NCBI Conserved Domain Search

Conserved domains on [gi|1331807891|gb|PNI67317|]

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PRG4 isoform 1 [Pan troglodytes]

Protein Classification

SO and HX domain-containing protein( domain architecture ID 10640906)

SO and HX domain-containing protein

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1141-1401

1.17e-44

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs). This CD contains 4 instances of the repeat.

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1141 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1219
Cdd:cd00094      1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1220 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1298
Cdd:cd00094     79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1299 rRRFERAigpsqthtirihysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1378
Cdd:cd00094    137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                          250       260
                   ....*....|....*....|...
gi 1331807891 1379 PSRTARAITTRSGqtlSKVWYNC 1401
Cdd:cd00094    175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247 super family

cl33720

large tegument protein UL36; Provisional

463-909

2.11e-20

large tegument protein UL36; Provisional

The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 98.86 E-value: 2.11e-20

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKkpapTTPKEPAPTTPKEPA-PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PHA03247  2560 PPAAPDRSVPPPRPAPRPSEPA----VTSRARRPDAPPQSArPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAA 2635

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  542 APTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTP-TTPEELAPTT----PEEPAPTTPEEPAPT 616
Cdd:PHA03247  2636 NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRrAARPTVGSLTsladPPPPPPTPEPAPHAL 2715

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  617 TPEEPApttleeptpttpeEPAPTTPKTAAPNTPKEPAPttpkEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPA-- 694
Cdd:PHA03247  2716 VSATPL-------------PPGPAAARQASPALPAAPAP----PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAag 2778

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  695 -PKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPkgTAPTTPKGTAPTTPKGTAPTTPKETAST 773
Cdd:PHA03247  2779 pPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPL--PPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  774 TPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAPTIPKEPAPTTPKKPAPTTPETPPP 849
Cdd:PHA03247  2857 APGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPP 2936

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  850 TTSEVSTPTTTKEPTTIHKSPDESTPELSA-EPTPKALENSPKEPGVPTTKTPAATKPEMT 909
Cdd:PHA03247  2937 PRPQPPLAPTTDPAGAGEPSGAVPQPWLGAlVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1331807891    66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.87e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.87e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1331807891    26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

PHA03247 super family

cl33720

large tegument protein UL36; Provisional

191-593

1.94e-13

large tegument protein UL36; Provisional

The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 75.75 E-value: 1.94e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  191 TTPDTSTTQHNKVTTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKE---- 266
Cdd:PHA03247  2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGraaq 2675

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  267 ----TQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTT 342
Cdd:PHA03247  2676 asspPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPA 2755

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  343 PKEPAPTTPKEPAPTTTKSLHPPLPRSLHPPLPRSLHPPPPRSLHPPLPRSLHPPPPSLHPPLPRSLHPPPQEPAPTPPp 422
Cdd:PHA03247  2756 RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA- 2834

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  423 ptspttpKKPAPTTPKEPAPTTpkEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 502
Cdd:PHA03247  2835 -------QPTAPPPPPGPPPPS--LPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQP 2905

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  503 APTTTKSAPTTPKEPsPTTTKEPAPTTPKEPAPTTPKKPAPTT-------PKETAPTTPKEPAPTTTKKPAPTTPKEPAP 575
Cdd:PHA03247  2906 ERPPQPQAPPPPQPQ-PQPPPPPQPQPPPPPPPRPQPPLAPTTdpagagePSGAVPQPWLGALVPGRVAVPRFRVPQPAP 2984

                          410
                   ....*....|....*...
gi 1331807891  576 TTPKETAPTTPEKLTPTT 593
Cdd:PHA03247  2985 SREAPASSTPPLTGHSLS 3002

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1141-1401

1.17e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1141 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1219
Cdd:cd00094      1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1220 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1298
Cdd:cd00094     79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1299 rRRFERAigpsqthtirihysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1378
Cdd:cd00094    137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                          250       260
                   ....*....|....*....|...
gi 1331807891 1379 PSRTARAITTRSGqtlSKVWYNC 1401
Cdd:cd00094    175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

463-909

2.11e-20

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 98.86 E-value: 2.11e-20

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKkpapTTPKEPAPTTPKEPA-PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PHA03247  2560 PPAAPDRSVPPPRPAPRPSEPA----VTSRARRPDAPPQSArPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAA 2635

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  542 APTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTP-TTPEELAPTT----PEEPAPTTPEEPAPT 616
Cdd:PHA03247  2636 NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRrAARPTVGSLTsladPPPPPPTPEPAPHAL 2715

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  617 TPEEPApttleeptpttpeEPAPTTPKTAAPNTPKEPAPttpkEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPA-- 694
Cdd:PHA03247  2716 VSATPL-------------PPGPAAARQASPALPAAPAP----PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAag 2778

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  695 -PKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPkgTAPTTPKGTAPTTPKGTAPTTPKETAST 773
Cdd:PHA03247  2779 pPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPL--PPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  774 TPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAPTIPKEPAPTTPKKPAPTTPETPPP 849
Cdd:PHA03247  2857 APGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPP 2936

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  850 TTSEVSTPTTTKEPTTIHKSPDESTPELSA-EPTPKALENSPKEPGVPTTKTPAATKPEMT 909
Cdd:PHA03247  2937 PRPQPPLAPTTDPAGAGEPSGAVPQPWLGAlVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1331807891    66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.87e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.87e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1331807891    26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.88e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.88e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 1331807891   69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.93e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.93e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1331807891   29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

PHA03247

large tegument protein UL36; Provisional

191-593

1.94e-13

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 75.75 E-value: 1.94e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  191 TTPDTSTTQHNKVTTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKE---- 266
Cdd:PHA03247  2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGraaq 2675

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  267 ----TQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTT 342
Cdd:PHA03247  2676 asspPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPA 2755

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  343 PKEPAPTTPKEPAPTTTKSLHPPLPRSLHPPLPRSLHPPPPRSLHPPLPRSLHPPPPSLHPPLPRSLHPPPQEPAPTPPp 422
Cdd:PHA03247  2756 RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA- 2834

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  423 ptspttpKKPAPTTPKEPAPTTpkEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 502
Cdd:PHA03247  2835 -------QPTAPPPPPGPPPPS--LPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQP 2905

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  503 APTTTKSAPTTPKEPsPTTTKEPAPTTPKEPAPTTPKKPAPTT-------PKETAPTTPKEPAPTTTKKPAPTTPKEPAP 575
Cdd:PHA03247  2906 ERPPQPQAPPPPQPQ-PQPPPPPQPQPPPPPPPRPQPPLAPTTdpagagePSGAVPQPWLGALVPGRVAVPRFRVPQPAP 2984

                          410
                   ....*....|....*...
gi 1331807891  576 TTPKETAPTTPEKLTPTT 593
Cdd:PHA03247  2985 SREAPASSTPPLTGHSLS 3002

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1193-1237

9.62e-11

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metalloproteinases (TIMPs).

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.62e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1331807891  1193 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1237
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1193-1235

1.06e-08

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metallopeptidases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of metallopeptidases (TIMPs).

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.06e-08

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1331807891 1193 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1235
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

472-679

8.06e-06

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 50.15 E-value: 8.06e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  472 PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEtaP 551
Cdd:NF033839   281 QDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQ--P 358

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  552 TTPKepAPTTTKKPAPTTPKEPAPTTPKETAPTTPE------KLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTT 625
Cdd:NF033839   359 EKPK--PEVKPQPEKPKPEVKPQPETPKPEVKPQPEkpkpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPE 436

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1331807891  626 LEEPTPTTPEEPAPTTPKtAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 679
Cdd:NF033839   437 KPKPEVKPQPEKPKPEVK-PQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKP 489

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

463-554

8.59e-06

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 49.85 E-value: 8.59e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPA-PTTPKEPAPTTTKSAPTTPKEPSPTTTKepapttPKEPAPTTPKKP 541
Cdd:COG3266    265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSaVALPAAPAAAAAAAAPAEAAAPQPTAAK------PVVTETAAPAAP 338

                           90
                   ....*....|....
gi 1331807891  542 APTTPKET-APTTP 554
Cdd:COG3266    339 APEAAAAAaAPAAP 352

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

466-535

2.62e-05

UV excision repair protein Rad23; All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 48.35 E-value: 2.62e-05

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  466 TTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 535
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGS 144

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

434-673

5.43e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.46 E-value: 5.43e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  434 PTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPtttksAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTT 513
Cdd:NF033839   281 QDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP-----EPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  514 PKEPSPTTTKEPAPTTPK---EPAPTTPK---KPAPTTPK-ETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTP 586
Cdd:NF033839   356 PQPEKPKPEVKPQPEKPKpevKPQPETPKpevKPQPEKPKpEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  587 E------KLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPA-PTTPK 659
Cdd:NF033839   436 EkpkpevKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSnQASTN 515

                          250
                   ....*....|....
gi 1331807891  660 EPAPTTPKETAPTT 673
Cdd:NF033839   516 EKATNKPKKSLPST 529

Streccoc_I_II

NF033804

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ...

749-903

6.82e-05

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins with a glucan-binding domain, two types of repetitive regions, an isopeptide bond-forming domain associated with shear resistance, and a C-terminal LPXTG motif for anchoring to the cell wall. They occur in oral Streptococci, and tend to be major cell surface adhesins. Members of this family include SspA and SspB from Streptococcus gordonii, antigen I/II from S. mutans, etc.

Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 47.63 E-value: 6.82e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  749 TTPKGTAPTTPkgTAPTTPKETAST--TPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETA 824
Cdd:NF033804   828 TKEKPTPPVAP--TAPQAPTYEVEKplEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEPT 905

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  825 PTI--PKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPA 902
Cdd:NF033804   906 PPVktPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTPP 982


                   .
gi 1331807891  903 A 903
Cdd:NF033804   983 A 983

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

462-852

1.90e-04

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.91 E-value: 1.90e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPT--TPKEPAPTTPK 539
Cdd:pfam03154  170 QPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPL 249

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  540 KPAPTT-PKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTP 618
Cdd:pfam03154  250 QPMTQPpPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPP 329

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  619 EEPAPTTLEEPTPTTpeepapttpktaapnTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP-----TTPKKP 693
Cdd:pfam03154  330 SQSQLQSQQPPREQP---------------LPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPfqmnsNLPPPP 394

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  694 APKELAPTTTKEPtsttsdkPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETAST 773
Cdd:pfam03154  395 ALKPLSSLSTHHP-------PSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPF 467

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  774 TPKGTAPTTlkepAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAPTIP-KEPAPTTPKKPapttPETPPPTTS 852
Cdd:pfam03154  468 VPGGPPPIT----PPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQiKEEALDEAEEP----ESPPPPPRS 539

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

532-696

1.24e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.24e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  532 EPAPTTPKKPAPTTPKETapttpKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTpekltptTPEELAPTTPEEPAPTTPE 611
Cdd:NF040712   189 DPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAG-------TPDDLASARRRRAGVEQPE 256

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  612 EPAPTTPEEPAPTTLEEPTPTTpeepapttpktaAPNTPKEPAPTTPKEPAPTTPK-ETAPTTPKGTAPTTLKEPAPTTP 690
Cdd:NF040712   257 DEPVGPGAAPAAEPDEATRDAG------------EPPAPGAAETPEAAEPPAPAPAaPAAPAAPEAEEPARPEPPPAPKP 324


                   ....*.
gi 1331807891  691 KKPAPK 696
Cdd:NF040712   325 KRRRRR 330

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

509-666

2.45e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.68 E-value: 2.45e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  509 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPek 588
Cdd:NF040712   193 GRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEP-- 270

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  589 lTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPtpttpeepapttpktAAPNTPKEPAPTTPKEPA--PTTP 666
Cdd:NF040712   271 -DEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEA---------------EEPARPEPPPAPKPKRRRrrASVP 334

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

493-622

2.72e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.68 E-value: 2.72e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  493 EPAPTTPKEPAPTTTKSAPT----TPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTtpkEPAPTTTKKPAPT 568
Cdd:NF040712   189 DPDFGRPLRPLATVPRLAREpadaRPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGV---EQPEDEPVGPGAA 265

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  569 TPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPA-PTTPEEPAPTTPEEPA 622
Cdd:NF040712   266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPP 320

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

256-618

4.95e-03

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 41.29 E-value: 4.95e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  256 DGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKE------PTATTIK 329
Cdd:pfam03154  153 DNESDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNqtqstaAPHTLIQ 232

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  330 SAPT--TPKEPAPTTPKEPAPTTPK----EPAPTTTKSLH---PPLPRSLHPPLPRSLHPPPPRSLHPPLPRSLHPPPPS 400
Cdd:pfam03154  233 QTPTlhPQRLPSPHPPLQPMTQPPPpsqvSPQPLPQPSLHgqmPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPG 312

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  401 LHPPLPRSLHPPPQEPAPTPPPPTSPTTPKKPAPTTPK-----EPAPTTP----------KEPAPTTTKSAPTTTKE-PA 464
Cdd:pfam03154  313 PSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLsmphiKPPPTTPipqlpnpqshKHPPHLSGPSPFQMNSNlPP 392

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  465 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPApT 544
Cdd:pfam03154  393 PPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPG-G 471

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1331807891  545 TPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPekLTPTTPEELAPTTPEEPAPTTPEEPAPTTP 618
Cdd:pfam03154  472 PPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCP--LPPVQIKEEALDEAEEPESPPPPPRSPSPE 543

Name

Accession

Description

Interval

E-value

cd00094

Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1141-1401

1.17e-44

Pssm-ID: 238046 [Multi-domain] Cd Length: 194 Bit Score: 160.17 E-value: 1.17e-44

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1141 TNICNGKPVDGLTTLRnGTLVAFRGHYFWMLSPFSPPSPARRITEVW-GIPSPIDTVFTRCNcEGKTFFFKDSQYWRFTN 1219
Cdd:cd00094      1 PDACDPLSFDAVTTLR-GELYFFKGRYFWRLSPGKPPGSPFLISSFWpSLPSPVDAAFERPD-TGKIYFFKGDKYWVYTG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1220 DIKDAGYPKPIFK-GFGGLTGQIVAALSTAKyknwPESVYFFKRGGSIQQYIYKQEPVQKCPgrrpalnypvygettqvr 1298
Cdd:cd00094     79 KNLEPGYPKPISDlGFPPTVKQIDAALRWPD----NGKTYFFKGDKYWRYDEKTQKMDPGYP------------------ 136

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891 1299 rRRFERAigpsqthtirihysparlayqdkgvlhnevkvsilWRGLPNVVTSAislpnIRKPDGYdYYAFSKDQYYNIDV 1378
Cdd:cd00094    137 -KLIETD-----------------------------------FPGVPDKVDAA-----FRWLDGY-YYFFKGDQYWRFDP 174

                          250       260
                   ....*....|....*....|...
gi 1331807891 1379 PSRTARAITTRSGqtlSKVWYNC 1401
Cdd:cd00094    175 RSKEVRVGYPLKI---SSDWLGC 194

PHA03247

large tegument protein UL36; Provisional

463-909

2.11e-20

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 98.86 E-value: 2.11e-20

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKkpapTTPKEPAPTTPKEPA-PTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PHA03247  2560 PPAAPDRSVPPPRPAPRPSEPA----VTSRARRPDAPPQSArPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAA 2635

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  542 APTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTP-TTPEELAPTT----PEEPAPTTPEEPAPT 616
Cdd:PHA03247  2636 NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRrAARPTVGSLTsladPPPPPPTPEPAPHAL 2715

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  617 TPEEPApttleeptpttpeEPAPTTPKTAAPNTPKEPAPttpkEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPA-- 694
Cdd:PHA03247  2716 VSATPL-------------PPGPAAARQASPALPAAPAP----PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAag 2778

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  695 -PKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPkgTAPTTPKGTAPTTPKGTAPTTPKETAST 773
Cdd:PHA03247  2779 pPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPL--PPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  774 TPKGT----APTTLKEPAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAPTIPKEPAPTTPKKPAPTTPETPPP 849
Cdd:PHA03247  2857 APGGDvrrrPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPP 2936

                          410       420       430       440       450       460
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  850 TTSEVSTPTTTKEPTTIHKSPDESTPELSA-EPTPKALENSPKEPGVPTTKTPAATKPEMT 909
Cdd:PHA03247  2937 PRPQPPLAPTTDPAGAGEPSGAVPQPWLGAlVPGRVAVPRFRVPQPAPSREAPASSTPPLT 2997

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

66-108

1.15e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 83.19 E-value: 1.15e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1331807891    66 AELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVH 108
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

PHA03247

large tegument protein UL36; Provisional

320-776

2.87e-19

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 95.01 E-value: 2.87e-19

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  320 PKEPTATTIKSAPTTPKEPA-PTTPKEPAPTTPKEPAPTTTkslhPPLPRSLHPPLPRSLHPPPPRSLHPPLPRSLHPPP 398
Cdd:PHA03247  2577 PSEPAVTSRARRPDAPPQSArPRAPVDDRGDPRGPAPPSPL----PPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERP 2652

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  399 PSLHPPLPRSLHPPPQEPAPTPPPPTSPTTPKKPAPTTPKEPAPTTPKEPAPTTtksaptttkEPAPTTTKSAPTTPKEP 478
Cdd:PHA03247  2653 RDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPP---------TPEPAPHALVSATPLPP 2723

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  479 APTAPKKPAPTTPKEPAPttPKEPAPTTTKSAPTTPKEPsPTTTKEPAPTTPKEPApttpkkpapTTPKETAPTTPKEPA 558
Cdd:PHA03247  2724 GPAAARQASPALPAAPAP--PAVPAGPATPGGPARPARP-PTTAGPPAPAPPAAPA---------AGPPRRLTRPAVASL 2791

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  559 PTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEelapTTPEEPAPTTPEEPaPTTPEEPAPTTLEEPTPTTPEEPA 638
Cdd:PHA03247  2792 SESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPL----PPPTSAQPTAPPPP-PGPPPPSLPLGGSVAPGGDVRRRP 2866

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  639 PTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPttLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTT 718
Cdd:PHA03247  2867 PSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPER--PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLA 2944

                          410       420       430       440       450
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1331807891  719 PKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGT-APTTPKETASTTPK 776
Cdd:PHA03247  2945 PTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREApASSTPPLTGHSLSR 3003

PHA03247

large tegument protein UL36; Provisional

288-695

7.57e-19

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 93.85 E-value: 7.57e-19

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  288 PTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPT----TPKEPAPTTTKSLH 363
Cdd:PHA03247  2569 PPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSpspaANEPDPHPPPTVPP 2648

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  364 PPLPRSLHPP----LPRSLHPPPPRSLHPPLPRSLHPPPPSLHPPLPRSL-----HPPPQEPaptPPPPTSPTTPKKPAP 434
Cdd:PHA03247  2649 PERPRDDPAPgrvsRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLadpppPPPTPEP---APHALVSATPLPPGP 2725

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  435 TTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPkePAPTAPKKPAPTtpkePAPTTPKEPAPTTTKSAPTTP 514
Cdd:PHA03247  2726 AAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGP--PAPAPPAAPAAG----PPRRLTRPAVASLSESRESLP 2799

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  515 KEPSPTTTkePAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTP-KETAPTTPEKLTPTT 593
Cdd:PHA03247  2800 SPWDPADP--PAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDvRRRPPSRSPAAKPAA 2877

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  594 PEELAPTTPEEPAPTTPEEPAPTTPEEPApttleeptpttpeepaptTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTT 673
Cdd:PHA03247  2878 PARPPVRRLARPAVSRSTESFALPPDQPE------------------RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP 2939

                          410       420
                   ....*....|....*....|...
gi 1331807891  674 PKGTAPTTLKEPAP-TTPKKPAP 695
Cdd:PHA03247  2940 QPPLAPTTDPAGAGePSGAVPQP 2962

smart00201

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from ...

26-68

8.87e-19

Somatomedin B -like domains; Somatomedin-B is a peptide, proteolytically excised from vitronectin, that is a growth hormone-dependent serum factor with protease-inhibiting activity.

Pssm-ID: 197571 Cd Length: 43 Bit Score: 80.88 E-value: 8.87e-19

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|...
gi 1331807891    26 DLSSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAEL 68
Cdd:smart00201    1 AIGSCKGRCGESFNEGNACRCDALCLSYGDCCTDYESVCKKEV 43

PHA03247

large tegument protein UL36; Provisional

320-835

2.24e-18

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 92.31 E-value: 2.24e-18

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  320 PKEPTATTIKSAPTTPKEPAPTTPKEPAPT-----TPKEPAP----TTTKSLH-----------PPLPRSLHPPLP-RSL 378
Cdd:PHA03247  2489 PFAAGAAPDPGGGGPPDPDAPPAPSRLAPAilpdePVGEPVHprmlTWIRGLEelasddagdppPPLPPAAPPAAPdRSV 2568

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  379 HPPPPRSLHPPLPRSLHPPPPSLHPPLPRSLHPPPQEPAPTPPPPTSPTTPKKPAPTTP---KEPAPTTPKEPAPTTTKS 455
Cdd:PHA03247  2569 PPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPppsPSPAANEPDPHPPPTVPP 2648

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  456 APTTTKEPAP--------TTTKSAPTTPKEPA-----PTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTT 522
Cdd:PHA03247  2649 PERPRDDPAPgrvsrprrARRLGRAAQASSPPqrprrRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAA 2728

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  523 KEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPkepaptttkkpaPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTP 602
Cdd:PHA03247  2729 RQASPALPAAPAPPAVPAGPATPGGPARPARP------------PTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRE 2796

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  603 EEPAPTTPEEPAPTTPeepapttleeptpttpeepapttPKTAAPNTPKEPAPTtpkEPAPTTPKETAPTTPKGTAPTTL 682
Cdd:PHA03247  2797 SLPSPWDPADPPAAVL-----------------------APAAALPPAASPAGP---LPPPTSAQPTAPPPPPGPPPPSL 2850

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  683 KEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKgt 762
Cdd:PHA03247  2851 PLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQ-- 2928

                          490       500       510       520       530       540       550
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  763 aPTTPKETASTTPKGTAPTTLKEPAP-TTPKKPAPKELAPTTTKKPTS-TTSDKPAPTIPKETAPTIPKEPAPTT 835
Cdd:PHA03247  2929 -PQPPPPPPPRPQPPLAPTTDPAGAGePSGAVPQPWLGALVPGRVAVPrFRVPQPAPSREAPASSTPPLTGHSLS 3002

Somatomedin_B

pfam01033

Somatomedin B domain;

69-106

3.88e-18

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 78.88 E-value: 3.88e-18

                           10        20        30
                   ....*....|....*....|....*....|....*...
gi 1331807891   69 SCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLG 39

PHA03247

large tegument protein UL36; Provisional

437-855

7.36e-18

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 90.38 E-value: 7.36e-18

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  437 PKEPAPTtPKEPAPTTTKSAPTTTKEPA-PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTtpKEPAPTTTKSAPTTPK 515
Cdd:PHA03247  2570 PPRPAPR-PSEPAVTSRARRPDAPPQSArPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS--PSPAANEPDPHPPPTV 2646

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  516 EPSPTTTKEPAPTTPKEP----APTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTtPKETAPTTPEKLTP 591
Cdd:PHA03247  2647 PPPERPRDDPAPGRVSRPrrarRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPA-PHALVSATPLPPGP 2725

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  592 TTPEELAPTTPEEPA-PTTPEEPA-----------PTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPK 659
Cdd:PHA03247  2726 AAARQASPALPAAPApPAVPAGPAtpggparparpPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA 2805

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  660 EPA----PTTPKETAPTTPKGTA--PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPT 733
Cdd:PHA03247  2806 DPPaavlAPAAALPPAASPAGPLppPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRR 2885

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  734 TPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPkgtapttLKEPAPTTPKKPAPKELAPTTTKKPTSTTSD 813
Cdd:PHA03247  2886 LARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPP-------QPQPPPPPPPRPQPPLAPTTDPAGAGEPSGA 2958

                          410       420       430       440
                   ....*....|....*....|....*....|....*....|....*..
gi 1331807891  814 KPAP----TIPKETAPTIPKEPAPTTPKK-PAPTTPETPPPTTSEVS 855
Cdd:PHA03247  2959 VPQPwlgaLVPGRVAVPRFRVPQPAPSREaPASSTPPLTGHSLSRVS 3005

Somatomedin_B

pfam01033

Somatomedin B domain;

29-67

1.93e-16

Somatomedin B domain;

Pssm-ID: 460034 Cd Length: 40 Bit Score: 74.26 E-value: 1.93e-16

                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1331807891   29 SCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCTAE 67
Cdd:pfam01033    2 SCKGRCGESFDRGRLCQCDDDCVKYGDCCPDYESLCLGE 40

PHA03247

large tegument protein UL36; Provisional

483-912

1.45e-14

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 79.60 E-value: 1.45e-14

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  483 PKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKK------------------PAPT 544
Cdd:PHA03247  2475 PGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPRmltwirgleelasddagdPPPP 2554

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  545 TPKETAPTTPKEpapTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEElAPTTPEEPAPTTPEEPAPTTPEEPAPT 624
Cdd:PHA03247  2555 LPPAAPPAAPDR---SVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVD-DRGDPRGPAPPSPLPPDTHAPDPPPPS 2630

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  625 TLEEPTPTTPEEPAPTTPKTAAPNTPKEP---------APTTPKEPAPTTPKETAPTTPKGTAPTT--LKEPAPTTPKKP 693
Cdd:PHA03247  2631 PSPAANEPDPHPPPTVPPPERPRDDPAPGrvsrprrarRLGRAAQASSPPQRPRRRAARPTVGSLTslADPPPPPPTPEP 2710

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  694 APKELAPTTTKEPTSTTSDKPAPTTPketaPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETAST 773
Cdd:PHA03247  2711 APHALVSATPLPPGPAAARQASPALP----AAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRP 2786

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  774 TPKGTAPTTLKEPAPTTPKK-PAPKELAPTTTKKPTSTTSDKPAPTIPKETAPTIPKEPAPTT----------------- 835
Cdd:PHA03247  2787 AVASLSESRESLPSPWDPADpPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSlplggsvapggdvrrrp 2866

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  836 -PKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDE----STPELSAEPTPKALENSPKEPgVPTTKTPAATKPEMTT 910
Cdd:PHA03247  2867 pSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQperpPQPQAPPPPQPQPQPPPPPQP-QPPPPPPPRPQPPLAP 2945


                   ..
gi 1331807891  911 TA 912
Cdd:PHA03247  2946 TT 2947

PHA03247

large tegument protein UL36; Provisional

191-593

1.94e-13

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 75.75 E-value: 1.94e-13

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  191 TTPDTSTTQHNKVTTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKE---- 266
Cdd:PHA03247  2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGraaq 2675

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  267 ----TQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTT 342
Cdd:PHA03247  2676 asspPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPA 2755

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  343 PKEPAPTTPKEPAPTTTKSLHPPLPRSLHPPLPRSLHPPPPRSLHPPLPRSLHPPPPSLHPPLPRSLHPPPQEPAPTPPp 422
Cdd:PHA03247  2756 RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA- 2834

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  423 ptspttpKKPAPTTPKEPAPTTpkEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 502
Cdd:PHA03247  2835 -------QPTAPPPPPGPPPPS--LPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQP 2905

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  503 APTTTKSAPTTPKEPsPTTTKEPAPTTPKEPAPTTPKKPAPTT-------PKETAPTTPKEPAPTTTKKPAPTTPKEPAP 575
Cdd:PHA03247  2906 ERPPQPQAPPPPQPQ-PQPPPPPQPQPPPPPPPRPQPPLAPTTdpagagePSGAVPQPWLGALVPGRVAVPRFRVPQPAP 2984

                          410
                   ....*....|....*...
gi 1331807891  576 TTPKETAPTTPEKLTPTT 593
Cdd:PHA03247  2985 SREAPASSTPPLTGHSLS 3002

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1193-1237

9.62e-11

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 58.02 E-value: 9.62e-11

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1331807891  1193 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPIFKGFGGL 1237
Cdd:smart00120    1 IDAAFELRD--GKTYFFKGDKYWRFDPKRVDPGYPKLISSFFPGL 43

PRK07994

DNA polymerase III subunits gamma and tau; Validated

465-619

8.67e-10

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 63.35 E-value: 8.67e-10

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  465 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPA----PTTPKEPAPTTPKK 540
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLlaarQQLQRAQGATKAKK 440

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  541 PAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTP---KETAPTTPEKLTPTTPEELAPTTPEEPaptTPEEPAPTT 617
Cdd:PRK07994   441 SEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAyrwKATNPVEVKKEPVATPKALKKALEHEK---TPELAAKLA 517


                   ..
gi 1331807891  618 PE 619
Cdd:PRK07994   518 AE 519

Hemopexin

pfam00045

Hemopexin; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1193-1235

1.06e-08

Pssm-ID: 395000 [Multi-domain] Cd Length: 44 Bit Score: 52.18 E-value: 1.06e-08

                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*
gi 1331807891 1193 IDTVFTRCNceGKTFFFKDSQYWRFTNDIKDAGYPKPI--FKGFG 1235
Cdd:pfam00045    1 IDAAFEDRD--GKTYFFKGRKYWRFDPQRVEPGYPKLIsdFPGLP 43

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

464-556

1.15e-08

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 59.44 E-value: 1.15e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  464 APTTTKSAPTTPKEPAPTAPkKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTttkEPAPTTPKEPAPTTPKK--P 541
Cdd:PRK14950   362 PVPAPQPAKPTAAAPSPVRP-TPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPV---APPVPHTPESAPKLTRAaiP 437

                           90
                   ....*....|....*
gi 1331807891  542 APTTPKETAPTTPKE 556
Cdd:PRK14950   438 VDEKPKYTPPAPPKE 452

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

465-549

1.30e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 59.90 E-value: 1.30e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  465 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTttksAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 544
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAA----APAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113


                   ....*
gi 1331807891  545 TPKET 549
Cdd:PRK12270   114 EDEVT 118

PRK07764

DNA polymerase III subunits gamma and tau; Validated

435-621

5.18e-08

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 57.69 E-value: 5.18e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  435 TTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT---TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPtTTKSAP 511
Cdd:PRK07764   590 PAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPApagAAAAPAEASAAPAPGVAAPEHHPKHVAVPDA-SDGGDG 668

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  512 TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTP 591
Cdd:PRK07764   669 WPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDP 748

                          170       180       190
                   ....*....|....*....|....*....|....
gi 1331807891  592 T----TPEELAPTTPEEPAPTTPEEPAPTTPEEP 621
Cdd:PRK07764   749 PdpagAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

463-542

6.15e-08

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 57.59 E-value: 6.15e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 542
Cdd:PRK12270    45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAA 124

rne

PRK10811

ribonuclease E; Reviewed

480-662

6.34e-08

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 57.36 E-value: 6.34e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  480 PTAPKKPAPTTPKEPAPTTPKEPA-PTTTKSAPTTPKEPSPTTtkEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPA 558
Cdd:PRK10811   846 PVVRPQDVQVEEQREAEEVQVQPVvAEVPVAAAVEPVVSAPVV--EAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAP 923

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  559 PTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPA-PTTPEEPAPTTPEEPAPTTLEEPTPTTPEEP 637
Cdd:PRK10811   924 VTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAePEVVAQPAAPVVAEVAAEVETVTAVEPEVAP 1003

                          170       180       190
                   ....*....|....*....|....*....|.
gi 1331807891  638 APTTPKTA------APNTpKEPAPTTPKEPA 662
Cdd:PRK10811  1004 AQVPEATVehnhatAPMT-RAPAPEYVPEAP 1033

PRK12323

DNA polymerase III subunit gamma/tau;

462-674

7.86e-08

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 56.81 E-value: 7.86e-08

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PRK12323   371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAP 450

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  542 APTTPKETAPTtpkepaptttKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAP--TTPEEPAPTTPEEPAPTTPE 619
Cdd:PRK12323   451 APAPAAAPAAA----------ARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPweELPPEFASPAPAQPDAAPAG 520

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  620 EPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKePAPTTPKETAPTTP 674
Cdd:PRK12323   521 WVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPV-VAPRPPRASASGLP 574

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

434-675

1.12e-07

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 56.62 E-value: 1.12e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  434 PTTPKEPA-PTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEP-APTAPKKPAPttPKEP-APTTPKEPAPTTTKSA 510
Cdd:PTZ00449   582 PKDPKHPKdPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPeSPKSPKRPPP--PQRPsSPERPEGPKIIKSPKP 659

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  511 PTTPKEPSPTTTKEPAPTTPKEPAPTTpkkpapttpKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEklT 590
Cdd:PTZ00449   660 PKSPKPPFDPKFKEKFYDDYLDAAAKS---------KETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKLPR--D 728

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  591 PTTPEElAPTTPEEPAPTTPEEPAPttPEEPAPTTLEEPTPTTPEEPAPTTPKT----AAPNTPKEPA--PTTPKEPAPT 664
Cdd:PTZ00449   729 EEFPFE-PIGDPDAEQPDDIEFFTP--PEEERTFFHETPADTPLPDILAEEFKEedihAETGEPDEAMkrPDSPSEHEDK 805

                          250
                   ....*....|.
gi 1331807891  665 TPKeTAPTTPK 675
Cdd:PTZ00449   806 PPG-DHPSLPK 815

PRK07994

DNA polymerase III subunits gamma and tau; Validated

491-663

1.79e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 55.64 E-value: 1.79e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  491 PKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTP 570
Cdd:PRK07994   361 PAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKK 440

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  571 KEPAPTTPKETAPTTPEKLTPTTPEelAPTTPEEPAPTTPEEPAPTTPEEpapttleeptpttpeepapttPKTAAPNTP 650
Cdd:PRK07994   441 SEPAAASRARPVNSALERLASVRPA--PSALEKAPAKKEAYRWKATNPVE---------------------VKKEPVATP 497

                          170
                   ....*....|...
gi 1331807891  651 KEPAPTTPKEPAP 663
Cdd:PRK07994   498 KALKKALEHEKTP 510

PRK12323

DNA polymerase III subunit gamma/tau;

440-650

1.86e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 55.65 E-value: 1.86e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  440 PAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkepAPTTTKSAPTTPKEPSP 519
Cdd:PRK12323   374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL---AAARQASARGPGGAPAP 450

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  520 TTTkePAPTtpkePAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAP 599
Cdd:PRK12323   451 APA--PAAA----PAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAE 524

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  600 TTPeEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTP 650
Cdd:PRK12323   525 SIP-DPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

463-548

2.20e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 55.20 E-value: 2.20e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPK----EPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTksaPTTPKEPSPTTTKEPAPTTPKE--PAPT 536
Cdd:PRK14950   364 PAPQPAKPTAAAPSpvrpTPAPSTRPKAAAAANIPPKEPVRETATPPPV---PPRPVAPPVPHTPESAPKLTRAaiPVDE 440

                           90
                   ....*....|..
gi 1331807891  537 TPKKPAPTTPKE 548
Cdd:PRK14950   441 KPKYTPPAPPKE 452

PRK12323

DNA polymerase III subunit gamma/tau;

502-694

3.04e-07

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.88 E-value: 3.04e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  502 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 581
Cdd:PRK12323   374 PATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA 453

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  582 APTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEP 661
Cdd:PRK12323   454 PAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATAD 533

                          170       180       190
                   ....*....|....*....|....*....|...
gi 1331807891  662 APTTPKETAPTTPKGTAPTTLKEPAPTTPKKPA 694
Cdd:PRK12323   534 PDDAFETLAPAPAAAPAPRAAAATEPVVAPRPP 566

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

474-554

3.06e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 55.28 E-value: 3.06e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  474 TPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTT 553
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118


                   .
gi 1331807891  554 P 554
Cdd:PRK12270   119 P 119

rne

PRK10811

ribonuclease E; Reviewed

509-694

3.53e-07

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 55.05 E-value: 3.53e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  509 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPkepaPTTTKKPAPTTPKEPAPTTPKETAPTTPEK 588
Cdd:PRK10811   844 RYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVE----AVAEVVEEPVVVAEPQPEEVVVVETTHPEV 919

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  589 LTPTTPEELAPTTPEEP--APTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTP 666
Cdd:PRK10811   920 IAAPVTEQPQVITESDVavAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEP 999

                          170       180       190
                   ....*....|....*....|....*....|....*
gi 1331807891  667 KETAPTTPKG-------TAPTTlKEPAPTTPKKPA 694
Cdd:PRK10811  1000 EVAPAQVPEAtvehnhaTAPMT-RAPAPEYVPEAP 1033

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

478-556

4.02e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.90 E-value: 4.02e-07

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1331807891  478 PAPTAPKKPAPTTPKEPAPTTPkePAPTTTKSAPTTPKEPSPtttkePAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 556
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPA--AAPAAKAPAAPAPAPPAA-----AAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPA 109

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

433-514

5.35e-07

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 54.51 E-value: 5.35e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT 512
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ..
gi 1331807891  513 TP 514
Cdd:PRK12270   118 TP 119

PRK07764

DNA polymerase III subunits gamma and tau; Validated

433-622

5.77e-07

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 54.22 E-value: 5.77e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPkePAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT 512
Cdd:PRK07764   614 RPAAP--AAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPA 691

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  513 TPKEPSPtttKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPT 592
Cdd:PRK07764   692 APAGAAP---AQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAA 768

                          170       180       190
                   ....*....|....*....|....*....|
gi 1331807891  593 TPEELAPTTPEEPAPTTPEEPAPTTPEEPA 622
Cdd:PRK07764   769 APAAAPPPSPPSEEEEMAEDDAPSMDDEDR 798

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

437-719

6.81e-07

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 53.93 E-value: 6.81e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  437 PKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTpKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKE 516
Cdd:PTZ00449   521 PKAPGDKEGEEGEHEDSKESDEPKEGGKPGETKEGEVG-KKPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKR 599

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  517 PSpTTTKEPAPTTPKEPA----PTTPKKP-APTTPKE----TAPTTPKEPAPTTTKKPAPTTPKEPAPTTPK-------- 579
Cdd:PTZ00449   600 PR-SAQRPTRPKSPKLPElldiPKSPKRPeSPKSPKRppppQRPSSPERPEGPKIIKSPKPPKSPKPPFDPKfkekfydd 678

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  580 --ETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTtleeptpttpeepapttpktaaPNTPKEPApTT 657
Cdd:PTZ00449   679 ylDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL----------------------PRDEEFPF-EP 735

                          250       260       270       280       290       300
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1331807891  658 PKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA--PTTP 719
Cdd:PTZ00449   736 IGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMkrPDSP 799

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

479-611

9.37e-07

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 53.56 E-value: 9.37e-07

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  479 APTAPKKPAPTTPKEPAPTTPkEPAPTTTKSAPTTPKEPSPTTTKEPApttpkepAPTTPKKPAPTTPKETAPTTPKEPA 558
Cdd:PRK14951   369 AAEAAAPAEKKTPARPEAAAP-AAAPVAQAAAAPAPAAAPAAAASAPA-------APPAAAPPAPVAAPAAAAPAAAPAA 440

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1331807891  559 PTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPE 611
Cdd:PRK14951   441 APAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

469-548

1.08e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 53.36 E-value: 1.08e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  469 KSAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 548
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPA--AAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVE 114

PRK07003

DNA polymerase III subunit gamma/tau;

437-694

1.26e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 53.31 E-value: 1.26e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  437 PKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKS---APTT 513
Cdd:PRK07003   381 PAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKAnarASAD 460

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  514 PKEPSPTTTKEPAPTTPKEPAPTTPkkpaPTTPKETAPttpkepaptttkkpapttpkePAPTTPKETAPTTPEKLTPT- 592
Cdd:PRK07003   461 SRCDERDAQPPADSGSASAPASDAP----PDAAFEPAP---------------------RAAAPSAATPAAVPDARAPAa 515

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  593 TPEELAPTTPEEPAP-TTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAP 671
Cdd:PRK07003   516 ASREDAPAAAAPPAPeARPPTPAAAAPAARAGGAAAALDVLRNAGMRVSSDRGARAAAAAKPAAAPAAAPKPAAPRVAVQ 595

                          250       260
                   ....*....|....*....|....
gi 1331807891  672 T-TPKGTAPTTLKEPAPTTPKKPA 694
Cdd:PRK07003   596 VpTPRARAATGDAPPNGAARAEQA 619

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

462-596

1.27e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 52.79 E-value: 1.27e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTPKEPAPTApkKPAPTTPKEPAPTtpkePAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PRK14951   371 EAAAPAEKKTPARPEAAAPAA--APVAQAAAAPAPA----AAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAA 444

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  542 APTTPKETAPTTPKepapttTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEE 596
Cdd:PRK14951   445 VALAPAPPAQAAPE------TVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

PRK14948

DNA polymerase III subunit gamma/tau;

478-556

1.37e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 52.66 E-value: 1.37e-06

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1331807891  478 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 556
Cdd:PRK14948   516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

440-526

1.53e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.97 E-value: 1.53e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  440 PAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSP 519
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ....*..
gi 1331807891  520 TTTKEPA 526
Cdd:PRK12270   118 TPLRGAA 124

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

471-586

1.60e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 52.50 E-value: 1.60e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  471 APTTPKEPAPTAPKKPAPTTPKePAPTTPkepaPTTTKSAPTTPKEPSPtttkEPAPTTPKEPAPTTPKKPaptTPKETA 550
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTR----PKAAAAANIPPKEPVR----ETATPPPVPPRPVAPPVP---HTPESA 428

                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 1331807891  551 PTTPKEPAptttkkpapttpkePAPTTPKETAPTTP 586
Cdd:PRK14950   429 PKLTRAAI--------------PVDEKPKYTPPAPP 450

PRK14948

DNA polymerase III subunit gamma/tau;

463-541

1.62e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 52.66 E-value: 1.62e-06

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PRK14948   516 SASNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSP 594

PRK07764

DNA polymerase III subunits gamma and tau; Validated

462-671

1.67e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 52.68 E-value: 1.67e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTPKEPAPtapKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PRK07764   587 VVGPAPGAAGGEGPPAPAS---SGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  542 APTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEP 621
Cdd:PRK07764   664 DGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPP 743

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|
gi 1331807891  622 APTTLEEPTPTTPEEPAPTTPKTAAPNTPkEPAPTTPKEPAPTTPKETAP 671
Cdd:PRK07764   744 EPDDPPDPAGAPAQPPPPPAPAPAAAPAA-APPPSPPSEEEEMAEDDAPS 792

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

448-534

2.14e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.59 E-value: 2.14e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  448 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAP 527
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117


                   ....*..
gi 1331807891  528 TTPKEPA 534
Cdd:PRK12270   118 TPLRGAA 124

PRK08691

DNA polymerase III subunits gamma and tau; Validated

473-655

2.49e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 52.02 E-value: 2.49e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  473 TTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSA---PTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKET 549
Cdd:PRK08691   375 TELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAaamPSEGKTAGPVSNQENNDVPPWEDAPDEAQTAAGTAQTSA 454

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  550 A-------PTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTP--EKLTPTTPEELAPTTPEE----PAPTTPEEPAPT 616
Cdd:PRK08691   455 KsiqtaseAETPPENQVSKNKAADNETDAPLSEVPSENPIQATPndEAVETETFAHEAPAEPFYgygfPDNDCPPEDGAE 534

                          170       180       190
                   ....*....|....*....|....*....|....*....
gi 1331807891  617 TPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAP 655
Cdd:PRK08691   535 IPPPDWEHAAPADTAGGGADEEAEAGGIGGNNTPSAPPP 573

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

494-587

2.58e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 52.20 E-value: 2.58e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  494 PAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKepaptttkkpapttpkEP 573
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPP----------------AA 102

                           90
                   ....*....|....
gi 1331807891  574 APTTPKETAPTTPE 587
Cdd:PRK12270   103 AAAAAPAAAAVEDE 116

PRK07764

DNA polymerase III subunits gamma and tau; Validated

443-554

3.37e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.91 E-value: 3.37e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  443 TTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTT 522
Cdd:PRK07764   392 GAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPA 471

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1331807891  523 KEPAPTTPKEPAPTTPKKPAPTTPKETAPTTP 554
Cdd:PRK07764   472 AAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAP 503

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

433-556

4.00e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 4.00e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPKEPAPTTPKEPAptttksaptttKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPttpkEPAPTTTKSAPT 512
Cdd:PRK14951   386 AAAPAAAPVAQAAAAPA-----------PAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAP----AAAPAAVALAPA 450

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....
gi 1331807891  513 TPKEPSPTTTKEPAPTTPkEPAPTTPKKPAPTTPKETAPTTPKE 556
Cdd:PRK14951   451 PPAQAAPETVAIPVRVAP-EPAVASAAPAPAAAPAAARLTPTEE 493

PRK07764

DNA polymerase III subunits gamma and tau; Validated

481-687

4.24e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 51.53 E-value: 4.24e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  481 TAPKKPAPTTPKEPAPTTPKEPAPtttKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPT 560
Cdd:PRK07764   590 PAPGAAGGEGPPAPASSGPPEEAA---RPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  561 TTKKPAPTTPKEPAPTTPkeTAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPT 640
Cdd:PRK07764   667 DGWPAKAGGAAPAAPPPA--PAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPE 744

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1331807891  641 TPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP 687
Cdd:PRK07764   745 PDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAP 791

PRK12323

DNA polymerase III subunit gamma/tau;

433-602

5.01e-06

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 51.03 E-value: 5.01e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEPAPTTTKSAPT 512
Cdd:PRK12323   413 AAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAAR--PAAAGPRPVAAAAAAAPARAAPAAAPA 490

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  513 TPKEPSPtttkePAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPeKLTPT 592
Cdd:PRK12323   491 PADDDPP-----PWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEP-VVAPR 564

                          170
                   ....*....|
gi 1331807891  593 TPEELAPTTP 602
Cdd:PRK12323   565 PPRASASGLP 574

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

494-620

7.72e-06

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 50.19 E-value: 7.72e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  494 PAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKePAPTTPKKPAPTTPKETAPttpkepaptttkkpapttpKEP 573
Cdd:PRK14950   345 SYGQLPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKE-------------------PVR 404

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1331807891  574 APTTPKETAPTTPEKLTPTTPEELAPTTPEE-PAPTTPEEPAPTTPEE 620
Cdd:PRK14950   405 ETATPPPVPPRPVAPPVPHTPESAPKLTRAAiPVDEKPKYTPPAPPKE 452

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

472-679

8.06e-06

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 50.15 E-value: 8.06e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  472 PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEtaP 551
Cdd:NF033839   281 QDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKPEPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVKPQ--P 358

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  552 TTPKepAPTTTKKPAPTTPKEPAPTTPKETAPTTPE------KLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTT 625
Cdd:NF033839   359 EKPK--PEVKPQPEKPKPEVKPQPETPKPEVKPQPEkpkpevKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPE 436

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1331807891  626 LEEPTPTTPEEPAPTTPKtAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 679
Cdd:NF033839   437 KPKPEVKPQPEKPKPEVK-PQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKP 489

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

573-683

8.07e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 50.66 E-value: 8.07e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  573 PAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPApttleeptpttpeepapttPKTAAPNTPKE 652
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPA-------------------AAAAAAAAPAA 98

                           90       100       110
                   ....*....|....*....|....*....|.
gi 1331807891  653 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLK 683
Cdd:PRK12270    99 PPAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129

PRK07764

DNA polymerase III subunits gamma and tau; Validated

489-695

8.09e-06

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 50.37 E-value: 8.09e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  489 TTPKEPAPTTPKEPAPTTTKSAPTTPKEPsptttkePAPTTPKEPAPTtpkkPAPTTPKETAPTTPKEPAPTTTKKPAPT 568
Cdd:PRK07764   590 PAPGAAGGEGPPAPASSGPPEEAARPAAP-------AAPAAPAAPAPA----GAAAAPAEASAAPAPGVAAPEHHPKHVA 658

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  569 TPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPN 648
Cdd:PRK07764   659 VPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDP 738

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*..
gi 1331807891  649 TPKEPAPTTPKEPAPTTPKETAPTTPkGTAPTTLKEPAPTTPKKPAP 695
Cdd:PRK07764   739 VPLPPEPDDPPDPAGAPAQPPPPPAP-APAAAPAAAPPPSPPSEEEE 784

DamX

COG3266

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...

463-554

8.59e-06

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442497 [Multi-domain] Cd Length: 455 Bit Score: 49.85 E-value: 8.59e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPA-PTTPKEPAPTTTKSAPTTPKEPSPTTTKepapttPKEPAPTTPKKP 541
Cdd:COG3266    265 SAPATTSLGEQQEVSLPPAVAAQPAAAAAAQPSaVALPAAPAAAAAAAAPAEAAAPQPTAAK------PVVTETAAPAAP 338

                           90
                   ....*....|....
gi 1331807891  542 APTTPKET-APTTP 554
Cdd:COG3266    339 APEAAAAAaAPAAP 352

PRK10263

DNA translocase FtsK; Provisional

463-679

9.93e-06

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 50.47 E-value: 9.93e-06

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPK---KPAPTtPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK 539
Cdd:PRK10263   336 PVEPVTQTPPVASVDVPPAQPTvawQPVPG-PQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQ 414

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  540 KPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPttPEEPAPTTPE 619
Cdd:PRK10263   415 PAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQ--PVEQQPVVEP 492

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  620 EPAPTTLEEPTPT------TPEEPAPTTPKTAA-----PNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 679
Cdd:PRK10263   493 EPVVEETKPARPPlyyfeeVEEKRAREREQLAAwyqpiPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSP 563

PRK10856

cytoskeleton protein RodZ;

462-554

1.55e-05

cytoskeleton protein RodZ;

Pssm-ID: 236776 [Multi-domain] Cd Length: 331 Bit Score: 48.87 E-value: 1.55e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTtpkEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PRK10856   160 QSVPLDTSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVV---APSQANVDTAATPAPAAPATPDGAAP 236

                           90
                   ....*....|...
gi 1331807891  542 APTTPkeTAPTTP 554
Cdd:PRK10856   237 LPTDQ--AGVSTP 247

PRK14948

DNA polymerase III subunit gamma/tau;

462-621

1.74e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 49.19 E-value: 1.74e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT---- 537
Cdd:PRK14948   364 FISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnlee 443

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  538 --------------------------------------------------------------------PKKPAPTTPKET 549
Cdd:PRK14948   444 lwqqilaklelpstrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAKT 523

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1331807891  550 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPeEPAPTTPEEPAPTTPEEP 621
Cdd:PRK14948   524 PPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSP-PPPIPEEPTPSPTKDSSP 594

PRK10905

cell division protein DamX; Validated

435-542

1.83e-05

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 48.40 E-value: 1.83e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  435 TTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTT---TKSAPTTPKEP--APTAPKKPAPTTPKEPAPTTPKEPAPTTtks 509
Cdd:PRK10905   122 TLPTEPATVAPVRNGNASRQTAKTQTAERPATTrpaRKQAVIEPKKPqaTAKTEPKPVAQTPKRTEPAAPVASTKAP--- 198

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1331807891  510 APTTPKEPSPTTTKEPAPTTpkEPAPTTPKKPA 542
Cdd:PRK10905   199 AATSTPAPKETATTAPVQTA--SPAQTTATPAA 229

PHA03247

large tegument protein UL36; Provisional

463-689

2.12e-05

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 2.12e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKKPAPTtPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE---------- 532
Cdd:PHA03247   257 PPPVVGEGADRAPETARGATGPPPPPE-AAAPNGAAAPPDGVWGAALAGAPLALPAPPDPPPPAPAGDAEeeddedgame 335

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  533 ---PAPTTPKKPAPTTPKETAPT-TPKEPAPTTTKKPAPTTPKEPAPTT----PKETAPTTPEKLTPTTPEELAPTTPEE 604
Cdd:PHA03247   336 vvsPLPRPRQHYPLGFPKRRRPTwTPPSSLEDLSAGRHHPKRASLPTRKrrsaRHAATPFARGPGGDDQTRPAAPVPASV 415

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  605 PAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKE 684
Cdd:PHA03247   416 PTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDPDDATRKALDALRERRPPEPPGADLAELLG 495


                   ....*
gi 1331807891  685 PAPTT 689
Cdd:PHA03247   496 RHPDT 500

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

466-535

2.62e-05

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 48.35 E-value: 2.62e-05

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  466 TTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 535
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGS 144

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

475-695

2.85e-05

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 48.38 E-value: 2.85e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  475 PKEPAPTAPKKPAPTTPKEPAPTTPKE----PAPTTTKSAPTTP----KEPSPTTTKEPAPTTPKEPAPTT------PKK 540
Cdd:PLN03209   330 PKESDAADGPKPVPTKPVTPEAPSPPIeeepPQPKAVVPRPLSPytayEDLKPPTSPIPTPPSSSPASSKSvdavakPAE 409

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  541 PAPTTPKETAPTTP-KEPAPTTTKKPAPTTpkePAPTTPKETAPTTPeklTPTTPEELAPTTPEEPA-PTTPEEPAPTTP 618
Cdd:PLN03209   410 PDVVPSPGSASNVPeVEPAQVEAKKTRPLS---PYARYEDLKPPTSP---SPTAPTGVSPSVSSTSSvPAVPDTAPATAA 483

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1331807891  619 EEPAPTTLEEPTPTTPEEPAPTTPktaaPNTPKEPAPTTPKEPAPTTPKetAPTTPKGTAPTTLKEPAPTTPKKPAP 695
Cdd:PLN03209   484 TDAAAPPPANMRPLSPYAVYDDLK----PPTSPSPAAPVGKVAPSSTNE--VVKVGNSAPPTALADEQHHAQPKPRP 554

PHA03307

transcriptional regulator ICP4; Provisional

423-786

3.12e-05

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 48.63 E-value: 3.12e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  423 PTSPTTPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEP 502
Cdd:PHA03307    73 PGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASP 152

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  503 APTTTKSAPTTPKEPSPTTTKEPAPTTPK-EPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 581
Cdd:PHA03307   153 PAAGASPAAVASDAASSRQAALPLSSPEEtARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDA 232

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  582 APTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPttPKEP 661
Cdd:PHA03307   233 GASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSG--PAPS 310

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  662 APTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPT 741
Cdd:PHA03307   311 SPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRRRA 390

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*
gi 1331807891  742 TPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEP 786
Cdd:PHA03307   391 RAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYARYPLLTP 435

PRK07994

DNA polymerase III subunits gamma and tau; Validated

430-551

3.22e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 48.32 E-value: 3.22e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  430 KKPAPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPtTPKEPAPTTPKEPAPTTTKS 509
Cdd:PRK07994   393 PPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSEPAAASRARP-VNSALERLASVRPAPSALEK 471

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|..
gi 1331807891  510 APtTPKEPSPTTTKEPAPTtpKEPAPTTPKKPAPTTPKETAP 551
Cdd:PRK07994   472 AP-AKKEAYRWKATNPVEV--KKEPVATPKALKKALEHEKTP 510

PRK10263

DNA translocase FtsK; Provisional

437-699

3.64e-05

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 48.54 E-value: 3.64e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  437 PKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAP---------------KKPAPTTPKEPAPTTPKE 501
Cdd:PRK10263   336 PVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQqsqyaqpavqyneplQQPVQPQQPYYAPAAEQP 415

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  502 PAPTTTKSAPTTPKE-----PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPT 576
Cdd:PRK10263   416 AQQPYYAPAPEQPAQqpyyaPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV 495

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  577 TpKETAPTTP--------EKLTPTTPEELA------PTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTP 642
Cdd:PRK10263   496 V-EETKPARPplyyfeevEEKRAREREQLAawyqpiPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLA 574

                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1331807891  643 KTAAPnTPKEPAPTTPKEPAPTtpketaPTTPKGTAPttlKEPAPTTPKKPAPKELA 699
Cdd:PRK10263   575 TGAAA-TVAAPVFSLANSGGPR------PQVKEGIGP---QLPRPKRIRVPTRRELA 621

PRK12323

DNA polymerase III subunit gamma/tau;

578-791

4.62e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.95 E-value: 4.62e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  578 PKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTT 657
Cdd:PRK12323   375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  658 PKEPAPTTPKETAPTTPkgtapttlkePAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPttPKETAPTTPEETAPTTPEE 737
Cdd:PRK12323   455 AAAPAAAARPAAAGPRP----------VAAAAAAAPARAAPAAAPAPADDDPPPWEELP--PEFASPAPAQPDAAPAGWV 522

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1331807891  738 TAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETAstTPKGTAPTTLKEPAPTTP 791
Cdd:PRK12323   523 AESIPDPATADPDDAFETLAPAPAAAPAPRAAAA--TEPVVAPRPPRASASGLP 574

PHA03378

EBNA-3B; Provisional

319-699

4.71e-05

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 48.14 E-value: 4.71e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  319 TPKEPTATTIKSAPTTPKEPAPTTP-KEPAPTTPKEPAPTTTKSlhpplPRSLHPPlprslhpppprslhppLPRSLHPP 397
Cdd:PHA03378   444 TPHSQAPTVVLHRPPTQPLEGPTGPlSVQAPLEPWQPLPHPQVT-----PVILHQP----------------PAQGVQAH 502

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  398 PPSLHPPLPRSLHPPPQEPAPTPPPPTSPTTPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTTKePAPTTTKSAPTTPKE 477
Cdd:PHA03378   503 GSMLDLLEKDDEDMEQRVMATLLPPSPPQPRAGRRAPCVYTEDLDIESDEPASTEPVHDQLLPA-PGLGPLQIQPLTSPT 581

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  478 PAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKS-APTTPKEPSPTTTKEPAPTTPKEPAPTT---PKKPAPTTPKETAPTT 553
Cdd:PHA03378   582 TSQLASSAPSYAQTPWPVPHPSQTPEPPTTQShIPETSAPRQWPMPLRPIPMRPLRMQPITfnvLVFPTPHQPPQVEITP 661

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  554 PKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT----PEKLTPTTPEELAPTTPEEP-APTTPEEPAPTTPEEPAPTTLEE 628
Cdd:PHA03378   662 YKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTmqppPRAPTPMRPPAAPPGRAQRPaAATGRARPPAAAPGRARPPAAAP 741

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  629 PTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTT---PKGtAPTTLKEP-APTTPKKPAPKELA 699
Cdd:PHA03378   742 GRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPqqrPRG-APTPQPPPqAGPTSMQLMPRAAP 815

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

433-517

5.19e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.50 E-value: 5.19e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPKEPAPTtPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT 512
Cdd:PRK14950   367 QPAKPTAAAPS-PVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYT 445


                   ....*
gi 1331807891  513 TPKEP 517
Cdd:PRK14950   446 PPAPP 450

PspC_subgroup_2

NF033839

pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ...

434-673

5.43e-05

Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 47.46 E-value: 5.43e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  434 PTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPtttksAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTT 513
Cdd:NF033839   281 QDTPKEPGNKKPSAPKPGMQPSPQPEKKEVKP-----EPETPKPEVKPQLEKPKPEVKPQPEKPKPEVKPQLETPKPEVK 355

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  514 PKEPSPTTTKEPAPTTPK---EPAPTTPK---KPAPTTPK-ETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTP 586
Cdd:NF033839   356 PQPEKPKPEVKPQPEKPKpevKPQPETPKpevKPQPEKPKpEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQP 435

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  587 E------KLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPA-PTTPK 659
Cdd:NF033839   436 EkpkpevKPQPEKPKPEVKPQPETPKPEVKPQPEKPKPEVKPQPEKPKPDNSKPQADDKKPSTPNNLSKDKQPSnQASTN 515

                          250
                   ....*....|....
gi 1331807891  660 EPAPTTPKETAPTT 673
Cdd:NF033839   516 EKATNKPKKSLPST 529

PRK07764

DNA polymerase III subunits gamma and tau; Validated

463-788

5.46e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 47.67 E-value: 5.46e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSptttKEPAPTTPKEPAPTTPKKPA 542
Cdd:PRK07764   396 AAAPSAAAAAPAAAPAPAAAA--PAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAP----AGGAPSPPPAAAPSAQPAPA 469

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  543 PTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEK---------------------------------- 588
Cdd:PRK07764   470 PAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERwpeilaavpkrsrktwaillpeatvlgvrgdtlv 549

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  589 LTPTTP--------------------EEL-----------------APTTPEEPAPTTPEEP-----APTTPEEPAPTTL 626
Cdd:PRK07764   550 LGFSTGglarrfaspgnaevlvtalaEELggdwqveavvgpapgaaGGEGPPAPASSGPPEEaarpaAPAAPAAPAAPAP 629

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  627 EEPTPTTPEEPAPTTPKTAAP-NTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTlKEPAPTTPKKPAPKELAPTTTKE 705
Cdd:PRK07764   630 AGAAAAPAEASAAPAPGVAAPeHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAP-APAAPAAPAGAAPAQPAPAPAAT 708

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  706 PTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKE 785
Cdd:PRK07764   709 PPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAED 788


                   ...
gi 1331807891  786 PAP 788
Cdd:PRK07764   789 DAP 791

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

502-581

5.88e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.96 E-value: 5.88e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  502 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKET 581
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118

smart00120

Hemopexin-like repeats; Hemopexin is a heme-binding protein that transports heme to the liver. ...

1149-1191

5.96e-05

Pssm-ID: 214524 [Multi-domain] Cd Length: 45 Bit Score: 41.84 E-value: 5.96e-05

                            10        20        30        40
                    ....*....|....*....|....*....|....*....|....*
gi 1331807891  1149 VDGLTTLRNGTLVAFRGHYFWMLSPFSP-PSPARRITEVW-GIPS 1191
Cdd:smart00120    1 IDAAFELRDGKTYFFKGDKYWRFDPKRVdPGYPKLISSFFpGLPC 45

COG5373

Uncharacterized membrane protein [Function unknown];

470-537

6.25e-05

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 47.69 E-value: 6.25e-05

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1331807891  470 SAPTTPKEPAPtapkkPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT 537
Cdd:COG5373     42 EAASAPAEPEP-----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

rne

PRK10811

ribonuclease E; Reviewed

434-622

6.26e-05

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 47.73 E-value: 6.26e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  434 PTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTT 513
Cdd:PRK10811   846 PVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVT 925

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  514 PKEPSPTTTKEP-APTTPKEPAPTTPKKPAPTTPKETAPTTPkepaPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPT 592
Cdd:PRK10811   926 EQPQVITESDVAvAQEVAEHAEPVVEPQDETADIEEAAETAE----VVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEV 1001

                          170       180       190
                   ....*....|....*....|....*....|..
gi 1331807891  593 TPEELAPTTPEEPAPTTP--EEPAPTTPEEPA 622
Cdd:PRK10811  1002 APAQVPEATVEHNHATAPmtRAPAPEYVPEAP 1033

Streccoc_I_II

NF033804

antigen I/II family LPXTG-anchored adhesin; Members of the antigen I/II family are adhesins ...

749-903

6.82e-05

Pssm-ID: 468188 [Multi-domain] Cd Length: 1552 Bit Score: 47.63 E-value: 6.82e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  749 TTPKGTAPTTPkgTAPTTPKETAST--TPKGTAPTTLKEPAP--TTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETA 824
Cdd:NF033804   828 TKEKPTPPVAP--TAPQAPTYEVEKplEPAPVAPTYENEPTPpvKTPDQPEPSKPEEPTYETEKPLEPAPVAPTYENEPT 905

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  825 PTI--PKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPttiHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPA 902
Cdd:NF033804   906 PPVktPDQPEPSKPEEPTYETEKPLEPAPVAPSYENEPTPP---VKTPDQPEPSKPVEPTYDPLPTPPVAPTPKQLPTPP 982


                   .
gi 1331807891  903 A 903
Cdd:NF033804   983 A 983

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

540-620

7.20e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.58 E-value: 7.20e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  540 KPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPE 619
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116


                   .
gi 1331807891  620 E 620
Cdd:PRK12270   117 V 117

PRK08691

DNA polymerase III subunits gamma and tau; Validated

434-620

7.29e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236333 [Multi-domain] Cd Length: 709 Bit Score: 47.40 E-value: 7.29e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  434 PTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKsaPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTT 513
Cdd:PRK08691   388 ETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAG--PVSNQENNDVPPWEDAPDEAQTAAGTAQTSAKSIQTASEAET 465

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  514 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTpkEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPE-KLTPT 592
Cdd:PRK08691   466 PPENQVSKNKAADNETDAPLSEVPSENPIQATPNDEAVET--ETFAHEAPAEPFYGYGFPDNDCPPEDGAEIPPpDWEHA 543

                          170       180       190
                   ....*....|....*....|....*....|....*
gi 1331807891  593 TPEELAPTTPEEPA-------PTTPEEPAPTTPEE 620
Cdd:PRK08691   544 APADTAGGGADEEAeaggiggNNTPSAPPPEFSTE 578

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

526-622

7.36e-05

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 47.11 E-value: 7.36e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  526 APTTPKEPAPTTPKKPAPTTPKeTAPTTPkepaptttkkpAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEP 605
Cdd:PRK14950   361 VPVPAPQPAKPTAAAPSPVRPT-PAPSTR-----------PKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESA 428

                           90
                   ....*....|....*...
gi 1331807891  606 APTTPEE-PAPTTPEEPA 622
Cdd:PRK14950   429 PKLTRAAiPVDEKPKYTP 446

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

508-604

8.17e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 47.19 E-value: 8.17e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  508 KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPkepaptttkkpapttpKEPAPTTPKETAPTTPE 587
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAP----------------PKPAAAAAAAAAPAAPP 100

                           90
                   ....*....|....*..
gi 1331807891  588 KLTPTTPEELAPTTPEE 604
Cdd:PRK12270   101 AAAAAAAPAAAAVEDEV 117

PRK14971

DNA polymerase III subunit gamma/tau;

468-597

9.06e-05

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 47.08 E-value: 9.06e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  468 TKSAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPK 547
Cdd:PRK14971   368 DASGGRGPKQHIKPVFTQPAAAPQ--PSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVNPPSTAPQ 445

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1331807891  548 ETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT--PEKLTPTTPEEL 597
Cdd:PRK14971   446 AVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGniKEAPTGTQKEIF 497

PRK10263

DNA translocase FtsK; Provisional

464-687

9.30e-05

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 47.00 E-value: 9.30e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  464 APTTTKSAPTTPKEPAPTAPKKPAPTTPKEpAPTTPKEPAPTTTKSAPTTPKEPSpTTTKEPAPTTPKEPAPTTPKKPAP 543
Cdd:PRK10263   325 AATTATQSWAAPVEPVTQTPPVASVDVPPA-QPTVAWQPVPGPQTGEPVIAPAPE-GYPQQSQYAQPAVQYNEPLQQPVQ 402

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  544 TTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTtPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAP 623
Cdd:PRK10263   403 PQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYA-PAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQP 481

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  624 TTLEEPTPTTPEEPAPTTPKTAAPNTPKE------------------PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 685
Cdd:PRK10263   482 QPVEQQPVVEPEPVVEETKPARPPLYYFEeveekrarereqlaawyqPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAV 561


                   ..
gi 1331807891  686 AP 687
Cdd:PRK10263   562 SP 563

PRK07764

DNA polymerase III subunits gamma and tau; Validated

433-614

9.63e-05

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.90 E-value: 9.63e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPT-TPKEPAPTAPKKPAPTTPKEPAP--TTPKEPAPTTTKS 509
Cdd:PRK07764   606 SGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGvAAPEHHPKHVAVPDASDGGDGWPakAGGAAPAAPPPAP 685

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  510 APTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETA------------------PTTPKEPAPTTTKKPAPTTPK 571
Cdd:PRK07764   686 APAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQgasapspaaddpvplppePDDPPDPAGAPAQPPPPPAPA 765

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|...
gi 1331807891  572 EPAPTTPKETAPTTPEkltpttPEELAPTTPEEPAPTTPEEPA 614
Cdd:PRK07764   766 PAAAPAAAPPPSPPSE------EEEMAEDDAPSMDDEDRRDAE 802

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

258-556

9.91e-05

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 46.99 E-value: 9.91e-05

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  258 KEKTTSAKETQSIEKTSAKDlAPTSKVLAKPTPKPE-TTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPK 336
Cdd:PTZ00449   532 GEHEDSKESDEPKEGGKPGE-TKEGEVGKKPGPAKEhKPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK 610

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  337 EPA-------PTTPKEP-APTTPKEPaPTTTKSLHPPLPRSlhPPLPRSlhpppprslhpplPRSLHPPPPSLHPPLPRS 408
Cdd:PTZ00449   611 SPKlpelldiPKSPKRPeSPKSPKRP-PPPQRPSSPERPEG--PKIIKS-------------PKPPKSPKPPFDPKFKEK 674

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  409 LHPPPQEPAPTPPPPTSPTTPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTtkepaPTTTKSAPTTPKEPAPTAPKKPAP 488
Cdd:PTZ00449   675 FYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFTTPRPLPPKL-----PRDEEFPFEPIGDPDAEQPDDIEF 749

                          250       260       270       280       290       300       310
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  489 TTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAptTPKEPA--PTTPKKPAPTTPKeTAPTTPKE 556
Cdd:PTZ00449   750 FTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETG--EPDEAMkrPDSPSEHEDKPPG-DHPSLPKK 816

PLN03209

translocon at the inner envelope of chloroplast subunit 62; Provisional

439-621

1.05e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional

Pssm-ID: 178748 [Multi-domain] Cd Length: 576 Bit Score: 46.84 E-value: 1.05e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  439 EPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE--PAPTAPKkPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKE 516
Cdd:PLN03209   340 KPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEdlKPPTSPI-PTPPSSSPASSKSVDAVAKPAEPDVVPSPGS 418

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  517 PSPTTTKEPAPTTPKEPAPTTPK------KPaPTTPKETAPTTPkePAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLT 590
Cdd:PLN03209   419 ASNVPEVEPAQVEAKKTRPLSPYaryedlKP-PTSPSPTAPTGV--SPSVSSTSSVPAVPDTAPATAATDAAAPPPANMR 495

                          170       180       190
                   ....*....|....*....|....*....|....*
gi 1331807891  591 PTTP----EELAPTTPEEPAPTTPEEPAPTTPEEP 621
Cdd:PLN03209   496 PLSPyavyDDLKPPTSPSPAAPVGKVAPSSTNEVV 530

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

491-556

1.18e-04

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 46.21 E-value: 1.18e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1331807891  491 PKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 556
Cdd:PTZ00144   124 PPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRE 189

rne

PRK10811

ribonuclease E; Reviewed

572-717

1.36e-04

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.57 E-value: 1.36e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  572 EPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPK 651
Cdd:PRK10811   865 QVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVAVAQEVAE 944

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1331807891  652 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPT 717
Cdd:PRK10811   945 HAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEAT 1010

COG5373

Uncharacterized membrane protein [Function unknown];

482-553

1.36e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 46.53 E-value: 1.36e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1331807891  482 APKKPAPTTPKEPAPttpkEPAPTTTKSAPTTPKEPSPtTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTT 553
Cdd:COG5373     38 AEAAEAASAPAEPEP----EAAAAATAAAPEAAPAPVP-EAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

496-622

1.45e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 46.25 E-value: 1.45e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  496 PTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPK-KPAPTTPKETAPTTPKepaptttkkpaptTPKEPA 574
Cdd:PRK14951   366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAaASAPAAPPAAAPPAPV-------------AAPAAA 432

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*...
gi 1331807891  575 PTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPA 622
Cdd:PRK14951   433 APAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPA 480

PRK11633

cell division protein DedD; Provisional

465-552

1.49e-04

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 44.99 E-value: 1.49e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  465 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPT 544
Cdd:PRK11633    57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPK 136

                           90
                   ....*....|
gi 1331807891  545 TPKE--TAPT 552
Cdd:PRK11633   137 PVVEekAAPT 146

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

745-837

1.50e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 46.42 E-value: 1.50e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  745 GTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKPAPKelaptttkkptstTSDKPAPTIPKETA 824
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA-------------AAAAAAPAAPPAAA 103

                           90
                   ....*....|...
gi 1331807891  825 PTIPKEPAPTTPK 837
Cdd:PRK12270   104 AAAAPAAAAVEDE 116

PRK14948

DNA polymerase III subunit gamma/tau;

433-597

1.56e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 46.11 E-value: 1.56e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKS--- 509
Cdd:PRK14948   363 AFISEIANASAPANPTPAPNPSPPPAPIQPSAPKTKQAATTPSPPPAKASPPIPVPAEPTEPSPTPPANAANAPPSLnle 442

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  510 -----------APTT------------------------------------------------------PKEPSPTTTKE 524
Cdd:PRK14948   443 elwqqilakleLPSTrmllsqqaelvsldsnraviavspnwlgmvqsrkplleqafakvlgrsiklnleSQSGSASNTAK 522

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1331807891  525 PAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKlTPTTPEEL 597
Cdd:PRK14948   523 TPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTP-SPTKDSSP 594

PRK07764

DNA polymerase III subunits gamma and tau; Validated

479-622

1.60e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 46.13 E-value: 1.60e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  479 APTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPttpkepa 558
Cdd:PRK07764   385 LGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPP------- 457

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  559 ptttkkpapttpKEPAPTTPKETAPTTPEKLTPTTpeelAPTTPEEPAPTT-PEEPAPTTPEEPA 622
Cdd:PRK07764   458 ------------PAAAPSAQPAPAPAAAPEPTAAP----APAPPAAPAPAAaPAAPAAPAAPAGA 506

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

462-852

1.90e-04

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 45.91 E-value: 1.90e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPT--TPKEPAPTTPK 539
Cdd:pfam03154  170 QPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTlhPQRLPSPHPPL 249

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  540 KPAPTT-PKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTP 618
Cdd:pfam03154  250 QPMTQPpPPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPP 329

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  619 EEPAPTTLEEPTPTTpeepapttpktaapnTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAP-----TTPKKP 693
Cdd:pfam03154  330 SQSQLQSQQPPREQP---------------LPPAPLSMPHIKPPPTTPIPQLPNPQSHKHPPHLSGPSPfqmnsNLPPPP 394

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  694 APKELAPTTTKEPtsttsdkPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETAST 773
Cdd:pfam03154  395 ALKPLSSLSTHHP-------PSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPF 467

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  774 TPKGTAPTTlkepAPTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAPTIP-KEPAPTTPKKPapttPETPPPTTS 852
Cdd:pfam03154  468 VPGGPPPIT----PPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCPLPPVQiKEEALDEAEEP----ESPPPPPRS 539

Cornifin

pfam02389

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small ...

472-555

1.99e-04

Cornifin (SPRR) family; SPRR genes (formerly SPR) encode a novel class of polypeptides (small proline rich proteins) that are strongly induced during differentiation of human epidermal keratinocytes in vitro and in vivo. The most characteriztic feature of the SPRR gene family resides in the structure of the central segments of the encoded polypeptides that are built up from tandemly repeated units of either eight (SPRR1 and SPRR3) or nine (SPRR2) amino acids with the general consensus XKXPEPXX where X is any amino acid. In order to avoid bacterial contamination due to the high polar-nature of the HMM the threshold has been set very high.

Pssm-ID: 280537 [Multi-domain] Cd Length: 135 Bit Score: 42.73 E-value: 1.99e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  472 PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSA-PTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETA 550
Cdd:pfam02389   32 PCNPKVPEPCCPKVPEPCCPKVPEPCCPKVPEPCCPKVPePCYPKVPEPCSPKVPEPCHPKAPEPCHPKVPEPCYPKAPE 111


                   ....*
gi 1331807891  551 PTTPK 555
Cdd:pfam02389  112 PCQPK 116

PRK07994

DNA polymerase III subunits gamma and tau; Validated

541-699

2.24e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.63 E-value: 2.24e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  541 PAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPttpEEPAPTTPEE 620
Cdd:PRK07994   366 PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRA---QGATKAKKSE 442

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  621 PAPTTLEEPTPTTPEE-PAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELA 699
Cdd:PRK07994   443 PAAASRARPVNSALERlASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAAEAIE 522

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

482-549

2.40e-04

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 45.44 E-value: 2.40e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1331807891  482 APKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKET 549
Cdd:PTZ00144   123 APPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

643-697

2.88e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 45.65 E-value: 2.88e-04

                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  643 KTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 697
Cdd:PRK12270    52 AAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAA 106

PRK07994

DNA polymerase III subunits gamma and tau; Validated

422-556

3.32e-04

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 45.24 E-value: 3.32e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  422 PPTSPTTPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAP--KKPAPTTPKEPAPTTP 499
Cdd:PRK07994   367 EPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQlqRAQGATKAKKSEPAAA 446

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 1331807891  500 KEPAPTTTKSAPTTPKEPSPTTTkePAPTTPKEPAPTTPKKPAPTtpKETAPTTPKE 556
Cdd:PRK07994   447 SRARPVNSALERLASVRPAPSAL--EKAPAKKEAYRWKATNPVEV--KKEPVATPKA 499

PRK12323

DNA polymerase III subunit gamma/tau;

548-779

3.58e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.87 E-value: 3.58e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  548 ETAPTTPKEPA-PTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPeEPAPttpeEPAPTTPEEPAPTTL 626
Cdd:PRK12323   371 GAGPATAAAAPvAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARR-SPAP----EALAAARQASARGPG 445

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  627 EEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlkEPAPTTPKKPAPKELAPTTTKEP 706
Cdd:PRK12323   446 GAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPW---EELPPEFASPAPAQPDAAPAGWV 522

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1331807891  707 TSTTSDkPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTA 779
Cdd:PRK12323   523 AESIPD-PATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPALAARLPVRGLA 594

COG5373

Uncharacterized membrane protein [Function unknown];

477-545

3.65e-04

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 44.99 E-value: 3.65e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  477 EPAPTAPKKPAPTTPKEPAPTTPKEPAPtttKSAPT-TPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTT 545
Cdd:COG5373     38 AEAAEAASAPAEPEPEAAAAATAAAPEA---APAPVpEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK10905

cell division protein DamX; Validated

473-585

3.78e-04

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 44.16 E-value: 3.78e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  473 TTPKEPAPTAPKKPApTTPKEPAPTTPKEPAPTT---TKSAPTTPKEPSPTTTKEPapttpkEPAPTTPKKPAPTTPKET 549
Cdd:PRK10905   122 TLPTEPATVAPVRNG-NASRQTAKTQTAERPATTrpaRKQAVIEPKKPQATAKTEP------KPVAQTPKRTEPAAPVAS 194

                           90       100       110
                   ....*....|....*....|....*....|....*.
gi 1331807891  550 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTT 585
Cdd:PRK10905   195 TKAPAATSTPAPKETATTAPVQTASPAQTTATPAAG 230

DUF5585

pfam17823

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

463-794

4.23e-04

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.

Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 44.57 E-value: 4.23e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT---PKEPAPTTPK 539
Cdd:pfam17823   67 PAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAiaaLPSEAFSAPR 146

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  540 KPAPTTPKETAPTTP-----KEPAPTTTKKPAPTTPKEPAPTTPKETAP-----TTPEKLTPTTPEELAPTTPEEPAPTT 609
Cdd:pfam17823  147 AAACRANASAAPRAAiaaasAPHAASPAPRTAASSTTAASSTTAASSAPttaasSAPATLTPARGISTAATATGHPAAGT 226

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  610 PEEPAPTTPEEP-----APTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPkEPAPTTPKET------APTTPKGTA 678
Cdd:pfam17823  227 ALAAVGNSSPAAgtvtaAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRL-SPAKHMPSDTmarnpaAPMGAQAQG 305

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  679 PT---TLKEPAPTTPKKPAPK-ELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGT 754
Cdd:pfam17823  306 PIiqvSTDQPVHNTAGEPTPSpSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVLHTSMIPEVEATSPTTQPSP 385

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|
gi 1331807891  755 APTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKP 794
Cdd:pfam17823  386 LLPTQGAAGPGILLAPEQVATEATAGTASAGPTPRSSGDP 425

PRK10263

DNA translocase FtsK; Provisional

324-551

4.40e-04

DNA translocase FtsK; Provisional

Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 45.08 E-value: 4.40e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  324 TATTIKSAPTTPKEPAPTTPK-EPAPTTPK-----EPAPTTTKSLHPPLPRSlHPPLPRSLHPPPPRSLHPPLPRSLHPP 397
Cdd:PRK10263   328 TATQSWAAPVEPVTQTPPVASvDVPPAQPTvawqpVPGPQTGEPVIAPAPEG-YPQQSQYAQPAVQYNEPLQQPVQPQQP 406

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  398 PPSLHPPLPRSlhpppqepaptppppTSPTTPKKPAPTTPKEPAPtTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKE 477
Cdd:PRK10263   407 YYAPAAEQPAQ---------------QPYYAPAPEQPAQQPYYAP-APEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQ 470

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  478 PAPTAPKKPAPtTPKEPAPTTpkEPAPTTTKSAPTTPK----------------------EPSPTTTKEPAPTTPKEPAP 535
Cdd:PRK10263   471 PAAQEPLYQQP-QPVEQQPVV--EPEPVVEETKPARPPlyyfeeveekrarereqlaawyQPIPEPVKEPEPIKSSLKAP 547

                          250
                   ....*....|....*.
gi 1331807891  536 TTPKKPAPTTPKETAP 551
Cdd:PRK10263   548 SVAAVPPVEAAAAVSP 563

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

580-712

5.25e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 44.32 E-value: 5.25e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  580 ETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTtpeEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTtpk 659
Cdd:PRK14951   370 AEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAA---PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPA--- 443

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1331807891  660 ePAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSD 712
Cdd:PRK14951   444 -AVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

589-684

5.42e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.42 E-value: 5.42e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  589 LTPTTPEELAPTTPEEPAPTTPEePAPTTPEEPAPTTLEEPTPTTPEEPApttpKTAAPNTPKEPAPTTPKEPAPTTPKE 668
Cdd:PRK14950   360 LVPVPAPQPAKPTAAAPSPVRPT-PAPSTRPKAAAAANIPPKEPVRETAT----PPPVPPRPVAPPVPHTPESAPKLTRA 434

                           90
                   ....*....|....*...
gi 1331807891  669 TAP--TTPKGTAPTTLKE 684
Cdd:PRK14950   435 AIPvdEKPKYTPPAPPKE 452

PRK10905

cell division protein DamX; Validated

464-555

5.56e-04

cell division protein DamX; Validated

Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.77 E-value: 5.56e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  464 APTTTKSAPTTPKEPAPTAPKKPAPTTPKEP---APTTPKEPAPTTTKSAPTTPKEPspttTKEPAPTTPKEPAPTTPKK 540
Cdd:PRK10905   138 ASRQTAKTQTAERPATTRPARKQAVIEPKKPqatAKTEPKPVAQTPKRTEPAAPVAS----TKAPAATSTPAPKETATTA 213

                           90
                   ....*....|....*.
gi 1331807891  541 PAPT-TPKETAPTTPK 555
Cdd:PRK10905   214 PVQTaSPAQTTATPAA 229

PRK14971

DNA polymerase III subunit gamma/tau;

481-619

5.61e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237874 [Multi-domain] Cd Length: 614 Bit Score: 44.38 E-value: 5.61e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  481 TAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTtpkePSPTTTKEPAPTTPKEPApttpkkpapTTPKETAPTTPKEPAPT 560
Cdd:PRK14971   368 DASGGRGPKQHIKPVFTQPAAAPQPSAAAAAS----PSPSQSSAAAQPSAPQSA---------TQPAGTPPTVSVDPPAA 434

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 1331807891  561 TTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPE 619
Cdd:PRK14971   435 VPVNPPSTAPQAVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAEQATGNIKEAPTGTQ 493

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

517-612

6.20e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 6.20e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  517 PSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPkepaptttkkpapttpKEPAPTTPKETAPTTPEKLTPTTPEE 596
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP----------------AAAAPAAPPKPAAAAAAAAAPAAPPA 101

                           90
                   ....*....|....*.
gi 1331807891  597 LAPTTPEEPAPTTPEE 612
Cdd:PRK12270   102 AAAAAAPAAAAVEDEV 117

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

605-699

6.42e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 6.42e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  605 PAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTtlke 684
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV---- 113

                           90
                   ....*....|....*
gi 1331807891  685 PAPTTPKKPAPKELA 699
Cdd:PRK12270   114 EDEVTPLRGAAAAVA 128

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

464-527

6.56e-04

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 43.73 E-value: 6.56e-04

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1331807891  464 APTTTKSAPTTPKEPAPTAPkkPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAP 527
Cdd:TIGR00601   83 KVAPPAATPTSAPTPTPSPP--ASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSSGS 144

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

479-680

6.76e-04

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 43.81 E-value: 6.76e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  479 APTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT--TPKEPSPTTTKEPA-PTTPKEPAPTTPKKPAPTTPKETAPTTPK 555
Cdd:PRK13108   275 APKGREAPGALRGSEYVVDEALEREPAELAAAAVasAASAVGPVGPGEPNqPDDVAEAVKAEVAEVTDEVAAESVVQVAD 354

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  556 EPAPTTTKKPAPTTPKEPAPTtPKETAPTTPEKltPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPapttleeptpttpe 635
Cdd:PRK13108   355 RDGESTPAVEETSEADIEREQ-PGDLAGQAPAA--HQVDAEAASAAPEEPAALASEAHDETEPEVP-------------- 417

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*
gi 1331807891  636 epapttpKTAAPntpkEPAPTTPKEPAPTTPkETAPTTPKGTAPT 680
Cdd:PRK13108   418 -------EKAAP----IPDPAKPDELAVAGP-GDDPAEPDGIRRQ 450

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

433-508

6.81e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.50 E-value: 6.81e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1331807891  433 APTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTK 508
Cdd:PRK12270    54 AASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTPLRGAAAAVAK 129

PRK14954

DNA polymerase III subunits gamma and tau; Provisional

464-551

6.93e-04

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 44.16 E-value: 6.93e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  464 APTTTKSAPTTPKepaptAPKKPAPTTPKEPAPTTPKEPAptttkSAPTTpkEPSPTTTkepapTTPKEPAPTTPKKPAP 543
Cdd:PRK14954   381 APSPAGSPDVKKK-----APEPDLPQPDRHPGPAKPEAPG-----ARPAE--LPSPASA-----PTPEQQPPVARSAPLP 443


                   ....*...
gi 1331807891  544 TTPKETAP 551
Cdd:PRK14954   444 PSPQASAP 451

PRK14948

DNA polymerase III subunit gamma/tau;

441-519

6.98e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237862 [Multi-domain] Cd Length: 620 Bit Score: 44.18 E-value: 6.98e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1331807891  441 APTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSP 519
Cdd:PRK14948   518 SNTAKTPPPPQKSPPPPAPTPPLPQPTATAPPPTPPPPPPTATQASSNAPAQIPADSSPPPPIPEEPTPSPTKDSSPEE 596

PHA03378

EBNA-3B; Provisional

434-600

7.43e-04

EBNA-3B; Provisional

Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 44.29 E-value: 7.43e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  434 PTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTttksaPTTPKEPAPTAPKKP-APTTPKEPAPTTPKEPAPTTTKSAPT 512
Cdd:PHA03378   670 GHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPT-----PMRPPAAPPGRAQRPaAATGRARPPAAAPGRARPPAAAPGRA 744

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  513 TPKEPSPTTTKEPAPT-TPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTttkkpapttpkePAPTTPKETAPTTPEKLTP 591
Cdd:PHA03378   745 RPPAAAPGRARPPAAApGRARPPAAAPGAPTPQPPPQAPPAPQQRPRGA------------PTPQPPPQAGPTSMQLMPR 812


                   ....*....
gi 1331807891  592 TTPEELAPT 600
Cdd:PHA03378   813 AAPGQQGPT 821

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

644-718

7.47e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 7.47e-04

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  644 TAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTlkEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTT 718
Cdd:PRK12270    45 TAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAA--PPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEV 117

PRK12323

DNA polymerase III subunit gamma/tau;

330-546

7.90e-04

DNA polymerase III subunit gamma/tau;

Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 44.10 E-value: 7.90e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  330 SAPTTPKE-PAPTTPKEPAPTTPKEPAPTTTKSLHPPLPRSLHPPLPrslhpppprslHPPLPRSLHPPPPSLHPPLPRS 408
Cdd:PRK12323   372 AGPATAAAaPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARA-----------VAAAPARRSPAPEALAAARQAS 440

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  409 LHPPPQEPAPTPPPPTSPTTPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTttkePAPTTTKSAPTTPKEPAPTAPKKPAP 488
Cdd:PRK12323   441 ARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPA----PADDDPPPWEELPPEFASPAPAQPDA 516

                          170       180       190       200       210
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1331807891  489 TTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 546
Cdd:PRK12323   517 APAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLP 574

PHA03307

transcriptional regulator ICP4; Provisional

338-696

8.04e-04

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.01 E-value: 8.04e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  338 PAPTTPKEPAPTTPKEPAPTTTKSLHPPLPRSLHPPLPRSLHPPPPRSLHPPLPRSLHPPPPSLHPPLPRSLHPPPQEPA 417
Cdd:PHA03307    44 VSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPP 123

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  418 ptpppptspttpKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPttpkEPAPT 497
Cdd:PHA03307   124 ------------ASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEET----ARAPS 187

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  498 TPKEPAPTTTKSAPTTPKEPSPtttKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPA--- 574
Cdd:PHA03307   188 SPPAEPPPSTPPAAASPRPPRR---SSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPApit 264

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  575 -PTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAP-TTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKE 652
Cdd:PHA03307   265 lPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGpAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPG 344

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....
gi 1331807891  653 PAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPK 696
Cdd:PHA03307   345 PSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAGRPTRR 388

PTZ00449

104 kDa microneme/rhoptry antigen; Provisional

469-781

8.38e-04

104 kDa microneme/rhoptry antigen; Provisional

Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.91 E-value: 8.38e-04

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  469 KSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTP----KEP----SPTTTKEPAPTtpKEPAPTTPKK 540
Cdd:PTZ00449   491 KSKKKLAPIEEEDSDKHDEPPEGPEASGLPPKAPGDKEGEEGEHEDskesDEPkeggKPGETKEGEVG--KKPGPAKEHK 568

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  541 PA--PT-TPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKetAPTTPE--KLTPTTPEELAPTTPEEPAPTTpeepAP 615
Cdd:PTZ00449   569 PSkiPTlSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK--SPKLPEllDIPKSPKRPESPKSPKRPPPPQ----RP 642

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  616 TTPEEPAPTTLEEPTPTTPEEPAPTTPK----------TAAPNTPKEPAPTTPKEPAPTTPKETAPTTPkGTAPTTlkeP 685
Cdd:PTZ00449   643 SSPERPEGPKIIKSPKPPKSPKPPFDPKfkekfyddylDAAAKSKETKTTVVLDESFESILKETLPETP-GTPFTT---P 718

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  686 APTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPTTPKgTAPT 765
Cdd:PTZ00449   719 RPLPPKLPRDEEFPFEPIGDPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAM-KRPD 797

                          330
                   ....*....|....*.
gi 1331807891  766 TPKETaSTTPKGTAPT 781
Cdd:PTZ00449   798 SPSEH-EDKPPGDHPS 812

PRK07764

DNA polymerase III subunits gamma and tau; Validated

471-833

1.07e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 1.07e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  471 APTTPKEPAPTAPKKPAPTtPKEPAPTTPKEPAP-TTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKET 549
Cdd:PRK07764   393 APAAAAPSAAAAAPAAAPA-PAAAAPAAAAAPAPaAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPA 471

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  550 APTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAP------------------------TTPEKLTPTTPEELAPTT---- 601
Cdd:PRK07764   472 AAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGaddaatlrerwpeilaavpkrsrkTWAILLPEATVLGVRGDTlvlg 551

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  602 --------------------------------PEEPAPTTPEEPAPTTPEEPApttleeptpttpeepapttPKTAAPNT 649
Cdd:PRK07764   552 fstgglarrfaspgnaevlvtalaeelggdwqVEAVVGPAPGAAGGEGPPAPA-------------------SSGPPEEA 612

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  650 PKEPAPTTPKEPAPTTPkETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEE 729
Cdd:PRK07764   613 ARPAAPAAPAAPAAPAP-AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPA 691

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  730 TAPTTPEETAPttpkgTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKP--APKELAPTTTKKP 807
Cdd:PRK07764   692 APAGAAPAQPA-----PAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPagAPAQPPPPPAPAP 766

                          410       420
                   ....*....|....*....|....*.
gi 1331807891  808 TSTTSDKPAPTIPKETAPTIPKEPAP 833
Cdd:PRK07764   767 AAAPAAAPPPSPPSEEEEMAEDDAPS 792

DUF4045

pfam13254

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...

470-618

1.12e-03

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.

Pssm-ID: 433066 [Multi-domain] Cd Length: 415 Bit Score: 43.23 E-value: 1.12e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  470 SAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKET 549
Cdd:pfam13254  203 VTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEADTLSTDKEQSPAPTSASEPPPKTKELPKDSEEPAAPSKSAE 282

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1331807891  550 APTTPKEpaptttkkpaPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPttpeEPAPTTP 618
Cdd:pfam13254  283 ASTEKKE----------PDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSP----KPKPQSP 337

COG5373

Uncharacterized membrane protein [Function unknown];

492-556

1.14e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 43.45 E-value: 1.14e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  492 KEPAPTTPKEPAPtttkSAPTTPKEPSPTTTKEPAPTTPKEPaPTTPKKPAPTTPKETAPTTPKE 556
Cdd:COG5373     40 AAEAASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAP-PAAAEAPAPAAAAPPAEAEPAA 99

PHA03307

transcriptional regulator ICP4; Provisional

216-545

1.24e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 43.62 E-value: 1.24e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  216 NPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKPETT 295
Cdd:PHA03307    72 PPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAAS 151

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  296 TKGPALTTpkeptpttpKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSLHPPLprSLHPPLP 375
Cdd:PHA03307   152 PPAAGASP---------AAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPI--SASASSP 220

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  376 RSLHPPPPRSLHPPLPRSLHPPPPSLHPPLPRSLHPPPQEPAPTPPPPTSPTTPKKPAPTTPKEPAPTTPKEPAPTTTKS 455
Cdd:PHA03307   221 APAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSP 300

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  456 APTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 535
Cdd:PHA03307   301 SSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAA 380

                          330
                   ....*....|
gi 1331807891  536 TTPKKPAPTT 545
Cdd:PHA03307   381 SAGRPTRRRA 390

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

532-696

1.24e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 42.83 E-value: 1.24e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  532 EPAPTTPKKPAPTTPKETapttpKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTpekltptTPEELAPTTPEEPAPTTPE 611
Cdd:NF040712   189 DPDFGRPLRPLATVPRLA-----REPADARPEEVEPAPAAEGAPATDSDPAEAG-------TPDDLASARRRRAGVEQPE 256

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  612 EPAPTTPEEPAPTTLEEPTPTTpeepapttpktaAPNTPKEPAPTTPKEPAPTTPK-ETAPTTPKGTAPTTLKEPAPTTP 690
Cdd:NF040712   257 DEPVGPGAAPAAEPDEATRDAG------------EPPAPGAAETPEAAEPPAPAPAaPAAPAAPEAEEPARPEPPPAPKP 324


                   ....*.
gi 1331807891  691 KKPAPK 696
Cdd:NF040712   325 KRRRRR 330

PHA03369

capsid maturational protease; Provisional

462-799

1.46e-03

capsid maturational protease; Provisional

Pssm-ID: 223061 [Multi-domain] Cd Length: 663 Bit Score: 43.06 E-value: 1.46e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPkepaPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PHA03369   346 EILKTASLTAPSRVLAAAAKVAVIAAPQTHTGPADRQR----PQRPDGIPYSVPARSPMTAYPPVPQFCGDPGLVSPYNP 421

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  542 -APTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEepAPTTPEEPAPTTPEE 620
Cdd:PHA03369   422 qSPGTSYGPEPVGPVPPQPTNPYVMPISMANMVYPGHPQEHGHERKRKRGGELKEELIETLKL--VKKLKEEQESLAKEL 499

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  621 PAPTTLEEPTPTTPEEPAPTTPKTAAPN-----TPKEPAPTTpKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPkkPAP 695
Cdd:PHA03369   500 EATAHKSEIKKIAESEFKNAGAKTAAANiepncSADAAAPAT-KRARPETKTELEAVVRFPYQIRNMESPAFVHS--FTS 576

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  696 KELAPTTTKEPTSTTSDKPAPTTPKETAPTTPEEtapttpeetapttpkgtaPTTPKGTAPTTPKGTAPTTPKETASTTP 775
Cdd:PHA03369   577 TTLAAAAGQGSDTAEALAGAIETLLTQASAQPAG------------------LSLPAPAVPVNASTPASTPPPLAPQEPP 638

                          330       340
                   ....*....|....*....|....
gi 1331807891  776 KGTAPTTLKEPAPTTPKKPAPKEL 799
Cdd:PHA03369   639 QPGTSAPSLETSLPQQKPVLSKGA 662

PRK07764

DNA polymerase III subunits gamma and tau; Validated

467-583

1.47e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 1.47e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  467 TTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPkEPSPTTTKEPAPTTP-KEPAPTTPKKPAPTT 545
Cdd:PRK07764   386 GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAP-APAPAPAPPSPAGNApAGGAPSPPPAAAPSA 464

                           90       100       110
                   ....*....|....*....|....*....|....*...
gi 1331807891  546 PKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAP 583
Cdd:PRK07764   465 QPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAA 502

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

497-554

1.57e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.57 E-value: 1.57e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  497 TTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP---TTPKKPAPTTPKETAPTTP 554
Cdd:TIGR00601   75 SKPKTGTGKVAPPAATPTSAPTPTPSPPASPASGMSAAPasaVEEKSPSEESATATAPESP 135

PRK04654

sec-independent translocase; Provisional

471-541

1.60e-03

sec-independent translocase; Provisional

Pssm-ID: 135173 [Multi-domain] Cd Length: 214 Bit Score: 41.72 E-value: 1.60e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1331807891  471 APTTPKEPAP----TAPKKPAPTTPKEPAPTTPKEPAPTTT--KSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 541
Cdd:PRK04654   138 AHTPVPAPAPviaqAQPIAPAPHQTLVPAPHDTIVPAPHAAhlPSAPATPVSVAPVDAGTSASPTPSEPTKIQEKQP 214

rad23

TIGR00601

UV excision repair protein Rad23; All proteins in this family for which functions are known ...

487-556

1.81e-03

Pssm-ID: 273167 [Multi-domain] Cd Length: 378 Bit Score: 42.19 E-value: 1.81e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  487 APTTPKEPAPTTPKEPAPTTtksapttpkEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 556
Cdd:TIGR00601   82 GKVAPPAATPTSAPTPTPSP---------PASPASGMSAAPASAVEEKSPSEESATATAPESPSTSVPSS 142

rplD

PRK14907

50S ribosomal protein L4; Provisional

488-597

1.90e-03

50S ribosomal protein L4; Provisional

Pssm-ID: 184900 [Multi-domain] Cd Length: 295 Bit Score: 41.86 E-value: 1.90e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  488 PTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTT-PKKPAPTTPKETAPTTPKEPAPTTTKKPA 566
Cdd:PRK14907     2 AETKKTTKKKTTEEKKPAAKKATTSKETAKTKKTAKTTSTKAAKKAAKVKkTKSVKTTTKKVTVKFEKTESVKKESVAKK 81

                           90       100       110
                   ....*....|....*....|....*....|.
gi 1331807891  567 PTTPkePAPTTPKETAPTTPEKLTPTTPEEL 597
Cdd:PRK14907    82 TVKK--EAVSAEVFEASNKLFKNTSKLPKKL 110

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

466-536

1.99e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 42.36 E-value: 1.99e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  466 TTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPT 536
Cdd:PTZ00144   120 TGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRET 190

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

434-796

2.02e-03

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 42.60 E-value: 2.02e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  434 PTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPkEPAP----TAPKKPAPTTPKEPAPT-TPKEPAPTTTK 508
Cdd:pfam05109  449 PSSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTP-SPSPrdngTESKAPDMTSPTSAVTTpTPNATSPTPAV 527

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  509 SAPTtPKEPSPT---TTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTT-TKKPAPTTPKEPAPTTPKETAPT 584
Cdd:pfam05109  528 TTPT-PNATSPTlgkTSPTSAVTTPTPNATSPTPAVTTPTPNATIPTLGKTSPTSAvTTPTPNATSPTVGETSPQANTTN 606

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  585 TPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPE-----EPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKE------P 653
Cdd:pfam05109  607 HTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTssmslRPSSISETLSPSTSDNSTSHMPLLTSAHPTGGEnitqvtP 686

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  654 APTTPKEPAPTTPKETAPTTPKGTAP---TTLKEPAPTTPKKPAPKELAPTTTKEPTSTTsdkpapTTPKETAPTTPEET 730
Cdd:pfam05109  687 ASTSTHHVSTSSPAPRPGTTSQASGPgnsSTSTKPGEVNVTKGTPPKNATSPQAPSGQKT------AVPTVTSTGGKANS 760

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1331807891  731 APTTPEETAPTTPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKPAP 796
Cdd:pfam05109  761 TTGGKHTTGHGARTSTEPTTDYGGDSTTPRTRYNATTYLPPSTSSKLRPRWTFTSPPVTTAQATVP 826

PRK07764

DNA polymerase III subunits gamma and tau; Validated

433-719

2.04e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 2.04e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTkSAPTTPKEPAPTAPKKPAPTTPkePAPTTPKEPAPTTTKSAPT 512
Cdd:PRK07764   416 APAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAG-GAPSPPPAAAPSAQPAPAPAAA--PEPTAAPAPAPPAAPAPAA 492

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  513 TPKEPSPTTTKEPAP----------------------------------------------------------------- 527
Cdd:PRK07764   493 APAAPAAPAAPAGADdaatlrerwpeilaavpkrsrktwaillpeatvlgvrgdtlvlgfstgglarrfaspgnaevlvt 572

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  528 -----------------TTPKEPAPTTPKKPAPTTPKET--APTTPkepaPTTTKKPAPTTPKEPAPTTPKETAPTTPEK 588
Cdd:PRK07764   573 alaeelggdwqveavvgPAPGAAGGEGPPAPASSGPPEEaaRPAAP----AAPAAPAAPAPAGAAAAPAEASAAPAPGVA 648

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  589 LTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKE 668
Cdd:PRK07764   649 APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGA 728

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  669 TAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTTP 719
Cdd:PRK07764   729 SAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPP 779

PHA03307

transcriptional regulator ICP4; Provisional

517-869

2.14e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.85 E-value: 2.14e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  517 PSPTTTKEPAPTTPKEPAPttPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEE 596
Cdd:PHA03307    22 PRPPATPGDAADDLLSGSQ--GQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPAS 99

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  597 LAPT---TPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTT--------PKEPAPTT 665
Cdd:PHA03307   100 PAREgspTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVAsdaassrqAALPLSSP 179

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  666 PKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA----PTTPKETAPTTPEETAPTTPEETAPT 741
Cdd:PHA03307   180 EETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAAddagASSSDSSSSESSGCGWGPENECPLPR 259

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  742 TPKGTAPTTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKPAPKElaptTTKKPTSTTSDKPAPTIPK 821
Cdd:PHA03307   260 PAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASS----SSSSSRESSSSSTSSSSES 335

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....*...
gi 1331807891  822 ETAPTIPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKS 869
Cdd:PHA03307   336 SRGAAVSPGPSPSRSPSPSRPPPPADPSSPRKRPRPSRAPSSPAASAG 383

motB

PRK05996

MotB family protein;

464-543

2.16e-03

MotB family protein;

Pssm-ID: 235665 [Multi-domain] Cd Length: 423 Bit Score: 42.38 E-value: 2.16e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  464 APTTTKSAPTTPKEPAPTAPKKPAPTTpkEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAP 543
Cdd:PRK05996   190 VEVTTAGDLLPPGQAREQAQGAKSATA--APATVPQAAPLPQAQPKKAATEEELIADAKKAATGEPAANAAKAAKPEPMP 267

PRK13335

superantigen-like protein SSL3; Reviewed;

464-555

2.37e-03

superantigen-like protein SSL3; Reviewed;

Pssm-ID: 139494 [Multi-domain] Cd Length: 356 Bit Score: 42.04 E-value: 2.37e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  464 APTTTKSAPTTPKEPAPTAPKKPAPTTPK------EPAPTTPKEPAPTTTKSAPTTPKEPSPTTTkePAPTTPKEPAPTT 537
Cdd:PRK13335    58 ANSATTQAANTRQERTPKLEKAPNTNEEKtsaskiEKISQPKQEEQKSLNISATPAPKQEQSQTT--TESTTPKTKVTTP 135

                           90
                   ....*....|....*...
gi 1331807891  538 PKKPAPTTPKETAPTTPK 555
Cdd:PRK13335   136 PSTNTPQPMQSTKSDTPQ 153

rne

PRK10811

ribonuclease E; Reviewed

424-554

2.38e-03

ribonuclease E; Reviewed

Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 42.33 E-value: 2.38e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  424 TSPTTPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEpAPTAPKKPAPTTPKEPAPTTpKEPA 503
Cdd:PRK10811   882 VVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESD-VAVAQEVAEHAEPVVEPQDE-TADI 959

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|.
gi 1331807891  504 PTTTKSAPTTPKEPsPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTP 554
Cdd:PRK10811   960 EEAAETAEVVVAEP-EVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEA 1009

PRK13042

superantigen-like protein SSL4; Reviewed;

467-555

2.39e-03

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 41.54 E-value: 2.39e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  467 TTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTT-PKEPAPTTTKSAPTTPKEPSPTTTkePAPTTPKEPAPTTPKkpAPTT 545
Cdd:PRK13042    17 TTGVITTTTQAANATTPSSTKVEAPQSTPPSTkVEAPQSKPNATTPPSTKVEAPQQT--PNATTPSSTKVETPQ--SPTT 92

                           90
                   ....*....|
gi 1331807891  546 PKETAPTTPK 555
Cdd:PRK13042    93 KQVPTEINPK 102

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

573-668

2.43e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.10 E-value: 2.43e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  573 PAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEepapttpktAAPNTPKE 652
Cdd:PRK14950   364 PAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPE---------SAPKLTRA 434

                           90
                   ....*....|....*...
gi 1331807891  653 --PAPTTPKEPAPTTPKE 668
Cdd:PRK14950   435 aiPVDEKPKYTPPAPPKE 452

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

509-666

2.45e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.68 E-value: 2.45e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  509 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPek 588
Cdd:NF040712   193 GRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEP-- 270

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  589 lTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPtpttpeepapttpktAAPNTPKEPAPTTPKEPA--PTTP 666
Cdd:NF040712   271 -DEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEA---------------EEPARPEPPPAPKPKRRRrrASVP 334

SepH

NF040712

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...

493-622

2.72e-03

Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 41.68 E-value: 2.72e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  493 EPAPTTPKEPAPTTTKSAPT----TPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAPTtpkEPAPTTTKKPAPT 568
Cdd:NF040712   189 DPDFGRPLRPLATVPRLAREpadaRPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGV---EQPEDEPVGPGAA 265

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1331807891  569 TPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPA-PTTPEEPAPTTPEEPA 622
Cdd:NF040712   266 PAAEPDEATRDAGEPPAPGAAETPEAAEPPAPAPAAPAaPAAPEAEEPARPEPPP 320

PRK07764

DNA polymerase III subunits gamma and tau; Validated

330-534

2.87e-03

DNA polymerase III subunits gamma and tau; Validated

Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 2.87e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  330 SAPTTPKEPAPTTPKEPAPTtPKEPAPTTTKSLHPPLPRSLHPPLPRSLHPPPPRSLHPPLPRSLHPPPPSLHPPLPRSL 409
Cdd:PRK07764   595 AGGEGPPAPASSGPPEEAAR-PAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKA 673

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  410 HPPPQEPAPTPPPPTSPTTPKKPAPTTPK-EPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAP 488
Cdd:PRK07764   674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPApAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAG 753

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 1331807891  489 TTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTT---TKEPAPTTPKEPA 534
Cdd:PRK07764   754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAeddAPSMDDEDRRDAE 802

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

602-697

2.96e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 42.18 E-value: 2.96e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  602 PEEPAPTTPEEPAPTTPEEPApttleeptpttpeepapttpkTAAPNTPKEPAPTTPKEPA--PTTPKETAPTTPKGTAP 679
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAP---------------------AAAPAAKAPAAPAPAPPAAaaPAAPPKPAAAAAAAAAP 96

                           90
                   ....*....|....*...
gi 1331807891  680 TTLKEPAPTTPKKPAPKE 697
Cdd:PRK12270    97 AAPPAAAAAAAPAAAAVE 114

PRK14951

DNA polymerase III subunits gamma and tau; Provisional

525-671

3.01e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.01 E-value: 3.01e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  525 PAPTTPKEPAPTTP-KKPAPTTPKETAPTTPkepaptttkkpapTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPE 603
Cdd:PRK14951   376 AEKKTPARPEAAAPaAAPVAQAAAAPAPAAA-------------PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAP 442

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1331807891  604 EPAPTTPEEPAPTTPEEPApttleeptpttpeepapTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAP 671
Cdd:PRK14951   443 AAVALAPAPPAQAAPETVA-----------------IPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493

COG5373

Uncharacterized membrane protein [Function unknown];

438-515

3.09e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.91 E-value: 3.09e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1331807891  438 KEPAPTTPKEPAPtttksaptttkEPAPTTTKSAPTTPKEPAPTAPkKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPK 515
Cdd:COG5373     40 AAEAASAPAEPEP-----------EAAAAATAAAPEAAPAPVPEAP-AAPPAAAEAPAPAAAAPPAEAEPAAAPAAAS 105

PRK11907

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;

464-556

3.17e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;

Pssm-ID: 237019 [Multi-domain] Cd Length: 814 Bit Score: 42.15 E-value: 3.17e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  464 APTTTKSAPTTPKEPAPTAPkkpAPTTPKEPAPTTPkepAPTTTKSAPTTPKEPSPTTTKEPAPTTpkepAPTTPKKPAP 543
Cdd:PRK11907    28 AEEIVTTTPATSTEAEQTTP---VESDATEEADNTE---TPVAATTAAEAPSSSETAETSDPTSEA----TDTTTSEART 97

                           90
                   ....*....|...
gi 1331807891  544 TTPKETAPTTPKE 556
Cdd:PRK11907    98 VTPAATETSKPVE 110

PTZ00144

dihydrolipoamide succinyltransferase; Provisional

463-525

3.33e-03

dihydrolipoamide succinyltransferase; Provisional

Pssm-ID: 240289 [Multi-domain] Cd Length: 418 Bit Score: 41.59 E-value: 3.33e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKKPApttPKEPAPTTPKEPAPTTTKSAPTTPKEP----SPTTTKEP 525
Cdd:PTZ00144   130 AAAAAAKAEKTTPEKPKAAAPTPEP---PAASKPTPPAAAKPPEPAPAAKPPPTPvaraDPRETRVP 193

PHA03269

envelope glycoprotein C; Provisional

462-554

3.42e-03

envelope glycoprotein C; Provisional

Pssm-ID: 165527 [Multi-domain] Cd Length: 566 Bit Score: 41.64 E-value: 3.42e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  462 EPAPTTTKSAPTTP---KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPK-EPSPTTTKEPAPTTPKEPAPTT 537
Cdd:PHA03269    41 DPAPAPHQAASRAPdpaVAPTSAASRKPDLAQAPTPAASEKFDPAPAPHQAASRAPDpAVAPQLAAAPKPDAAEAFTSAA 120

                           90
                   ....*....|....*...
gi 1331807891  538 PKKPAPT-TPKETAPTTP 554
Cdd:PHA03269   121 QAHEAPAdAGTSAASKKP 138

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

256-375

3.67e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.72 E-value: 3.67e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  256 DGKEKTTS----AKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPAlttpkepTPTTPKEPASTTPKEPTATtiksa 331
Cdd:PRK14950   338 DFQLRTTSygqlPLELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPS-------TRPKAAAAANIPPKEPVRE----- 405

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 1331807891  332 pTTPKEPAPTTPKEPAPTTPKEPAPTTTKSLHP-PLPRSLHPPLP 375
Cdd:PRK14950   406 -TATPPPVPPRPVAPPVPHTPESAPKLTRAAIPvDEKPKYTPPAP 449

PHA03307

transcriptional regulator ICP4; Provisional

324-672

4.10e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 4.10e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  324 TATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSLHPPLPRSLHPPlPRSLHPPPPRSLHPPlprSLHPPPPSLHP 403
Cdd:PHA03307    60 AACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPP-GPSSPDPPPPTPPPA---SPPPSPAPDLS 135

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  404 PLPRSLHPPPQEPAPTPPPPTSPTTPKKPAPTTPKEPAPTTPKEPAPTTTKSAptttkePAPTTTKSAPTTPKEPAPTAP 483
Cdd:PHA03307   136 EMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSS------PPAEPPPSTPPAAASPRPPRR 209

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  484 KKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTpkkPAPTTPKETAPTTPKEPAPTTTK 563
Cdd:PHA03307   210 SSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPI---TLPTRIWEASGWNGPSSRPGPAS 286

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  564 KPAPTTPKEPAPTTPKETAPTTPEklTPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPK 643
Cdd:PHA03307   287 SSSSPRERSPSPSPSSPGSGPAPS--SPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSS 364

                          330       340
                   ....*....|....*....|....*....
gi 1331807891  644 TAAPNTPKEPAPTTPKEPAPTTPKETAPT 672
Cdd:PHA03307   365 PRKRPRPSRAPSSPAASAGRPTRRRARAA 393

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

755-855

4.15e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 4.15e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  755 APTTPKGTAPTTPKETASTTPKGTAPTtlKEPAPTTPKKPAPkelaptttkkptsttsdkPAPTIPKETAPTIPKEPAPT 834
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAA--KAPAAPAPAPPAA------------------AAPAAPPKPAAAAAAAAAPA 97

                           90       100
                   ....*....|....*....|.
gi 1331807891  835 TPKKPAPTTPETPPPTTSEVS 855
Cdd:PRK12270    98 APPAAAAAAAPAAAAVEDEVT 118

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

590-686

4.19e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.80 E-value: 4.19e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  590 TPTTPEELAPTTPEEPAPTTPEEPAPTTPEEPAPttleeptpttpEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKET 669
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAP-----------APPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAA 107

                           90
                   ....*....|....*..
gi 1331807891  670 APTTPKGTAPTTLKEPA 686
Cdd:PRK12270   108 PAAAAVEDEVTPLRGAA 124

PHA03307

transcriptional regulator ICP4; Provisional

274-685

4.73e-03

transcriptional regulator ICP4; Provisional

Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 4.73e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  274 SAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKE 353
Cdd:PHA03307    57 AGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSE 136

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  354 PAPTTTKSLHPPLPRSLHPPLPRSlhpppprslhpplprslhPPPPSLHPPLPRSLHPPPQEPAPTPPPPTspttpkkpA 433
Cdd:PHA03307   137 MLRPVGSPGPPPAASPPAAGASPA------------------AVASDAASSRQAALPLSSPEETARAPSSP--------P 190

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  434 PTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTksAPTT 513
Cdd:PHA03307   191 AEPPPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPIT--LPTR 268

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  514 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETAP-TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPekltPT 592
Cdd:PHA03307   269 IWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGpAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVS----PG 344

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  593 TPEELAPTTPEEPAPTTPeePAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPT 672
Cdd:PHA03307   345 PSPSRSPSPSRPPPPADP--SSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAA 422

                          410
                   ....*....|...
gi 1331807891  673 TPKGTAPTTLKEP 685
Cdd:PHA03307   423 SGAFYARYPLLTP 435

COG5373

Uncharacterized membrane protein [Function unknown];

433-498

4.76e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 41.52 E-value: 4.76e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1331807891  433 APTTPKEPAPttpkEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTT 498
Cdd:COG5373     43 AASAPAEPEP----EAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAAAPPAEAEPAAAPAAA 104

PRK13808

adenylate kinase; Provisional

445-550

4.91e-03

adenylate kinase; Provisional

Pssm-ID: 172341 [Multi-domain] Cd Length: 333 Bit Score: 40.64 E-value: 4.91e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  445 PKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPT---TPKEPAPTTTKSAPTTPKEPSPTT 521
Cdd:PRK13808   199 AKKAAKTPAAKSGAKKASAKAKSAAKKVSKKKAAKTAVSAKKAAKTAAKAAKKakkTAKKALKKAAKAVKKAAKKAAKAA 278

                           90       100
                   ....*....|....*....|....*....
gi 1331807891  522 TKEPAPTTPKEPAPTTPKKPAPTTPKETA 550
Cdd:PRK13808   279 AKAAKGAAKATKGKAKAKKKAGKKAAAGS 307

Atrophin-1

pfam03154

Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ...

256-618

4.95e-03

Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 41.29 E-value: 4.95e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  256 DGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKE------PTATTIK 329
Cdd:pfam03154  153 DNESDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNqtqstaAPHTLIQ 232

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  330 SAPT--TPKEPAPTTPKEPAPTTPK----EPAPTTTKSLH---PPLPRSLHPPLPRSLHPPPPRSLHPPLPRSLHPPPPS 400
Cdd:pfam03154  233 QTPTlhPQRLPSPHPPLQPMTQPPPpsqvSPQPLPQPSLHgqmPPMPHSLQTGPSHMQHPVPPQPFPLTPQSSQSQVPPG 312

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  401 LHPPLPRSLHPPPQEPAPTPPPPTSPTTPKKPAPTTPK-----EPAPTTP----------KEPAPTTTKSAPTTTKE-PA 464
Cdd:pfam03154  313 PSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPLPPAPLsmphiKPPPTTPipqlpnpqshKHPPHLSGPSPFQMNSNlPP 392

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  465 PTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPApT 544
Cdd:pfam03154  393 PPALKPLSSLSTHHPPSAHPPPLQLMPQSQQLPPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPG-G 471

                          330       340       350       360       370       380       390
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1331807891  545 TPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPekLTPTTPEELAPTTPEEPAPTTPEEPAPTTP 618
Cdd:pfam03154  472 PPPITPPSGPPTSTSSAMPGIQPPSSASVSSSGPVPAAVSCP--LPPVQIKEEALDEAEEPESPPPPPRSPSPE 543

PRK15313

intestinal colonization autotransporter adhesin MisL;

467-551

4.97e-03

intestinal colonization autotransporter adhesin MisL;

Pssm-ID: 237940 [Multi-domain] Cd Length: 955 Bit Score: 41.32 E-value: 4.97e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  467 TTKSAPTTPKEPAPTAPKKPAPTTPK--EPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPkkpaPT 544
Cdd:PRK15313   555 TSYIEPDEPIIPDPVDPVIPDPVIPDpvDPDPVDPVIPDPVIPDPVDPDPVDPEPVDPVIPDPTIPDIGQSDTP----PI 630


                   ....*..
gi 1331807891  545 TPKETAP 551
Cdd:PRK15313   631 TEHQFRP 637

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

277-361

5.26e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.41 E-value: 5.26e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  277 DLAPTSkvLAKPTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATTIKSAPTTPKEPAPTTPKEPAPTTPKEPAP 356
Cdd:PRK12270    35 DYGPGS--TAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAA 112


                   ....*
gi 1331807891  357 TTTKS 361
Cdd:PRK12270   113 VEDEV 117

PRK12757

cell division protein FtsN; Provisional

488-550

5.27e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.41 E-value: 5.27e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1331807891  488 PTTPKEPAPTTPKEPAPTTTKSAPTTPKEPsptttKEPAPTTPKEPAPTTPKKPAPTTPKETA 550
Cdd:PRK12757   123 QQAQQQQPPATTAQPQPVTPPRQTTAPVQP-----QTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

PRK12373

NADH-quinone oxidoreductase subunit E;

439-550

5.41e-03

NADH-quinone oxidoreductase subunit E;

Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 40.94 E-value: 5.41e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  439 EPA--PTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAP-------TTPKEPAPTTTKS 509
Cdd:PRK12373   189 EPAggLTSLTEEAGKARYNASKALAEDIGDTVKRIDGTEVPLLAPWQGDAAPVPPSEAARpksadaeTNAALKTPATAPK 268

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1331807891  510 APTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKETA 550
Cdd:PRK12373   269 AAAKNAKAPEAQPVSGTAAAEPAPKEAAKAAAAAAKPALED 309

PRK12373

NADH-quinone oxidoreductase subunit E;

433-526

5.70e-03

NADH-quinone oxidoreductase subunit E;

Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 40.94 E-value: 5.70e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  433 APTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKepapTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPT 512
Cdd:PRK12373   231 LAPWQGDAAPVPPSEAARPKSADAETNAALKTPATAPKAAAKNA----KAPEAQPVSGTAAAEPAPKEAAKAAAAAAKPA 306

                           90
                   ....*....|....
gi 1331807891  513 TPKEPSPTTTKEPA 526
Cdd:PRK12373   307 LEDKPRPLGIARPG 320

PRK12757

cell division protein FtsN; Provisional

483-542

5.82e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 40.03 E-value: 5.82e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  483 PKKPAPTTPKEPAPTTPKEPAPTTTksAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 542
Cdd:PRK12757   123 QQAQQQQPPATTAQPQPVTPPRQTT--APVQPQTPAPVRTQPAAPVTQAVEAPKVEAEKE 180

PRK11633

cell division protein DedD; Provisional

439-536

6.17e-03

cell division protein DedD; Provisional

Pssm-ID: 236940 [Multi-domain] Cd Length: 226 Bit Score: 39.99 E-value: 6.17e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  439 EPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPK-EPAPTAPKKPAPTTPKEPAPTTPKEPaptttksapttpkEP 517
Cdd:PRK11633    61 QALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEpEPAPVEPPKPKPVEKPKPKPKPQQKV-------------EA 127

                           90
                   ....*....|....*....
gi 1331807891  518 SPTTTKEPAPTTPKEPAPT 536
Cdd:PRK11633   128 PPAPKPEPKPVVEEKAAPT 146

PRK13042

superantigen-like protein SSL4; Reviewed;

463-531

6.24e-03

superantigen-like protein SSL4; Reviewed;

Pssm-ID: 183854 [Multi-domain] Cd Length: 291 Bit Score: 40.39 E-value: 6.24e-03

                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPK-KPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPK 531
Cdd:PRK13042    33 PSSTKVEAPQSTPPSTKVEAPQsKPNATTPPSTKVEAPQQTPNATTPSSTKVETPQSPTTKQVPTEINPK 102

DedD

COG3147

Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, ...

494-555

6.68e-03

Cell division protein DedD (periplasmic protein involved in septation) [Cell cycle control, cell division, chromosome partitioning];

Pssm-ID: 442381 [Multi-domain] Cd Length: 140 Bit Score: 38.60 E-value: 6.68e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1331807891  494 PAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE-PAPTTPKKPAPTTPKETAPTTPK 555
Cdd:COG3147      1 PAEEAAAAPAAAAAPAAPAAAAAPAPAAAAAAAAPKPAAkPAAPKPAAAAAAAPAAKAAAPAG 63

kgd

PRK12270

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...

288-369

6.72e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;

Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 41.03 E-value: 6.72e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  288 PTPKPETTTKGPALTTPKEPTPTTPKEPASTTPKEPTATtiksAPTTPKEPAPTTPKEPAPTTPKEPAPTTTKSLHPPLP 367
Cdd:PRK12270    40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAA----APAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVED 115


                   ..
gi 1331807891  368 RS 369
Cdd:PRK12270   116 EV 117

ftsN

TIGR02223

cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a ...

521-699

6.94e-03

cell division protein FtsN; FtsN is a poorly conserved protein active in cell division in a number of Proteobacteria. The N-terminal 30 residue region tends to by Lys/Arg-rich, and is followed by a membrane-spanning region. This is followed by an acidic low-complexity region of variable length and a well-conserved C-terminal domain of two tandem regions matched by pfam05036 (Sporulation related repeat), found in several cell division and sporulation proteins. The role of FtsN as a suppressor for other cell division mutations is poorly understood; it may involve cell wall hydrolysis. [Cellular processes, Cell division]

Pssm-ID: 274041 [Multi-domain] Cd Length: 298 Bit Score: 40.06 E-value: 6.94e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  521 TTKEPAPTTPKEPAPTTPKKPAPttpKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPT 600
Cdd:TIGR02223   49 TESKQANEPETLQPKNQTENGET---AADLPPKPEERWSYIEELEAREVLINDPEEPSNGGGVEESAQLTAEQRQLLEQM 125

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  601 TPEEPAPTTPEEPAPTTPEEPAPTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPT 680
Cdd:TIGR02223  126 QADMRAAEKVLATAPSEQTVAVEARKQTAEKKPQKARTAEAQKTPVETEKIASKVKEAKQKQKALPKQTAETQSNSKPIE 205

                          170
                   ....*....|....*....
gi 1331807891  681 TLKEPAPTTPKKPAPKELA 699
Cdd:TIGR02223  206 TAPKADKADKTKPKPKEKA 224

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

597-715

7.31e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.56 E-value: 7.31e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  597 LAPTTPEEPAPTTPEEPAPTTPeepapttleeptpttpeepapttpkTAAPNTPKEPAPTTPKEPAP----TTPKETAPT 672
Cdd:PRK14950   360 LVPVPAPQPAKPTAAAPSPVRP-------------------------TPAPSTRPKAAAAANIPPKEpvreTATPPPVPP 414

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1331807891  673 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPA 715
Cdd:PRK14950   415 RPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAPPKEEEKAL 457

Herpes_BLLF1

pfam05109

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...

463-837

7.63e-03

Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 40.67 E-value: 7.63e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  463 PAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 542
Cdd:pfam05109  425 PESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTADVTSPTPAGTTSGASPVTPSPSPRDNGTESKAP 504

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  543 PTTPKETAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKeTAPTTpeKLTPTTPEELAPTtpeePAPTTPEEPAPTTPEEPA 622
Cdd:pfam05109  505 DMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGK-TSPTS--AVTTPTPNATSPT----PAVTTPTPNATIPTLGKT 577

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  623 PTTLEEPTPTTPEEPAPTTPKTAAPNTPKEPAPTTPKEPAPTTPKETAptTPKGTAPTTLKEPAPTTPKKPAPKELAPTT 702
Cdd:pfam05109  578 SPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNA--TSAVTTGQHNITSSSTSSMSLRPSSISETL 655

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  703 TKEPTSTTSDKPAPTTPKETAPTTPEETAPTTPEETAPTTPKGTAPtTPKGTAPTTPKGTAPTTPKETASTTPKGTAPTT 782
Cdd:pfam05109  656 SPSTSDNSTSHMPLLTSAHPTGGENITQVTPASTSTHHVSTSSPAP-RPGTTSQASGPGNSSTSTKPGEVNVTKGTPPKN 734

                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1331807891  783 LKEP-APTTPKKPAPKELAPTTTKKPTSTTSDKPAPTIPKETAPTIPKEPAPTTPK 837
Cdd:pfam05109  735 ATSPqAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGARTSTEPTTDYGGDSTTPR 790

PRK12757

cell division protein FtsN; Provisional

494-556

8.23e-03

cell division protein FtsN; Provisional

Pssm-ID: 237191 [Multi-domain] Cd Length: 256 Bit Score: 39.64 E-value: 8.23e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1331807891  494 PAPTTPKEPAPTTTKSAPTTPkePSPTTtkepAPTTPKEPAPTTPKKPAPTTPKETAPTTPKE 556
Cdd:PRK12757   122 QQQAQQQQPPATTAQPQPVTP--PRQTT----APVQPQTPAPVRTQPAAPVTQAVEAPKVEAE 178

PRK13108

prolipoprotein diacylglyceryl transferase; Reviewed

471-666

8.65e-03

prolipoprotein diacylglyceryl transferase; Reviewed

Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 40.35 E-value: 8.65e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  471 APTTPKEPAPTAPKKPAPTTPKEPAPT--TPKEPAPTTTKSAPTTPKEPS-PTTTKEPAPTTPKEPAPTTPKKPAPTTPK 547
Cdd:PRK13108   275 APKGREAPGALRGSEYVVDEALEREPAelAAAAVASAASAVGPVGPGEPNqPDDVAEAVKAEVAEVTDEVAAESVVQVAD 354

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  548 ETAPTTPK--EPAPTTTKKPAPTTPKEPAPTTPKETAptTPEKLTPTTPEELAPttpEEPAPTTPEEPAPTTPEepaptt 625
Cdd:PRK13108   355 RDGESTPAveETSEADIEREQPGDLAGQAPAAHQVDA--EAASAAPEEPAALAS---EAHDETEPEVPEKAAPI------ 423

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|.
gi 1331807891  626 leeptpttpeepapttpktAAPNTPKEPAPTTPkEPAPTTP 666
Cdd:PRK13108   424 -------------------PDPAKPDELAVAGP-GDDPAEP 444

PHA03247

large tegument protein UL36; Provisional

646-840

8.89e-03

large tegument protein UL36; Provisional

Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.69 E-value: 8.89e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  646 APNTPKEPAPTTPK-EPAPTTPKETAPTTPKGTA--PTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTSDKPAPTT---- 718
Cdd:PHA03247   268 APETARGATGPPPPpEAAAPNGAAAPPDGVWGAAlaGAPLALPAPPDPPPPAPAGDAEEEDDEDGAMEVVSPLPRPrqhy 347

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  719 ----PKETAPTTPEETAPTTPEETAPTTPKGTAPTTPKGTAPttpKGTAPTTPKETASTTPKGTAPTTLKEPAPTTPKKP 794
Cdd:PHA03247   348 plgfPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRKRRSAR---HAATPFARGPGGDDQTRPAAPVPASVPTPAPTPVP 424

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*.
gi 1331807891  795 APKELAPTTTKkptsttsdkPAPTIPKETAPTIPKEPAPTTPKKPA 840
Cdd:PHA03247   425 ASAPPPPATPL---------PSAEPGSDDGPAPPPERQPPAPATEP 461

PRK14950

DNA polymerase III subunits gamma and tau; Provisional

433-501

8.90e-03

DNA polymerase III subunits gamma and tau; Provisional

Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 40.56 E-value: 8.90e-03

                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1331807891  433 APTTPKEPAPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKE 501
Cdd:PRK14950   384 APSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPESAPKLTRAAIPVDEKPKYTPPAPPKE 452

PRK07003

DNA polymerase III subunit gamma/tau;

477-798

9.46e-03

DNA polymerase III subunit gamma/tau;

Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 40.60 E-value: 9.46e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  477 EPAPTAPKKPAPTTPKEPAPTTPKePAPTTTKSAPTTPKEPSPTTTKepAPTTPKEPAPTTPKKPAPttpkETAPTTPKE 556
Cdd:PRK07003   359 EPAVTGGGAPGGGVPARVAGAVPA-PGARAAAAVGASAVPAVTAVTG--AAGAALAPKAAAAAAATR----AEAPPAAPA 431

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  557 PAPTTTKKPAPTTPKEPAPTTPKETAPTTPEKLTPTTPEELAPTTPEEPAPTTPEePAPTTPEEPAPTTLEEPTPTTPEE 636
Cdd:PRK07003   432 PPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPP-DAAFEPAPRAAAPSAATPAAVPDA 510

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  637 PAPttpktAAPNTPKEPAPttPKEPAPttpkETAPTTPKGTAPttlkePAPTTPKKPAPKELAPTTTKEPTSTTSDKPAP 716
Cdd:PRK07003   511 RAP-----AAASREDAPAA--AAPPAP----EARPPTPAAAAP-----AARAGGAAAALDVLRNAGMRVSSDRGARAAAA 574

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  717 ttpketapttpeetapttpeetapttPKGTAPtTPKGTAPTTPKGTAPT-TPKETASTTPKGTAPTTLKEPAPTTPKKPA 795
Cdd:PRK07003   575 --------------------------AKPAAA-PAAAPKPAAPRVAVQVpTPRARAATGDAPPNGAARAEQAAESRGAPP 627


                   ...
gi 1331807891  796 PKE 798
Cdd:PRK07003   628 PWE 630

COG5373

Uncharacterized membrane protein [Function unknown];

596-673

9.94e-03

Uncharacterized membrane protein [Function unknown];

Pssm-ID: 444140 [Multi-domain] Cd Length: 854 Bit Score: 40.37 E-value: 9.94e-03

                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1331807891  596 ELAPTTPEEPAPT---TPEEPAPTTPEEPAPTTLEeptpttpeepapttpktAAPNTPKEPAPTTPKEPAPTTPKETAPT 672
Cdd:COG5373     41 AEAASAPAEPEPEaaaAATAAAPEAAPAPVPEAPA-----------------APPAAAEAPAPAAAAPPAEAEPAAAPAA 103


                   .
gi 1331807891  673 T 673
Cdd:COG5373    104 A 104

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01