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Conserved domains on  [gi|1359379832|gb|PRT47623|]
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competence protein ComG [Bacillus wiedmannii]

Protein Classification

ComZ family protein( domain architecture ID 10566747)

ComZ family protein similar to Bacillus subtilis ComZ (also known as YjzA) which negatively regulates the transcription of the comG operon

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ComZ pfam10815
ComZ; ComZ is part of a two gene operon. It affects competence regulation by negatively ...
 3-57 2.95e-20

ComZ; ComZ is part of a two gene operon. It affects competence regulation by negatively affecting the transcription of the ComG operon. ComZ contains a leucine zipper motif.


:

Pssm-ID: 313911  Cd Length: 55  Bit Score: 74.79  E-value: 2.95e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1359379832  3 EKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMNEAYELGKADK 57
Cdd:pfam10815  1 EKSMEFMQIAMKHLPEAKAELEKKGIELSMEELQPFLSLLTKVMNEAYELGKADA 55
 
Name Accession Description Interval E-value
ComZ pfam10815
ComZ; ComZ is part of a two gene operon. It affects competence regulation by negatively ...
 3-57 2.95e-20

ComZ; ComZ is part of a two gene operon. It affects competence regulation by negatively affecting the transcription of the ComG operon. ComZ contains a leucine zipper motif.


Pssm-ID: 313911  Cd Length: 55  Bit Score: 74.79  E-value: 2.95e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1359379832  3 EKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMNEAYELGKADK 57
Cdd:pfam10815  1 EKSMEFMQIAMKHLPEAKAELEKKGIELSMEELQPFLSLLTKVMNEAYELGKADA 55
 
Name Accession Description Interval E-value
ComZ pfam10815
ComZ; ComZ is part of a two gene operon. It affects competence regulation by negatively ...
 3-57 2.95e-20

ComZ; ComZ is part of a two gene operon. It affects competence regulation by negatively affecting the transcription of the ComG operon. ComZ contains a leucine zipper motif.


Pssm-ID: 313911  Cd Length: 55  Bit Score: 74.79  E-value: 2.95e-20
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1359379832  3 EKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMNEAYELGKADK 57
Cdd:pfam10815  1 EKSMEFMQIAMKHLPEAKAELEKKGIELSMEELQPFLSLLTKVMNEAYELGKADA 55
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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