiA 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 238 ENGLNASYIA---KYKKQfnASILY-TIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFD--EPVSKpLK 311
Cdd:PRK08068 150 ENNFLPDYTKipeEVAEK--AKLMYlNYPN--NPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDgqKPVSF-LQ 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 312 AYDKNGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKmqtDYGSSSI---SQQIAAEWFTNGlyDEHLQFVRNEL 387
Cdd:PRK08068 225 TPGAKDVGIELYTLSKTFNmAGWRVAFAVGNESVIEAINLLQ---DHLFVSLfgaIQDAAIEALLSD--QSCVAELVARY 299
|
250 260 270
....*....|....*....|....*....|....*....
gi 1266725804 388 KKRRDFMLHMlekyCREIAtW--YEPTGGFYIWlhMNVP 424
Cdd:PRK08068 300 ESRRNAFISA----CREIG-WevDAPKGSFFAW--MPVP 331
|
|
| PRK07366 |
PRK07366 |
LL-diaminopimelate aminotransferase; |
156-478 |
1.65e-07 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 180947 Cd Length: 388 Bit Score: 53.14 E-value: 1.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 156 GYEEPKGNLYLREKIAG-YLKGHGVYVSPDS-ILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIG 233
Cdd:PRK07366 63 GYLLFHGTLDFREAAAQwYEQRFGLAVDPETeVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYP 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 234 IPM-DENGlnasyiakYKKQFN---ASIL----YTIPSF-HNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDE 304
Cdd:PRK07366 143 MPLrAEND--------FLPVFAdipTEVLaqarLMVLSYpHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 305 PVSKP--LKAYDKNGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLADIKMQTDYGS-SSISQQIAAEWFTNglyDEHL 380
Cdd:PRK07366 215 EVEPPsiLQADPEKSVSIEFFTLSKSYNmGGFRIGFAIGNAQLIQALRQVKAVVDFNQyRGILNGAIAALTGP---QATV 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 381 QFVRNELKKRRDFMLHMLEKYCREIATwyePTGGFYIWLHMNVPVSNRSL-FDKAL--QEKILLNPGTLYDRSANQFLRl 457
Cdd:PRK07366 292 QQTVQIFRQRRDAFINALHQIGWPVPL---PEATMYVWAKLPEPWQGNSVeFCTQLvaQTGVAASPGSGFGKSGEGYVR- 367
|
330 340
....*....|....*....|....
gi 1266725804 458 sysYATLEE---IEIGIKKLAQLI 478
Cdd:PRK07366 368 ---FALVHDpdiLEEAVERIAAFL 388
|
|
| C_P_lyase_phnF |
TIGR02325 |
phosphonates metabolism transcriptional regulator PhnF; All members of the seed alignment for ... |
16-82 |
1.98e-07 |
|
phosphonates metabolism transcriptional regulator PhnF; All members of the seed alignment for this family are predicted helix-turn-helix transcriptional regulatory proteins of the broader gntR and are found associated with genes for the import and degradation of phosphonates and/or related compounds (e.g. phosphonites) with a direct C-P bond. [Transport and binding proteins, Anions, Regulatory functions, DNA interactions]
Pssm-ID: 131378 [Multi-domain] Cd Length: 238 Bit Score: 52.09 E-value: 1.98e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1266725804 16 LYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNN 82
Cdd:TIGR02325 9 LWRQIADKIEQEIAAGHLRAGDYLPAEMQLAERFGVNRHTVRRAIAALVERGLLRAEQGRGTFVAAR 75
|
|
| PRK09764 |
PRK09764 |
GntR family transcriptional regulator; |
13-89 |
2.46e-07 |
|
GntR family transcriptional regulator;
Pssm-ID: 182065 [Multi-domain] Cd Length: 240 Bit Score: 51.75 E-value: 2.46e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1266725804 13 ASPLYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNNNENTSTY 89
Cdd:PRK09764 3 HKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVNYDIF 79
|
|
| PTZ00433 |
PTZ00433 |
tyrosine aminotransferase; Provisional |
124-339 |
4.32e-07 |
|
tyrosine aminotransferase; Provisional
Pssm-ID: 185613 Cd Length: 412 Bit Score: 52.10 E-value: 4.32e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 124 IRLGTGE-------LAPSLLPEKKMKLImnkllQSNVPLGYEEPKGNLYLREKIAGY----------LKGHgvyVSPDSI 186
Cdd:PTZ00433 36 IKLSVGDptldgnlLTPAIQTKALVEAV-----DSQECNGYPPTVGSPEAREAVATYwrnsfvhkesLKST---IKKDNV 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 187 LIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAG--MRLIGIPMDEN-GLNASYIAKYKKQFNASILYTIPS 263
Cdd:PTZ00433 108 VLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGieMRFYNCRPEKDwEADLDEIRRLVDDRTKALIMTNPS 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 264 fhNP--TNFSmnaekRK---EVMEICNEIGLPIIEDAVYQDLWFDEPVSKPLKAYDKNGIVLHIGSMSKV-ISPGLRIGW 337
Cdd:PTZ00433 188 --NPcgSNFS-----RKhveDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNlVVPGWRLGW 260
|
..
gi 1266725804 338 IV 339
Cdd:PTZ00433 261 LL 262
|
|
| GntR |
COG1802 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
7-80 |
5.01e-07 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441407 [Multi-domain] Cd Length: 222 Bit Score: 50.69 E-value: 5.01e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1266725804 7 KPDMSLASPLYKQIETYIKERIVNGEWTVGTKLpSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVV 80
Cdd:COG1802 3 SPSPLRRESLAEQVYEALREAILSGELPPGERL-SEAELAERLGVSRTPVREALRRLEAEGLVEIRPNRGARVA 75
|
|
| PLN00175 |
PLN00175 |
aminotransferase family protein; Provisional |
156-341 |
5.88e-07 |
|
aminotransferase family protein; Provisional
Pssm-ID: 215089 [Multi-domain] Cd Length: 413 Bit Score: 51.79 E-value: 5.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 156 GYEEPKGNLYLREKiagYLKGHGVYVSPDS-ILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGMRLIGI 234
Cdd:PLN00175 90 GFGVPELNSAIAER---FKKDTGLVVDPEKeVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTV 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 235 ---------PMDEngLNASYIAKYKkqfnaSILYTIPsfHNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFD-E 304
Cdd:PLN00175 167 tlrppdfavPEDE--LKAAFTSKTR-----AILINTP--HNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEgD 237
|
170 180 190
....*....|....*....|....*....|....*....
gi 1266725804 305 PVS-KPLKAYDKNGIVLHigSMSKVIS-PGLRIGWIVGP 341
Cdd:PLN00175 238 HISmASLPGMYERTVTMN--SLGKTFSlTGWKIGWAIAP 274
|
|
| PRK06855 |
PRK06855 |
pyridoxal phosphate-dependent aminotransferase; |
141-338 |
7.21e-07 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180734 Cd Length: 433 Bit Score: 51.49 E-value: 7.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 141 MKLIMNKLLQSNVPLGYEEPKGNLYLREKIAGYL-KGHGVYVSPDSILIVSGAIQALQLIsMGLLPKGASILLEKPSY-L 218
Cdd:PRK06855 53 MKEIVAELVMDDKSYGYCPTKGVLETREFLAELNnKRGGAQITPDDIIFFNGLGDAIAKI-YGLLRREARVIGPSPAYsT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 219 YSLNVFQSAGMRLIGIPMD-ENGLNASYIAKYKK-QFN---ASILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIE 293
Cdd:PRK06855 132 HSSAEAAHAGYPPVTYRLDpENNWYPDLDDLENKvKYNpsiAGILLINPD--NPTGAVYPKEILREIVDIAREYDLFIIC 209
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1266725804 294 DAVYQDLWFDEPVSKPLKAY--DKNGIVLhigsmsKVIS-----PGLRIGWI 338
Cdd:PRK06855 210 DEIYNNIVYNGKKTVPLSEVigDVPGIAL------KGISkelpwPGSRCGWI 255
|
|
| PLN02607 |
PLN02607 |
1-aminocyclopropane-1-carboxylate synthase |
167-479 |
8.08e-07 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 215327 [Multi-domain] Cd Length: 447 Bit Score: 51.43 E-value: 8.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 167 REKIAGYL---KGHGVYVSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYL-YSLNVFQSAGMRLIGIPMD-ENG- 240
Cdd:PLN02607 101 RQAMASFMeqiRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPgFDRDLRWRTGVKIVPIHCDsSNNf 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 241 ------LNASYIAKYKKQFNA-SILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFDEP----VSKP 309
Cdd:PLN02607 181 qvtpqaLEAAYQEAEAANIRVrGVLITNPS--NPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASefvsVAEI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 310 LKAYDKNGIV--LHI-GSMSKVIS-PGLRIGWIVGPESVIQRLADiKMQTDYGSSSISQQIAAEWFTNGLY-DEHLQFVR 384
Cdd:PLN02607 259 VEARGYKGVAerVHIvYSLSKDLGlPGFRVGTIYSYNDKVVTTAR-RMSSFTLVSSQTQHLLASMLSDEEFtENYIRTNR 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 385 NELKKRRDFMLHMLEKYCREIatwYEPTGGFYIWLHMNVPVSNRS------LFDKALQE-KILLNPGTLYDRSANQFLRL 457
Cdd:PLN02607 338 ERLRKRYEMIVQGLRRAGIEC---LKGNAGLFCWMNLSPLLETPTregelaLWDSILREvKLNISPGSSCHCSEPGWFRV 414
|
330 340
....*....|....*....|..
gi 1266725804 458 SYSYATLEEIEIGIKKLAQLIK 479
Cdd:PLN02607 415 CFANMSEDTLEVALKRIHRFMD 436
|
|
| PTZ00377 |
PTZ00377 |
alanine aminotransferase; Provisional |
156-299 |
2.88e-06 |
|
alanine aminotransferase; Provisional
Pssm-ID: 240391 [Multi-domain] Cd Length: 481 Bit Score: 49.58 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 156 GYEEPKGNLYLREKIAGYLKGH-GVYVSPDSILIVSGAIQALQLIsMGLLPKGAS--ILLEKPSY-LYSLNVFQSAGmRL 231
Cdd:PTZ00377 110 AYTDSAGYPFVRKAVAAFIERRdGVPKDPSDIFLTDGASSGIKLL-LQLLIGDPSdgVMIPIPQYpLYSAAITLLGG-KQ 187
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1266725804 232 IGIPMDE--------NGLNASYIAKYKKQFNASILYTI-PSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQD 299
Cdd:PTZ00377 188 VPYYLDEekgwsldqEELEEAYEQAVRNGITPRALVVInPG--NPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQE 262
|
|
| PRK11402 |
PRK11402 |
transcriptional regulator PhoB; |
15-79 |
1.71e-05 |
|
transcriptional regulator PhoB;
Pssm-ID: 183118 [Multi-domain] Cd Length: 241 Bit Score: 45.98 E-value: 1.71e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1266725804 15 PLYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIV 79
Cdd:PRK11402 9 LLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFV 73
|
|
| PRK08912 |
PRK08912 |
aminotransferase; |
166-349 |
1.73e-05 |
|
aminotransferase;
Pssm-ID: 181580 Cd Length: 387 Bit Score: 46.89 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 166 LREKIAG-YLKGHGVYVSPDS-ILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQSAGmrliGIP-------- 235
Cdd:PRK08912 68 LRQAVAAhYARFQGLDLDPETeVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAG----GVPrlvrlepp 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 236 ---MDENGLNASYIAKYKkqfnaSILytipsFHNPTNFSMNAEKRKE---VMEICNEIGLPIIEDAVYQDLWFDEPVSKP 309
Cdd:PRK08912 144 hwrLPRAALAAAFSPRTK-----AVL-----LNNPLNPAGKVFPREElalLAEFCQRHDAVAICDEVWEHVVFDGRRHIP 213
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1266725804 310 LKAYDK-NGIVLHIGSMSKVIS-PGLRIGWIVGPESVIQRLA 349
Cdd:PRK08912 214 LMTLPGmRERTVKIGSAGKIFSlTGWKVGFVCAAPPLLRVLA 255
|
|
| PLN03026 |
PLN03026 |
histidinol-phosphate aminotransferase; Provisional |
166-399 |
2.15e-05 |
|
histidinol-phosphate aminotransferase; Provisional
Pssm-ID: 178597 Cd Length: 380 Bit Score: 46.61 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 166 LREKIAGYlkgHGVyvSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYlySLNVFQSA--GMRLIGIP-MDENGLN 242
Cdd:PLN03026 91 LRAALAED---SGL--ESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTF--GMYVFDAAvnGAEVIKVPrTPDFSLD 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 243 ASYIAKYKKQFNASILYtIPSFHNPTNFSMNAEKRKEVMEicneigLPI--IEDAVYQDLWFDEPVSKPLKAYDkNGIVL 320
Cdd:PLN03026 164 VPRIVEAVETHKPKLLF-LTSPNNPDGSIISDDDLLKILE------LPIlvVLDEAYIEFSTQESRMKWVKKYD-NLIVL 235
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1266725804 321 HIGSMSKVISpGLRIGWIVGPESVIQRLADIKMQtdYGSSSISQQIAAEWFTNGLYdehLQFVRNELKKRRDFMLHMLE 399
Cdd:PLN03026 236 RTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALSNPKY---LEDVKNALVEERERLFGLLK 308
|
|
| PRK14999 |
PRK14999 |
histidine utilization repressor; Provisional |
8-69 |
6.82e-05 |
|
histidine utilization repressor; Provisional
Pssm-ID: 184961 [Multi-domain] Cd Length: 241 Bit Score: 44.15 E-value: 6.82e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1266725804 8 PDMSLASPLYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYI 69
Cdd:PRK14999 5 RSRSAPAPFYETVKQDICKKIAGGVWQPHDRIPSEAELVAQYGFSRMTINRALRELTDEGWL 66
|
|
| PLN02187 |
PLN02187 |
rooty/superroot1 |
148-356 |
9.76e-05 |
|
rooty/superroot1
Pssm-ID: 215119 [Multi-domain] Cd Length: 462 Bit Score: 44.72 E-value: 9.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 148 LLQSNVPLGYEEPKGNLYLREKIAGYLKGHGVY-VSPDSILIVSGAIQALQLISMGLLPKGASILLEKPSYLYSLNVFQS 226
Cdd:PLN02187 95 VLRSGKGNSYGPGAGILPARRAVADYMNRDLPHkLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAY 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 227 AGMRLIG---IPMDENGLNASYIAKYKKQFNASILYTIPSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQDLWFD 303
Cdd:PLN02187 175 SGLEVRKfdlLPEKEWEIDLEGIEAIADENTVAMVVINPN--NPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFG 252
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1266725804 304 EPVSKPLKAYDKNGIVLHIGSMSK-VISPGLRIGWIV--GPESVIQR---LADIKMQTD 356
Cdd:PLN02187 253 DNPFVSMGKFASIVPVLTLAGISKgWVVPGWKIGWIAlnDPEGVFETtkvLQSIKQNLD 311
|
|
| PLN02231 |
PLN02231 |
alanine transaminase |
157-299 |
1.10e-04 |
|
alanine transaminase
Pssm-ID: 177876 [Multi-domain] Cd Length: 534 Bit Score: 44.55 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 157 YEEPKGNLYLREKIAGYLKGH-GVYVSPDSILIVSGAIQALQLIsMGLLPKGAS--ILLEKPSY-LYSLNVFQSAGMrLI 232
Cdd:PLN02231 164 YSHSQGIKGLRDAIAAGIEARdGFPADPNDIFLTDGASPAVHMM-MQLLIRSEKdgILCPIPQYpLYSASIALHGGT-LV 241
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1266725804 233 GIPMDENGLNASYIAKYKKQFNASILYTI---------PSfhNPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQD 299
Cdd:PLN02231 242 PYYLDEATGWGLEISELKKQLEDARSKGItvralvvinPG--NPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQE 315
|
|
| PRK10225 |
PRK10225 |
Uxu operon transcriptional regulator; |
17-94 |
2.14e-04 |
|
Uxu operon transcriptional regulator;
Pssm-ID: 182318 [Multi-domain] Cd Length: 257 Bit Score: 43.09 E-value: 2.14e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1266725804 17 YKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNNNENTSTYAPPPN 94
Cdd:PRK10225 11 YQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGAGIYVLDSSGSHNTDSPDAN 88
|
|
| PRK03837 |
PRK03837 |
transcriptional regulator NanR; Provisional |
16-70 |
3.21e-04 |
|
transcriptional regulator NanR; Provisional
Pssm-ID: 235166 [Multi-domain] Cd Length: 241 Bit Score: 42.32 E-value: 3.21e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 1266725804 16 LYKQIETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIE 70
Cdd:PRK03837 14 LSEEVEERLEQMIRSGEFGPGDQLPSERELMAFFGVGRPAVREALQALKRKGLVQ 68
|
|
| PTZ00376 |
PTZ00376 |
aspartate aminotransferase; Provisional |
191-303 |
2.09e-03 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 240390 Cd Length: 404 Bit Score: 40.29 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1266725804 191 GAIQ-ALQLISMgLLPKGASILLEKPSYLYSLNVFQSAGMRLIGIP-MDEN--GLNASYIAKYKKQF-NASILYTIPSFH 265
Cdd:PTZ00376 108 GALRlGFEFLKR-FLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRyYDPKtkGLDFDGMLEDLRTApNGSVVLLHACAH 186
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1266725804 266 NPTNFSMNAEKRKEVMEICNEIGLPIIEDAVYQ-----DLWFD 303
Cdd:PTZ00376 187 NPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQgfasgDLDKD 229
|
|
| pdhR |
PRK09464 |
pyruvate dehydrogenase complex transcriptional repressor PdhR; |
20-82 |
8.51e-03 |
|
pyruvate dehydrogenase complex transcriptional repressor PdhR;
Pssm-ID: 181879 [Multi-domain] Cd Length: 254 Bit Score: 38.08 E-value: 8.51e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1266725804 20 IETYIKERIVNGEWTVGTKLPSQRDLAHTFGVNRSTIVMAFDELAVKGYIEGNGRKGTIVVNN 82
Cdd:PRK09464 15 IEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSS 77
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