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Conserved domains on  [gi|1382723809|gb|PUZ10825|]
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molecular chaperone [Cronobacter sakazakii]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK15285 super family cl33121
fimbrial chaperone StfD;
1-243 7.41e-89

fimbrial chaperone StfD;


The actual alignment was detected with superfamily member PRK15285:

Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 263.56  E-value: 7.41e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   1 MLTMNKTIFAAALAL--SGVMATQqafAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIEDAQGNKITSPLNVL 78
Cdd:PRK15285    1 MMPLKRYNLAAVLLLllGGYGSAQ---AAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVV 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  79 PPVQRVEAGAKSQVKVQASPAIASLPQDRETLFYFNLREIPPRSNKPNTLQIALQTRIKLFYRPKAIA-LDktqaAQGDW 157
Cdd:PRK15285   78 PPVQRIEPSAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSkID----MQHPW 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 158 VEKVTLTRQGDKFMVNNPTPYFLTIVEGATGVKGKTV-GFEPVMVSPKSSATIEASAAAFGNNPVLTYVNDYGGRPHLQF 236
Cdd:PRK15285  154 QYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPArGFSPLVIAPKSNVTLGGDASELGHSPVLTYVNDYGARLPLIF 233


                  ....*..
gi 1382723809 237 ACSGTTC 243
Cdd:PRK15285  234 NCTDNSC 240
 
Name Accession Description Interval E-value
PRK15285 PRK15285
fimbrial chaperone StfD;
1-243 7.41e-89

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 263.56  E-value: 7.41e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   1 MLTMNKTIFAAALAL--SGVMATQqafAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIEDAQGNKITSPLNVL 78
Cdd:PRK15285    1 MMPLKRYNLAAVLLLllGGYGSAQ---AAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVV 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  79 PPVQRVEAGAKSQVKVQASPAIASLPQDRETLFYFNLREIPPRSNKPNTLQIALQTRIKLFYRPKAIA-LDktqaAQGDW 157
Cdd:PRK15285   78 PPVQRIEPSAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSkID----MQHPW 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 158 VEKVTLTRQGDKFMVNNPTPYFLTIVEGATGVKGKTV-GFEPVMVSPKSSATIEASAAAFGNNPVLTYVNDYGGRPHLQF 236
Cdd:PRK15285  154 QYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPArGFSPLVIAPKSNVTLGGDASELGHSPVLTYVNDYGARLPLIF 233


                  ....*..
gi 1382723809 237 ACSGTTC 243
Cdd:PRK15285  234 NCTDNSC 240
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-231 5.74e-77

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 232.57  E-value: 5.74e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   4 MNKTIFAAALALSGVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIEDAQGN----KITSPLNVLP 79
Cdd:COG3121     1 MKRLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQDagpdKATAPFVVTP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  80 PVQRVEAGAKSQVKVQASPaiASLPQDRETLFYFNLREIPPR---SNKPNTLQIALQTRIKLFYRPKAIALDKTQAAqgd 156
Cdd:COG3121    80 PLFRLEPGKSQTVRIIRTG--PPLPQDRESLFRLNVDEIPPKdasEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAA--- 154

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1382723809 157 wvEKVTLTRQGDKFMVNNPTPYFLTIVEGATGVKGKTVGFEPVMVSPKSSATIEASAAAF---GNNPVLTYVNDYGGR 231
Cdd:COG3121   155 --EKLTWSLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASlaaGGKVTWATINDYGGA 230
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 28-146 4.85e-45

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 147.35  E-value: 4.85e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  28 IALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIEDAQGN----KITSPLNVLPPVQRVEAGAKSQVKVQASPAiaSL 103
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEEgtdeKAKAPFIVTPPLFRLEPGQEQVLRIYTTGP--PL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1382723809 104 PQDRETLFYFNLREIPPRSNKP---NTLQIALQTRIKLFYRPKAIA 146
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKggqNGLQLALRSRIKLFYRPAGLA 123
 
Name Accession Description Interval E-value
PRK15285 PRK15285
fimbrial chaperone StfD;
1-243 7.41e-89

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 263.56  E-value: 7.41e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   1 MLTMNKTIFAAALAL--SGVMATQqafAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIEDAQGNKITSPLNVL 78
Cdd:PRK15285    1 MMPLKRYNLAAVLLLllGGYGSAQ---AAIAPDRTRLVFRGEDKSISVDLKNANSKLPYLAQSWVEDEKGVKITSPLIVV 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  79 PPVQRVEAGAKSQVKVQASPAIASLPQDRETLFYFNLREIPPRSNKPNTLQIALQTRIKLFYRPKAIA-LDktqaAQGDW 157
Cdd:PRK15285   78 PPVQRIEPSAIGQVKIQGMPALASLPQDRETLFYYNVREIPPQSDKPNTLQIALQTRIKVFYRPQALSkID----MQHPW 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 158 VEKVTLTRQGDKFMVNNPTPYFLTIVEGATGVKGKTV-GFEPVMVSPKSSATIEASAAAFGNNPVLTYVNDYGGRPHLQF 236
Cdd:PRK15285  154 QYKITLQRQGNGYQVSNPTGYYVVLSNASNRMDGTPArGFSPLVIAPKSNVTLGGDASELGHSPVLTYVNDYGARLPLIF 233


                  ....*..
gi 1382723809 237 ACSGTTC 243
Cdd:PRK15285  234 NCTDNSC 240
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 4-243 3.08e-79

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 239.30  E-value: 3.08e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   4 MNKTIF---AAALALSGVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIEDAQGNKITSPLNVLPP 80
Cdd:PRK15274    1 MNKTNHfkrQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  81 VQRVEAGAKSQVKVQASPAIASLPQDRETLFYFNLREIPPRSNKPNTLQIALQTRIKLFYRPKAIA--LDKTQAaqgdWV 158
Cdd:PRK15274   81 LQRIEPKSDGQVKVQPLPAAASLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVArqVDKTHP----WQ 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 159 EKVTLTRQGDKFMVNNPTPYFLTIVEGATGVKGKTVGFEPVMVSPKSSATIEASAAAFGNNPVLTYVNDYGGRPHLQFAC 238
Cdd:PRK15274  157 TKLTLTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTC 236


                  ....*
gi 1382723809 239 SGTTC 243
Cdd:PRK15274  237 SGNTC 241
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
4-231 5.74e-77

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 232.57  E-value: 5.74e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   4 MNKTIFAAALALSGVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIEDAQGN----KITSPLNVLP 79
Cdd:COG3121     1 MKRLLRLLLLALLLLLASAAAAAGISISPTRVIYPAGDKEASLTLTNTGDT-PYLVQSWVDDWDQDagpdKATAPFVVTP 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  80 PVQRVEAGAKSQVKVQASPaiASLPQDRETLFYFNLREIPPR---SNKPNTLQIALQTRIKLFYRPKAIALDKTQAAqgd 156
Cdd:COG3121    80 PLFRLEPGKSQTVRIIRTG--PPLPQDRESLFRLNVDEIPPKdasEEGKNTLQIALRTRIKLFYRPAGLKGSPEDAA--- 154

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1382723809 157 wvEKVTLTRQGDKFMVNNPTPYFLTIVEGATGVKGKTVGFEPVMVSPKSSATIEASAAAF---GNNPVLTYVNDYGGR 231
Cdd:COG3121   155 --EKLTWSLVGNGLTVTNPGPYYVTLSDLSLGAGGKKLKKGLGMVLPGSTRRWPLPAGASlaaGGKVTWATINDYGGA 230
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 21-246 3.66e-54

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 174.58  E-value: 3.66e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  21 TQQAFAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIEDAQGNKiTSPLNVLPPVQRVEAGAKSQVKV-QASPA 99
Cdd:PRK15254   11 SQYSPAAVNVDRTRIIMDAPQKTVAITLNNDDKTTPFLAQSWVTDADGVR-TDALMALPPLQRIDAGQKSQVRItQVRGL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 100 IASLPQDRETLFYFNLREIPPRSNKPNTLQIALQTRIKLFYRPKAIALDKTQAAQgdwvEKVTLTRQGDKFMVNNPTPYF 179
Cdd:PRK15254   90 TDKLPQDRETLFWFNVRGVPPKPEDDNVLQLAMQSQLKLFYRPKAIIRSSSDQPE----RKLTAERNAGHLTLRNPTPYY 165

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1382723809 180 LTIVEGATGVKGKTVGF-EPVMVSPKSSATIEASAAAFGNNPVLTYVNDYGGRPHLQFACSGTTCTAK 246
Cdd:PRK15254  166 ITVAWLGADRSHRLSGFrEGVMVPPLGSLPLKAVLPAETRTLWVGYIDDYGGLQMNRYACDALNCAFK 233
PRK09926 PRK09926
fimbrial chaperone;
5-230 6.85e-48

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 158.73  E-value: 6.85e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   5 NKTIFAAALALSGVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIEDAQGN----KITSPLNVLPP 80
Cdd:PRK09926    4 NTKHTTALCFATCMAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNN-PLLVQSWLDTGDDNaepgSIKVPFTATPP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  81 VQRVEAGAKSQVKVQASpAIASLPQDRETLFYFNLREIPPRSNKP-----NTLQIALQTRIKLFYRPKAIALDKTQA-AQ 154
Cdd:PRK09926   83 VSRIDPKRGQTIKLMYT-ASTALPKDRESVFWFNVLEVPPKPDAEkvanqSLLQLAFRTRIKLFYRPDGLKGNPSEApLA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 155 GDWvekvTLTRQGDK--FMVNNPTPYFLTIVEGATGVKGKTVGFEPVMVSPKSSA--TIEASAAAFGNNPVLTY-VNDYG 229
Cdd:PRK09926  162 LKW----SWAGSEGKasLRVTNPTPYYVSFSSGDLEAGGKRYPVDSKMIAPFSDEsmKVKGLSGKASSGKVHFYaINDFG 237


                  .
gi 1382723809 230 G 230
Cdd:PRK09926  238 G 238
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 28-146 4.85e-45

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 147.35  E-value: 4.85e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  28 IALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIEDAQGN----KITSPLNVLPPVQRVEAGAKSQVKVQASPAiaSL 103
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDN-PYLVQSWVDDGNEEgtdeKAKAPFIVTPPLFRLEPGQEQVLRIYTTGP--PL 77

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1382723809 104 PQDRETLFYFNLREIPPRSNKP---NTLQIALQTRIKLFYRPKAIA 146
Cdd:pfam00345  78 PTDRESLFWLNVLEIPPKDKPKggqNGLQLALRSRIKLFYRPAGLA 123
lfpB PRK15290
fimbrial chaperone;
2-229 2.73e-41

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 141.67  E-value: 2.73e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   2 LTMNKTIFAAALALSGVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIED-AQGNKITSPLNVLPP 80
Cdd:PRK15290   13 TTVSCKLFTAIILSVFLGQPALTYAGVVIGGTRVVYLSNNPDKSISVFSKEEKIPYLIQAWVDPfNKEDKSKAPFTVIPP 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  81 VQRVEAGAKSQVKVQASPAIaSLPQDRETLFYFNLREIPPR-SNK-PNTLQIALQTRIKLFYRPKAIALDKTQAAqgdwv 158
Cdd:PRK15290   93 VSRLEPSQEKVLRIIHTKGV-SLPDDRESVFWLNIKNIPPSaSNKaTNSLEIAVKTRIKLFWRPASIRLIPEDAA----- 166

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1382723809 159 EKVTLTRQGDKFMVNNPTPYFLTIVEgaTGVKGKTVGFEpvMVSPKSSATIEASAAAFGNNPVLTYVNDYG 229
Cdd:PRK15290  167 PKVKWRREGRNLIAENPNPIHISVMD--VIVDGHDVPLN--MIRPFETLTLPLPANSAGGQMTWRFINDYG 233
PRK15208 PRK15208
molecular chaperone LpfB;
6-229 5.74e-37

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 130.03  E-value: 5.74e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   6 KTIFAAALALSgvMATQQAFAA-IALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIEDAQGNKITsPLNVLPPVQRV 84
Cdd:PRK15208    2 RLISFTALALA--LIAQNSFAGgVALSSTRVIYDGSKKEASLTVNNKSKTEEFLIQSWIDDANGNKKT-PFIITPPLFKL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  85 EAGAKSQVK-VQASPaiaSLPQDRETLFYFNLREIPPRSNK---PNTLQIALQTRIKLFYRPKAIALDKTQAAQgdwveK 160
Cdd:PRK15208   79 DPTKNNVLRiVNITN---TLPQDRESVYWINVKAIPAKSEDaenKNVLQIAVRTRLKLFYRPAGLKGNSMDAWN-----K 150

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1382723809 161 VTLTRQGDKFMVNNPTPYFLTIVE-GATGVKGKTVGfepvMVSPKSSATIEASAAAfGNNPVLTY--VNDYG 229
Cdd:PRK15208  151 LRFTRAGNQIKVENPSAFNLTFNQfYANGRDIEKAG----MVPAKGSLNIELPAGT-GKVSEVKYniINDFG 217
PRK15195 PRK15195
molecular chaperone FimC;
1-229 9.50e-36

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 126.90  E-value: 9.50e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   1 MLTMNKTIFAAALALSgVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIEDAQGNK-----ITSPL 75
Cdd:PRK15195    1 MMTKIKLGMIIIFYLI-ISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNERYLVNSWIENSSGVKeksfiVTPPL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  76 NVLPPvqrveagaKSQVKVQASPAIASLPQDRETLFYFNLREIPP----RSNKPNTLQIALQTRIKLFYRPKAIALDKTQ 151
Cdd:PRK15195   80 FVSEP--------KSENTLRIIYAGPPLAADRESLFWMNVKAIPSvdknALEGRNVLQLAILSRIKLFVRPINLQELPEE 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 152 AaqgdwVEKVTLTRQGDKFMVNNPTPYFLTIVEGATGvkGKTVGfePVMVSPKSSATIEASAAAFGNnpvLTY--VNDYG 229
Cdd:PRK15195  152 A-----PDTLKFSRSGNHLKVHNPSPYYVTLVNLQVG--SQKLG--NAMIAPKVNSQIPLPSGVQGK---LKFqtVNDYG 219
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 26-230 1.22e-33

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 121.43  E-value: 1.22e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  26 AAIALDRTRVVYNGEEKSISLSISNeNKNLPYLAQAWIEDAQ--GNKITSPLNVLPPVQRVEAGAKSQVKVQASPAiaSL 103
Cdd:PRK15299   22 AGINIGTTRVIFHGDAKDASISISN-SDNVPYLIQSWAQSISetGASGDAPFMVTPPLFRLNGGQKNVLRIIRTGG--NL 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 104 PQDRETLFYFNLREIPPRS--NKPNTLQIALQTRIKLFYRPKAIALDKTQAAqgdwvEKVTLTRQGDKFMVNNPTPYFL- 180
Cdd:PRK15299   99 PEDRESLYWLDIKSIPSSNpdNKHNTLMLAVKAEFKLIYRPKALTQKPEEVA-----DRLTWSRQGRTLTVKNPTPYYMn 173

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1382723809 181 --TIVEGATGVKGktvgfePVMVSPKSSATIEASAAAFGnnPVL-TYVNDYGG 230
Cdd:PRK15299  174 faTLSVGSQKVKA------PRYVAPFGNAQYTLPAAASG--PIAwSIINDFGG 218
PRK15211 PRK15211
fimbrial chaperone;
4-231 2.52e-31

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 115.30  E-value: 2.52e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   4 MNKTIFAAALALSgVMATQQAFAAIALDRTRVVYNGEEKSISLSISNeNKNLPYLAQAWIEDAQGNKITSPLNVLPPVQR 83
Cdd:PRK15211    1 NKMMKWGLVSLLS-LAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTN-QADQTYGGQVWIDNTTQGSSTVYMVPAPPFFK 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  84 VEAGAKSQVKVQASPAiaSLPQDRETLFYFNLREIP--PRSNKPNTLQIALQTRIKLFYRPKAIALDKTQAAQgdwveKV 161
Cdd:PRK15211   79 VRPKEKQIIRIMKTDS--ALPKDRESLFWLNVQEIPpkPKASEGNVLAVALNTQVKLIYRPKALKEGRENAEK-----NL 151

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1382723809 162 TLTRQGDKFMVNNPTPYFLTIvegaTGVK--------GKTVGFEPVMVSPKSSATIEASAAafGNNPVLTYVNDYGGR 231
Cdd:PRK15211  152 QIIHRGGETYLKNPTPYYFAV----TGVKlngqpvklSDRVMNEIAQLAPFSEVSLGKLSL--NGTVTVQAVNDWGGT 223
PRK15249 PRK15249
fimbrial chaperone;
19-231 4.03e-31

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 115.28  E-value: 4.03e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  19 MATQQAFAAIALDRTRVVYNGEEKSISLSISNeNKNLPYLAQAWIEDaqGNKITSPLN-------VLPPVQRVEAGAKSQ 91
Cdd:PRK15249   21 LPATASWASVTILGSRIIYPSTASSVDVQLKN-NDAIPYIVQTWFDD--GDMNTSPENssampfiATPPVFRIQPKAGQV 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  92 VKVQASPAiASLPQDRETLFYFNLREIPP----RSNKPNTLQIALQTRIKLFYRPKAIALDKTQAAQGDwVEKVTLTRQG 167
Cdd:PRK15249   98 VRVIYNNT-KKLPQDRESVFWFNVLQVPPtnigSDSGQNKMLVMLRSRIKLFYRPDGLGKPDNLAKKLQ-IKTVNKGSGK 175

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1382723809 168 DKFMVNNPTPYFLTIVEGATGVKGKTVGFEPVMVSPKSSATIEASAA----AFGNNPVLTYVNDYGGR 231
Cdd:PRK15249  176 SGIVIVNPQPWFASLSNLNVKVNGASYNLDADMIAPFSSQTWWLPGKrslkSFSGTVTVTLVNDQGAR 243
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 4-229 2.11e-29

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 110.53  E-value: 2.11e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   4 MNKTIFAAALALSGVMAtqqAFAAIALDRTRVVYNGEEKSISLSISNENKNLPyLAQAWIEDAQGN----KITSPLNVLP 79
Cdd:PRK15253   14 VNMKILSAVLLSAIILP---AHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQAS-LVQSWIDDGNTSlppeKIQVPFMLTP 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  80 PVQRVEAGAKSQVKVQASPAiaSLPQDRETLFYFNLREIPPRSNK---PNTLQIALQTRIKLFYRPKAIAldktqAAQGD 156
Cdd:PRK15253   90 PVARVAAESGQQIKIKKMPN--SLPDNKESLFYLNVLDIPPNSQEnagKNVLKFAMQNRIKLIWRPSRIA-----AVTKD 162

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1382723809 157 WVEKVTLTRQGDKFMVNNPTPYFLTIVE---GATGVKGKTvgfepVMVSPKSSATIEASAAAFGNNPVlTYVNDYG 229
Cdd:PRK15253  163 SFQRIGLFRSNKTVIMKNDTANWITVTDvkaGNTKINDQT-----IMLPPLSTQNINMKYASTSQYEV-TIIDDNG 232
PRK15218 PRK15218
fimbrial assembly chaperone;
12-229 3.27e-29

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 109.69  E-value: 3.27e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  12 ALALSGvmATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIEDAQGN----KITSPLNVLPPVQRVEAG 87
Cdd:PRK15218    6 ALCLAC--AAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKR-SSLIQAWIDNGDTSlppeKLQVPFIMTPPVIRVAAN 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  88 AKSQVKVQAspAIASLPQDRETLFYFNLREIPPRSNK---PNTLQIALQTRIKLFYRPKAI-ALDKTQaaqgdwVEKVTL 163
Cdd:PRK15218   83 SGQQLKIKK--LANNLPGDRESLFYLNVLDIPPNSDEnkdKNIIKFALQNRIKLIYRPPGVqKVDKAT------FSRLQL 154

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1382723809 164 TRQGDKFMVNNPTPYFLTIVEgatgVKGKT-VGFEPVMVSPKSSATIEASAAAfgNNPVLTYVNDYG 229
Cdd:PRK15218  155 LRAPGSISVKNNSANWITIPE----IKAKSkVNKETLLLAPWSSQSITTTVVV--NSYTVTLIDDSG 215
PRK15295 PRK15295
fimbrial assembly chaperone;
12-233 2.84e-28

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 107.34  E-value: 2.84e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  12 ALALSGVMATQQ-AFAAIALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIE--DAQG-NKITspLNVLPPVQRVEAG 87
Cdd:PRK15295    4 KKSVLVVLLTSHvAHASIVVGGTRLVFDGNNDESSINVENKDSK-ANLVQSWLSvvDPQVtNKQA--FIITPPLFRLDAG 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  88 AKSQVKVQASPAiaSLPQDRETLFYFNLREIPPRSNKP--NTLQIALQTRIKLFYRPKAIALDKTQAaqgdWVEKVTLTR 165
Cdd:PRK15295   81 QKNSIRVIRSGA--PLPADRESMYWLNIKGIPSIDDNAsaNRVEISINTQIKLIYRPPALTKSTPDS----QSQQLKWQT 154

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1382723809 166 QGDKFMVNNPTPY---FLTIVEGATGVKGKTvgfepvMVSPKSSATIEASAAAFGNNPVL-TYVNDYG--GRPH 233
Cdd:PRK15295  155 AGDVITVNNPTPYymnFASVTLNSHEVKSAT------FVPPKSSASFKLGSTAAPHGTVTwRLISDYGmsLEPH 222
PRK15246 PRK15246
fimbrial assembly chaperone;
19-229 9.18e-26

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 100.81  E-value: 9.18e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  19 MATQQAFAAIALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIE----DAQGNKITSPLNVLPPVQRVEAGAKSQVKV 94
Cdd:PRK15246    3 GWYGPAQAAVNIDRTRIIFASDDVAQSLTLSNDNTT-PMLLQVWTDagniDASPDNSKTPLVALPPVFKMQPGELRTLRL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  95 QASpAIASLPQDRETLFYFNLREIPPRS----NKPNTLQIALQTRIKLFYRPKAIALDKTQAAQgdwveKVTLTRQGDKF 170
Cdd:PRK15246   82 LLS-SRQQLATDRESLFWLNIYQIPPVTqdikNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEK-----KLRFIAKENTI 155

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 171 MVNNPTPYFLTIveGATGVKGKTVGfePVMVSPKSSATIEASAA-AFGNNPVLTYVNDYG 229
Cdd:PRK15246  156 RIVNPTSWYMSL--TLTMDNKKSIG--DIMVAPKTALDVPLTRSpTPGASINYAVINDSG 211
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 13-230 5.75e-21

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 87.90  E-value: 5.75e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  13 LALSGVMATQQAfAAIALDRTRVVYNGEEKSISLSISNENKNLPYLAQAWIEDAQGNKITSPLnVLPPVQRVEAGAKSQV 92
Cdd:PRK15188   15 LSAAGLSFAAQA-GGIALGATRVIYPQGSKQTSLPIINSSASNVFLIQSWVANADGSRSTDFI-ITPPLFVIQPKKENIL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  93 KVQ-ASPaiaSLPQDRETLFYFNLREIPPRSNKP---NTLQIALQTRIKLFYRPKAIALDKTQAAQgdwveKVTLTRQGD 168
Cdd:PRK15188   93 RIMyVGP---SLPTDRESVFYLNSKAIPSVDKNKltgNSLQIATQSVIKLFIRPKNLAEAPAHAPS-----TLRCRNERG 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1382723809 169 KFMVNNPTPYFLTIVEGATGVKgktvGFEPVMVSPKSSATIEASAAAFGnnpvLTYVNDYGG 230
Cdd:PRK15188  165 QLTITNPSPYYVSMVELYSAGK----KLPNTMVPPKGAITLPATPGQVS----LRTVNDFGA 218
PRK15224 PRK15224
pili assembly chaperone PapD;
4-233 3.19e-20

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 86.34  E-value: 3.19e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   4 MNKTIFAAALALSGVMATQQAFAA-----IALDRTRVVYNGEEKSISLSISNEnKNLPYLAQAWIEDAQGNKiTSPLNVL 78
Cdd:PRK15224    1 MAAVLFVSNSITPVYAAEQKLNLNtksfsVKLGATRVIYHAGTAGATLSVSNP-QNYPILVQSSVKAADKSS-PAPFLVM 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  79 PPVQRVEAGAKSQVKVQASPAiaSLPQDRETLFYFNLREIPPRSNKPNT--------LQIALQTRIKLFYRPKAI-ALDK 149
Cdd:PRK15224   79 PPLFRLEANQQSQLRIVRTGG--DMPTDRETLQWVCIKAVPPENEPSDTqakgatldLNLSINVCDKLIFRPDAVkGTPE 156

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 150 TQAAQGDWVEkvtltrQGDKFMVNNPTPYFLTIVEGATGVKGKTvGFEpvMVSPKSSATIEASAAAFGNNPvLTYVNDYG 229
Cdd:PRK15224  157 DVAGNLRWVE------TGNKLKVENPTPFYMNLASVTVGGKPIT-GLE--YIPPFADKTLNMPGSAHGDIE-WRVITDFG 226


                  ....
gi 1382723809 230 GRPH 233
Cdd:PRK15224  227 GESH 230
PRK15233 PRK15233
fimbrial chaperone SefB;
23-188 1.91e-16

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 76.30  E-value: 1.91e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  23 QAFAAIALDRTRVVYNGEEKSISLSISNEnKNLPYLAQAWI-EDAQGNKitSPLNVLPPVQRVEAGAKSQVKVqaSPAIA 101
Cdd:PRK15233   37 QKYYGLRLGTTRVIYKEDAPSTSFWIMNE-KEYPILVQTQVyNDDKSSK--APFIVTPPILKVESNARTRLKV--IPTSN 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809 102 SLPQDRETLFYFNLREIPP----RSNKPNTLQIALQTR------IKLFYRPKAIALDKTQAAqgdwvEKVTLTRQGDKFM 171
Cdd:PRK15233  112 LFNKNEESLYWLCVKGVPPlndnESNNKNNITTNLNVNvvtnscIKLIYRPKTIDLTTMEIA-----DKLKLERKGNSIV 186

                         170
                  ....*....|....*..
gi 1382723809 172 VNNPTPYFLTIVEGATG 188
Cdd:PRK15233  187 IKNPTSSYVNIANIKSG 203
PRK11385 PRK11385
fimbrial chaperone;
13-230 3.22e-15

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 72.47  E-value: 3.22e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  13 LALSGVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKnlpylaQAWIEDAQGNKIT-----------SPLNVLPPV 81
Cdd:PRK11385   13 FAVLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQ------ESWLINSKINRPTrwaggeastvpAPLLAAPPL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  82 QRVEAGAKSQVKVQASPAiASLPQDRETLFYFNLREIPPRSNKPNTLQIALQTRIKLFYRPKAIALDKTQAAQgdwveKV 161
Cdd:PRK11385   87 ILLKPGTTGTLRLLRTES-DILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPGDPLEAYQ-----QL 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1382723809 162 TLTRQGDKFMVNNPTPYFLTIVEgaTGVKGKTVGFEPVmVSPKSSATIEASAAAFGNNPVLTYVNDYGG 230
Cdd:PRK11385  161 RWTRNSQGVQLTNPTPYYINLIQ--VSVNGKALSNAGV-VPPKSQRQTSWCQAIAPCHVAWRAINDYGG 226
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 172-231 3.30e-15

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 68.06  E-value: 3.30e-15
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1382723809 172 VNNPTPYFLTIVEGATGVKGKTVGFEPVMVSPKSSATIEA-SAAAFGNNPVLTYVNDYGGR 231
Cdd:pfam02753   1 VKNPTPYYVTFSSLSLGGGGKELALDPGMVAPFSSQTFAGlPAPAAGGTVSYTYINDYGGI 61
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
4-182 1.84e-12

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 64.72  E-value: 1.84e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   4 MNKTIFAAALALSgVMATQQAFAAIALDRTRVVYNGEEKSISLSISNENKnlpylaQAWIEDA-------------QGNk 70
Cdd:PRK15192    1 MNKFFLRCAIYWC-LLPISWAQAGVVIGGTRFIYHAGAPALSVPVSNHSE------ASWLIDThilpggrwpgtknEGN- 72

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  71 iTSPLNVLPPVQRVEAGAKSQVKVQASPAiaSLPQDRETLFYFNLREIPPRSNKPNTLQIALQTRIKLFYRPKAIALDKT 150
Cdd:PRK15192   73 -ITPFVVTPPLFMLSARQENSMRVVYTGA--PLPADRESLFTLSIAAIPSGKPEANRVQMAFRSALKLLYRPEGLAGNPQ 149

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1382723809 151 QAAQgdwveKVTLTRQGDKFMVNNPTPYFLTI 182
Cdd:PRK15192  150 QAYR-----HLIWSLTPDGATVRNPTPYYVTL 176
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 8-178 4.40e-08

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 52.35  E-value: 4.40e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809   8 IFAAALALSGVMATQQAfaAIALDRTRVVYNGEEKSISLSISNENKNlPYLAQAWIEDAQGNKiTSPLNVLPPVQRVEAG 87
Cdd:PRK09918    8 LFTALVLLSSSSAVHAA--GMVPETSVVIVEESDGEGSINVKNTDSN-PILLYTTLVDLPEDK-SKLLLVTPPVARVEPG 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382723809  88 AKSQVK-VQASPAiaslPQDRETLFYFNLREIPPRSNKPNTLQIALQTRIKLFYRPKAIALDKTQaaqgdWvEKVTLTRQ 166
Cdd:PRK09918   84 QSQQVRfILKSGS----PLNTEHLLRVSFEGVPPKPGGKNKVVMPIRQDLPVLIQPAALPVVRDP-----W-KLLVWSIS 153

                         170
                  ....*....|..
gi 1382723809 167 GDKFMVNNPTPY 178
Cdd:PRK09918  154 GNNLVVSNPSPY 165
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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