|
Name |
Accession |
Description |
Interval |
E-value |
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
13-414 |
4.25e-90 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 276.79 E-value: 4.25e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 13 LSSAYYLQAGGHEVTVIDKTDMSSNCSYGNAGYVCPSHFTPlatpgivkqglkwmwnskspfyvqprlsrslinwgmqfm 92
Cdd:COG0665 15 LSTAYHLARRGLDVTVLERGRPGSGASGRNAGQLRPGLAAL--------------------------------------- 55
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 93 kaatqqhvedSAIPLRDIAILSKKMYEEWTALPQFNFAYEHKGLLEIFQTPEGAEHAKHVVEKARELGLtDTALLDYDAL 172
Cdd:COG0665 56 ----------ADRALVRLAREALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRALGL-PVELLDAAEL 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 173 QAMEPQTRINA-QGAVFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFENANGNITQLITTNGAYHADTVVIAGG 251
Cdd:COG0665 125 REREPGLGSPDyAGGLYDPDDGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAG 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 252 SWSRELAAKMNVSIPLVPGRGYSVTLEDSPYRLNYPaILVEGRVAMTPMDGNKLRMGGTMEITSTQTPPRLKRVQGILDA 331
Cdd:COG0665 205 AWSARLLPMLGLRLPLRPVRGYVLVTEPLPDLPLRP-VLDDTGVYLRPTADGRLLVGGTAEPAGFDRAPTPERLEALLRR 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 332 VKKFYPEF-NVPMPAAdkiWYGYRPCSADGLPYLGRTRQWKNVVLATGHAMLGLSLGAGTGKLVSEVVDERETSMDIRPF 410
Cdd:COG0665 284 LRRLFPALaDAEIVRA---WAGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPF 360
|
....
gi 1354626266 411 NPDR 414
Cdd:COG0665 361 SPDR 364
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
13-415 |
4.47e-56 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 190.40 E-value: 4.47e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 13 LSSAYYLQAGGHEVTVIDKTDMSS-NCSYGNAGYVCPSHFTPLATPGIVKQGLKWMWNSKSPFYVQPRLSRSLINWGMQF 91
Cdd:PRK00711 13 VTSAWYLAQAGHEVTVIDRQPGPAlETSFANAGQISPGYAAPWAAPGVPLKAIKWLFQRHAPLAIRPDGDPFQLRWMWQM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 92 MKAATQQHVEDSAIPLRDIAILSKKMYEEWTAlpQFNFAYEH--KGLLEIFQTPEGAEHAKHVVEKARELGlTDTALLDY 169
Cdd:PRK00711 93 LRNCTASRYAVNKSRMVRLAEYSRDCLKALRA--ETGIQYEGrqGGTLQLFRTQQQLDAAAKDIAVLEEAG-VPYELLDR 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 170 DALQAMEPqtrinAQGAVFFRCDAHLY-PN-------KLMQQLIADLKQKGVRIQTNEEVIRFENANGNITQLITTNGAY 241
Cdd:PRK00711 170 DELAAVEP-----ALAGVRHKLVGGLRlPNdetgdcqLFTQRLAAMAEQLGVKFRFNTPVDGLLVEGGRITGVQTGGGVI 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 242 HADTVVIAGGSWSRELAAKMNVSIPLVPGRGYSVT--LEDSPYRlnyPAILV---EGRVAMTPMDgNKLRMGGTMEIT-- 314
Cdd:PRK00711 245 TADAYVVALGSYSTALLKPLGVDIPVYPLKGYSLTvpITDEDRA---PVSTVldeTYKIAITRFD-DRIRVGGMAEIVgf 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 315 STQTPPRlkRVQGILDAVKKFYPEfnvPMPAAD-KIWYGYRPCSADGLPYLGRTRqWKNVVLATGHAMLGLSLGAGTGKL 393
Cdd:PRK00711 321 DLRLDPA--RRETLEMVVRDLFPG---GGDLSQaTFWTGLRPMTPDGTPIVGATR-YKNLWLNTGHGTLGWTMACGSGQL 394
|
410 420
....*....|....*....|..
gi 1354626266 394 VSEVVDERETSMDIRPFNPDRF 415
Cdd:PRK00711 395 LADLISGRKPAIDADDLSVARY 416
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
13-396 |
1.01e-48 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 168.73 E-value: 1.01e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 13 LSSAYYLQAGGHEVTVIDKTDM-SSNCSYGNAGYVCPshftplatpgivkqglkwmWNSKSPFYVQPRLSRSlinwgmqf 91
Cdd:pfam01266 12 LSTAYELARRGLSVTLLERGDDpGSGASGRNAGLIHP-------------------GLRYLEPSELARLALE-------- 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 92 mkaatqqhvedsaiplrdiailSKKMYEEWTALPQFNFAYEHKGLLEIFQTPEGaEHAKHVVEKARELGLtDTALLDYDA 171
Cdd:pfam01266 65 ----------------------ALDLWEELEEELGIDCGFRRCGVLVLARDEEE-EALEKLLAALRRLGV-PAELLDAEE 120
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 172 LQAMEPQTRiNAQGAVFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFENANGnITQLITTNgayHADTVVIAGG 251
Cdd:pfam01266 121 LRELEPLLP-GLRGGLFYPDGGHVDPARLLRALARAAEALGVRIIEGTEVTGIEEEGG-VWGVVTTG---EADAVVNAAG 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 252 SWSRELaAKMNVSIPLVPGRGYSVTLEDSPYRLNYPAILV----EGRVAMTPMDGNKLRMGGTMEITSTQTP-PRLKRVQ 326
Cdd:pfam01266 196 AWADLL-ALPGLRLPVRPVRGQVLVLEPLPEALLILPVPItvdpGRGVYLRPRADGRLLLGGTDEEDGFDDPtPDPEEIE 274
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 327 GILDAVKKFYPEFnvpmPAADKIWYGYRPCsADGLPYLGRTRqWKNVVLATGHAMLGLSLGAGTGKLVSE 396
Cdd:pfam01266 275 ELLEAARRLFPAL----ADIERAWAGLRPL-PDGLPIIGRPG-SPGLYLATGHGGHGLTLAPGIGKLLAE 338
|
|
| thiamin_ThiO |
TIGR02352 |
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine ... |
106-402 |
3.46e-40 |
|
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]
Pssm-ID: 274092 [Multi-domain] Cd Length: 337 Bit Score: 145.97 E-value: 3.46e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 106 PLRDIAILSKKMYEEWTA----LPQFNFAYEHKGLLEIFQTPEGAEHAKHVVEKARELGLtDTALLDYDALQAMEPQTRI 181
Cdd:TIGR02352 42 PLFDLALESLRLYPEWLEalkeLTGLDTGYHQCGTLVVAFDEDDVEHLRQLADLQSATGM-EVEWLSGRALRRLEPYLSG 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 182 NAQGAVFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFENANGNITQLITTNGAYHADTVVIAGGSWSRELaakm 261
Cdd:TIGR02352 121 GIRGAVFYPDDAHVDPRALLKALEKALEKLGVEIIEHTEVQHIEIRGEKVTAIVTPSGDVQADQVVLAAGAWAGEL---- 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 262 nVSIPLVPGRGYSVTLEDSPY-RLNYP--AILVEGRVAMTPMDGNKLRMGGTMEITSTQTPPRLKRVQGILDAVKKFYPE 338
Cdd:TIGR02352 197 -LPLPLRPVRGQPLRLEAPAVpLLNRPlrAVVYGRRVYIVPRRDGRLVVGATMEESGFDTTPTLGGIKELLRDAYTILPA 275
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1354626266 339 F-NVPMpaaDKIWYGYRPCSADGLPYLGRTRQWKNVVLATGHAMLGLSLGAGTGKLVSEVVDERE 402
Cdd:TIGR02352 276 LkEARL---LETWAGLRPGTPDNLPYIGEHPEDRRLLIATGHYRNGILLAPATAEVIADLILGKE 337
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
13-414 |
4.25e-90 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 276.79 E-value: 4.25e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 13 LSSAYYLQAGGHEVTVIDKTDMSSNCSYGNAGYVCPSHFTPlatpgivkqglkwmwnskspfyvqprlsrslinwgmqfm 92
Cdd:COG0665 15 LSTAYHLARRGLDVTVLERGRPGSGASGRNAGQLRPGLAAL--------------------------------------- 55
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 93 kaatqqhvedSAIPLRDIAILSKKMYEEWTALPQFNFAYEHKGLLEIFQTPEGAEHAKHVVEKARELGLtDTALLDYDAL 172
Cdd:COG0665 56 ----------ADRALVRLAREALDLWRELAAELGIDCDFRRTGVLYLARTEAELAALRAEAEALRALGL-PVELLDAAEL 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 173 QAMEPQTRINA-QGAVFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFENANGNITQLITTNGAYHADTVVIAGG 251
Cdd:COG0665 125 REREPGLGSPDyAGGLYDPDDGHVDPAKLVRALARAARAAGVRIREGTPVTGLEREGGRVTGVRTERGTVRADAVVLAAG 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 252 SWSRELAAKMNVSIPLVPGRGYSVTLEDSPYRLNYPaILVEGRVAMTPMDGNKLRMGGTMEITSTQTPPRLKRVQGILDA 331
Cdd:COG0665 205 AWSARLLPMLGLRLPLRPVRGYVLVTEPLPDLPLRP-VLDDTGVYLRPTADGRLLVGGTAEPAGFDRAPTPERLEALLRR 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 332 VKKFYPEF-NVPMPAAdkiWYGYRPCSADGLPYLGRTRQWKNVVLATGHAMLGLSLGAGTGKLVSEVVDERETSMDIRPF 410
Cdd:COG0665 284 LRRLFPALaDAEIVRA---WAGLRPMTPDGLPIIGRLPGAPGLYVATGHGGHGVTLAPAAGRLLADLILGGEPPLDLAPF 360
|
....
gi 1354626266 411 NPDR 414
Cdd:COG0665 361 SPDR 364
|
|
| PRK00711 |
PRK00711 |
D-amino acid dehydrogenase; |
13-415 |
4.47e-56 |
|
D-amino acid dehydrogenase;
Pssm-ID: 234819 [Multi-domain] Cd Length: 416 Bit Score: 190.40 E-value: 4.47e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 13 LSSAYYLQAGGHEVTVIDKTDMSS-NCSYGNAGYVCPSHFTPLATPGIVKQGLKWMWNSKSPFYVQPRLSRSLINWGMQF 91
Cdd:PRK00711 13 VTSAWYLAQAGHEVTVIDRQPGPAlETSFANAGQISPGYAAPWAAPGVPLKAIKWLFQRHAPLAIRPDGDPFQLRWMWQM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 92 MKAATQQHVEDSAIPLRDIAILSKKMYEEWTAlpQFNFAYEH--KGLLEIFQTPEGAEHAKHVVEKARELGlTDTALLDY 169
Cdd:PRK00711 93 LRNCTASRYAVNKSRMVRLAEYSRDCLKALRA--ETGIQYEGrqGGTLQLFRTQQQLDAAAKDIAVLEEAG-VPYELLDR 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 170 DALQAMEPqtrinAQGAVFFRCDAHLY-PN-------KLMQQLIADLKQKGVRIQTNEEVIRFENANGNITQLITTNGAY 241
Cdd:PRK00711 170 DELAAVEP-----ALAGVRHKLVGGLRlPNdetgdcqLFTQRLAAMAEQLGVKFRFNTPVDGLLVEGGRITGVQTGGGVI 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 242 HADTVVIAGGSWSRELAAKMNVSIPLVPGRGYSVT--LEDSPYRlnyPAILV---EGRVAMTPMDgNKLRMGGTMEIT-- 314
Cdd:PRK00711 245 TADAYVVALGSYSTALLKPLGVDIPVYPLKGYSLTvpITDEDRA---PVSTVldeTYKIAITRFD-DRIRVGGMAEIVgf 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 315 STQTPPRlkRVQGILDAVKKFYPEfnvPMPAAD-KIWYGYRPCSADGLPYLGRTRqWKNVVLATGHAMLGLSLGAGTGKL 393
Cdd:PRK00711 321 DLRLDPA--RRETLEMVVRDLFPG---GGDLSQaTFWTGLRPMTPDGTPIVGATR-YKNLWLNTGHGTLGWTMACGSGQL 394
|
410 420
....*....|....*....|..
gi 1354626266 394 VSEVVDERETSMDIRPFNPDRF 415
Cdd:PRK00711 395 LADLISGRKPAIDADDLSVARY 416
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
13-396 |
1.01e-48 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 168.73 E-value: 1.01e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 13 LSSAYYLQAGGHEVTVIDKTDM-SSNCSYGNAGYVCPshftplatpgivkqglkwmWNSKSPFYVQPRLSRSlinwgmqf 91
Cdd:pfam01266 12 LSTAYELARRGLSVTLLERGDDpGSGASGRNAGLIHP-------------------GLRYLEPSELARLALE-------- 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 92 mkaatqqhvedsaiplrdiailSKKMYEEWTALPQFNFAYEHKGLLEIFQTPEGaEHAKHVVEKARELGLtDTALLDYDA 171
Cdd:pfam01266 65 ----------------------ALDLWEELEEELGIDCGFRRCGVLVLARDEEE-EALEKLLAALRRLGV-PAELLDAEE 120
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 172 LQAMEPQTRiNAQGAVFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFENANGnITQLITTNgayHADTVVIAGG 251
Cdd:pfam01266 121 LRELEPLLP-GLRGGLFYPDGGHVDPARLLRALARAAEALGVRIIEGTEVTGIEEEGG-VWGVVTTG---EADAVVNAAG 195
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 252 SWSRELaAKMNVSIPLVPGRGYSVTLEDSPYRLNYPAILV----EGRVAMTPMDGNKLRMGGTMEITSTQTP-PRLKRVQ 326
Cdd:pfam01266 196 AWADLL-ALPGLRLPVRPVRGQVLVLEPLPEALLILPVPItvdpGRGVYLRPRADGRLLLGGTDEEDGFDDPtPDPEEIE 274
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 327 GILDAVKKFYPEFnvpmPAADKIWYGYRPCsADGLPYLGRTRqWKNVVLATGHAMLGLSLGAGTGKLVSE 396
Cdd:pfam01266 275 ELLEAARRLFPAL----ADIERAWAGLRPL-PDGLPIIGRPG-SPGLYLATGHGGHGLTLAPGIGKLLAE 338
|
|
| thiamin_ThiO |
TIGR02352 |
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine ... |
106-402 |
3.46e-40 |
|
glycine oxidase ThiO; This family consists of the homotetrameric, FAD-dependent glycine oxidase ThiO, from species such as Bacillus subtilis that use glycine in thiamine biosynthesis. In general, members of this family will not be found in species such as E. coli that instead use tyrosine and the ThiH protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine]
Pssm-ID: 274092 [Multi-domain] Cd Length: 337 Bit Score: 145.97 E-value: 3.46e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 106 PLRDIAILSKKMYEEWTA----LPQFNFAYEHKGLLEIFQTPEGAEHAKHVVEKARELGLtDTALLDYDALQAMEPQTRI 181
Cdd:TIGR02352 42 PLFDLALESLRLYPEWLEalkeLTGLDTGYHQCGTLVVAFDEDDVEHLRQLADLQSATGM-EVEWLSGRALRRLEPYLSG 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 182 NAQGAVFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFENANGNITQLITTNGAYHADTVVIAGGSWSRELaakm 261
Cdd:TIGR02352 121 GIRGAVFYPDDAHVDPRALLKALEKALEKLGVEIIEHTEVQHIEIRGEKVTAIVTPSGDVQADQVVLAAGAWAGEL---- 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 262 nVSIPLVPGRGYSVTLEDSPY-RLNYP--AILVEGRVAMTPMDGNKLRMGGTMEITSTQTPPRLKRVQGILDAVKKFYPE 338
Cdd:TIGR02352 197 -LPLPLRPVRGQPLRLEAPAVpLLNRPlrAVVYGRRVYIVPRRDGRLVVGATMEESGFDTTPTLGGIKELLRDAYTILPA 275
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1354626266 339 F-NVPMpaaDKIWYGYRPCSADGLPYLGRTRQWKNVVLATGHAMLGLSLGAGTGKLVSEVVDERE 402
Cdd:TIGR02352 276 LkEARL---LETWAGLRPGTPDNLPYIGEHPEDRRLLIATGHYRNGILLAPATAEVIADLILGKE 337
|
|
| PRK12409 |
PRK12409 |
D-amino acid dehydrogenase small subunit; Provisional |
2-400 |
3.55e-34 |
|
D-amino acid dehydrogenase small subunit; Provisional
Pssm-ID: 237093 [Multi-domain] Cd Length: 410 Bit Score: 131.30 E-value: 3.55e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 2 RIVIIGGGIIGLSSAYYLQAGGHEVTVIDKTDMSS-NCSYGNAGYVCPSHFTPLATPGIVKQGLKWMWNSKSPFYVQPRL 80
Cdd:PRK12409 3 HIAVIGAGITGVTTAYALAQRGYQVTVFDRHRYAAmETSFANGGQLSASNAEVWNHWATVLKGLKWMLRKDAPLLLNPKP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 81 SRSLINWGMQFMkaATQQHVEDSAIPLRDIAILSKKMYEEWTALPQFNFAYEHKGLLEIFQTPEGAEHAKHVVEKARELG 160
Cdd:PRK12409 83 SWHKYSWLAEFL--AHIPNYRANTIETVRLAIAARKHLFDIAEREGIDFDLERRGILHIYHDKAGFDHAKRVNALLAEGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 161 LTDTAlLDYDALQAMEPQTRINAQGAVFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFE-NANGNITQLITTNG 239
Cdd:PRK12409 161 LERRA-VTPEEMRAIEPTLTGEYYGGYYTPSDSTGDIHKFTTGLAAACARLGVQFRYGQEVTSIKtDGGGVVLTVQPSAE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 240 AYH----ADTVVIAGGSWSRELAAKMNVSIPLVPGRGYSVT--LEDSPYRLNYP--AILVEGRVAMTPMDG-NKLRMGGT 310
Cdd:PRK12409 240 HPSrtleFDGVVVCAGVGSRALAAMLGDRVNVYPVKGYSITvnLDDEASRAAAPwvSLLDDSAKIVTSRLGaDRFRVAGT 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 311 MEITSTQTPPRLKRVQGILDAVKKFYPEFN----VPmpaadkiWYGYRPCSADGLPYLGRTRQwKNVVLATGHAMLGLSL 386
Cdd:PRK12409 320 AEFNGYNRDIRADRIRPLVDWVRRNFPDVStrrvVP-------WAGLRPMMPNMMPRVGRGRR-PGVFYNTGHGHLGWTL 391
|
410
....*....|....
gi 1354626266 387 GAGTGKLVSEVVDE 400
Cdd:PRK12409 392 SAATADLVAQVVAQ 405
|
|
| LhgO |
COG0579 |
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism]; |
9-302 |
5.35e-12 |
|
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
Pssm-ID: 440344 [Multi-domain] Cd Length: 418 Bit Score: 67.09 E-value: 5.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 9 GIIGLSSAYYL-QAGGHEVTVIDKTDM-----SSNcsygNAGYVcpsHFTPLATPGivkqglkwmwnskspfyvqprlsr 82
Cdd:COG0579 13 GIVGLALARELsRYEDLKVLVLEKEDDvaqesSGN----NSGVI---HAGLYYTPG------------------------ 61
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 83 SLinwgmqfmKAATqqhvedsaiplrdiAILSKKMYEEWTAlpQFNFAYEHKGLLEIFQTPEGAEHAKHVVEKARELGLT 162
Cdd:COG0579 62 SL--------KARL--------------CVEGNELFYELCR--ELGIPFKRCGKLVVATGEEEVAFLEKLYERGKANGVP 117
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 163 DTALLDYDALQAMEPQTRINAQGAVFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFENANGNITqLITTNGAYH 242
Cdd:COG0579 118 GLEILDREELRELEPLLSDEGVAALYSPSTGIVDPGALTRALAENAEANGVELLLNTEVTGIEREGDGWE-VTTNGGTIR 196
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1354626266 243 ADTVVIAGGSWSRELAAKMNVSIP--LVPGRG-YsvtledspYRLNYPAILVEGRVAMTPMDG 302
Cdd:COG0579 197 ARFVINAAGLYADRLAQMAGIGKDfgIFPVKGeY--------LVLDKPAELVNAKVYPVPDPG 251
|
|
| solA |
PRK11259 |
N-methyl-L-tryptophan oxidase; |
209-416 |
3.87e-09 |
|
N-methyl-L-tryptophan oxidase;
Pssm-ID: 236887 [Multi-domain] Cd Length: 376 Bit Score: 57.92 E-value: 3.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 209 KQKGVRIQTNEEVIRFENANGNITqLITTNGAYHADTVVIAGGSWSRELAAKMnvSIPLVPGR----------GYSV--- 275
Cdd:PRK11259 160 REAGAELLFNEPVTAIEADGDGVT-VTTADGTYEAKKLVVSAGAWVKDLLPPL--ELPLTPVRqvlawfqadgRYSEpnr 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 276 ----TLEDSPYRLNY--PAIlvegrvamtpmDGNKLRMG---GTMEITstqTPPRLKR-------VQGILDAVKKFYPEF 339
Cdd:PRK11259 237 fpafIWEVPDGDQYYgfPAE-----------NGPGLKIGkhnGGQEIT---SPDERDRfvtvaedGAELRPFLRNYLPGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 340 NVPMPAAdkiwygyrPCSADGLP----YLGRTRQWKNVVLAT---GHamlGLSLGAGTGKLVSEVVDERETSMDIRPFNP 412
Cdd:PRK11259 303 GPCLRGA--------ACTYTNTPdehfIIDTLPGHPNVLVASgcsGH---GFKFASVLGEILADLAQDGTSDFDLSPFSL 371
|
....
gi 1354626266 413 DRFS 416
Cdd:PRK11259 372 SRFA 375
|
|
| soxA_mon |
TIGR01377 |
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of ... |
115-416 |
1.10e-08 |
|
sarcosine oxidase, monomeric form; Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms [Energy metabolism, Amino acids and amines]
Pssm-ID: 130444 [Multi-domain] Cd Length: 380 Bit Score: 56.76 E-value: 1.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 115 KKMYEEWTALpqfnfayEHKGLLEIF-QT------PEGAEHAKHVVEKARELGLtDTALLDYDALQAMEPQTRI-NAQGA 186
Cdd:TIGR01377 62 LECYQLWAQL-------EKEAGTKLHrQTgllllgPKENQFLKTIQATLSRHGL-EHELLSSKQLKQRFPNIRVpRNEVG 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 187 VFFRCDAHLYPNKLMQQLIADLKQKGVRIQTNEEVIRFENANGNITqLITTNGAYHADTVVIAGGSWSRELAAKMNVSIP 266
Cdd:TIGR01377 134 LLDPNGGVLYAEKALRALQELAEAHGATVRDGTKVVEIEPTELLVT-VKTTKGSYQANKLVVTAGAWTSKLLSPLGIEIP 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 267 LVPGR---GYSVTLEDSPYRLN--YPAILVEGR---VAMTPMDGNKLRMGGTMEITSTQTPPRLKR--------VQGILD 330
Cdd:TIGR01377 213 LQPLRinvCYWREKEPGSYGVSqaFPCFLVLGLnphIYGLPSFEYPGLMKVYYHHGQQIDPDERDCpfgadiedVQILRK 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 331 AVKKFYPEFNVPMPAADKIWYGYRPcsaDGLPYLGRTRQWKNVVLATGHAMLGLSLGAGTGKLVSEVVDERETSMDIRPF 410
Cdd:TIGR01377 293 FVRDHLPGLNGEPKKGEVCMYTNTP---DEHFVIDLHPKYDNVVIGAGFSGHGFKLAPVVGKILAELAMKLKPSYDLAIF 369
|
....*.
gi 1354626266 411 NPDRFS 416
Cdd:TIGR01377 370 SLNRFA 375
|
|
| PRK05329 |
PRK05329 |
glycerol-3-phosphate dehydrogenase subunit GlpB; |
200-252 |
8.33e-07 |
|
glycerol-3-phosphate dehydrogenase subunit GlpB;
Pssm-ID: 235412 Cd Length: 422 Bit Score: 51.00 E-value: 8.33e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 1354626266 200 LMQQLIADLKQKGVRIQTNEEVIRFENANGNITQLITTNGA---YHADTVVIAGGS 252
Cdd:PRK05329 261 LQNALRRAFERLGGRIMPGDEVLGAEFEGGRVTAVWTRNHGdipLRARHFVLATGS 316
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
121-272 |
9.00e-04 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 41.37 E-value: 9.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 121 WTALPQFNFAYEH--KGLLEIfqtpegAEHAKHVV--EKARELGLTDTALLDYDALQAMEpQTRIN-AQGAVFFRCDAHL 195
Cdd:PRK01747 333 YDALPAAGVAFDHdwCGVLQL------AWDEKSAEkiAKMLALGLPAELARALDAEEAEE-LAGLPvPCGGIFYPQGGWL 405
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 196 YPNKLMQQLIAdLKQKGVRIQTNEEVIRFENANGNItQLITTNGA-YHADTVVIAGGSWSRELA--AKMnvsiPLVPGRG 272
Cdd:PRK01747 406 CPAELCRALLA-LAGQQLTIHFGHEVARLEREDDGW-QLDFAGGTlASAPVVVLANGHDAARFAqtAHL----PLYSVRG 479
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
202-289 |
9.42e-04 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 40.76 E-value: 9.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1354626266 202 QQLIADLKQKGVRIQTNEEVIRFENANGNITQLITTNGAYHADTVVIA-GGSWSRELAAKMNVsipLVPGRGYSVTleDS 280
Cdd:pfam07992 197 AALEKALEKNGVEVRLGTSVKEIIGDGDGVEVILKDGTEIDADLVVVAiGRRPNTELLEAAGL---ELDERGGIVV--DE 271
|
....*....
gi 1354626266 281 PYRLNYPAI 289
Cdd:pfam07992 272 YLRTSVPGI 280
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
203-251 |
1.32e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 40.28 E-value: 1.32e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1354626266 203 QLIADLKQkgVRIQTNEEVIRFENANGNITqLITTNGAYHADTVVIAGG 251
Cdd:pfam13738 82 RRVADHFE--LPINLFEEVTSVKKEDDGFV-VTTSKGTYQARYVIIATG 127
|
|
| PRK09564 |
PRK09564 |
coenzyme A disulfide reductase; Reviewed |
204-251 |
1.83e-03 |
|
coenzyme A disulfide reductase; Reviewed
Pssm-ID: 181958 [Multi-domain] Cd Length: 444 Bit Score: 40.41 E-value: 1.83e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 1354626266 204 LIADLKQKGVRIQTNEEVIRFEnANGNITQLITTNGAYHADTVVIAGG 251
Cdd:PRK09564 197 MEEELRENGVELHLNEFVKSLI-GEDKVEGVVTDKGEYEADVVIVATG 243
|
|
| PTZ00383 |
PTZ00383 |
malate:quinone oxidoreductase; Provisional |
206-263 |
3.17e-03 |
|
malate:quinone oxidoreductase; Provisional
Pssm-ID: 240393 [Multi-domain] Cd Length: 497 Bit Score: 39.72 E-value: 3.17e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 1354626266 206 ADLKQKGVRIQTNEEVIRFENANGNITQLITTNGAYHADTVVIAGGSWSRELAAKMNV 263
Cdd:PTZ00383 225 ALVPGKKISINLNTEVLNIERSNDSLYKIHTNRGEIRARFVVVSACGYSLLFAQKMGY 282
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
200-252 |
4.41e-03 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 38.95 E-value: 4.41e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 1354626266 200 LMQQLIADLKQKGVRIQTnEEVIRFENANGNITqLITTNGA-YHADTVVIAGGS 252
Cdd:COG0492 59 LAERLREQAERFGAEILL-EEVTSVDKDDGPFR-VTTDDGTeYEAKAVIIATGA 110
|
|
| |
