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Conserved domains on  [gi|1326782469|gb|PMJ60937|]
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nicotinate-nicotinamide nucleotide adenylyltransferase [Vibrio splendidus]

Protein Classification

nicotinate-nicotinamide nucleotide adenylyltransferase( domain architecture ID 10793120)

nicotinate-nicotinamide nucleotide adenylyltransferase catalyzes the coupling of ATP and nicotinate-nucleotide to nicotinic acid adenine dinucleotide, and or may catalyze the coupling of ATP and nicotinamide-nucleotide to NAD+

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK08887 PRK08887
nicotinate-nicotinamide nucleotide adenylyltransferase;
1-173 6.94e-119

nicotinate-nicotinamide nucleotide adenylyltransferase;


:

Pssm-ID: 181576 [Multi-domain]  Cd Length: 174  Bit Score: 333.23  E-value: 6.94e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   1 MEKIAIFGSAFNPPSLGHKSVIDSLAHFDKILLVPSIAHAWGKEMLDFDTRCQLVNAFISDLSLDQVELSLIEKSLFIPG 80
Cdd:PRK08887    1 MKKIAVFGSAFNPPSLGHKSVIESLSHFDLVLLVPSIAHAWGKTMLDYETRCQLVDAFIQDLGLSNVQRSDIEQELYAPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  81 ESVTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITERWSVMACPEKVKIRSTDIRNALQNGSNVAKLSTKSV 160
Cdd:PRK08887   81 ESVTTYALLTRLQELYPEADLTFVIGPDNFLKFAKFYKADEITQRWTVMACPEKVPIRSTDIRNALQNGKDISHLTTPGV 160
                         170
                  ....*....|...
gi 1326782469 161 TKILQDSGLYTIM 173
Cdd:PRK08887  161 ARLLKEHQLYTEP 173
 
Name Accession Description Interval E-value
PRK08887 PRK08887
nicotinate-nicotinamide nucleotide adenylyltransferase;
1-173 6.94e-119

nicotinate-nicotinamide nucleotide adenylyltransferase;


Pssm-ID: 181576 [Multi-domain]  Cd Length: 174  Bit Score: 333.23  E-value: 6.94e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   1 MEKIAIFGSAFNPPSLGHKSVIDSLAHFDKILLVPSIAHAWGKEMLDFDTRCQLVNAFISDLSLDQVELSLIEKSLFIPG 80
Cdd:PRK08887    1 MKKIAVFGSAFNPPSLGHKSVIESLSHFDLVLLVPSIAHAWGKTMLDYETRCQLVDAFIQDLGLSNVQRSDIEQELYAPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  81 ESVTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITERWSVMACPEKVKIRSTDIRNALQNGSNVAKLSTKSV 160
Cdd:PRK08887   81 ESVTTYALLTRLQELYPEADLTFVIGPDNFLKFAKFYKADEITQRWTVMACPEKVPIRSTDIRNALQNGKDISHLTTPGV 160
                         170
                  ....*....|...
gi 1326782469 161 TKILQDSGLYTIM 173
Cdd:PRK08887  161 ARLLKEHQLYTEP 173
NMNAT cd02165
Nicotinamide/nicotinate mononucleotide adenylyltransferase; Nicotinamide/nicotinate ...
4-170 5.11e-39

Nicotinamide/nicotinate mononucleotide adenylyltransferase; Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.


Pssm-ID: 185680 [Multi-domain]  Cd Length: 192  Bit Score: 131.21  E-value: 5.11e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   4 IAIFGSAFNPPSLGHKSVIDSLAHF---DKILLVPSIAHAWGK-EMLDFDTRCQLVNAFISDLslDQVELSLIEKSlfiP 79
Cdd:cd02165     1 IALFGGSFDPPHLGHLAIAEEALEElglDRVLLLPSANPPHKPpKPASFEHRLEMLKLAIEDN--PKFEVSDIEIK---R 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  80 GESVTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITERWSVMACPEK------------------------- 134
Cdd:cd02165    76 DGPSYTIDTLEELRERYPNAELYFIIGSDNLIRLPKWYDWEELLSLVHLVVAPRPgypiedasleklllpggriilldnp 155
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1326782469 135 -VKIRSTDIRNALQNGSNVAKLSTKSVTKILQDSGLY 170
Cdd:cd02165   156 lLNISSTEIRERLKNGKSIRYLLPPAVADYIKEHGLY 192
NadD COG1057
Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; ...
1-170 1.43e-32

Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; Nicotinate-nucleotide adenylyltransferase NadD is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 440677 [Multi-domain]  Cd Length: 197  Bit Score: 114.83  E-value: 1.43e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   1 MEKIAIFGSAFNPPSLGHKSVIDSLAH---FDKILLVPSIAHAW--GKEMLDFDTRCQLVNAFISDlsLDQVELSLIEks 75
Cdd:COG1057     1 MMRIGIFGGTFDPIHIGHLALAEEAAEqlgLDEVIFVPAGQPPHkkHKPLASAEHRLAMLRLAIAD--NPRFEVSDIE-- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  76 LFIPGESvTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITERWSVMACP------------------EKVK- 136
Cdd:COG1057    77 LERPGPS-YTIDTLRELREEYPDAELYFIIGADALLQLPKWKRWEELLELAHLVVVPrpgyeldeleelealkpgGRIIl 155
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1326782469 137 -------IRSTDIRNALQNGSNVAKLSTKSVTKILQDSGLY 170
Cdd:COG1057   156 ldvplldISSTEIRERLAEGKSIRYLVPDAVEDYIREHGLY 196
TIGR00482 TIGR00482
nicotinate (nicotinamide) nucleotide adenylyltransferase; This model represents the ...
6-170 4.42e-16

nicotinate (nicotinamide) nucleotide adenylyltransferase; This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 273101 [Multi-domain]  Cd Length: 193  Bit Score: 71.97  E-value: 4.42e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   6 IFGSAFNPPSLGHKSVIDSLAH---FDKILLVPSI--AHAWGKEMLDFDTRCQLVNAFISDLSLDQVELSLIEKslfipG 80
Cdd:TIGR00482   1 LFGGSFDPIHYGHLLLAEEALDhldLDKVIFVPTAnpPHKKTYEAASSHHRLAMLKLAIEDNPKFEVDDFEIKR-----G 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  81 ESVTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITE--RWSVMACPEK------------------------ 134
Cdd:TIGR00482  76 GPSYTIDTLKHLKKKYPDVELYFIIGADALRSFPLWKDWQELLElvHLVIVPRPGYtldkallekailrmhhgnltllhn 155
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1326782469 135 --VKIRSTDIRNALQNGSNVAKLSTKSVTKILQDSGLY 170
Cdd:TIGR00482 156 prVPISSTEIRQRIRQGKSIEYLLPDPVIKYIKQHGLY 193
CTP_transf_like pfam01467
Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; ...
6-145 1.21e-07

Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase. It also includes putative adenylyltransferases, and FAD synthases.


Pssm-ID: 396172 [Multi-domain]  Cd Length: 134  Bit Score: 48.08  E-value: 1.21e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   6 IFGSAFNPPSLGHKSVID-SLAHFDK--ILLVPS--IAHAWGKEMLDFDTRCQLVNAFISDLsldqvelsliekslfiPG 80
Cdd:pfam01467   1 LFGGTFDPIHLGHLRLLEqAKELFDEdlIVGVPSdePPHKLKRPLFSAEERLEMLELAKWVD----------------EV 64
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1326782469  81 ESVTTYVVLSELQKLHR-DAeltFVIGPDNFFKFSsfYKSDEI---------TERWSVMACPEKVKIRSTDIRNA 145
Cdd:pfam01467  65 IVVAPWELTRELLKELNpDV---LVIGADSLLDFW--YELDEIlgnvklvvvVRPVFFIPLKPTNGISSTDIRER 134
 
Name Accession Description Interval E-value
PRK08887 PRK08887
nicotinate-nicotinamide nucleotide adenylyltransferase;
1-173 6.94e-119

nicotinate-nicotinamide nucleotide adenylyltransferase;


Pssm-ID: 181576 [Multi-domain]  Cd Length: 174  Bit Score: 333.23  E-value: 6.94e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   1 MEKIAIFGSAFNPPSLGHKSVIDSLAHFDKILLVPSIAHAWGKEMLDFDTRCQLVNAFISDLSLDQVELSLIEKSLFIPG 80
Cdd:PRK08887    1 MKKIAVFGSAFNPPSLGHKSVIESLSHFDLVLLVPSIAHAWGKTMLDYETRCQLVDAFIQDLGLSNVQRSDIEQELYAPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  81 ESVTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITERWSVMACPEKVKIRSTDIRNALQNGSNVAKLSTKSV 160
Cdd:PRK08887   81 ESVTTYALLTRLQELYPEADLTFVIGPDNFLKFAKFYKADEITQRWTVMACPEKVPIRSTDIRNALQNGKDISHLTTPGV 160
                         170
                  ....*....|...
gi 1326782469 161 TKILQDSGLYTIM 173
Cdd:PRK08887  161 ARLLKEHQLYTEP 173
NMNAT cd02165
Nicotinamide/nicotinate mononucleotide adenylyltransferase; Nicotinamide/nicotinate ...
4-170 5.11e-39

Nicotinamide/nicotinate mononucleotide adenylyltransferase; Nicotinamide/nicotinate mononucleotide (NMN/ NaMN)adenylyltransferase (NMNAT). NMNAT represents the primary bacterial and eukaryotic adenylyltransferases for nicotinamide-nucleotide and for the deamido form, nicotinate nucleotide. It is an indispensable enzyme in the biosynthesis of NAD(+) and NADP(+). Nicotinamide-nucleotide adenylyltransferase synthesizes NAD via the salvage pathway, while nicotinate-nucleotide adenylyltransferase synthesizes the immediate precursor of NAD via the de novo pathway. Human NMNAT displays unique dual substrate specificity toward both NMN and NaMN, and can participate in both de novo and salvage pathways of NAD synthesis.


Pssm-ID: 185680 [Multi-domain]  Cd Length: 192  Bit Score: 131.21  E-value: 5.11e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   4 IAIFGSAFNPPSLGHKSVIDSLAHF---DKILLVPSIAHAWGK-EMLDFDTRCQLVNAFISDLslDQVELSLIEKSlfiP 79
Cdd:cd02165     1 IALFGGSFDPPHLGHLAIAEEALEElglDRVLLLPSANPPHKPpKPASFEHRLEMLKLAIEDN--PKFEVSDIEIK---R 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  80 GESVTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITERWSVMACPEK------------------------- 134
Cdd:cd02165    76 DGPSYTIDTLEELRERYPNAELYFIIGSDNLIRLPKWYDWEELLSLVHLVVAPRPgypiedasleklllpggriilldnp 155
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1326782469 135 -VKIRSTDIRNALQNGSNVAKLSTKSVTKILQDSGLY 170
Cdd:cd02165   156 lLNISSTEIRERLKNGKSIRYLLPPAVADYIKEHGLY 192
NadD COG1057
Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; ...
1-170 1.43e-32

Nicotinate-nucleotide adenylyltransferase NadD [Coenzyme transport and metabolism]; Nicotinate-nucleotide adenylyltransferase NadD is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 440677 [Multi-domain]  Cd Length: 197  Bit Score: 114.83  E-value: 1.43e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   1 MEKIAIFGSAFNPPSLGHKSVIDSLAH---FDKILLVPSIAHAW--GKEMLDFDTRCQLVNAFISDlsLDQVELSLIEks 75
Cdd:COG1057     1 MMRIGIFGGTFDPIHIGHLALAEEAAEqlgLDEVIFVPAGQPPHkkHKPLASAEHRLAMLRLAIAD--NPRFEVSDIE-- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  76 LFIPGESvTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITERWSVMACP------------------EKVK- 136
Cdd:COG1057    77 LERPGPS-YTIDTLRELREEYPDAELYFIIGADALLQLPKWKRWEELLELAHLVVVPrpgyeldeleelealkpgGRIIl 155
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 1326782469 137 -------IRSTDIRNALQNGSNVAKLSTKSVTKILQDSGLY 170
Cdd:COG1057   156 ldvplldISSTEIRERLAEGKSIRYLVPDAVEDYIREHGLY 196
nadD PRK00071
nicotinate-nucleotide adenylyltransferase;
1-170 5.87e-19

nicotinate-nucleotide adenylyltransferase;


Pssm-ID: 234611 [Multi-domain]  Cd Length: 203  Bit Score: 79.88  E-value: 5.87e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   1 MEKIAIFGSAFNPPSLGHKSVIDSLAHF---DKILLVPSiAHAWGK---EMLDFDTRCQLVNAFISD---LSLDQVELSL 71
Cdd:PRK00071    3 MKRIGLFGGTFDPPHYGHLAIAEEAAERlglDEVWFLPN-PGPPHKpqkPLAPLEHRLAMLELAIADnprFSVSDIELER 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  72 iekslfiPGESVTtYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITERWSVMACP-----------EKVK---- 136
Cdd:PRK00071   82 -------PGPSYT-IDTLRELRARYPDVELVFIIGADALAQLPRWKRWEEILDLVHFVVVPrpgyplealalPALQqlle 153
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1326782469 137 --------------IRSTDIRNALQNGSNVAKLSTKSVTKILQDSGLY 170
Cdd:PRK00071  154 aagaitlldvpllaISSTAIRERIKEGRPIRYLLPEAVLDYIEKHGLY 201
TIGR00482 TIGR00482
nicotinate (nicotinamide) nucleotide adenylyltransferase; This model represents the ...
6-170 4.42e-16

nicotinate (nicotinamide) nucleotide adenylyltransferase; This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]


Pssm-ID: 273101 [Multi-domain]  Cd Length: 193  Bit Score: 71.97  E-value: 4.42e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   6 IFGSAFNPPSLGHKSVIDSLAH---FDKILLVPSI--AHAWGKEMLDFDTRCQLVNAFISDLSLDQVELSLIEKslfipG 80
Cdd:TIGR00482   1 LFGGSFDPIHYGHLLLAEEALDhldLDKVIFVPTAnpPHKKTYEAASSHHRLAMLKLAIEDNPKFEVDDFEIKR-----G 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469  81 ESVTTYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEITE--RWSVMACPEK------------------------ 134
Cdd:TIGR00482  76 GPSYTIDTLKHLKKKYPDVELYFIIGADALRSFPLWKDWQELLElvHLVIVPRPGYtldkallekailrmhhgnltllhn 155
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1326782469 135 --VKIRSTDIRNALQNGSNVAKLSTKSVTKILQDSGLY 170
Cdd:TIGR00482 156 prVPISSTEIRQRIRQGKSIEYLLPDPVIKYIKQHGLY 193
CTP_transf_like pfam01467
Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; ...
6-145 1.21e-07

Cytidylyltransferase-like; This family includes: Cholinephosphate cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase. It also includes putative adenylyltransferases, and FAD synthases.


Pssm-ID: 396172 [Multi-domain]  Cd Length: 134  Bit Score: 48.08  E-value: 1.21e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   6 IFGSAFNPPSLGHKSVID-SLAHFDK--ILLVPS--IAHAWGKEMLDFDTRCQLVNAFISDLsldqvelsliekslfiPG 80
Cdd:pfam01467   1 LFGGTFDPIHLGHLRLLEqAKELFDEdlIVGVPSdePPHKLKRPLFSAEERLEMLELAKWVD----------------EV 64
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1326782469  81 ESVTTYVVLSELQKLHR-DAeltFVIGPDNFFKFSsfYKSDEI---------TERWSVMACPEKVKIRSTDIRNA 145
Cdd:pfam01467  65 IVVAPWELTRELLKELNpDV---LVIGADSLLDFW--YELDEIlgnvklvvvVRPVFFIPLKPTNGISSTDIRER 134
nadD PRK07152
nicotinate-nucleotide adenylyltransferase;
3-122 2.51e-05

nicotinate-nucleotide adenylyltransferase;


Pssm-ID: 235947 [Multi-domain]  Cd Length: 342  Bit Score: 43.40  E-value: 2.51e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1326782469   3 KIAIFGSAFNPPSLGH----KSVIDSLAhFDKILLVPSIAHAwgkemldFDTRCqlvNAFISDLSLDQVELSLIEK---- 74
Cdd:PRK07152    2 KIAIFGGSFDPIHKGHiniaKKAIKKLK-LDKLFFVPTYINP-------FKKKQ---KASNGEHRLNMLKLALKNLpkme 70
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1326782469  75 -SLF-IPGESVT-TYVVLSELQKLHRDAELTFVIGPDNFFKFSSFYKSDEI 122
Cdd:PRK07152   71 vSDFeIKRQNVSyTIDTIKYFKKKYPNDEIYFIIGSDNLEKFKKWKNIEEI 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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